Glucose-derived 3'-(carboxymethyl)-3'-deoxyribonucleosides and 2', 3'-lactones as synthetic precursors for amide-linked oligonucleotide analogues

Treatment of a 1,2-O-isopropylidene-3-ketopentofuranose derivative (obtained from D-glucose) with [(ethoxycarbonyl)methylene]triphenylphosphorane and catalytic hydrogenation of the resulting alkene gave stereodefined access to 3-(carboxymethyl)-3-deoxy-D-ribofuranose derivatives. Esters of 5-O-acetyl- or 5-azido-5-deoxy-3-(carboxymethyl)-D-ribofuranose were coupled with nucleobases to give branched-chain nucleoside derivatives. Ester saponification and protecting group manipulation provided 2'-O-(tert-butyldimethylsilyl) ethers of 5'-azido-5'-deoxy- or 5'-O-(dimethoxytrityl) derivatives of 3'-(carboxymethyl)-3'-deoxyribonucleosides that are effective precursors for synthesis of amide-linked oligoribonucleosides.     

Structure of the nitrogen-centered radical formed during inactivation of E. coli ribonucleotide reductase by 2'-azido-2'-deoxyuridine-5'-diphosphate: trapping of the 3'-ketonucleotide

Ribonucleotide reductases (RNRs) catalyze the conversion of nucleotides to deoxynucleotides providing the monomeric precursors required for DNA replication and repair. The class I RNRs are composed of two homodimeric subunits: R1 and R2. R1 has the active site where nucleotide reduction occurs, and R2 contains the diiron tyrosyl radical (Y*) cofactor essential for radical initiation on R1. Mechanism-based inhibitors, such as 2'-azido-2'-deoxyuridine-5'-diphosphate (N(3)UDP), have provided much insight into the reduction mechanism. N(3)UDP is a stoichiometric inactivator that, upon interaction with RNR, results in loss of the Y* in R2 and formation of a nitrogen-centered radical (N*) covalently attached to C225 (R-S-N*-X) in the active site of R1. N(2) is lost prior to N* formation, and after its formation, stoichiometric amounts of 2-methylene-3-furanone, pyrophosphate, and uracil are also generated. On the basis of the hyperfine interactions associated with N*, it was proposed that N* is also covalently attached to the nucleotide through either the oxygen of the 3'-OH (R-S-N*-O-R') or the 3'-C (R-S-N*-C-OH). To distinguish between the proposed structures, the inactivation was carried out with 3'-[(17)O]-N(3)UDP and N* was examined by 9 and 140 GHz EPR spectroscopy. Broadening of the N* signal was detected and the spectrum simulated to obtain the [(17)O] hyperfine tensor. DFT calculations were employed to determine which structures are in best agreement with the simulated hyperfine tensor and our previous ESEEM data. The results are most consistent with the R-S-N*-C-OH structure and provide evidence for the trapping of a 3'-ketonucleotide in the reduction process.     

Investigation of reactions postulated to occur during inhibition of ribonucleotide reductases by 2'-azido-2'-deoxynucleotides

Model 3'-azido-3'-deoxynucleosides with thiol or vicinal dithiol substituents at C2' or C5' were synthesized to study reactions postulated to occur during inhibition of ribonucleotide reductases by 2'-azido-2'-deoxynucleotides. Esterification of 5'-(tert-butyldiphenylsilyl)-3'-azido-3'-deoxyadenosine and 3'-azido-3'-deoxythymidine (AZT) with 2,3-S-isopropylidene-2,3-dimercaptopropanoic acid or N-Boc-S-trityl-L-cysteine and deprotection gave 3'-azido-3'-deoxy-2'-O-(2,3-dimercaptopropanoyl or cysteinyl)adenosine and the 3'-azido-3'-deoxy-5'-O-(2,3-dimercaptopropanoyl or cysteinyl)thymidine analogs. Density functional calculations predicted that intramolecular reactions between generated thiyl radicals and an azido group on such model compounds would be exothermic by 33.6-41.2 kcal/mol and have low energy barriers of 10.4-13.5 kcal/mol. Reduction of the azido group occurred to give 3'-amino-3'-deoxythymidine, which was postulated to occur with thiyl radicals generated by treatment of 3'-azido-3'-deoxy-5'-O-(2,3-dimercaptopropanoyl)thymidine with 2,2'-azobis-(2-methyl-2-propionamidine) dihydrochloride. Gamma radiolysis of N(2)O-saturated aqueous solutions of AZT and cysteine produced 3'-amino-3'-deoxythymidine and thymine most likely by both radical and ionic processes.     

