Theoretical study of interaction of urate with li(+), na(+), k(+), be(2+), mg(2+), and ca(2+) metal cations

The geometries and energetics of complexes of Li(+), Na(+), K(+), Be(2+), Mg(2+), and Ca(2+)metal cations with different possible uric acid anions (urate) were studied. The complexes were optimized at the B3LYP level and the 6-311++G(d,p) basis set. Complexes of urate with Mg(2+), and Ca(2+)metal cations were also optimized at the MP2/6-31+G(d) level. Single point energy calculations were performed at the MP2/6-311++G(d,p) level. The interactions of the metal cations at different nucleophilic sites of various possible urate were considered. It was revealed that metal cations would interact with urate in a bi-coordinate manner. In the gas phase, the most preferred position for the interaction of Li(+), Na(+), and K(+) cations is between the N(3) and O(2) sites, while all divalent cations Be(2+), Mg(2+), and Ca(2+) prefer binding between the N(7) and O(6) sites of the corresponding urate. The influence of aqueous solvent on the relative stability of different complexes has been examined using the Tomasi's polarized continuum model. The basis set superposition error (BSSE) corrected interaction energy was also computed for complexes. The AIM theory has been applied to analyze the properties of the bond critical points (electron densities and their Laplacians) involved in the coordination between urate and the metal cations. It was revealed that aqueous solvation would have significant effect on the relative stability of complexes obtained by the interaction of urate with Mg(2+) and Ca(2+)cations. Consequently, several complexes were found to exist in the water solution. The effect of metal cations on different NH and CO stretching vibrational modes of uric acid has also been discussed.     

Effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water coordination on the structure and properties of L-arginine and zwitterionic L-arginine

Interactions between metal ions and amino acids are common both in solution and in the gas phase. The effect of metal ions and water on the structure of L-arginine is examined. The effects of metal ions (Li(+), Na(+), K(+), Mg(2+), Ca(2+), Ni(2+), Cu(2+), and Zn(2+)) and water on structures of Arg x M(H2O)m , m = 0, 1 complexes have been determined theoretically by employing the density functional theories (DFT) and using extended basis sets. Of the three stable complexes investigated, the relative stability of the gas-phase complexes computed with DFT methods (with the exception of K(+) systems) suggests metallic complexes of the neutral L-arginine to be the most stable species. The calculations of monohydrated systems show that even one water molecule has a profound effect on the relative stability of individual complexes. Proton dissociation enthalpies and Gibbs energies of arginine in the presence of the metal cations Li(+), Na(+), K(+), Mg(2+), Ca(2+), Ni(2+), Cu(2+), and Zn(2+) were also computed. Its gas-phase acidity considerably increases upon chelation. Of the Lewis acids investigated, the strongest affinity to arginine is exhibited by the Cu(2+) cation. The computed Gibbs energies DeltaG(o) are negative, span a rather broad energy interval (from -150 to -1500 kJ/mol), and are appreciably lowered upon hydration.     

A computational study on pi and sigma modes of metal ion binding to heteroaromatics (CH)(5-m)X(m) and (CH)(6-m)X(m) (X = N and P): contrasting preferences between nitrogen- and phosphorous-substituted rings

The pi and sigma complexation energy of various heteroaromatic systems which include mono-, di-, and trisubstituted azoles, phospholes, azines and phosphinines with various metal ions, viz. Li(+), Na(+), K(+), Mg(2+), and Ca(2+), was calculated at the post Hartree-Fock MP2 level, MP2(FULL)/6-311+G(2d,2p)//MP2/6-31G. The azoles and azines were found to form stronger sigma complexes than the corresponding pi complexes, whereas the phospholes and phosphinines had higher pi complexation energy with Li(+), Mg(2+), and Ca(2+) while their pi and sigma complexation energies were very comparable with Na(+) and K(+). The strongest pi complex among the five-membered heteroaromatic system was that of pyrrole with all the metals except with Mg(2+), while benzene formed the strongest pi complex among the six-membered heterocyclic systems. The nitrogen heterocyclic system 4H-[1,2,4] triazole and pyridazine formed the strongest sigma complex among the five- and six-membered heteroaromatic systems considered. The complexation energy of the pi and sigma complexes of the azoles and azines was found to decrease with the increase in the heteroatom substitution in the ring, while that of phospholes and phosphinines did not vary significantly. The azoles and azines preferred to form sigma complexes wherein the metal had bidentate linkage, while the phospholes and phosphinines did not show binding mode preference. In the sigma complexes of both azoles and phospholes, the metal binds away form the electron-deficient nitrogen or phosphorus center.     

