1-Methylthio-1-phenyl-1-silacyclohexane: Synthesis,conformational preferences in gas and solution by GED,NMR and theoretical calculations

1-Methylthio-1-phenyl-1-silacyclohexane 1, the first silacyclohexane with the sulfur atom at silicon, was synthesized and its molecular structure and conformational preferences studied by gas-phase electron diffraction (GED) and low temperature ¹³C and ²⁹Si NMR spectroscopy (LT NMR). Quantum-chemical calculations were carried out both for the isolated species and solvate complexes in gas and in polar medium. The predominance of the 1-MeS_axPh_eq conformer in gas phase (1-Ph_eq:1-Ph_ax = 55:45, ΔG° = 0.13 kcal/mol) determined from GED is consistent with that measured in the freon solution by LT NMR (1-Ph_eq:1-Ph_ax = 65:35, ΔG° = 0.12 kcal/mol), the experimentally measured ratios being close to that estimated by quantum chemical calculations at both the DFT and MP2 levels of theory.     

Synthesis,conformational preferences in gas and solution,and molecular gear rotation in 1-(dimethylamino)-1-phenyl-1-silacyclohexane by gas phase electron diffraction (GED), LT NMR and theoretical calculations

1-(Dimethylamino)-1-phenyl-1-silacyclohexane 1, was synthesized, and its molecular structure and conformational properties studied by gas-phase electron diffraction (GED), low temperature ¹³C NMR spectroscopy and quantum-chemical calculations. The predominance of the 1-Ph_ax conformer (1-Ph_eq:1-Ph_ax ratio of 20:80%, ΔG°(317?K)?=??0.87?kcal/mol) in the gas phase is close to the theoretically estimated conformational equilibrium. In solution, low temperature NMR spectroscopy showed analyzable decoalescence of C_ipso and C(1,5) carbon signals in ¹³C NMR spectra at 103?K. Opposite to the gas state in the freon solution employed (CD₂Cl₂/CHFCl₂/CHFCl₂?=?1:1:3), which is still liquid at 100?K, the 1-Ph_eq conformer was found to be the preferred one [(1-Ph_eq: 1-Ph_ax?=?77%: 23%, K?=?77/23?=?2.8; ?ΔG°?=??RT ln K (at 103?K)?=?0.44?±?0.1?kcal/mol]. When comparing 1 with 1-phenyl-1-(X)silacylohexanes (X?=?H, Me, OMe, F, Cl), studied so far, the trend of predominance of the Ph_ax conformer in the gas phase and of the Ph_eq conformer in solution is confirmed.     

Synthesis of 3-fluoro-3-methyl-3-silatetrahydropyran and its conformational preferences in gas and solution by GED,NMR and theoretical calculations

The 3,3-disubstitued 3-silaheterocyclohexane with an electronegative substituent at silicon, 3-fluoro-3-methyl-3-silatetrahydropyran 1, was synthesized, and its molecular structure and conformational properties studied by gas-phase electron diffraction (GED) and low temperature ¹³C and ¹⁹F NMR spectroscopy. Quantum-chemical calculations were carried out both for the isolated species and H-complexes in gas and in polar medium. The predominance of the 1-F_eqMe_ax conformer (1-F_eq:1-F_ax ratio of 65:35, ΔG°?=?0.37?kcal/mol) determined from GED is close to the theoretically estimated conformational equilibrium, especially at the DFT level. In solution, low temperature NMR spectroscopy showed no decoalescence of the signals in ¹³C (down to 95?K) and ¹⁹F NMR spectra (down to 123?K). However, the calculated ¹⁹F chemical shift of ?173.6?ppm for the 1-F_eqMe_ax conformer practically coincides with the experimentally observed value (?173 to ?175?ppm) as distinct from that for the 1-F_axMe_eq conformer (?188.8?ppm), suggesting compound 1 to be anancomeric in solution, in compliance with its theoretical and experimental preference in the gas phase.     

