Kinetics and mechanism of the chromic oxidation of 3-O-methyl-d-glucopyranose

The oxidation of 3-O-methyl-d-glucopyranose (Glc3Me) by Cr^VI in acid medium yields Cr^III, formic acid and 2-O-methyl-d-arabinose as final products when a 50-times or higher excess of Glc3Me over Cr^VI is used. The redox reaction takes place through the combination of Cr^VI → Cr^IV → Cr^II and Cr^VI → Cr^IV → Cr^III pathways. Intermediacy of free radicals and Cr^II in the reaction was demonstrated by the observation of induced polymerization of acrylamide and detection of CrO₂²⁺ formed by reaction of Cr^II with O₂. Intermediate oxo-Cr^V–Glc3Me species were detected by EPR spectroscopy. In 0.3–0.5 mol/L HClO₄, intermediate Cr^V rapidly decompose to the reaction products, while, at pH 5.5–7.5, where the redox processes are very slow, five-coordinate Cr^V bis-chelates of the pyranose and furanose forms of Glc3Me remain more than 15 h in solution. The C1–C2 bond cleavage of Glc3Me upon reaction with Cr^VI distinguishes this derivative from glucose, which is oxidized to gluconic acid.     

2-Hydroxy-2-oxo-1,4,2-oxa-aza-phospha(V) cyclohexane-4-methylene phosphonic acid (OAPhMPh): its structure and symmetry by vibrational spectroscopy

2-Hydroxy-2-oxo-1,4,2-oxa-aza-phospha(V) cyclohexane-4-methylene phosphonic acid (OAPhMPh) was obtained by a Mannich type reaction. From NMR spectroscopy a chair-conformed heterocyclic structure is suggested. Infrared and Raman data are in agreement with this symmetry and show no evidence of dimeric structure.     

Stick-slip instability analysis

A theoretical investigation of friction-induced self-excited oscillations for systems with one degree of freedom is proposed. The friction force is assumed as an odd function of the relative sliding velocity with a jump discontinuity at a value of zero for the relative sliding velocity. The friction characteristic is approximated with a piecewise linear function, i.e. straight line segments with a suitable slope. For the generic system belonging to the class in question, the stick-slip instability region is located on a suitable dimensionless map.

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Sommario Viene proposta un'indagine teorica sulle oscillazioni autoeccitate indotte dall'attrito per sistemi ad un grado di libertà. La forza d'attrito viene assunta come funzione dispari della velocità relativa tra le superfici accoppiate, con una discontinuità di prima specie in corrispondenza del valore nullo della velocità. La caratteristica d'attrito viene approssimata mediante una funzione lineare a tratti con segmenti di opportuna pendenza. Per il generico sistema appartenente alla classe in esame, si perviene all'individuazione, su opportuna mappa adimensionale, della regione di instabilità da stick-slip.

     

High Sensitive Microsensor Based on Organic‐Inorganic Composite for Two‐Dimensional Mapping of H2O2 by SECM

The present work describes the development of a selective, sensitive and stable sensing microsensor for scanning electrochemical microscopy (SECM) to measure H₂O₂ during electrochemical reduction of oxygen. The microsensor is based on graphene and Poly(3,4‐ethylenedioxythiophene) composite as support to iron (III) hexacyanoferrate (II) (PEDOT/graphene/Fe^III₄[Fe^II(CN)₆]₃ microsensor). The electrochemical properties of the PEDOT/graphene/Fe^III₄[Fe^II(CN)₆]₃ microsensor were investigated by cyclic voltammetry (CV) and scanning electrochemical microscopy (SECM). The PEDOT/graphene/Fe^III₄[Fe^II(CN)₆]₃ microsensor showed an excellent electrocatalytic activity toward hydrogen peroxide (H₂O₂) reduction with a diminution of the overpotential of about 500 mV in comparison to the process at a bare gold microelectrode. The microsensor presented excellent performance for two dimensional mapping of H₂O₂ by SECM in 0.1 mol L^?1 phosphate buffer solution (pH 7.0). Under optimized conditions, a linear response range from 1 up to 1000 µmol L^?1 was obtained with a sensitivity of 0.08 nA L µmol^?1 and limit of detection of 0.5 µmol L^?1.     