Studies of polyfunctional O-ligands: Formation and stability of Mg(2+) and Ca(2+) complexes of 1,2,4,5-benzenetetracarboxylic acid in aqueous solution at 25 degrees

The stabilities of the Ca(2+) and Mg(2+) complexes with 1,2,4,5-benzenetetracarboxylic acid (pyromellitic acid) were studied potentiometrically, at 25 degrees . The species ML, MHL, MH(2)L, and M(2)L [L = pyromellitate(4-); M = Ca(2+), Mg(2+)] were found to be present in solution (for Mg(2+) the species MH(3)L was also found). The dependence of the formation constants on ionic strength, and the stability trends of the Ca(2+) and Mg(2+) complexes with carboxylate ligands, are discussed.     

Salt effects on the conformational behavior of 5-carboxy- and 5-hydroxy-1,3-dioxane

The varied and essential involvement of metal ions and inorganic salts in biological and chemical processes motivated the present study where 5-carboxy- and 5-hydroxy-1,3-dioxanes are used as model frameworks for the evaluation of the conformational behavior of oxygen-containing receptors in the presence of Li(+), Na(+), K(+), Ag(+), Mg(2+), Ca(2+), Ba(2+), and Zn(2+). Thus, the position of equilibria, established by means of BF(3), between diastereomeric cis- and trans-5-substituted-2-phenyl-1,3-dioxanes, in solvent THF and in the presence of 0, 1, and 5 equiv of salt, has been determined. The observed Delta G(o) degrees values for the conformational equilibria of 5-carboxy-1,3-dioxane show that Ag(+), Li(+), and Ca(2+) complexation leads to increased stability of the axial isomer. In the case of the 5-hydroxy-1,3-dioxane, Mg(2+), Ag(+), and Zn(2+) are the metal ions that stabilize the axial conformer of the heterocycle upon association. Interpretation of the experimental observations was based on DFT molecular modeling studies at the Becke3LYP/6-31G* and Becke3LYP/6-31+G** levels of theory. Although gas-phase calculations give Delta E values that are too large when modeling equilibria involving ionic species in polar solution, the computational results confirm the structural and energetic consequences of metal cation coordination to the oxygen atom in carbonyls or ethers. The results derived from the present study contribute to our understanding of the chemical processes involved in molecular recognition and physiological events.     

A highly selective on/off fluorescence sensor for cadmium(II)

A polypyridyl ligand, 2,3,6,7,10,11-hexakis(2-pyridyl)dipyrazino[2,3-f:2',3'-h]quinoxaline (HPDQ), was found to have excellent fluorescent selectivity for Cd(2+) over many other metal ions (K(+), Na(+), Ca(2+), Mg(2+), Mn(2+), Fe(2+), Ni(2+), Co(2+), Cu(2+), Ag(+), Hg(2+), Zn(2+), and Cr(3+)) based on the intramolecular charge-transfer mechanism, which makes HPDQ a potential fluorescence sensor or probe for Cd(2+). An obvious color change between HPDQ and HPDQ + Cd(2+) can be visually observed by the naked eye. The structure of the complex HPDQ-Cd has been characterized by X-ray crystallography. Density functional theory calculation results on the HPDQ and HPDQ-Cd complexes could explain the experimental results.     