Synthesis and conformational analysis of 1,3-azasilinanes

1-Isopropyl-3-methyl-3-phenyl-1,3-azasilinane 1 and 1-isopropyl-3,3-dimethyl-1,3-azasilinane 2 were synthesized and a detailed analysis of their NMR spectra, conformational equilibria and ring inversion processes is presented. Low temperature ¹H/¹³C NMR spectroscopy, iteration of the ¹H NMR spectra and quantum chemical calculations showed slight predominance of the Ph_eqMe_ax over the Ph_axMe_eq conformer of 1 at low temperature. The barrier for the chair to chair interconversion of both compounds was measured to be 8.25 kcal/mol.     

Conformational preferences of Si–Ph,H and Si–Ph,Me silacyclohexanes and 1,3-thiasilacyclohexanes. Additivity of conformational energies in 1,1-disubstituted heterocyclohexanes

The conformational equilibria of 1-phenyl-1-silacyclohexane 1, 3-phenyl-1,3-thiasilacyclohexane 2, 1-methyl-1-phenyl-1-silacyclohexane 3, and 3-methyl-3-phenyl-1,3-thiasilacyclohexane 4 have been studied for the first time by low temperature ¹³C NMR spectroscopy at 103 K. Predominance of the equatorial conformer of compound 1 (Ph_eq/Ph_ax=78%:22%) is much less than in its carbon analog, phenylcyclohexane (nearly 100% of Ph_eq). And in contrast to 1-methyl-1-phenylcyclohexane, the conformers with the equatorial Ph group are predominant for compounds 3 and 4: at 103 K, Ph_eq/Ph_ax ratios are 63%:37% (3) and 68%:32% (4). As the Si–C bonds are elongated with respect to C–C bonds, the barriers to ring inversion are only between 5.2–6.0 (ax→eq) and 5.4–6.0 (eq→ax) kcal mol^?1. Parallel calculations at the DFT and MP2 level of theory (as well as the G2 calculations for compound 1) show qualitative agreement with the experiment. The additivity/nonadditivity of conformational energies of substituents on cyclohexane and silacyclohexane derivatives is analyzed. The geminally disubstituted cyclohexanes containing a phenyl group show large deviations from additivity, whereas in 1-methyl-1-phenyl-1-silacyclohexane and 3-methyl-3-phenyl-1,3-thiasilacyclohexane the effects of the methyl and phenyl groups are almost additive. The reasons for the different conformational preferences in carbocyclic and heterocyclic compounds are analyzed using the homodesmotic reactions approach.     

Synthesis and novel reactivities of several 1,9-dithiaalkane-bridged thianthrene 10-oxides

The irreversible photolytic axial to equatorial change (3ax-4ax→3eq-4eq) and the irreversible thermal equatorial to axial change (3eq-4eq→3ax-4ax) of the S-O configuration were first observed. Meanwhile, the shorter 1,9-bridged derivative (2ax) exhibited the interesting photolytic degradation, affording 1,9-dithiadibenzothiophene (5) by the elimination of SO and ethylene.     

Molecular structure and conformational preferences of 1-bromo-1-silacyclohexane, CH2(CH2CH2)2SiH-Br, as studies by gas-phase electron diffraction and quantum chemistry

The molecular structure of axial and equatorial conformer of the 1-bromo-1-silacyclohexane molecule, CH₂(CH₂CH₂)₂SiH-Br, as well as thermodynamic equilibrium between these species are investigated by means of gas-phase electron diffraction and quantum chemistry on the MP2(full)/SDB-AUG-cc-PVTZ level of theory. It is revealed that according to electron diffraction data, the compound exists in the gasphase as a mixture of conformers possessing the chair conformation of the six-membered ring and C _s symmetry and differing in the axial and equatorial position of the Si-Br bond (ax. = 80(5) mol %, eq. = 20(7) mol %) at 352 K, that corresponds to the value of A = (G _ax ^?? ? G _eq ^?? ) = ?0.82(32) kcal/mol. It is found that observed data agree well with theoretical ones. Using Natural Bond Orbital (NBO) analysis it is revealed that axial conformer of 1-bromo-1-silacyclohexane molecule is an example of the stabilization of the form that is unfavorable from the point of view of steric effects and effects of conjugations. It is concluded that stabilization is achieved due to electrostatic interactions.     

