Analytical supramolecular chemistry: Colorimetric and fluorimetric chemosensors

Chemical sensing using indicators, or chemosensor, has rapidly developed over the past decades. Its chemistry covers a wide range of scientific fields, in which analytical and supramolecular chemistry are key ideas to create functional and smart chemosensors. The principle of such a chemosensor design consists of three major processes: (1) to separate analytes, (2) to capture a specific analyte from a complex mixture, and (3) to output a signal from a [chemosensor•analyte] complex. In this review, “Analytical Supramolecular Chemistry” as a new scientific area was proposed, enabling us to promote deep insights into the mechanistic understanding of chemosensors. This review describes the interesting and representative chemosensors involving significant photochemical and photophysical processes and recent our advances in analytical supramolecular chemistry.     

Through bond energy transfer (TBET)-based fluorescent chemosensors

Excitation energy transfer is one of the crucial issues in photophysical and photochemical process of any muti-chromophoric molecular systems, such as energy harvester and fluorescent chemosensor. Through bond energy transfer (TBET)-based fluorescent chemosensors are composed of three main parts: energy donor, energy acceptor, and rigid linker. Comparing with the often used Förster resonance energy transfer (FRET) mechanism, TBET does not require spectral overlap, thus it may enable more possible combination of energy donors and acceptors to be employed and afford higher sensitivity toward targets through ratiometric fluorescence. In this review, we highlight the recent progress in the design and biological applications of the organic TBET-based fluorescent chemosensors during 2014–2019, which will provide profound guidance for designing powerful chemosensors as well as exploring further biological applications.     

Recent progress of calixarene-based fluorescent chemosensors towards mercury ions

In recent years, calixarene-based fluorescent chemosensors for mercury(II) are mushroom growth because of its intrinsic sensitivity. The design of the highly selective calixarene-based chemosensors towards mercury(II) is still a challenging task. In this paper, the progress of highly selective fluorescent sensor for mercury(II) based on calixarene derivatives is reviewed according to a mono-fluorophore chemosensor and a bi-fluorophore chemosensor. Some new developments such as calixarene-modified nanoparticles are also covered.     

Synthesis and evaluation of a pseudocyclic tristhiourea-based anion host

A novel methodology for the evaluation of receptor arrangement in structurally flexible anion chemosensors was developed and applied to map the binding site of a new pseudocyclic tristhiourea chemosensor (6). The syntheses of 6 and related macrocyclic chemosensor 10 (a model of the folded monomeric structure of 6) are reported. Both chemosensors were evaluated by titration with a variety of structurally different anions in CH3Cl and DMSO, showing a common preference for F-, CH3CO2-, and H2PO4-. However, within this group of anions, the binding patterns of the chemosensors differed, indicating dissimilarity in the arrangement of the binding sites of 6 and 10.     

A Chemical Recognition Element for Lithium Ions Based on Optical Electronic Absorption

Xerogel samples with entrapped series of four optical absorption chemosensors were prepared by sol-gel process. These materials are proposed as chemical recognition elements of an optical chemical sensor. The roles of the chemosensors play proton-dissociable chromogenic azocrown ethers bearing phenol and two azo groups as parts of macrocycles. Occurrence of the alkali ion—receptor interaction is signalled by the chemosensors changing their electronic absorption spectra. By this way chemosensor 4O-CH₃ is able to distinguish Li⁺ ions from other alkali metal ions present in aqueous solution, if the chemosensor is entrapped in Glymo-silica (1:1) xerogel matrix. The proposed recognition element for Li⁺ has been exposed to the cycles chemisorption—desorption many times. Besides DRIFT spectra of the used xerogel matrices were analyzed.     

Sensitive and Selective Fluorescent Chemosensors Combining Multiple PET Processes for Ag+ Sensing

In this work, a novel fluorescent chemosensor combining multiple photoinduced electron transfer(PET) processes for the detection of Ag⁺ ion was synthesized. The PET processes were derived from the lone electron pair of the selenium donors and the tertiary nitrogen atom of the coumarin fluorophore, which have not yet been used in the fluorescent chemosensor designed for Ag⁺ ion. Interestingly, the chemosensors showed fluorescent responses to Ag⁺ ion with a fluorescence enhancement factor of 3-5-fold by blocking the intramolecular PET quenching pathways. Furthermore, the probe exhibited high selectivity and sensitivity for Ag⁺ ion over other relevant species with detection limit down to 10 nmol/L level. The chemosensors also showed excellent performances in analyzing natural water samples. The chemosensors developed herein represent a new strategy for the PET fluorescent chemosensor design for the detection of Ag⁺ ion.     

