Chemical ionization mass spectra of 2, 4, 6-trinitroaromatic compounds

The methane and isobutane chemical ionization mass spectra of ten 2,4,6-trinitroaromatic compounds have been recorded. The mass spectra contain intense [M + 1]⁺ ions and usually little fragmentation. However, in some cases major fragmentation processes have been observed. Some unusual adduct ions have been found with isobutane as the reagent and their temperature dependence has been studied.     

Conformational effects in the chemical ionization spectra of derivatives of isomeric 2,3-dimethyl-1,4-cyclopentanediols

The chemical ionization mass spectra of the trimethylsilyl and methylboronate derivatives of some isomeric 2,3-dimethyl-1,4-cyclopentanediols have been determinded using methane and isobutane as reagent gases. The degree of loss of TMSOH or CH₃B(OH)₂ appears to be strongly dependent upon the stereochemistry of the 2,3-dimethyl-1,4-cyclopentanediol moiety and permits differentiation between the structural isomers. The results obtained from the chemical ionization (isobutane) spectra of the methylboronates are in excellent agreement with those derived from infrared data.     

Chemical ionization and electron impact mass spectra of alicyclic substituted 2-aryl-1,3-dithianes

The methane and isobutane chemical ionization mass spectra of alicyclic substituted 2-aryl-1,3-dithianes were examined by gas chromatography mass spectrometry. The protonated molecular ion was found to be of low abundance in the methane spectra, while a protonated cyclic sulfide cation (m/z 107) appeared as the base peak. A protonated molecular ion was the base peak when isobutane was used as the reagent gas. Electron impact mass spectra displayed weak molecular ions and were characterized by the m/z 106 fragment.     

Electron impact and chemical ionization mass spectra of some tetra-acetylated anomeric glycosides

Electron impact and chemical ionization (CH₄, iso-C₄H₁₀ and NH₃) mass spectra of some tetra-acetylated anomeric glycosides have been examined with a view to the characterization of anomeric pairs. Minor differences observed in the relative intensities of common ions in the anomeric pairs in the electron impact mass spectra are found to be enhanced in the methane and isobutane chemical ionization mass spectra. In the absence of thermal decomposition, the β-anomers show greater ion abundances of common glycosyl ions than the α-anomers. Ammonia chemical ionization mass spectra show complementary behaviour indicating strong adduct ions and practically no fragmentation.     

Accurate mass measurements of positive ions in the desorption chemical ionization mode

Desorption chemical ionization mass spectrometry employing ammonia as the reagent gas has been extensively used to obtain molecular mass and structural information on a wide variety of compounds. Mass-deficient reference standards normally used for calibration purposes in mass spectrometry do not provide adequate mass spectra under ammonia chemical ionization conditions. In order to overcome this problem a mixture of ammonia and methane as reagent gases was employed. In high-resolution accurate mass measurement experiments, this gas mixture allows the simultaneous detection of mass spectra of perfluorokerosene adequate for calibration purposes and spectra containing molecular mass information of the analyte. A needle valve system was used to control the composition of the gas mixture introduced into the ion source. For positive-ion accurate mass measurements of higher masses (up to m/z = 2300), Fomblin 18/8 oil was successfully used as a reference standard under ammonia, methane and isobutane desorption chemical ionization conditions.     

The chemical ionization mass spectra of 2-tert-butyl-substituted 1,3-cycloalkanediol diacetates and dimethyl ethers

The chemical ionization (CI) mass spectra of the 2-tert-butyl-substituted 1,3-cyclopentane- and 1,3-cyclohexanediol diacetates and dimethyl ethers have been determined using isobutane and methane as reagent gases. From the differences in the spectra of these compounds, it clearly follows that steric and conformational effects are expresssed in the CI mass spectra. The relative impact of these effects, however, is strongly dependent on diol derivatization and 2-alkyl substitution.     

Chemical ionization mass spectrometry: A method of estimating reagent gas pressure in the ion source based on kinetic data

Consequential upon determinations of kinetic rate constants of ion/molecule reactions in methane and isobutane, simple equations are presented from which the pressures of methane and isobutane in the ion source of chemical ionization mass spectrometers can be calculated. Account is taken of the design of the ion source and it is only necessary to determine two ion currents for each gas.     