Tetraphenylphosphonium carboxylates and sulfonates. Synthesis and structure

The reaction of the pentaphenyphosphorus solvate Ph₅P·1/2PhH (I) with carboxylic and sulfonic acids was used to synthesize tetraphenylphosphonium carboxylates Ph₄POC(O)R, R = C₆H₄(2-OH) (II), C₆H₄ (2-COOH) (III), H (IV), Me (V), CCl₃ (VI), Ph (VII), PhCH=CH (VIII), CH₂CH₂C(O)OH (IX), CH=CHC(O) OH(X), and CH₂C(O)OH (XI) and tetraphenylphosphonium sulfonates Ph₄POSO₂Ar, Ar = Ph (XII), C₆H₄Me₄ (XIII), and C₆H₃(-COOH)(4-OH) (XIV). Compound XII was also prepared from compound I and SO₃ in benzene. According to X-ray diffraction data, the crystals of I contain two types of crystallographically independent molecules with a slightly distorted trigonal-bipyramidal configuration [Ia, CaxPCax 178.44(8)°, P- C_ax 1.985(2), 1.987(2) Å, P-C_eq 1.854(2), 1.846(2), 1.840(2) Å; Ib, C_axPC_ax 178.45(9)°, P-C_ax 1.980(2), 1.975 (2) Å, P-C_eq 1.840(2), 1.846(2), 1.854(2) Å]. In the cations of compounds II, III and XIV, the coordination of the phosphorus atom is tetrahedral [CPC angle: II, 106.2(2)?111.6(1)°; III, 104.01(6)?113.03(6)°; XIV, 107.54 (6)?112.79(6)°]; the anions contain intramolecular O-H?O hydrogen bonds between the hydroxyl hydrogen atom and carboxyl oxygen atom (II, 1.34; III, 1.23; and XIV, 1.83 Å).     

Molecular conformations of jet-cooled 2-methylindan and 2-phenylindan

The molecular conformations of jet-cooled 2-methylindan (2MI) and 2-phenylindan (2PI) have been studied using resonant-enhanced two-photon ionization spectroscopy in combination with ab initio calculations. Both axial (2MI_ax) and equatorial (2MI_eq) conformers of 2MI have been observed. A 2MI_eq/2MI_ax conformer ratio of 2.3 was estimated at 298 K, leading to the energy difference, \Updelta E = E _{2 \textMI\textax} - E _{2 \textMI\texteq} \Updelta E = E_{{ 2 {\text{MI}}_{\text{ax}} }} - E_{{ 2 {\text{MI}}_{\text{eq}} }} , of 0.49 kcal/mol. Ab initio calculations predicted three stable conformers of 2PI: two equatorial conformers (2PI_eq0 and 2PI_eq90), and one axial conformer (2PI_ax). Only the axial conformer of 2PI (2PI_ax) was experimentally observed. The indan ring of 2PI_ax is slightly more planar than the indan rings of the two equatorial conformers of 2PI because of the intramolecular C_sp2–H/π interactions in 2PI_ax. The equatorial conformers of 2PI relax to the more stable axial conformer because of the high pre-expansion temperature (383 K), and relatively low barrier (1.68 kcal/mol) to axial–equatorial interconversion. The barrier (2.33 kcal/mol) to axial–equatorial interconversion in 2MI is high enough to prevent conformational relaxation at the pre-expansion temperature of 298 K. Intramolecular C–H/π interactions are found to be more important in determining the conformational preference of 2PI than 2MI; this can be attributed to the higher acidity of the C_sp2–H bond than that of C_sp3–H bond.     

Synthesis and Structure of 2-tert-Butylphenoxytetraphenylantimony

2-tert-Butylphenoxytetraphenylantimony Ph₄SbOC₆H₄(Bu-t)-2 was prepared by the reaction of pentaphenylantimony with 2-tert-butylphenol in toluene at 20°. The structure of the obtained compound was determined by X-ray diffraction. The Sb atom in this compound has a distorted trigonal-bipyramidal coordination with the aroxy group in the axial position. The Sb–C(Ph)_eqand Sb–C(Ph)_axdistances are 2.111(7)–2.138(7) and 2.180(7) Å the Sb–O and O–C_Ardistances are 2.143(4) and 1.363(8) Å, respectively. The C(Ph)_axSbO_Araxial angle is 174.1(2)°, while the SbOC angle is 126.7(4)°.     