Efficient synthesis of [2'-18O]uridine and its incorporation into oligonucleotides: a new tool for mechanistic study of nucleotidyl transfer reactions by isotope effect analysis

Lack of sufficient quantities of isotopically labeled materials has precluded the use of heavy atom isotope effects to investigate mechanisms of nucleotidyl transfer reactions in nucleic acids. Here we achieve regioselective opening of 2,2'-cyclouridine with [(18)O2]benzoic acid/potassium hydride, allowing an efficient "one-pot" synthesis of [2'-18O]uridine in 88% yield. Conversion to the corresponding phosphoramidite enables solid-phase synthesis of [2'-(18)O] RNA substrates for isotope effect studies with nucleotidyl transferases and hydrolases.     

Synthesis, Conformational Analysis, and Biological Evaluation of Heteroaromatic Taxanes

The asymmetric syntheses of heteroaromatic 3-[(tert-butyldimethylsilyl)oxy]-2-azetidinones 12-16 via chiral ester enolate-imine cyclocondensation chemistry are described. The azetidinones contain heteroaromatic moieties which, in certain cases, contribute to a decrease in enantioselectivity due to possible alternate coordinations in the transition states. The (3R,4S)-3-[(tert-butyldimethylsilyl)oxy]-4-heteroaryl-2-azetidinones were subsequently converted to the heteroaromatic taxanes 31-36 and 43-45. Conformational analyses of the 3'-(2-pyridyl) analogue 31 and 3'-(2-furyl) analogue 43 indicate they have solution conformational preferences virtually identical to paclitaxel and docetaxel. Heteroaromatic N-acyl paclitaxel analogues 47-51 were prepared from N-debenzoylpaclitaxel via Schotten-Baumann acylation. The majority of the 14 analogues displayed good to excellent activity in a microtubule assembly assay in comparison to paclitaxel. The analogues were also tested for cytotoxicity against B16 melanoma cells. 3'-Dephenyl-3'-(2-pyridyl)paclitaxel (31), 3'-dephenyl-3'-(2-furyl)paclitaxel (34), N-BOC-3'-dephenyl-3'-(2-furyl)paclitaxel (43), 3'-dephenyl-3'-(2-furyl)-N-(hexanoyl)paclitaxel (44), and N-debenzoyl-N-(3-furoyl)paclitaxel (51) were found to be more cytotoxic than paclitaxel against this cell line. 3'-Dephenyl-3'-(4-pyridyl)paclitaxel (33) and N-debenzoyl-N-(2-furoyl)paclitaxel (50) displayed cytotoxicity against B16 melanoma cells similar to paclitaxel.     

Diversity of new structural types in polynuclear iron chemistry with a tridentate N,N,O ligand

