Wasserstein geometry of porous medium equation

We study the porous medium equation with emphasis on q-Gaussian measures, which are generalizations of Gaussian measures by using power-law distribution. On the space of q-Gaussian measures, the porous medium equation is reduced to an ordinary differential equation for covariance matrix. We introduce a set of inequalities among functionals which gauge the difference between pairs of probability measures and are useful in the analysis of the porous medium equation. We show that any q-Gaussian measure provides a nontrivial pair attaining equality in these inequalities.     

Electrospun Cu-Deposited Flexible Fibers as an Efficient Oxygen Evolution Reaction Electrocatalyst

Developing oxygen evolution reaction (OER) catalysts with high activity, long-term durability, and at low cost remains a great challenge. Herein, we report the high activity of fibrous Cu-based catalysts. The synthesis process is simple and scalable. Electrospinning method was selected to synthesize fibrous polymer substrates (Poly(vinylidene fluoride-co-hexafluoropropylene, PVdF-HFP), which are then covered by Cu via electroless deposition. Cu-deposited PVdF-HFP with different microstructures having smooth and roughened surfaces were also synthesized by drop-casting and impregnation method, respectively, to emphasize the importance of the microstructures on OER activity. The OER activity and durability were studied by linear sweep voltammetry, chronoamperometry, and Tafel slope analysis. The Cu/PVdF-HFP fibrous catalysts exhibit significantly improved OER activity and durability compared with Cu plate as well as Cu-deposited PVdF-HFP with different microstructures. The unique fibrous structure provides better mass transport, diffusion, and large active surface area. In addition to the advantages of the fibrous structure, attenuated total reflection infrared (ATR-IR) and ex situ X-ray photoelectron spectroscopy revealed that the improved specific activity for Cu/PVdF-HFP fiber can be attributed to the synergistic effect between Cu and Cu/PVdF-HFP (electron transfer from Cu to PVdF-HFP) at the Cu|PVdF-HFP interface, which results in optimized reaction energetics for the OER.     

Infrared predissociation spectroscopy of ammonia cluster cations (NH3)n+ (n=2-4) produced by vacuum-ultraviolet photoionization

Infrared predissociation spectroscopy of vacuum ultraviolet-pumped ion (IRPDS-VUV-PI) is performed on ammonia cluster cations (NH3)n+ (n=2-4) that are produced by VUV photoionization in supersonic jets. The structures of (NH3)2+ and (NH3)4+ are determined through the observation of infrared spectra and vibrational calculations based on ab initio calculations at the MP2/6-31G** and 6-31++G** levels. (NH3)2+ is found to be of the "hydrogen-transferred" form having the (H3N+-...NH2) composition. In contrast, (NH3)4+ exhibits the "head-to-head" dimer cation (H3...NH3+ core structure, where the positive charge is shared between two ammonia molecules in the core, and two other molecules are hydrogen bonded onto the core. An unequivocal assignment of the infrared spectrum of (NH3)3+ has not been achieved, because the presence of two isomeric structures could be suggested by the observed spectrum and theoretical calculations.     

Development of aromatic ethers as solvents for a calix[6]arene derivative and extraction of amino acids and proteins

Journal of Inclusion Phenomena and Macrocyclic Chemistry - Calixarene derivatives are excellent host compounds for ionic species in liquid–liquid extraction. However, many studies using...     

Compatibility between methanol and water in the three-dimensional cage formation of large-sized protonated methanol-water mixed clusters

Infrared spectra of large-sized protonated methanol-water mixed clusters, H(+)(MeOH)(m)(H(2)O)(n) (m=1-4, n=4-22), were measured in the OH stretch region. The free OH stretch bands of the water moiety converged to a single peak due to the three-coordinated sites at the sizes of m+n=21, which is the magic number of the protonated water cluster. This is a spectroscopic signature for the formation of the three-dimensional cage structure in the mixed cluster, and it demonstrates the compatibility of a small number of methanol molecules with water in the hydrogen-bonded cage formation. Density functional theory calculations were carried out to examine the relative stability and structures of selected isomers of the mixed clusters. The calculation results supported the microscopic compatibility of methanol and water in the hydrogen-bonded cage development. The authors also found that in the magic number clusters, the surface protonated sites are energetically favored over their internal counterparts and the excess proton prefers to take the form of H(3)O(+) despite the fact that the proton affinity of methanol is greater than that of water.     