Molecular structures of phosphorus compounds: Part VIII. Electron diffraction study of phenyltetrafluorophosphorane

The molecular structure of phenyltetrafluorophosphorane is determined in the gas phase using electron diffraction. The following geometric parameters (r_g values) are obtained: P-F_ax = 1.616(4) a, P-F_eq = 1.531(4) a, P-C = 1.796(9) a, C-C = 1.396(3) a, ∠F_eqPF_eq = 115.6(1.4)°, ∠F_axPC = 93.0(0.5)°, τ = 72.9(3.6)°. τ is the dihedral angle between the phenyl group and the equatorial plane of the PF₄ group. These results are compared to the molecular structures of methyl-and ethynyltetrafluorophosphorane.     

Synthesis and structure of tetraphenylantimony hydrogenmalonate

Tetraphenylantimony hydrogenmalonate (I) has been prepared via a reaction between equimolar amounts of pentaphenylantimony and malonic acid with a yield of 91%. According to X-ray diffraction data, the antimony atom in a molecule of complex I has a distorted trigonal bipyramidal coordination to the oxygen and carbon atoms in axial positions. The Sb-C_eq, Sb-C_ax, and Sb-O distances equal 2.105(3), 2.107(3), and 2.118(3) Å, 2.148(3) Å, and 2.406(4) Å, respectively, and the C_axSbO_ax angle is 176.91(11)°.     

Tetraphenylantimony <Emphasis Type="Italic">N</Emphasis>-benzoylglycinate: synthesis and structure

Tetraphenylantimony N-benzoylglycinate (I) has been synthesized by the reaction between pentaphenylantimony and N-benzoylglycine in toluene. According to X-ray diffraction data, the antimony atom in a molecule of complex I has a trigonal bipyramidal coordination to the oxygen atom in axial position. The Sb?C_eq, Sb?C_ax, and Sb?O bond lengths are 2.116(6)?2.138(6), 2.183(6), and 2.200(4) Å, respectively. The intramolecular Sb?O=C distance between the carbonyl oxygen atom and the central antimony atom is 3.35(2) Å.     

Structural study of complex [Rh(NH3)5(NO2)](NO3)2·H2O, [Rh(NH3)5(NO2)][Pd(NO2)4], and K2[Rh(NH3)(NO2)5]·H2O salts

Compounds [Rh(NH₃)₅(NO₂)](NO₃)₂·H₂O (I) with a = 7.6230(3) Å, b = 7.6230(3) Å, c = 10.3584(4) Å, space group I-42m, Z = 2, d _calc = 2.026 g/cm³, V = 601.93(4) ų, Rh-NH_{3 eq} = 2.074 Å, Rh-NH_{3 ax} (NO₂) = 2.048 Å; [Rh(NH₃)₅(NO₂)][Pd(NO₂)₄] (II) with a = 8.095(3) Å, b = 22.422(8) Å, c = 7.887(3) Å, β = 98.559(17)°, space group Cc, Z = 4, d _calc = 2.461 g/cm³, V = 1415.6(9) ų, Rh-NH_{3 eq} = 2.069 Å, Rh-NH_{3 ax} = 2.090 Å, Rh-NO₂ = 2.002 Å; K₂[Rh(NH₃)(NO₂)₅]·H₂O (III) with a = 7.5177(5) Å, b = 20.9856(15) Å, c = 7.7017(5) Å, space group Cmc2₁, Z = 4, d _calc = 2.439 g/cm³, V = 1215.05(14) ų, Rh-NH_{3 ax} (NO₂) = 2.094 Å, Rh-NO_{2 eq} = 2.030 Å are synthesized and studied using single crystal X-ray diffraction.     