Hg2+-sensing system based on structures of complexes

The first example of a new Hg(2+)-sensing system based on the structures of complexes is reported. The system uses a combination of a new chiral bidentate ligand and CD spectroscopy. Significant CD spectral changes are observed when Hg(2+) is added, whereas no CD spectral changes are observed in the cases of Li(+), Na(+), K(+), Mg(2+), Ca(2+), Mn(2+), Fe(2+), Co(2+), Ni(2+), Cu(2+), Zn(2+), Rb(+), Ag(+), Cd(2+), La(3+), Gd(3+), and Pb(2+).     

PVC ion-selective electrodes based on calcium bis-[dialkyl- and di-(4-alkylphenyl) phosphates] and mixed solvent mediators

PVC calcium ion-selective electrodes based on either calcium bis-di(n-decyl)phosphate or calcium bis-di[4-(1,1,3,3-tetramethylbutyl)phenyl]phosphate with various solvent mediators (alone or in pairs) have been evaluated with particular respect to interference from Na(+), K(+), Mg(2+), Sr(2+), Ba(2+), Mn(2+), Cu(2+), Ni(2+) and Zn(2+) ions. PVC calcium ion-selective electrodes based on calcium bis-di[4-(n-octyl)phenyl]phosphate with varied amounts of decan-l-ol plus di-n-octyl phenylphosphonate showed a continuous gradation in selectivity coefficients on going from a high fraction of decan-l-ol to a high fraction of the second mediator. Thus, k(pot)(Ca,Mg) changed from 1.6 for an electrode based exclusively on decan-l-ol to 4.9 x 10(-4) for one based completely on di-n-octyl phenylphosphonate. The corresponding k(pot)(Ca,Na) values were 7.0 x 10(-2) and 1.1 x 10(-3).     

Oxidative cyclization of thiosemicarbazone: an optical and turn-on fluorescent chemodosimeter for Cu(II)

A weakly fluorescent thiosemicabazone (L(1)H) was found to be a selective optical and "turn-on" fluorescent chemodosimeter for Cu(2+) ion in aqueous medium. A significant fluorescence enhancement along with change in color was only observed for Cu(2+) ion; among the other tested metal ions (viz. Na(+), K(+), Mg(2+), Ca(2+), Cr(3+), Zn(2+), Cd(2+), Hg(2+), Pb(2+), Ag(+), Ni(2+), Co(2+), Fe(3+) and Mn(2+)). The Cu(2+) selectivity resulted from an oxidative cyclization of the weak fluorescent L(1)H into highly fluorescent rigid 4,5-dihydro-5,5-dimethyl-4-(naphthalen-5-yl)-1,2,4-triazole-3-thione (L(2)). The signaling mechanism has been confirmed by independent synthesis with detail characterization of L(2).     

Interactions of metal ions with monoaza crown ethers A15C5 and A18C6 carrying dansyl fluorophore as pendant in acetonitrile solution

The influence of metal cations Li(+), Na(+), K(+), Cs(+), Mg(2+), Ca(2+), Sr(2+), Ba(2+), Co(2+), Ni(2+), Cu(2+), Zn(2+), Pb(2+) and Al(3+) on the spectroscopic properties of the dansyl (1-dimethylaminonaphthalene-5-sulfonyl) group covalently linked to monoaza crown ethers 1-aza-15-crown-5 (1,4,7,10,-tetraoxa-13-azacyclopentadecane) (A15C5) and 1-aza-crown-6 (1,4,7,10,13-pentaoxa-16-azacyclooctadecane) (A18C6) was investigated by means of absorption and emission spectrophotometry. Interaction of the alkali metal ions with both fluoroionophores is weak, while alkaline earth metal ions interact strongly causing 50 and 85% quenching of dansyl fluorescence of N-(5-dimethylamine-1-naphthalenesulfonylo)-1,4,7,10,-tetraoxa-13-azacyclopentadecane (A15C5-Dns) and N-(5-dimethylamine-1-naphthalenesulfonylo)-1,4,7,10,13-pentaoxa-16-azacyclooctadecane (A18C6-Dns), respectively. The Cu(2+), Pb(2+) and Al(3+) cations interact very strongly with dansyl chromophore, causing a major change in absorption spectrum of the chromophore and forming non-fluorescent complexes. The Co(2+), Ni(2+), Zn(2+), Mg(2+) cations interact moderately with both fluoroionophores causing quenching of dansyl fluorescence by several percent only.     