Dividing a complex reaction involving a hypervalent iodine reagent into three limiting mechanisms by ab initio molecular dynamics

The electrophilic N‐trifluoromethylation of MeCN with a hypervalent iodine reagent to form a nitrilium ion, that is rapidly trapped by an azole nucleophile, is thought to occur via reductive elimination (RE). A recent study showed that, depending on the solvent representation, the S_N2 is favoured to a different extent over the RE. However, there is a discriminative solvent effect present, which calls for a statistical mechanics approach to fully account for the entropic contributions. In this study, we perform metadynamic simulations for two trifluoromethylation reactions (with N‐ and S‐nucleophiles), showing that the RE mechanism is always favoured in MeCN solution. These computations also indicate that a radical mechanism (single electron transfer) may play an important role. The computational protocol based on accelerated molecular dynamics for the exploration of the free energy surface is transferable and will be applied to similar reactions to investigate other electrophiles on the reagent. Based on the activation parameters determined, this approach also gives insight into the mechanistic details of the trifluoromethylation and shows that these commonly known mechanisms mark the limits within which the reaction proceeds. © 2015 Wiley Periodicals, Inc.     

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

We test the relative performances of two different approaches to the computation of forces for molecular dynamics simulations on graphics processing units. A “vertex‐based” approach, where a computing thread is started per particle, is compared to an “edge‐based” approach, where a thread is started per each potentially non‐zero interaction. We find that the former is more efficient for systems with many simple interactions per particle while the latter is more efficient if the system has more complicated interactions or fewer of them. By comparing computation times on more and less recent graphics processing unit technology, we predict that, if the current trend of increasing the number of processing cores—as opposed to their computing power—remains, the “edge‐based” approach will gradually become the most efficient choice in an increasing number of cases. © 2014 Wiley Periodicals, Inc.     

A Cross-Entropy Approach to the Estimation of Generalized Linear Multilevel Models

In this article, we use the cross-entropy method for noisy optimization for fitting generalized linear multilevel models through maximum likelihood. We propose specifications of the instrumental distributions for positive and bounded parameters that improve the computational performance. We also introduce a new stopping criterion, which has the advantage of being problem-independent. In a second step we find, by means of extensive Monte Carlo experiments, the most suitable values of the input parameters of the algorithm. Finally, we compare the method to the benchmark estimation technique based on numerical integration. The cross-entropy approach turns out to be preferable from both the statistical and the computational point of view. In the last part of the article, the method is used to model the probability of firm exits in the healthcare industry in Italy. Supplemental materials are available online.     

Development and validation of a high-performance liquid chromatography-tandem mass spectrometry method for the determination of the novel inhibitor of angiogenesis E-3810 in human plasma and its application in a clinical pharmacokinetic study

E-3810, 6-[[7-[(1-aminocyclopropyl)methoxy]-6-methoxy-4-quinolyl]oxy]-N-methyl-naphthalene-1-carboxamide, is a novel, potent, dual inhibitor of vascular endothelial growth factor and fibroblast growth factor receptors with antiangiogenic properties, now under early clinical evaluation as an anticancer agent. To investigate its clinical pharmacokinetics, a high-performance liquid chromatography-tandem mass spectrometry method was developed and validated to measure the drug in human plasma on the basis of simple protein precipitation with methanol after addition of deuterated E-3810 as internal standard. The method requires a small volume of sample (100 μl) and is rapid and selective, allowing good resolution of peaks in 5 min. It is sensitive, precise, and accurate, with overall precision, expressed as CV%, always ≤7.1%, accuracy in the range 92.7%-104.4%, and high recovery, close to 100%. The limit of detection is 0.01 ng/ml, and the lower limit of quantitation is 2.0 ng/ml. The assay was validated in the range from the lower limit of quantitation up to 500.0 ng/ml. This is the first method developed and validated for analyzing E-3810 in human plasma. The method has been successfully applied to study E-3810 pharmacokinetics in cancer patients with solid tumors who are receiving daily oral doses of the drug during the phase I trial.