Self-assembly of diorganotin(IV) 2-{[(E)-1-(2-oxyaryl)alkylidene]amino}acetates: An investigation of structures by X-ray diffraction, solution and solid-state tin NMR, and electrospray ionization MS

The diorganotin(IV) compounds, [Me₂SnL²(OH₂)]₂ (1), [ⁿBu₂SnL²(OH₂)]₂ (2), [ⁿBu₂SnL¹]₃ · 0.5C₃H₆O (3), [ⁿBu₂SnL³]₃ · 0.5C₆H₆ (4) and [Ph₂SnL³]_n · 0.5C₆H₆ (5) (L = carboxylic acid residue, i.e., 2-{[(E)-1-(2-oxyaryl)alkylidene]amino}acetate), were synthesized by treating the appropriate diorganotin(IV) dichloride with the potassium salt of the ligand in anhydrous methanol.The reaction of Ph₂SnL² (L = 2-{[(E)-1-(2-oxyphenyl)ethylidene]amino}acetate) with 1,10-phenanthroline (Phen) yielded a 1:1 adduct of composition, [Ph₂SnL²(Phen)] (6).The crystal structures of 1-6 were determined.The crystal of 1 is composed of centrosymmetric dimers of the basic Me₂SnL²(OH₂) moiety, where the two Sn-centres are linked by two asymmetric Sn-O?Sn bridges involving the carboxylic acid O atom of the ligand and a long Sn?O distance of 3.174(2) Å.The dimers are further linked into columns by hydrogen bonds.The coordination geometry about the Sn atom is a distorted pentagonal bipyramid with the two methyl groups in axial positions.The structure of 2 is similar.The same Sn atom coordination geometry is observed in compound 3, which is a cyclic trinuclear[ⁿBu₂SnL¹]₃ compound. Each Sn atom is coordinated by the phenoxide O atom, one carboxylate O atom and the imino N atom from one ligand and both the exo- and endo-carboxylate O atoms (mean Sn-O(exo): 2.35 Å; Sn-O(endo): 2.96 Å) from an adjacent ligand to form the equatorial plane, while the two butyl groups occupy axial positions. Compound 4 was found to crystallize in two polymorphic forms. The Sn-complex in both forms has a trinuclear [ⁿBu₂SnL³]₃ structural motif similar to that found in 3. In compound 5, distorted trigonal bipyramidal Ph₂SnL³ units are linked into polymeric cis-bridged chains by a weak Sn?O interaction (3.491(2) Å) involving the exocyclic O atom of the tridentate ligand of a neighboring Sn-complex unit. This interaction completes a highly distorted octahedron about the Sn atom, where the weakly coordinated exocyclic O atom and one phenyl group are trans to one another. In contrast, a monomeric distorted pentagonal bipyramidal geometry is found for adduct 6 where the Sn-phenyl groups occupy the axial positions. The solution and solid-state structures are compared by using ¹¹⁹Sn NMR chemical shift data. Compounds 1-6 were also studied using ESI-MS and their positive- and negative-ions mass fragmentation patterns are discussed.     

Syntheses and spectra of triphenyltin heteroarenethiolates: Crystal structures of triphenyltin 1-methyltetrazole-5-thiolate and triphenyltin benzoxazole-2-thiolate

Reactions between Ph₃SnCl and the sodium salts of 5-mercapto-1-methyltetrazole (MTS-H), 2-mercaptobenzoxazole (MBZ-H), 2-mercaptobenzothiazole (MBT-H) and 2-mercapto-1-methylimidazole (MMI-H) gave Ph₃Sn(MTS) (5: R=Ph, R′=Me), Ph₃Sn(MBZ) 6, Ph₃Sn(MBT) 7 and Ph₃Sn(MMI) 8, respectively. Characterisation has been carried out for all compounds by IR, Mössbauer, ¹H, ¹³C and ¹¹⁹Sn NMR spectroscopy as well as by X-ray crystallography for (5: R=Ph, R′=Me) and 6. Both (5: R=Ph, R′=Me) and 6, in the solid state, have cis-trigonal bipyramidal geometries due to intramolecular Sn–N(2) interactions. Mössbauer data for 7 was interpreted as indicating a similar cis-trigonal bipyramid geometry. The chelating ability of nitrogen-containing heteroarenethiolato groups, based on the strength of Sn–N inter-molecular bonds in Ph₃SnS-heteroarenes, decreases in the sequence: pyridine-2-thiolato>pyrimidine-2-thiolato>1-methylimidazole-2-thiolato>benzoxazole-2-thiolato>1-methyltetrazole-5-thiolato>1-phenyltetrazole-5-thiolato. On dissolution, the Sn–N interactions in 5–8 undergo at least partial breakage.     

