Energetics of radical transfer in DNA photolyase

Charge separation and radical transfer in DNA photolyase from Escherichia coli is investigated by computing electrostatic free energies from a solution of the Poisson-Boltzmann equation. For the initial charge separation 450 meV are available. According to recent experiments [Aubert et al. Nature 2000, 405, 586-590] the flavin receives an electron from the proximal tryptophan W382, which consequently forms a cationic radical WH(*)(+)382. The radical state is subsequently transferred along the triad W382-W359-W306 of conserved tryptophans. The radical transfer to the intermediate tryptophan W359 is nearly isoenergetic (58 meV uphill); the radical transfer from the intermediate W359 to the distal W306 is 200 meV downhill in energy, funneling and stabilizing the radical state at W306. The resulting cationic radical WH(*)(+)306 is further stabilized by deprotonation, yielding the neutral radical W(*)306, which is 214 meV below WH(*)(+)306. The time scale of the charge recombination process yielding back the resting enzyme with FADH(*) is governed by reprotonation of W306, with a calculated lifetime of 1.2 ms that correlates well with the measured lifetime of 17 ms. In photolyase from Anacystis nidulans the radical state is partially transferred to a tyrosine [Aubert et al. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 5423-5427]. In photolyase from Escherichia coli, there is a tyrosine (Y464) close to the distal tryptophan W306 that could play this role. We show that this tyrosine cannot be involved in radical transfer, because the electron transfer from tyrosine to W306 is much too endergonic (750 meV) and a direct hydrogen transfer is likely too slow. Coupling of specific charge states of the tryptophan triad with protonation patterns of titratable residues of photolyase is small.     

Cobalt(II) Chloride Complex Formation in Acetamide–Calcium Nitrate Tetrahydrate Melts

The absorption spectra of Co(II) chloride complexes, containing variable concentrations of chloride ligand, in a molten mixture of 80 mol% acetamide–20 mol% calcium nitrate tetrahydrate, were studied at 313, 333, 353, and 363 K, in the wavelength range 400-800 nm. The melt contains three possible ligands (CH₃CONH₂, H₂O, and NO₃ ^-) for competition with added chloride ligand. Addition of chloride caused a shift of the absorption maximum of octahedral cobalt(II) nitrate towards lower energies and pronounced changes in the shape of the initial spectrum of cobalt(II) nitrate. The effect of temperature changes on the molar absorption coefficient of the Co(II) species was dependent on the chloride concentration and was attributed to the structural changes occurring in the cobalt(II) species. The STAR and STAR FA programs were applied to identify the complex ionic species and to calculate the stability constants of Co(II) complexes formed in this solvent. The results indicate the highest probability of formation of the following complex species: Co(NO₃)₄ ^2-, Co(NO₃)₂Cl₂ ^2-, and CoCl₄ ^2-. Stability constants of each complex were presented for the equilibria occurring at 313, 333, 353, and 363 K. Distribution of the Co(II) species was also calculated over the ranges of chloride concentration and temperature investigated.     

Ferromagnetism in Metallocene-Doped Fullerenes

 Ferromagnetism in fullerene-based systems doped with metallocenes is reviewed. These compounds form a ferromagnetic state by spin-coupling between π electrons on fullerene units, while the metallocene molecules do not contribute to the spin ordering. One of these compounds has the highest critical temperature (19 K) for this class of compound. The magnetic properties of these materials are very strongly dependent on the crystallization conditions. Corresponding author. E-mail: Dragan.Mihailovic@ijs.si Received September 4, 2002; accepted September 6, 2002     

Cationic polyelectrolytes. III. Nitrile-group reaction of macromolecular compounds with N,N-dialkylaminoalkylamines

The chemical reaction in aqueous medium of polyacrylonitrile and acrylonitrile–vinyl acetate co-polymer using asymmetrical diamines of H₂N? (CH₂)_m? NR₂ (m = 2,3) structure was studied. It was found that the nitrile group is modified to an dialkylaminoalkylacrylamide group; also determined were the reaction conditions required to obtain the highest degree of chemical transformation of the nitrile groups. All modified compounds were characterized by analytical spectroscopy (IR and ¹H NMR) and by rheological methods. It was also established that glutaronitrile can be used as a low-molecular-weight model to study the chemical transformation of nitrile groups in polyacrylonitrile and related polymers.     