The syntheses, crystal structures, and magnetochemical characterization of four new iron clusters [Fe7O4(O2CPh)11(dmem)2] (1), [Fe7O4(O2CMe)11(dmem)2] (2), [Fe6O2(OH)4(O2CBut)8(dmem)2] (3), and [Fe3O(O2CBut)2(N3)3(dmem)2] (4) (dmemH=Me2NCH2CH2N(Me)CH2CH2OH)=2-{[2-(dimethylamino)ethyl]methylamino}ethanol) are reported. The reaction of dmemH with [Fe3O(O2CR)6(H2O)3](NO3) (R=Ph (1), Me (2), and But (3)) gave 1, 2, and 3, respectively, whereas 4 was obtained from the reaction of 3 with sodium azide. The complexes all possess rare or novel core topologies. The core of 1 comprises two [Fe4(mu3-O)2]8+ butterfly units sharing a common body Fe atom. The core of 2 consists of a [Fe3O3] ring with each doubly bridging O2- ion becoming mu3 by also bridging to a third, external Fe atom; a seventh Fe atom is attached on the outside of this core via an additional mu3-O2- ion. The core of 3 consists of a [Fe4(mu3-O)2]8+ butterfly unit with an Fe atom attached above and below this by bridging O atoms. Finally, the core of 4 is an isosceles triangle bridged by a mu3-O2- ion with a rare T-shaped geometry and with the azide groups all bound terminally. Variable-temperature, solid-state dc, and ac magnetization studies were carried out on complexes 1-4 in the 5.0-300 K range. Fitting of the obtained magnetization (M) vs field (H) and temperature (T) data by matrix diagonalization and including only axial anisotropy (zero-field splitting) established that 1, 2, and 4 each possess an S=5/2 ground state spin, whereas 3 has an S=5 ground state. As is usually the case, good fits of the magnetization data could be obtained with both positive and negative D values. To obtain more accurate values and to determine the sign of D, high-frequency EPR studies were carried out on single crystals of representative complexes 1.4MeCN and 3.2MeCN, and these gave D=+0.62 cm-1 and |E|>or=0.067 cm-1 for 1.4MeCN and D=-0.25 cm-1 for 3.2MeCN. The magnetic susceptibility data for 4 were fit to the theoretical chiM vs T expression derived by the use of an isotropic Heisenberg spin Hamiltonian and the Van Vleck equation, and this revealed the pairwise exchange parameters to be antiferromagnetic with values of Ja=-3.6 cm-1 and Jb=-45.9 cm-1. The combined results demonstrate the ligating flexibility of dmem and its usefulness in the synthesis of a variety of Fex molecular species.     

Synthesis and reactivity of the methoxozirconium pentatungstate (nBu4N)6[{(mu-MeO)ZrW5O18}2]: insights into proton-transfer reactions, solution dynamics, and assembly of {ZrW5O18}2- building blocks

The methoxo-bridged, dimeric, ZrIV-substituted Lindqvist-type polyoxometalate (POM) (nBu4N)6[{(mu-MeO)ZrW5O18}2], (TBA)61, has been synthesized by stoichiometric hydrolysis of Zr(OnPr)4, [{Zr(OiPr)3(mu-OnPr)(iPrOH)}2], or [{Zr(OiPr)4(iPrOH)}2] and [{WO(OMe)4}2] in the presence of (nBu4N)2WO4, providing access to the systematic nonaqueous chemistry of ZrW5 POMs for the first time and an efficient route to 17O-enriched samples for 17O NMR studies. 1H NMR provided no evidence for dissociation of 1 in solution, although exchange with MeOH was shown to be slow by an EXSY study. Reactions with HX at elevated temperatures gave a range of anions [{XZrW5O18}n]3n- (X = OH, 3; OPh, 4; OC6H4Me-4, 5; OC6H4(CHO)-2, 6; acac, 7; OAc, 8), where n = 2 for 3 and n = 1 for 4-8, while 1H and 17O NMR studies of hydrolysis of 1 revealed the formation of an intermediate [(mu-MeO)(mu-HO)(ZrW5O18)2]6-. Electrospray ionization mass spectrometry of 1 and 3 illustrated the robust nature of the ZrW5O18 framework, and X-ray crystal structure determinations showed that steric interactions between ligands X and the ZrW5O18 surface are important. The coordination number of Zr is restricted to six in aryloxides 4 and 5, while seven-coordination is achieved in the chelate complexes 6-8. Given the inert nature of the methoxo bridges in 1, protonation of ZrOW sites is proposed as a possible step in reactions with HX. The diphenylphosphinate ligand in [(Ph2PO2)ZrW5O18]3- was found to be labile and upon attempted recrystallization the aggregate [(mu3-HO)2(ZrW5O18)3H]7- 9 was formed, which was found to be protonated at ZrOZr and ZrOW sites. This work demonstrates the flexibility of the {ZrW5O18}2- core as a molecular platform for modeling catalysis by tungstated zirconia surfaces.     