Effects of functional group interactions in the chemical ionization mass spectra of some substituted cis-1,3-cyclopentane dicarboxylic acids and their derivatives

Ammonia, isobutane and methane chemical ionization mass spectra have been measured for some substituted cis-1,3-cyclopentane dicarboxylic acids and their derivatives. The relative proton affinities of the different functional groups determine the protonation site in the molecule and thereby greatly affect the fragmentation. Intramolecular catalysis clearly facilitates the elimination of water in cases where functional groups can interact with each other.     

The mass spectrometry of polychlorinated dibenzo-p-dioxins

The negative ion chemical ionization mass spectra of polychlorinated dibenzo-p-dioxins using oxygen, methane and methane/oxygen are reported together with their methane positive ion chemical ionization mass spectra and conventional electron impact spectra. The methane/oxygen negative ion chemical ionization mass spectra proved to be the most useful of the negative ion spectra for structure determination.     

Electron and chemical ionization mass spectrometry in stereochemical differentiation of some 1,3-amino alcohols

Mass spectral fragmentations of two cyclopentane, eight cyclohexane and four norbornane/one 1,3-amino alcohols were studied under electron ionization (EI) by low-resolution, high-resolution, metastable ion analysis and collision-induced dissociation (CID) techniques. All stereoisomeric compounds gave rise to identical 70 eV EI mass spectra. However, the spectra of positional isomers clearly differed. The main fragmentation pathway for the saturated compounds began as an α-cleavage reaction with respect to the nitrogen atom. For the norbornene compounds a retro-Diels—Alder reaction was favoured. Relative to the aminomethyl-substituted compounds the fragmentation patterns for the compounds having the amino group connected directly to the ring were more complicated. The chemical ionization (CI) mass spectra were recorded using ammonia, isobutane, methane, dichloromethane and acetone as reagent gas. From the norbornane/One compounds the di-exo isomers decomposed more easily than the di-endo isomers with most of the reagent gases used. Differences between stereoisomers were observed directly only under methane CI. The decomposition products of the [M + H]⁺ ions generated under ammonia and isobutane CI were studies by recording their CID mass spectra. These spectra allowed the differentiation of the stereoisomers, at least to some extent.     

Determination of triazine herbicides in surface and drinking waters by off-line combination of liquid chromatography and gas chromatography-mass spectrometry

Summary Mass spectra of 12 triazines were obtained by electron impact (EI), positive-ion chemical ionization (PCI) and negative-ion chemical ionization (NCI) using methane and isobutane as reagent gases. EI mass spectrometry is more sensitive than PCI and NCI, although the chemical ionization modes increase selectivity markedly. A pre-column packed with polymer stationary phase was employed to preconcentrate surface and drinking water samples. After desorption of the analytes with ethyl acetate, an aliquot was injected directly into the GC-MS system. Atrazine and simizine were found in these samples at 10–80 ppt levels. The limits of detection for both herbicides were below 10 ppt in drinking water.     

Low pressure chemical ionization in ion trap mass spectrometry

This article presents the specificities of low pressure chemical ionization in ion trap mass spectrometry. One main feature is the ability to perform chemical ionization with liquid reagents as readily as with "conventional" gases (methane, isobutane and ammonia). The reactivities and analytical applications of gas and liquid reagents are summarized from literature data and are compared when possible.     

Chemical ionization and electron impact mass spectrometry of some organophosphonate compounds

The application of gas chromatography chemical ionization mass spectrometry to the determination of a variety of alkyl alkylphosphonates, phosphonofluoridates, phosphonothiolates and an amidophosphorocyanidate is described. Comparison is made between the electron ionization and chemical ionization mass spectrometry of these compounds. Chemical ionization mass spectrometry is shown to enhance the capability for identification, especially when a limited sample is available. Results indicate that methane is highly useful for obtaining protonated molecular ions and association ions (formed by the transfer of a reactant ion to a sample molecule) as well as meaningful fragment ions. Ionizing ethylene and isobutane gives protonated molecular ions as base peaks for all of the compounds studied, including those where a lower abundance of the [MH]₊ ion is found via methane chemical ionization mass spectrometry. Ethylene is superior to isobutane on the basis of its effectiveness for serving as both a carrier and a reagent gas and gives better sensitivity. Although not an intrinsic part of this present study, analytical sensitivities in the subnanogram range were found.     