CO2 adsorption in mono-, di- and trivalent cation-exchanged metal-organic frameworks: a molecular simulation study

A molecular simulation study is reported for CO(2) adsorption in rho zeolite-like metal-organic framework (rho-ZMOF) exchanged with a series of cations (Na(+), K(+), Rb(+), Cs(+), Mg(2+), Ca(2+), and Al(3+)). The isosteric heat and Henry's constant at infinite dilution increase monotonically with increasing charge-to-diameter ratio of cation (Cs(+) < Rb(+) < K(+) < Na(+) < Ca(2+) < Mg(2+) < Al(3+)). At low pressures, cations act as preferential adsorption sites for CO(2) and the capacity follows the charge-to-diameter ratio. However, the free volume of framework becomes predominant with increasing pressure and Mg-rho-ZMOF appears to possess the highest saturation capacity. The equilibrium locations of cations are observed to shift slightly upon CO(2) adsorption. Furthermore, the adsorption selectivity of CO(2)/H(2) mixture increases as Cs(+) < Rb(+) < K(+) < Na(+) < Ca(2+) < Mg(2+) ≈ Al(3+). At ambient conditions, the selectivity is in the range of 800-3000 and significantly higher than in other nanoporous materials. In the presence of 0.1% H(2)O, the selectivity decreases drastically because of the competitive adsorption between H(2)O and CO(2), and shows a similar value in all of the cation-exchanged rho-ZMOFs. This simulation study provides microscopic insight into the important role of cations in governing gas adsorption and separation, and suggests that the performance of ionic rho-ZMOF can be tailored by cations.     

Characterization of silicate monomer with sodium,calcium and strontium but not with lithium and magnesium ions by fast atom bombardment mass spectrometry

Fast atom bombardment mass spectrometry (FABMS) was applied to the direct detection of silica species dissolved in LiCl, NaCl, MgCl(2), CaCl(2) and SrCl(2) solutions in order to investigate its dissolution process in solution. Several species of dissolved silicate complexes in the solution were directly detected by FABMS. The peak intensities of [SiO(2)(OH)(2)Na](-), [SiO(3)(OH)Ca](-) and [SiO(3)(OH)Sr](-) increased with increasing concentrations of NaCl, CaCl(2) and SrCl(2), whereas the peak intensities of [SiO(2)(OH)(2)Li](-) and [SiO(3)(OH)Mg](-) did not increase with increasing concentrations of LiCl and MgCl(2). These results indicte that silicate and cation bind in the solution not after but before ionization. The isotope pattern of Sr(2+) confirmed the existence of the silicate-Sr complex not only with increase of the concentration of silica but also the mass numbers of Sr. The silicate complexes formed with Na(+), Ca(2+) and Sr(2+) showed high stability in chloride solution. This is in good accordance with the fact that Na(+), Ca(2+) and Sr(2+) accelerate the dissolution of silica to form complexes during solution equilibrium. Considering that the stability constant was examined and reported in other papers, this new findings that Mg(2+) does not form a complex with silicic acid (Si(OH)(4)) is very important.     