Preparation, properties, and reactivities of unprecedented oxo-sulfido Nb(IV) aqua ions and crystal structure of (Me2NH2)6[Nb5(mu3-S)2(mu3-O)2(mu2-O)2(NCS)14].3.5H2O

By treatment of Zn-reduced ethanolic solutions of NbCl5 with HCl in the presence of sulfide followed by cation-exchange chromatography, two oxo-sulfido niobium aqua ions, the red [Nb4(mu4-S)(mu2-O)5(H2O)10]4+ and the yellow-brown [Nb5(mu3-S)2(mu3-O)2(mu2-O)2(H2O)14]8+, were isolated. Both readily form their respective thiocyanate complexes, for which the structure for the former has been previously reported. Brown crystals of (Me2NH2)6[Nb5S2O4(NCS)14].3.5H2O (1) were isolated in the case of the latter, and the structure was determined by X-ray crystallography (space group: a = 15.4018(5) A, b = 21.1932(8) A, c = 22.0487(8) A, alpha=gamma = 90 degrees , beta = 103.4590(10) degrees , and R(1) = 0.0659). An unprecedented pentanuclear Nb5S2O48+ core is revealed in which short Nb-Nb distances (2.7995(8)-2.9111(8) A) are consistent with metal-metal bonding. A stopped-flow kinetic study of the 1:1 equilibration of NCS- with [Nb4(mu4-S)(mu2-O)5(H2O)10]4+ has been carried out. Equilibration rate constants are independent of [H(+)] in the range investigated (0.5-2.0 M) and at 25 degrees C; kf= 9.5 M(-1) s(-1), kaq = 2.6 x 10(-2) s(-1), and K = 365 M1). Conditions with first NCS- and then [Nb4(mu4-S)(mu2-O)5(H2O)10]4+ in excess revealed a statistical factor of 4, suggesting the presence of four kinetically equivalent Nb atoms. Attempts to study the 1:1 substitution of NCS- with [Nb5(mu3-S)2(mu3-O)2(mu2-O)2(H2O)14]8+ showed signs of saturation kinetics. Quantum chemical calculations using the density functional theory (DFT) approach were performed on both the Nb4O5S4+ and Nb5O4S28+ naked clusters. The highest occupied and lowest unoccupied molecular orbitals have dominant Nb(4d) character. The HOMO for Nb4O5S4+ is a nondegenerate fully filled MO, whereas for Nb5O4S28+, it is a nondegenerate partially filled MO with one unpaired electron. EPR spectroscopy on [Nb5(mu3-S)2(mu3-O)2(mu2-O)2(H2O)14]8+ shows that the molecule has total anisotropy (C2v), with all three tensors, gx= 2.399, gy= 1.975, and gz= 1.531, resolved. No hyperfine interaction expected from the nuclear moment of I = 9/2 for 93Nb was observed.     

Synthesis of novel acyclonucleosides. Reactions of 1-(1-bromo or 3-bromo-2-oxopropyl)pyridazin-6-ones

Reaction of 1-(3-bromo-2-oxopropyl)pyridazin-6-ones 1 and 2 with sodium azide at room temperature gave the corresponding 1-(3-azido-2-oxopropyl)pyridazin-6-ones 3 and 4 , whereas reaction of 1-(1-bromo-2-oxo-propyl)pyridazin-6-ones 5 and 6 with excess sodium azide afforded 4-azido-5-chloropyridazin-6-one 7 and 4,5-diazido-3-nitropyridazin-6-one 8 by dealkylation. Some 1-(2-hydroxypropyl)pyridazin-6-ones 9, 10, 11 were synthesized from the corresponding 1-(2-oxopropyl) derivatives 1, 2, 3 . 4,5-Dichloro-1-(2,3-dihydroxypropyl)-pyridazin-6-one 13 was also prepared from compound 9 via the corresponding 2,3-epoxypropyl derivative 12 . Treatment of compound 5 with thiourea gave 4,5-dichloro-1-(2-amino-4-methylthiazol-5-yl)pyridazin-6-one 14 . Reaction of compounds 1 and 2 with thiourea at 20° afforded the corresponding 3-formamidinylthio-2-oxo-propyl derivatives 15 and 16 , whereas treatment of compound 1 with thiourea at 45° gave 4,5-dichloro-1-[(2-aminothiazol-5-yl)methyl]pyridazin-6-one 17 . Compound 17 was also prepared from compound 15 by refluxing in ethanol.     