Fragmentation in chemical ionization mass spectrometry and the proton affinity of the departing neutral

Chemical ionization mass spectra of six 5,6-dihydro-2-methyl-1,4-oxathiins, and some of the sulfoxides and sulfones derived therefrom, have been determined employing hydrogen, methane and isobutane as reagent gases. The major fragmentation reaction of the protonated molecule, [R′COX·H]⁺, involves loss of the neutral HX molecule. For the sulfides and sulfones, with X ranging from OH to N(CH₃)C₆H₅, it is observed that the importance of this fragmentation is inversely correlated with the proton affinity of the departing HX molecule in both the H₂ and CH₄ chemical ionization. For the sulfoxides no consistent correlation is observed and this is attributed to the interference of competing and/or consecutive fragmentation reactions. In the isobutane chemical ionization mass spectra only the protonated molecule is observed for most of the compounds studied.     

Chemical ionization spectra of trimethylsilylated amino acids and oligopeptides

The isobutane chemical ionization mass spectra of trimethylsilylated amino acids and oligopeptides are discussed.     

Identification of amino acid thiohydantoin derivatives by chemical ionization mass spectrometry

The chemical ionization mass spectra of 16 amino acid thiohydantoins were examined using isobutane or ammonia as reagent gases. Except for a few cases, including some aromatic amino acids, the chemical ionization spectra were much simpler than the corresponding electron impact spectra. Therefore, the major component in the amino acid thiohydantoin mixture was easily detected by chemical ionization mass spectrometry. The combination of the chemical ionization method and thiohydantoin formation was applied successfully to the sequence analysis of model peptides.     

Differentiation of diastereomeric conduramine derivatives under electron ionization and chemical ionization mass spectral conditions

Diastereomeric conduramine derivatives, i.e., (1R,2S,3R/S,6S)-6-(N-carbomethoxyamino) 1,2-O-isopropylidenecyclohex-4-ene-1,2,3-triol (1 and 2) and their O-acetyl derivatives (3 and 4), were studied using gas chromatography (GC) with electron ionization (EI) and chemical ionization (CI). The EI mass spectra of diastereomeric pairs show consistent differences in the relative abundances of characteristic ions. The EI fragmentation patterns are based on precursor/product ion spectra, high-resolution mass spectrometry (HRMS) and deuterium labelling. The CI spectra show differences from the EI spectra, and the isobutane/CI spectra are much simpler than the methane/CI spectra. The differences shown in the CI spectra are similar to those shown in the product ion spectra of [M+H](+) ions generated under electrospray ionization (ESI) conditions. Theoretical calculations are performed to understand the observed differences. The differences in the relative stabilities of molecular ions, or protonated molecules at different sites, can explain the observed differences in the spectra.     

Sites of protonation in phenothiazines: Methane and ammonia chemical ionization mass spectra

Positive ion methane and ammonia chemical ionization mass spectra for ten phenothiazine derivatives are reported. The fragmentations observed in the chemical ionization mass spectra are rationalized in terms of the location of the added proton. High-resolution measurements are used to confirm empirical formulae of the ions in the mass spectra. Changes in the mass spectra with a change in the chemical ionization reagent gas from methane to ammonia are described. A comparison with positive ion secondary ion mass spectra of the same compounds show that the amount of fragmentation is higher in the secondary ion mass spectra, but the same types of ions are observed in spectra produced by both ionization methods.     

Comparative EI,CI and FAB Mass Spectrometry of Dialkyl and Monoalkyl 2-Chloroethylphosphonates

Abstract

Comparison is made between electron ionization (EI), methane, isobutane and ammonia chemical ionization (CI) and fast atom bombardment (FAB) mass spectrometry of phosphonates related to 2-chloroethylphosphonic acid     

The behaviour of stereoisomeric ions in the gas phase: 3—The case of homosubstituted bicyclooctenes

In the electron impact mass spectroscopy of four 2,3,5,6-bicyclo(2.2.2)–7-octenetetramethoxycarbonyl stereoisomers differences in relative abaundances of product ions and also different fragmentation pathways are observed. The stereospecificity is retained also under positive ion chemical ionization (CI(methane), CI(isobutane)) and negative ion chemical ionization (NICI) (OH^?) conditions. Interesting correlations between fragmentation and molecular symmetry are suggested.