Adsorption Mechanism and Structure of the Montmorillonite Complexes with (CH(3))(2)XO (X=C, and S), (CH(3)O)(3)PO, and CH(3)-CN Molecules

The formation of complexes with different ligands in the interlayer space of montmorillonite saturated in Na(+), Mg(2+), Ca(2+), Co(2+), Cu(2+), Ni(2+), Fe(3+), and Cr(3+) was studied. Acetone, acetonitrile, dimethyl sulfoxide, and trimethylphosphate were used as ligands. The nature of the complexes was studied by means of X-ray diffraction, infrared spectroscopy, thermogravimetric analysis, microcalorimetry, and ab initio quantum mechanical methods. In all cases, the organic ligands penetrate into the interlayer space at room temperature, forming complexes stable in vacuum with the interlayer cations. The ligand-cation ratio depends on the valence of the saturating cation. The cation-ligand interaction in these complexes has an ion-dipole electrostatic nature. The complexes are formed by the direct interaction of the oxygen or nitrogen atom of ligand and the interlayer cation. Using the quantum mechanical approach, allow us to determine the disposition of the ligand in these complexes. In all cases, only one layer of ligands is present in the stable complexes. Copyright 2000 Academic Press.     

Indirect spectrophotometric determination of sulphide with the ternary complex system Ag(I)-phen-BPR

Trace amounts of sulphide can be determined from its effect on the ternary complex system of Ag(+), Bromopyrogallol Red (BPR), and 1,10-phenanthroline (phen). Sulphide in the range 5-120 ng/ml causes a decrease in absorption, that is a linear function of the concentration. Common metal ions such as Na(+), K(+), Ca(2+), Mg(2+), Al(3+), Mn(2+) and anions such as F(-), Cl(-), NO(-)(3), SO(2-)(4), CO(2-)(3), and PO(3-)(4) at the 4 mug/ml level or more do not interfere, but I(-) or CN(-) must be absent.     

A naphthalene-based Al3+ selective fluorescent sensor for living cell imaging

An efficient fluorescent Al(3+) receptor, N-(2-hydroxy-1-naphthalene)-N'-(2-(2-hydroxy-1-naphthalene)amino-ethyl)-ethane-1,2-diamine (L) has been synthesized by the condensation reaction between 2-hydroxy naphthaldehyde and diethylenetriamine. High selectivity and affinity of L towards Al(3+) in ethanol (EtOH) as well as in HEPES buffer at pH 7.4, makes it suitable to detect intracellular Al(3+) with fluorescence microscopy. Metal ions, viz. Li(+), Na(+), K(+), Mg(2+), Ca(2+), Mn(2+), Co(2+), Ni(2+), Cu(2+), Zn(2+), Ag(+), Cd(2+), Hg(2+) and Pb(2+) do not interfere. The lowest detection limit for Al(3+) is 3.0 × 10(-7) M and 1.0 × 10(-7) M in EtOH and HEPES buffer respectively.     

Fluorescence and NMR binding studies of N-aryl-N'-(9-methylanthryl)diaza-18-crown-6 derivatives

N-Aryl-N'-(9-methylanthryl)diaza-18-crown-6 derivatives perform as fluorescent photoinduced electron-transfer (PET) sensors with very selective response toward Ca(2+) versus Mg(2+), Na(+), and K(+). The fluorescence intensity was increased by a factor of up to 170 in the presence of Ca(ClO(4))(2). (1)H NMR studies show that metal cations affect these molecules very differently: Ca(2+) has a global effect on each molecule, while Mg(2+) affects part of each molecule, and K(+) and Na(+) affect each molecule moderately, which is very consistent with the fluorescence response.     

Incorporation of triazole into a quinoline-rhodamine conjugate imparts iron(iii) selective complexation permitting detection at nanomolar levels