Synthesis and catalysis of di- and tetranuclear metal sandwich-type silicotungstates [(gamma-SiW10O36)2M2(mu-OH)2]10- and [(gamma-SiW10O36)2M4(mu4-O)(mu-OH)6]8- (M = Zr or Hf)

The di- and tetranuclear metal sandwich-type silicotungstates of Cs10[(gamma-SiW10O36)2{Zr(H2O)}2(mu-OH)2] x 18 H2O (Zr2, monoclinic, C2/c (No. 15), a = 25.3315(8) A, b = 22.6699(7) A, c = 18.5533(6) A, beta = 123.9000(12) degrees, V = 8843.3(5) A(3), Z = 4), Cs10[(gamma-SiW10O36)2{Hf(H2O)}2(mu-OH)2] x 17 H2O (Hf2, monoclinic, space group C2/c (No. 15), a = 25.3847(16) A, b = 22.6121(14) A, c = 18.8703(11) A, beta = 124.046(3) degrees, V = 8974.9(9) A(3), Z = 4), Cs8[(gamma-SiW10O36)2{Zr(H2O)}4(mu4-O)(mu-OH)6] x 26 H2O (Zr4, tetragonal, P4(1)2(1)2 (No. 92), a = 12.67370(10) A, c = 61.6213(8) A, V = 9897.78(17) A(3), Z = 4), and Cs8[(gamma-SiW10O36)2{Hf(H2O)}4(mu4-O)(mu-OH)6] x 23 H2O (Hf4, tetragonal, P4(1)2(1)2 (No. 92), a = 12.68130(10) A, c = 61.5483(9) A, V = 9897.91(18) A(3), Z = 4) were obtained as single crystals suitable for X-ray crystallographic analyses by the reaction of a dilacunary gamma-Keggin silicotungstate K8[gamma-SiW10O36] with ZrOCl2 x 8 H2O or HfOCl2 x 8 H2O. These dimeric polyoxometalates consisted of two [gamma-SiW10O36](8-) units sandwiching metal-oxygen clusters such as [M2(mu-OH)2](6+) and [M4(mu4-O)(mu-OH)6](8+) (M = Zr or Hf). The dinuclear zirconium and hafnium complexes Zr2 and Hf2 were isostructural. The equatorially placed two metal atoms in Zr2 and Hf2 were linked by two mu-OH ligands and each metal was bound to four oxygen atoms of two [gamma-SiW10O36](8-) units. The tertanuclear zirconium and hafnium complexes Zr4 and Hf4 were isostructural and consisted of the adamantanoid cages with a tetracoordinated oxygen atom in the middle, [M4(mu4-O)(mu-OH)6](8+) (M = Zr or Hf). Each metal atom in Zr4 and Hf4 was linked by three mu-OH ligands and bound to two oxygen atoms of the [gamma-SiW10O36](8-) unit. The tetra-nuclear zirconium and hafnium complexes showed catalytic activity for the intramolecular cyclization of (+)-citronellal to isopulegols without formation of byproducts resulting from etherification and dehydration. A lacunary silicotungstate [gamma-SiW10O34(H2O)2](4-) was inactive, and the isomer ratio of isopulegols in the presence of MOCl2 x 8 H2O (M = Zr or Hf) were much different from that in the presence of tetranuclear complexes, suggesting that the [M4(mu4-O)(mu-OH)6](8+) core incorporated into the POM frameworks acts as an active site for the present cyclization. On the other hand, the reaction hardly proceeded in the presence of dinuclear zirconium and hafnium complexes under the same conditions. The much less activity is possibly explained by the steric repulsion from the POM frameworks in the dinuclear complexes.     