Preparation and some reactions of organogermylmercuryplatinum complexes and related compounds

A single-crystal X-ray diffraction study of tetracarbonyl-ferra-3-cyclopentene-2,5-dione has been made. Formally the compound can be derived from maleic anhydride by substitution of the bridging oxygen by Fe(CO)₄. Accordingly the bonding character is similar to that of maleic anhydride. The ironcarbon distances in the ring indicate partial double bonds. The octahedrally coordinated iron atom is linked to four terminal carbon monoxide ligands, with a longer bond distance to the equatorial than to the axial ones (FeC_ax 1.809 Å, FeC_eq 1.854 Å). The axial CO groups are strongly inclined towards the ring (C_axFeC_ax 164°). The latter effect is explained by electronic repulsion of the CO groups.IR, ¹H NMR, and ¹³C NMR data are reported. Crystal data: space groupPnama:α  12.708(10),b  10.058(7),c  7.527(5) Å;Z  4. With 625 reflections [F_o > 3o(F_o)] the structure has been refined anisotropically (hydrogen isotropically) to R0.022.     

Synthesis and Structure of Tetraphenylantimony 2-Furoinate and Benzoate

Tetraphenylantimony 2-furoinate Ph₄SbOC(O)C₄H₃O is synthesized by the reaction of pentaphenyl-antimony with triphenylantimony bis(2-furoinate). The structure of the compound is determined by X-ray diffraction analysis. The Sb atom in the compound has a distorted trigonal-bipyramidal coordination with the phenyl and 2-furoinate groups in the axial positions. The Sb(1)–C(Ph)_eq distances lie in the 2.119(1)–2.121(1) Å interval; the Sb–O(1) and Sb–C(Ph)_ax bond lengths are equal to 2.273(1) and 2.161(1) Å, respectively; and the Sb(1)···(2) intramolecular contact is 3.234(1) Å.     

Phosphinsubstituierte chelatliganden: XI. NMR-spektroskopische untersuchungen (1H, 13C, 31P, 55Mn) an halogentricarbonylmangan-chelatkomplexen mit phosphino-thioformamid- und -thioformimidoester-liganden

A series of halotricarbonylmanganese chelate complexes, fac-(CO)₃Mn(X)L (X = Cl (a), Br (b), I (c)), with thioformamide (L = Ph₂PC(S)NRMe; R = H (1), Me (2), Ph (3)) and the isomeric thioformimidoester (L = Ph₂PC(NR)SMe; R = Me (4), Ph (5)) ligands were prepared by thermal CO substitution of the pentacarbonylmanganese halides. The IR and NMR data indicate P,S-coordination of the ambidentate ligands and uniform Z configuration in 3–5. Due to the large linewidth of the NMR signals, the ⁴J(PH) and ³J(PC) coupling constants could not be determined for the thioamide complexes 1–3. Coordination of the thioimide 4 causes an increase in ⁴J(PH) whereas ³J(PC) remains unchanged. δ(³¹P) shows a downfield coordination shift as usual for manganese complexes. The broad ⁵⁵Mn NMR signals cover a range of +90 to ?730 ppm (rel. KMnO₄) with the imidoester complexes 4 and 5 at the low-field side. The normal halogen dependence Cl < Br < I is observed for ⁵⁵Mn shielding.     

To what extent does the substituent conformation influence the kinetics of addition reactions on 5X-bicyclo[4.4.0]decan-2-ones?

Stereochemistry and relative rates k_ax and k_eq of addition reactions on the title compounds have been measured under four different reaction conditions (CH₃MgI in Et₂O and C₆H₆, and CH₃Li in Et₂O at 20°C and −78°C). In strict accordance with previous findings we show that the axial substituents are far less electronegative than their equatorial counterparts in equatorial attack reactions. Axial attack, however, is independent of the substituent conformation.