Two new rhodamine based probes 1 and 2 for the detection of Fe(3+) were synthesized and their selectivity towards Fe(3+) ions in the presence of other competitive metal ions tested. The probe 1 formed a coloured complex with Fe(3+) as well as Cu(2+) ions and revealed the lack of adequate number of coordination sites for selective complexation with Fe(3+). Incorporation of a triazole unit to the chelating moiety of 1 resulted in the probe 2, that displayed Fe(3+) selective complex formation even in the presence of other competitive metal ions like Li(+), Na(+), K(+), Cu(2+), Mg(2+), Ca(2+), Sr(2+), Cr(3+), Mn(2+), Fe(2+), Co(2+), Ni(2+), Zn(2+), Cd(2+), Hg(2+) and Pb(2+). The observed limit of detection of Fe(3+) ions (5 × 10(-8) M) confirmed the very high sensitivity of 2. The excellent stability of 2 in physiological pH conditions, non-interference of amino acids, blood serum and bovine serum albumin (BSA) in the detection process, and the remarkable selectivity for Fe(3+) ions permitted the use of 2 in the imaging of live fibroblast cells treated with Fe(3+) ions.     

A novel fluorescent probe for zinc ion based on boron dipyrromethene (BODIPY) chromophore

ZnAB has the combined structure of N,N-bis(2-pyridylmethyl)ethylenediamine as a specific chelater for Zn(2+) and 1,3,5,7-tetramethyl-8-phenyl-boron dipyrromethene as a fluorophore. Complexation of ZnAB with Zn(2+) produces a remarkable enhancement of fluorescence intensity. ZnAB has the advantages of less sensitivity to solvent polarity and pH than fluorescein-based Zn(2+) probes. Furthermore, it is not influenced by other cations, such as Na(+), K(+), Ca(2+), and Mg(2+), which exist at high concentrations under physiological conditions, even at 2.5 mM. The results show that ZnAB is a Zn(2+) probe suitable for biological applications.     

Development and applications of fluorescent indicators for Mg2+ and Zn2+

In a study of the spectroscopic behavior of two Schiff base derivatives, salicylaldehyde salicylhydrazone (1) and salicylaldehyde benzoylhydrazone (2), Schiff base 1 has high selectivity for Zn(2+) ion not only in abiotic systems but also in living cells. The ion selectivity of 1 for Zn(2+) can be switched for Mg(2+) by swapping the solvent from ethanol-water to DMF (N,N-dimethylformamide)-water mixtures. Imine 2 is a good fluorescent probe for Zn(2+) in ethanol-water media. Many other ions tested, such as Li(+), Na(+), Al(3+), K(+), Ca(2+), Cr(3+), Mn(2+), Fe(3+), Co(2+), Ni(2+), Cu(2+), Ag(+), Cd(2+), Sn(2+), Ba(2+), Hg(2+), and Pb(2+), failed to induce any spectral change in various solvents. The selectivity mechanism of 1 and 2 for metal ions is based on a combinational effect of proton transfer (ESPT), C═N isomerization, and chelation-enhanced fluorescence (CHEF). The coordination modes of the complexes were investigated.     

Competitive cesium-133 NMR spectroscopic study of complexation of different metal ions with dibenzo-21-crown-7 in acetonitrile-dimethylsulfoxide and nitromethane-dimethylsulfoxide mixtures

(133)Cs NMR spectroscopy was used to determine the stoichiometry and stability of the Cs(+) ion complex with dibenzo-21-crown-7 (DB21C7) in acetonitrile-dimethylsulfoxide (96.5:3.5, w/w) and nitromethane-dimethylsulfoxide (96.5:3.5, w/w) mixtures. A competitive (133)Cs NMR technique was also employed to probe the complexation of Na(+), K(+), Rb(+), Ag(+), Tl(+), NH(4)(+), Mg(2+), Ba(2+), Hg(2+), Pb(2+) and UO(2)(2+) ions with DB21C7 in the same solvent systems. All the resulting 1:1 complexes in nitromethane-dimethylsulfoxide were more stable than those in acetonitrile-dimethylsulfoxide solution. In both solvent systems, the stability of the resulting complexes was found to vary in the order Rb(+)>K(+) approximately Ba(2+)>Tl(+)>Cs(+)>NH(4)(+) approximately Pb(2+)>Ag(+)>UO(2)(2+)>Hg(2+)>Mg(2+)>Na(+).