一个二核钒配合物的合成及晶体结构：NH4[(VⅣO)2(μ2-O)(nta)2][EuⅢ(H2O)9](英)

A binuclear vanadium complex NH₄[(V^ⅣO)₂(μ₂-O)(nta)₂][Eu^Ⅲ(H₂O)₉] was synthesized by reaction of NH₃VO₃, nitrilotriacetic acid and EuCl₃ in one aqueous solution. The crystal X-ray analysis shows that the complex contains one binuclear vanadium anion [(V^ⅣO)₂(μ₂-O)(nta)2]^4- and one [Eu^Ⅲ(H₂O)₉]³⁺ cation. The molecules are built up to a three-dimensional supramolecular structure through hydrogen bonding. CCDC: 238716.     

Water exchange rates in the diruthenium mu-oxo ion cis,cis-[(bpy)(2)Ru(OH(2))](2)O(4+).

Addition of 2 equiv of Ce(4+) to the dimeric ruthenium mu-oxo ion cis,cis-[(bpy)(2)Ru(OH(2))](2)O(4+) (formal oxidation state III-III, subsequently denoted [3,3]) or addition of 1 equiv of Ce(4+) to the corresponding [3,4] ion gave near-quantitative conversion to the [4,4] ion, confirming our recent assignment of this oxidation state as an accumulating intermediate during water oxidation by the cis,cis-[(bpy)(2)Ru(O)](2)O(4+) ([5,5]) ion. The rates of water exchange at the cis-aqua positions in the [3,3] and [3,4] ions were investigated by incubating H(2)(18)O-enriched samples in normal water for predetermined times, then oxidizing them to the [5,5] state and measuring by resonance Raman (RR) spectroscopy changes in the magnitudes of the O-isotope sensitive bands at 780 and 818 cm(-1). These bands have been assigned to Ru=(18)O and Ru=(16)O stretching modes, respectively, for ruthenyl bonds formed by deprotonation of the aqua ligands upon oxidation to the [5,5] state. An intermediate accumulated during the course of the isotope exchange reaction that gave a [5,5] ion possessing both approximately 782 and approximately 812 cm(-1) bands; this spectrum was assigned to the mixed-isotope species, (bpy)(2)Ru((16)O)(16)ORu((18)O)(bpy)(2)(4+). Kinetic analysis of solutions at various levels of oxidation indicated that only the [3,3] ion underwent substitution; the exchange rate constant obtained in 0.5 M trifluoromethanesulfonic acid, 23 degrees C, was 7 x 10(-3) s(-1), which is (10(3)-10(5))-fold larger than rate constants measured for anation of monomeric (bpy)(2)Ru(III)X(H(2)O)(3+) ions bearing simple sigma-donor ligands (X).     