Retro‐ene reactions in heterocyclic synthesis. v. a novel synthetic method for 1,3,5‐triazine‐2,4(1H,3H)‐diones

N‐t‐Butylamidines 1 on heating with diphenyl carbonate ( 2 ) at 150‐180° gave the 1,3,5‐triazine‐2,4(1H,3H)‐dione derivatives 5 . Acylation of amidines 1 and cyclocondensation of the resulting carbamates 3 gave [1,3,5,7]tetrazocine‐2,6‐dione derivatives 4 , and subsequent retro‐ene reaction and ring contraction afforded triazine derivatives 5 .     

Syntheses and Functional Studies of Self‐Adjuvanting Anti‐HER2 Cancer Vaccines

The 9‐mer peptide MFCH401 (N: 165–173: DTILWKDIF), which is located in the extracellular domain of HER2, has been predicted to be a novel epitope. Self‐adjuvanting anti‐HER2 vaccine constructs were designed and synthesized via covalently attaching MFCH401 or its linear tandem repeats (2×MFCH401, 3×MFCH401) to a lipopeptide Pam₃CSK₄ via iterative condensation reaction. The in vivo results showed the Pam₃CSK₄‐MFCH401 vaccine construct can induce higher antibody titers of IgG and IgM than those of other conjugates, and the analysis of changes in plasma cytokines level indicate the activation of Th1 cells and NK cells. In addition, the Pam₃CSK₄‐MFCH401 vaccine conjugate induced a specific immune response to HER2‐overexpressing human BT474 cells. Our data clearly indicated that MFCH401 is a promising epitope; moreover, its linear tandem repeats were unsuitable for anticancer vaccine design when conjugating with Pam₃CSK₄, which provided useful evidence for developing further anti‐HER2 cancer vaccines.     

Recent Advances in the Chemical Biology of N-Glycans

Asparagine-linked N-glycans on proteins have diverse structures, and their functions vary according to their structures. In recent years, it has become possible to obtain high quantities of N-glycans via isolation and chemical/enzymatic/chemoenzymatic synthesis. This has allowed for progress in the elucidation of N-glycan functions at the molecular level. Interaction analyses with lectins by glycan arrays or nuclear magnetic resonance (NMR) using various N-glycans have revealed the molecular basis for the recognition of complex structures of N-glycans. Preparation of proteins modified with homogeneous N-glycans revealed the influence of N-glycan modifications on protein functions. Furthermore, N-glycans have potential applications in drug development. This review discusses recent advances in the chemical biology of N-glycans.     

Ion transport in mesoporous silica SBA-16 thin films with 3D cubic structures

Mesoporous silica SBA-16 thin films with highly ordered 3D cubic structures were synthesized on a Si substrate via the dip-coating method. After these films were filled with KCl aqueous solutions, the ionic current passing through the mesopores was measured by applying dc electric fields. At low ion concentrations, the measured I-V curves were nonlinear and the current increased exponentially with respect to voltage. As the ion concentration increased, the I-V curve approached linear behavior. The nonlinear behavior of I-V curves can be reasonably attributed to the electric potential barrier created in nanopores.     

Tuning of the internal energy and isomer distribution in small protonated water clusters H(+)(H2O)(4-8): an application of the inert gas messenger technique

Infrared spectroscopy of gas-phase hydrated clusters provides us much information on structures and dynamics of water networks. However, interpretation of spectra is often difficult because of high internal energy (vibrational temperature) of clusters and coexistence of many isomers. Here we report an approach to vary these factors by using the inert gas (so-called "messenger")-mediated cooling technique. Protonated water clusters with a messenger (M), H(+)(H(2)O)(4-8)·M (M = Ne, Ar, (H(2))(2)), are formed in a molecular beam and probed with infrared photodissociation spectroscopy in the OH stretch region. Observed spectra are compared with each other and with bare H(+)(H(2)O)(n). They show clear messenger dependence in their bandwidths and relative band intensities, reflecting different internal energy and isomer distribution, respectively. It is shown that the internal energy follows the order H(+)(H(2)O)(n) > H(+)(H(2)O)(n)·(H(2))(2) > H(+)(H(2)O)(n)·Ar > H(+)(H(2)O)(n)·Ne, while the isomer-selectivity, which changes the isomer distribution in the bare system, follows the order H(+)(H(2)O)(n)·Ar > H(+)(H(2)O)(n)·(H(2))(2) > H(+)(H(2)O)(n)·Ne ~ (H(+)(H(2)O)(n)). Although the origin of the isomer-selectivity is unclear, comparison among spectra measured with different messengers is very powerful in spectral analyses and makes it possible to easily assign spectral features of each isomer.