识别过渡金属离子的1,8-萘二甲酰亚胺多胺衍生物荧光传感器的研究

A series of fluorescent chemosensors 1-3 were synthesized to detect transition metal ions. At the room temperature, fluorescence intensities of these chemosensors in acetonitrile without transition metal ions were found to be very weak, due to the process of the e±cient intramolecular photoinduced electron transfer (PET). However, after addition of the transition metal ions, the chemosensor 1-3 exhibits obvious fluorescence enhancement. Moreover, the intensity of the fluorescence emission of chemosensors increases significantly in the presence of Zn2+ and Cd2+. The fluorescent chemosensors with different polyamine as receptors show diverse a±nity abilities to the transition metal ions and signal the receptor-metal ion interaction by the intensity change of fluorescence emission.     

Origins of ‘on-off’ fluorescent behavior of 8-hydroxyquinoline containing chemosensors

Derivatives of 8-hydroxyquinoline were used as model compounds to probe the pathways of non-radiative relaxation of fluorophores in two fluorescent chemosensors. Results suggest that both photo-induced proton transfer and photo-induced electron transfer contribute to quenching the fluorescence of the chemosensors. Crystal structures of an 8-hydroxyquinoline-containing chemosensor complexed to various metal ions indicate that a proton shift occurs concomitant with complex formation. This proton shift precludes both photo-induced proton and electron transfer allowing fluorescence emission from chemosensor-metal ion complexes.     

A highly selective and sensitive fluorescence sensing system for distinction between diphosphate and nucleoside triphosphates

Among the numerous chemosensors available for diphosphate (P(2)O(7)(4-), PPi) and nucleoside triphosphates (NTPs), only a few can distinguish between PPi and NTPs. Hence, very few bioanalytical applications based on such selective chemosensors have been realized. We have developed a new fluorescence sensing system for distinction between PPi and NTPs based on the combination of two sensors, a binuclear Zn(II) complex (1·2Zn) and boronic acid (BA), in which one chemosensor (1·2Zn) shows signal changes depending on the PPi (or NTP) concentration, and the other (BA) blocks the signal change caused by NTPs; this system enables the distinction of PPi from NTPs and is sensitive to nanomolar concentrations of PPi. The new sensing system has been successfully used for the direct quantification of RNA polymerase activity.     

Application of quantum dots as analytical tools in automated chemical analysis: A review

Colloidal semiconductor nanocrystals or quantum dots (QDs) are one of the most relevant developments in the fast-growing world of nanotechnology. Initially proposed as luminescent biological labels, they are finding new important fields of application in analytical chemistry, where their photoluminescent properties have been exploited in environmental monitoring, pharmaceutical and clinical analysis and food quality control. Despite the enormous variety of applications that have been developed, the automation of QDs-based analytical methodologies by resorting to automation tools such as continuous flow analysis and related techniques, which would allow to take advantage of particular features of the nanocrystals such as the versatile surface chemistry and ligand binding ability, the aptitude to generate reactive species, the possibility of encapsulation in different materials while retaining native luminescence providing the means for the implementation of renewable chemosensors or even the utilisation of more drastic and even stability impairing reaction conditions, is hitherto very limited. In this review, we provide insights into the analytical potential of quantum dots focusing on prospects of their utilisation in automated flow-based and flow-related approaches and the future outlook of QDs applications in chemical analysis.     

Skeleton-selective fluorescent chemosensor based on cyclodextrin bearing a 4-amino-7-nitrobenz-2-oxa-1,3-diazole moiety

A new type of fluorescent chemosensor, based on modified cyclodextrins bearing the fluorophore unit NBD-amine, was prepared. One of these new chemosensors, NC0betaCD, is sensitive to adamantane and borneol derivatives, which have a comparatively spherical shape that fits the beta-CD cavity, but is not sensitive to bile acids, which are strongly bound by the native beta-CD. Even in the presence of a bile acid, NC0betaCD can detect 1-adamantanol. Another of this new type of chemosensors, NC0gammaCD, is sensitive to bile acids but not to adamantane derivatives. The response of the new type of chemosensors to a guest was an increase in the fluorescence intensity.     