Mixed-valent [FeIV(mu-O)(mu-carboxylato)2FeIII]3+ core

The symmetrically ligated complexes 1, 2, and 3 with a (mu-oxo)bis(mu-acetato)diferric core can be one-electron oxidized electrochemically or chemically with aminyl radical cations [*NR3][SbCl6] in acetonitrile yielding complexes which contain the mixed-valent [(mu-oxo)bis(mu-acetato)iron(IV)iron(III)]3+ core: [([9]aneN3)(2FeIII2)(mu-O)(mu-CH3CO2)2](ClO4)2 (1(ClO4)2), [(Me3[9]aneN3)(2FeIII2)(mu-O)(mu-CH3CO2)2](PF6)2 (2(PF6)(2)), and [(tpb)(2FeIII2)(mu-O)(mu-CH3CO2)2] (3) where ([9]aneN3) is the neutral triamine 1,4,7-triazacyclononane and (Me3[9]aneN3) is its tris-N-methylated derivative, and (tpb)(-) is the monoanion trispyrazolylborate. The asymmetrically ligated complex [(Me3[9]aneN3)FeIII(mu-O)(mu-CH3CO2)2FeIII(tpb)](PF6) (4(PF6)) and its one-electron oxidized form [4ox]2+ have also been prepared. Finally, the known heterodinuclear species [(Me3[9]aneN3)CrIII(mu-O)(mu-CH3CO2)2Fe([9]aneN3)](PF6)2 (5(PF6)(2)) can also be one-electron oxidized yielding [5ox]3+ containing an iron(IV) ion. The structure of 4(PF6).0.5CH3CN.0.25(C2H5)2O has been determined by X-ray crystallography and that of [5ox]2+ by Fe K-edge EXAFS-spectroscopy (Fe(IV)-O(oxo): 1.69(1) A; Fe(IV)-O(carboxylato) 1.93(3) A, Fe(IV)-N 2.00(2) A) contrasting the data for 5 (Fe(III)-O(oxo) 1.80 A; Fe(III)-O(carboxylato) 2.05 A, Fe-N 2.20 A). [5ox]2+ has an St = 1/2 ground state whereas all complexes containing the mixed-valent [FeIV(mu-O)(mu-CH3CO2)2FeIII]3+ core have an St = 3/2 ground state. M?ssbauer spectra of the oxidized forms of complexes clearly show the presence of low spin FeIV ions (isomer shift approximately 0.02 mm s(-1), quadrupole splitting approximately 1.4 mm s(-1) at 80 K), whereas the high spin FeIII ion exhibits delta approximately 0.46 mm s(-1) and DeltaE(Q) approximately 0.5 mm s(-1). M?ssbauer, EPR spectral and structural parameters have been calculated by density functional theoretical methods at the BP86 and B3LYP levels. The exchange coupling constant, J, for diiron complexes with the mixed-valent FeIV-FeIII core (H = -2J S1.S2; S(1) = 5/2; S2 = 1) has been calculated to be -88 cm(-1) (intramolecular antiferromagnetic coupling) and for the reduced diferric form of -75 cm(-1) in reasonable agreement with experiment (J = -120 cm(-1)).     

Acid/azole complexes as highly effective promoters in the synthesis of DNA and RNA oligomers via the phosphoramidite method

The utility of various kinds of acid salts of azole derivatives as promoters for the condensation of a nucleoside phosphoramidite and a nucleoside is investigated. Among the salts, N-(phenyl)imidazolium triflate, N-(p-acetylphenyl)imidazolium triflate, N-(methyl)benzimidazolium triflate, benzimidazolium triflate, and N-(phenyl)imidazolium perchlorate have shown extremely high reactivity in a liquid phase. These reagents serve as powerful activators of deoxyribonucleoside 3'-(allyl N,N-diisopropylphosphoramidite)s or 3'-(2-cyanoethyl N,N-diisopropylphosphoramidite)s employed in the preparation of deoxyribonucleotides, and 3'-O-(tert-butyldimethylsilyl)ribonucleoside 2'-(N,N-diisopropylphosphoramidite)s or 2'-O-(tert-butyldimethylsilyl)ribonucleoside 3'-(N,N-diisopropylphosphoramidite)s used for the formation of 2'-5' and 3'-5' internucleotide linkages between ribonucleosides, respectively. The azolium salt has allowed smooth and high-yield condensation of the nucleoside phosphoramidite and a 5'-O-free nucleoside, in which equimolar amounts of the reactants and the promoter are employed in the presence of powdery molecular sieves 3A in acetonitrile. It has been shown that some azolium salts serve as excellent promoters in the solid-phase synthesis of oligodeoxyribonucleotides and oligoribonucleotides. For example, benzimidazolium triflate and N-(phenyl)imidazolium triflate can be used as effective promoters in the synthesis of an oligodeoxyribonucleotide, (5')CGACACCCAATTCTGAAAAT(3') (20mer), via a method using O-allyl/N-allyloxycarbonyl-protected deoxyribonucleoside 3'-phosphoramidites or O-(2-cyanoethyl)/N-phenoxyacetyl-protected deoxyribonucleotide 3'-phosphoramidite as building blocks, respectively, on high-cross-linked polystyrene resins. Further, N-(phenyl)imidazolium triflate is useful for the solid-phase synthesis of oligoribonucleotides, such as (5')AGCUACGUGACUACUACUUU(3') (20mer), according to an allyl/allyloxycarbonyl-protected strategy. The utility of the azolium promoter has been also demonstrated in the liquid-phase synthesis of some biologically important substances, such as cytidine-5'-monophosphono-N-acetylneuraminic acid (CMP-Neu5Ac) and adenylyl(2'-5')adenylyl(2'-5')adenosine (2-5A core).     

