A loop-by-loop defect rectification procedure for optimal synthesis of Stephenson III path generators

This paper presents a formulation of constraints for the synthesis of Stephenson III mechanism and a loop-by-loop defect-rectification procedure. The procedure divides the Stephenson III mechanism into two loops, namely, Loop I, i.e., four-bar, and Loop II, i.e., five-bar mechanisms. Then, the defects are identified using the established methodology to formulate the defect-specific constraints in the simplified form. Based on the constraints, an optimization problem is formulated to synthesize a Stephenson III mechanism for path generation. A well-established meta-heuristic algorithm is used to solve the constrained optimization problem. For demonstrating the effectiveness of the formulated constraints, two numerical examples are considered, in which Stephenson III path generator mechanisms are synthesized. It is found that the mechanisms synthesized using the proposed procedure are defect-free when constraints are imposed, which is verified using the stick-diagram.

     

Photoredox-Catalyzed Labeling of Hydroxyindoles with Chemoselectivity (PhotoCLIC) for Site-Specific Protein Bioconjugation

We have developed a novel visible-light-catalyzed bioconjugation reaction, PhotoCLIC, that enables chemoselective attachment of diverse aromatic amine reagents onto a site-specifically installed 5-hydroxytryptophan residue (5HTP) on full-length proteins of varied complexity. The reaction uses catalytic amounts of methylene blue and blue/red light-emitting diodes (455/650 nm) for rapid site-specific protein bioconjugation. Characterization of the PhotoCLIC product reveals a unique structure formed likely through a singlet oxygen-dependent modification of 5HTP. PhotoCLIC has a wide substrate scope and its compatibility with strain-promoted azide-alkyne click reaction, enables site-specific dual-labeling of a target protein.     

Effect of Fluorine Substitution on Absorption and Emission Properties of Figure-eight-shaped [5]Helicene Dimer: A Computational Study at RI-MP2/RI-ADC(2) Level

Chirality is a very important characteristic of optically active molecules and polyaromatics with helical structures, and plays a vital role in various applications in material science. In the present work, we show the effects of fluorine substitution at various positions in a figure-8-shaped [5]helicene dimer on the ground and excited state g-factors. Calculations for the ground and excited states are performed at the MP2 and ADC(2) levels of theory, respectively. The results reveal that fluorination has a large effect on the excited state structures. The values of the excited state dissymmetry factors for the molecules with fluorinations at both ends of the figure-8 systems are smaller than that of the parent system. On the other hand, fluorinations only in the stacked-phenyl region results in an increase in the value of . The perfluorinated system shows the smallest .     

Toxicological Effects of Metal Nanoparticles Employed in Biomedicine: Biocompatibility,Clinical Trials,and Future Perspective

Metal nanoparticles play a crucial role in the medical industry due to its desirable properties such as antimicrobial activity, anti-cancer property, and its application in disease diagnostics. These properties enable the nanoparticles to be used as efficient medical devices for various treatments as well as drug delivery systems. Despite all the positives, metal nanoparticles are known for causing toxicity in the living system. The toxicological effects of metal nanoparticles are due to their size, surface*e coating, and the dose administered. Therefore, it is important to study the toxic effects of these nanoparticles before they are used as medical devices for various treatments. This review focuses on the five major metal nanoparticles used in the medical field, namely; silver, gold, iron oxide, zinc oxide, and titanium dioxide nanoparticles. The non-exhaustive review consists of an introduction to the toxicological effects of these nanoparticles, the biocompatibility, and the current and future clinical perspective on metal nanoparticles.     

Nanoencapsulation and characterization of Albizia chinensis isolated antioxidant quercitrin on PLA nanoparticles

The plant isolated antioxidant quercitrin has been encapsulated on poly-d,l-lactide (PLA) nanoparticles by solvent evaporation method to improve the solubility, permeability and stability of this molecule. The size of quercitrin-PLA nanoparticles is 250 ± 68 nm whereas that PLA nanoparticles is 195 ± 55 nm. The encapsulation efficiency of nanoencapsulated quercitrin evaluated by HPLC and antioxidant assay is 40%. The in vitro release kinetics of quercitrin under physiological condition reveals initial burst release followed by sustained release. Less fluorescence quenching is observed with equimolar concentration of PLA encapsulated quercitrin than free quercitrin. The presence of quercitrin specific peaks on FTIR of five times washed quercitrin loaded PLA nanoparticles provides an extra evidence for the encapsulation of quercitrin into PLA nanoparticles. These properties of quercitrin nanomedicine provide a new potential for the use of such less useful highly active antioxidant molecule towards the development of better therapeutic for intestinal anti-inflammatory effect and nutraceutical compounds.     

Alternative Fast and Slow Primary Charge-Separation Pathways in Photosystem II

Photosystem-II (PSII) is a multi-subunit protein complex that harvests sunlight to perform oxygenic photosynthesis. Initial light-activated charge separation takes place at a reaction centre consisting of four chlorophylls and two pheophytins. Understanding the processes following light excitation remains elusive due to spectral congestion, the ultrafast nature, and multi-component behaviour of the charge-separation process. Here, using advanced computational multiscale approaches which take into account the large-scale configurational flexibility of the system, we identify two possible primary pathways to radical-pair formation that differ by three orders of magnitude in their kinetics. The fast (short-range) pathway is dominant, but the existence of an alternative slow (long-range) charge-separation pathway hints at the evolution of redundancy that may serve other purposes, adaptive or protective, related to formation of the unique oxidative species that drives water oxidation in PSII.     

Purification,growth and ESR studies of sodium nitrate

Single crystals of sodium nitrate have been purified and grown using zone-refining system fabricated in our laboratory. Laue photographs were employed to check the crystallinity. X-ray irradiated crystals have been studied by electron spin resonance.     

An Efficient Opal-Suppressor Tryptophanyl Pair Creates New Routes for Simultaneously Incorporating up to Three Distinct Noncanonical Amino Acids into Proteins in Mammalian Cells**

Site-specific incorporation of multiple distinct noncanonical amino acids (ncAAs) into proteins in mammalian cells is a promising technology, where each ncAA must be assigned to a different orthogonal aminoacyl-tRNA synthetase (aaRS)/tRNA pair that reads a distinct nonsense codon. Available pairs suppress TGA or TAA codons at a considerably lower efficiency than TAG, limiting the scope of this technology. Here we show that the E. coli tryptophanyl (EcTrp) pair is an excellent TGA-suppressor in mammalian cells, which can be combined with the three other established pairs to develop three new routes for dual-ncAA incorporation. Using these platforms, we site-specifically incorporated two different bioconjugation handles into an antibody with excellent efficiency, and subsequently labeled it with two distinct cytotoxic payloads. Additionally, we combined the EcTrp pair with other pairs to site-specifically incorporate three distinct ncAAs into a reporter protein in mammalian cells.