Thiacalix[4]arene based reconfigurable molecular switches: set-reset memorized sequential device

The fluorescent chemosensors 3, 5 and 7 based on thiacalix[4]arene bearing naphthyl groups have been designed and synthesized. The optical chemosensor 3 based on a thiacalix[4]arene of cone conformation behaves as "turn-on" optical chemosensor for Fe(3+) and F(-) ions. However, chemosensors 5 and 7 based on a thiacalix[4]arene of 1,3-alternate conformation demonstrate "turn-on" optical behaviour for Hg(2+), F(-) ions (with receptor 5 as turn-on for K(+) ions also) and "turn-off" behaviour for Fe(3+) ions. The simultaneous presence of Fe(3+) and Hg(2+) or K(+) or F(-) ions results in formulation of reversible "on-off" switches. Various molecular logic gates developed in response to molecular switching between these chemical inputs have been integrated into sequential logic circuits with memory function in a feedback loop which mimics "set-reset" molecular level information processing device.     

Turn-on fluorescence sensing of nucleoside polyphosphates using a xanthene-based Zn(II) complex chemosensor

Fluorescence sensing with small molecular chemosensors is a versatile technique for elucidation of function of various biological substances. We now report a new fluorescent chemosensor for nucleoside polyphosphates such as ATP using metal-anion coordination chemistry. The chemosensor 1-2Zn(II) is comprised of the two sites of 2,2'-dipicolylamine (Dpa)-Zn(II) as the binding motifs and xanthene as a fluorescent sensing unit for nucleoside polyphosphates. The chemosensor 1-2Zn(II) selectively senses nucleoside polyphosphates with a large fluorescence enhancement (F/F(o) > 15) and strong binding affinity (K(app) approximately = 1 x 10(6) M(-1)), whereas no detectable fluorescence change was induced by monophosphate species and various other anions. The 'turn-on,' fluorescence of 1-2Zn(II) is based on a new mechanism, which involves the binding-induced recovery of the conjugated form of the xanthene ring from its nonfluorescent deconjugated state which was formed by an unprecedented nucleophilic attack of zinc-bound water. The selective and highly sensitive ability of 1-2Zn(II) to detect nucleoside polyphosphates enables its bioanalytical applications in fluorescence visualization of ATP particulate stores in living cells, demonstrating the potential utility of 1-2Zn(II).     

8-Hydroxyquinoline derivative as a fluorescent chemosensor for zinc ion.

8-Hydroxyquinoline derivative 1 as a fluorescent chemosensor for Zn2+ was synthesized. Because Cd2+ is often found with Zn2+ in the environment and can form fluorescent complexes with chelating fluorophores, a potentially important property of chemosensors for Zn2+ is their selectivity for Zn2+ over Cd2+. The Zn2+ or Cd2+ complexes of 1 gave an emission band from the 1:1 complex, but the fluorescence intensity for Cd2+ was a half of that for Zn2+. Ligand 1 is suited for use as a fluorescent chemosensor for Zn2+.     

Stereochemical and regiochemical trends in the selective detection of saccharides

Several discreet sugar-boronate complexes exist in solution. This is due to the complex equilibria between isomeric species of even the simplest monosaccharides. In the current investigation, we determine the regio- and stereochemical features of the various equilibrating sugar isomers that induce signal transduction in boronic acid chemosensors such as 1 as well as 2 and 3. We present a unique example of a chemosensor (1) that is selective for ribose, adenosine, nucleotides, nucleosides, and congeners. As a result of this study, we are able to predict and achieve selective fluorescence and colorimetric responses to specific disaccharides as a consequence of their terminal sugar residue linkage patterns and configurations. We also find that the combined use of chemosensors exhibiting complementary reactivities may be used cooperatively to obtain enhanced selectivity for ribose and rare saccharides.     

Photophysical studies of anion-induced colorimetric response and amplified fluorescence quenching in dipyrrolylquinoxaline-containing conjugated polymers

The dipyrrolylquinoxaline (DPQ)-containing monomer and polymers were synthesized and employed as chromogenic and fluorescent chemosensors for inorganic anions. We have found that in the presence of fluoride or pyrophosphate, the receptors do not form hydrogen bonds between the pyrrole protons and anions. The colorimetric responses and fluorescence quenching in these chemosensors are indeed the result of deprotonation of the N-H proton. The anion selectivity is primarily determined by the relative basicity of anions. The sensitivity of DPQ-based chemosensor was found to display a 34-fold enhancement by incorporation into the conjugated polymer. The anion-induced deprotonation generates low-energy, non-fluorescent trapping sites and is responsible for the signal amplification where the quenching of the excited state occurs from the deprotonated DPQ site in the network by rapid exciton migration along the polymeric backbone.     