Cationic polyelectrolytes. II. Amination of chloromethylated polystyrene with hydroxyalkylic secondary amines

The reaction of chloromethylated polystyrene with methyl(2- hydroxyethyl)amine and butyle (2-hydroxyethyl)amine was studied kinetically. The reaction of benzyl chloride with these amines was also investigated for comparison. N,N-dimethylformamide and dioxane were used as solvents. The reactions of benzyl chloride with the two amines in these solvents took place according to normal kinetics of the second order. Reaction kinetics depend on the nature of the amine and solvent in Chloromethylated polystyrene reactions. In dioxane the self-accelerating effect of the reaction for β ? 0.5 is apparent. Steric hindrance of the reaction, beginning with a conversion degree of about 75%, wss observed for butyl(2-hydroxyethyl)amine in N,N-dimethylformamide. This self-accelerating effect is observed in dioxane at the same reaction degree. The activation energies and frequency factors were calculated for the amination of benzyl chloride and chloromethylated polystyrene with the two amines in N,N-dimethylformamide and dioxane.     

Analysis of the effects of catalytic bleaching on cotton

Hydrogen peroxide can be catalyzed to bleach cotton fibers at temperatures as low as 30°C by incorporating dinuclear tri-μ-oxo bridged manganese(IV) complex of the ligand 1,4,7-trimethyl-1,4,7-triazacyclononane (MnTACN) as the catalyst in the bleaching solution. The catalytic system was found to be more selective under the conditions applied than the non-catalytic H₂O₂ system, showing better bleaching performance while causing slightly lower decrease in degree of polymerization (DP) of cellulose. In order to gain fundamental knowledge of the bleach effect on cotton fibers and cellulose as its main component, especially after catalytic bleaching, X-ray Photoelectron Spectroscopy (XPS) was used to study surface chemical effects. The Washburn method was applied to investigate wetting properties, and liquid porosity was used to obtain pore volume distribution (PVD) plots. Parallel analyzes performed on model cotton fabric, i.e. “clean” cotton fabric stained with morin - a pigment regularly found in native cotton fiber, helped to differentiate between pigment oxidation and other bleaching effects produced on the (regular) industrially scoured cotton fabric. Bleaching was not limited to the chemical action but also affected cotton fiber capillary parameters most likely due to the removal of non-cellulosic materials as well as chain-shortened cellulose.     

Spectroscopic investigation of β-cyclodextrin -metoprolol tartrate inclusion complexes

Aqueous-solution complexes of β-cyclodextrin (β-CD) with metoprolol tartrate (MET) have been analysed with ¹H NMR and UV–vis spectroscopy. With ¹H NMR a [1:1] stoichiometry could be established for the β-CD-MET complex while its stability constant was determined with UV–vis spectroscopy. Powder diffraction data of a polycrystalline sample of the β-CD-MET complex show that a novel product has been formed, likely to be a β-CD-MET [1:1] inclusion complex. Also Hyperchem MM+ molecular-dynamics results suggest an inclusion complex and from ¹H NMR data it is inferred that probably the MET is docked in the CD with the formers methoxyethyl-benzene moiety in front. Mihaela Toma is Socrates/Erasmus student at UNED Madrid     

Two-stage latexes of polystyrene acrylates

ABSTRACT

The modification of decomposition rate of the potassium persulfate initiator during the synthesis of “two-stage latexes” polystyrene-ethyl acrylate (EtA) of butyl acrylale (BuA) and of 2-ethylhexyl acrylate (EHA) is studied. This rate is minimum for BuA and maximum for EHA, in good agreement with the value of solubility parameters. The appearance of poryacrvlaf.es determines the existence of water bonded to the polar polymer. The amount of water bonded increases in the sequence PEtA?PBuA?PEHA, function of the modification of the diameters of the particles resulted from the latexes obtained.     

Composites of poly(ε‐caprolactone) and Mo6S3I6 Nanowires

Composites of poly(ε‐caprolactone) (PCL) and molybdenum sulfur iodine (MoSI) nanowires were prepared using twin‐screw extrusion. Extensive microscopic examination of the composites revealed the nanowires were well dispersed in the PCL matrix, although bundles of Mo₆S₃I₆ ropes were evident at higher loadings. Secondary electron imaging (SEI) showed the nanowires had formed an extensive network throughout the PCL matrix, resulting in increased electrical conductivity of PCL, by eight orders of magnitude, and an electrical percolation threshold of 6.5 × 10^?3 vol%. Thermal analysis (DSC), WAXD, and hot stage polarized optical microscopy (HSPOM) experiments revealed Mo₆S₃I₆ addition altered PCL crystallization kinetics, nucleation density, and crystalline content. A greater number of smaller spherulites were formed via heterogeneous nucleation. The onset of thermal decomposition (TGA) of PCL decreased by 70°C, a consequence of the thermal degradation of Mo₆S₃I₆ to MoO₃, which in turn accelerates the formation of volatile gases during the first stage of PCL decomposition. Copyright © 2010 John Wiley & Sons, Ltd.