ALS-associated mutant SOD1<Superscript>G93A</Superscript> causes mitochondrial vacuolation by expansion of the intermembrane space and by involvement of SOD1 aggregation and peroxisomes

Background  

Amyotrophic lateral sclerosis (ALS) is an age-dependent neurodegenerative disease that causes motor neuron degeneration, paralysis and death. Mutations in Cu, Zn superoxide dismutase (SOD1) are one cause for the familial form of this disease. Transgenic mice expressing mutant SOD1 develop age-dependent motor neuron degeneration, skeletal muscle weakness, paralysis and death similar to humans. The mechanism whereby mutant SOD1 induces motor neuron degeneration is not understood but widespread mitochondrial vacuolation has been observed during early phases of motor neuron degeneration. How this vacuolation develops is not clear, but could involve autophagic vacuolation, mitochondrial permeability transition (MPT) or uncharacterized mechanisms. To determine which of these possibilities are true, we examined the vacuolar patterns in detail in transgenic mice expressing mutant SOD1^G93A.     

Dichlorocarbene Addition to

In contrast to the terminal phosphinidene complex PhPW(CO)(5) (2), which adds to [5]metacyclophane (1) in a 1,4-fashion, dichlorocarbene preferentially adds in a 1,2-fashion to the formal "anti-Bredt" type double bond of the aromatic ring of 1 to afford the norcaradiene 11b, which immediately rearranges to the bridged cycloheptatriene 12b and further by a [1,5] sigmatropic chlorine migration to the isomeric 13b as the first observable product. More slowly, the latter isomerizes via a dissociative mechanism to give 15b. A computational study supports the notion that the [1,5] chlorine migration in the rearrangement 12b --> 13b, for which an activation barrier of 70.2 kJ mol(-)(1) was calculated, is essentially concerted with minor charge separation. In contrast, the analogous [1,5] chlorine migration in the flat model compound 7,7-dichlorocycloheptatriene (12a) displays features of a dissociative pathway.     

Verification of a model to predict the influence of particle inertia and gravity on a decaying turbulent particle-laden flow

In an earlier publication some of the authors presented a theoretical model for the calculation of the influence of particle inertia and gravity on the turbulence in a stationary particle-laden flow. In the present publication the model is extended for application to a decaying suspension. Also a comparison is given between predictions made with the model and experimental data (own data and data reported in the literature) on a decaying turbulent flow with particles in a water tunnel or in a wind tunnel. For most of the experiments a prediction with reasonable accuracy and an interpretation is possible by means of the model.     

The role of the active site tyrosine in the mechanism of lytic polysaccharide monooxygenase

Catalytic breakdown of polysaccharides can be achieved more efficiently by means of the enzymes lytic polysaccharide monooxygenases (LPMOs). However, the LPMO mechanism has remained controversial, preventing full exploitation of their potential. One of the controversies has centered around an active site tyrosine, present in most LPMO classes. Recent investigations have for the first time obtained direct (spectroscopic) evidence for the possibility of chemical modification of this tyrosine. However, the spectroscopic features obtained in the different investigations are remarkably different, with absorption maximum at 420 and 490 nm, respectively. In this paper we use density functional theory (DFT) in a QM/MM formulation to reconcile these (apparently) conflicting results. By modeling the spectroscopy as well as the underlying reaction mechanism we can show how formation of two isomers (both involving deprotonation of tyrosine) explains the difference in the observed spectroscopic features. Both isomers have a [TyrO–Cu–OH]⁺ moiety with the OH in either the cis- or trans-position to a deprotonated tyrosine. Although the cis-[TyrO–Cu–OH]⁺ moiety is well positioned for oxidation of the substrate, preliminary calculations with the substrate reveal that the reactivity is at best moderate, making a protective role of tyrosine more likely.

With QM/MM, we investigate the mechanism of tyrosine deprotonation in lytic polysaccharide monooxygenases. Our results support deprotonation and our calculated UV-vis spectra show that two isomers must be formed to match recent experiments.     

Raman study of the hexafluoroaluminate ion in solid and molten FLINAK

Raman spectra have been obtained for matrix-isolated AlF6(3-) in an LiF/NaF/KF (FLINAK) eutectic mixture. Three Raman bands characteristic of the hexafluoroaluminate ion were identified in the solids formed from FLINAK melts which contained small amounts (5-11 mol%) of either AlF3 or Na3AlF6. The three allowed Raman-active bands of the matrix-isolated octahedral complex ion, nu 1(A1g), nu 2(Eg), and nu 5(F2g), were observed at 560.5, 380, and 325 cm-1, respectively, for the solid sample at 25 degrees C. Wavenumbers and relative intensities were similar to those of Na3AlF6 (cryolite), K3AlF6, and K2NaAlF6 (elpasolite) and other crystals known to contain discrete, octahedral AlF6(3-) ions. Peak positions, half-widths, and relative intensities for the bands were measured for samples at temperatures different from room temperature through the melting transition and into the molten state. The transition from high-temperature solid to molten salt at about 455 degrees C occurred gradually without perceptible change in the peak positions, half-widths, or relative intensities. For a sample in molten FLINAK at 455 degrees C, the nu 1(A1g), nu 2(Eg), and nu 5(F2g) modes of the AlF6(3-) ion were observed at 542, 365, and 324 cm-1, respectively. Raman depolarization experiments were consistent with these assignments, and the low value of the depolarization ratio of the nu 1(A1g) mode at 542 cm-1 indicated that the sample was molten above 455 degrees C. Differential thermal analysis also indicated that the FLINAK samples melted at about 455 degrees C. Raman measurements were performed for samples at temperatures from 25 to 600 degrees C in a silver dish, on a hot stage, in an argon-filled atmosphere, under a microscope. Additional Raman experiments were performed on samples at temperatures from 25 to 750 degrees C in a conventional graphite windowless cell, in an argon-filled quartz tube, in a standard furnace. Over the concentration range 4.8-11 mol% AlF3 (CR 23-8.0) in FLINAK, only bands due to the AlF6(3-) ion were detected. There was no evidence to support the presence of other aluminum complexes in these melts.