Organic heterocyclic-based colorimetric and fluorimetric chemosensors for the detection of different analytes: a review (from 2015 to 2022)

Heterocyclic organic compounds, also called heterocycles, are any major class of organic compounds having at least one atom other than carbon in the ring. Due to their excellent electronic and structural features, these compounds exhibit a wide range of biological and nonbiological applications. Among these, indole, benzimidazole, benzothiazole, and benzoxazole are versatile organic heterocyclic compounds widely used in different fields. They show a wide range of applications in polymer, coordination chemistry, pharmacy, dyes, food packages, medicine, and industries. These compounds contain heteroatoms like S-, N-, and O-, through which they interact with metal ions, anions, and neutral species, giving measurable analytical signals that can be used as fluorimetric and colorimetric chemosensors for detecting different analytes in biological, agricultural and environmental samples. This review summarizes indole, benzimidazole, benzothiazole, and benzoxazole-based fluorimetric and colorimetric chemosensors for detecting metal ions, anions, and neutral species. Furthermore, the recognition mechanisms have been discussed in detail, which could help researchers to design efficient, highly selective, and sensitive chemosensors to recognize and determine heavy metal cations.     

Facile synthesis of rhodamine-based highly sensitive and fast responsive colorimetric and off-on fluorescent reversible chemosensors for Hg2+: preparation of a fluorescent thin film sensor

Fluorescence-active chemosensors (L1-L4), comprising a rhodamine scaffold and a pseudo azacrown cation-binding subunit, have been proposed and characterized as a fluorescent chemosensor for Hg(2+). An on-off type fluorescent enhancement was observed by the formation of the ring-opened amide form of the rhodamine moiety, which was induced by the interactions between Hg(2+) and the chemosensor. Upon the addition of Hg(2+), an overall emission change of 350-fold was observed, and the selectivity was calculated to be 300 times higher than Cu(2+) for receptors L2-L4. A polymeric thin film can be obtained by doping poly(methyl methacrylate) or PMMA with chemosensor L2. Such a thin film sensor can be used to detect Hg(2+) with high sensitivity and can be recovered using diluted NaOH.     

Luminescent chemosensors based on semiconductor quantum dots

Semiconductor quantum dots are inorganic nanoparticles with unique photophysical properties. In particular, their huge one- and two-photon absorption cross sections, tunable emission bands and excellent photobleaching resistances are stimulating the development of luminescent probes for biomedical imaging and sensing applications. Indeed, electron and energy transfer processes can be designed to switch the luminescence of semiconductor quantum dots in response to molecular recognition events. On the basis of these operating principles, the presence of target analytes can be transduced into detectable luminescence signals. In fact, luminescent chemosensors based on semiconductor quantum dots are starting to be developed to detect small molecules, monitor DNA hybridization, assess protein-ligand complementarities, test enzymatic activity and probe pH distributions. Although fundamental research is still very much needed to understand further the fundamental factors regulating the behavior of these systems and refine their performance, it is becoming apparent that sensitive probes based on semiconductor quantum dots will become invaluable analytical tools for a diversity of applications in biomedical research.     

CMOS-Based Bio/Chemosensor and Bioelectronic Microsystems

Microfabrication techniques and, in particular, complementary-metal-oxide-semiconductor (CMOS) technology have been used to devise chemo/biosensors [1-3] as well as bioelectronic microsystems [4-7]. Examples of micromachined bio- or chemosensors, such as cantilevers or micoelectrode arrays, will be shown, and the electrical interfacing of CMOS microelectronics with biological entities or electrogenic cells, i.e., cells that react upon electrical stimulation and, in turn, produce electrical signals (heart cells or neurons) are detailed. CMOS-based, fully integrated microelectrode arrays for bidirectional communication (stimulation and recording) with electrogenic cells are presented. These devices are capable of monitoring relevant electrophysiological responses of cells to electrical stimuli or to pharmacological agents with prospective applications in the field of bio-inspired information processing or pharmascreening.