Nucleophilic reactivity and oxo/sulfido substitution reactions of MVIO3 Groups (M = Mo, W)

The nucleophilic reactivity of oxo ligands in the groups M(VI)O(3) in the trigonal complexes [(Me(3)tacn)MO(3)] (M = Mo (1), W (10)) and [(Bu(t)(3)tach)MO(3)] (M = Mo (5), W (14)) has been investigated. Complexes 1/10 can be alkylated with MeOTf to give [(Me(3)tacn)MO(2)(OMe)](1+) (2/11), silylated with Pr(i)(3)SiOTf to form [(Me(3)tacn)MO(2)(OSiPr(i)(3))](+) (3/12), and protonated with HOTf to yield [(Me(3)tacn)MoO(2)(OH)](+) (4). Similarly, complexes 5/14 can be silylated to [(Bu(t)(3)tach)MO(2)(OSiPr(i)(3))](+) (6/15) and protonated to [(Bu(t)(3)tach)MO(2)(OH)](+) (7/16). Products were isolated as triflate salts in yields exceeding 70%. When excess acid was used, the dinuclear mu-oxo species [(Bu(t)(3)tach)(2)M(2)O(5)](2+) (8/17) were obtained. X-ray structures are reported for 2-4, 6-8, 12, and 15-17. All mononuclear complexes have dominant trigonal symmetry with a rhombic distortion owing to a M[bond]OR bond (R = Me, SiPr(i)(3), H), which is longer than M[double bond]O oxo interactions; the latter exert a substantial trans influence on M[bond]N bond lengths. Oxo ligands in 5/14 undergo replacement with sulfide. Lawesson's reagent effects formation of [(Bu(t)(3)tach)MS(3)] (9/18), 14 with excess B(2)S(3) yields incompletely substituted [(Bu(t)(3)tach)WOS(2)] (20), and 5 with excess B(2)S(3) yields [(Bu(t)(3)tach)Mo(IV)O(S(4))] (19). The structures of 9, 19, and 20 are reported. Precedents for M(VI)S(3) groups in five- and six-coordinate molecules are limited. This investigation is the first detailed study of the behavior of M(VI)O(3) groups in nucleophilic and oxo/sulfido substitution reactions and should be useful in synthetic approaches to the active sites of the xanthine oxidase enzyme family and of certain tungstoenzymes. (Bu(t)(3)tach = 1,3,5-tri-tert-butyl-1,3,5-triazacyclohexane, Me(3)tacn = 1,4,7-trimethyl-1,4,7-triazacyclonane; OTf = triflate).     

Protonolysis of [((i)PrO)TiMo5O18]3-: access to a family of TiMo5 Lindqvist type polyoxometalates

The tetra-n-butylammonium (TBA) salts of [((i)PrO)TiMo(5)O(18)](3-) 1 and [((i)BuO)TiMo(5)O(18)](3-) 2 were prepared by hydrolysis of mixtures of (TBA)(2)[Mo(2)O(7)], (TBA)(4)α-[Mo(8)O(26)] and Ti(OR)(4) (R = (i)Pr or (i)Bu) in acetonitrile. Treatment of (TBA)(3)1 with alcohols ROH afforded primary and tertiary alkoxide derivatives [(RO)TiMo(5)O(18)](3-) (R = Me 3, (t)Bu 4), whilst aryloxides [(ArO)TiMo(5)O(18)](3-) were prepared by reacting 1 with phenols ArOH (Ar = C(6)H(4)Me-4 5, and C(6)H(4)CHO-2 6). Oxo-bridged [(μ-O)(TiMo(5)O(18))(2)](6-)7 rather than the hydroxo derivative [(HO)TiMo(5)O(18)](3-) was obtained upon hydrolysis of 1. X-Ray crystal structures of TBA salts of anions 3-7 show that titanium is six-coordinate in all cases, although titanium sites are disordered over two trans positions in 3. Mo-O bond length alternation is observed in the Mo(4)O(4) planes of 4 and 7 and in one of the two independent anions in the structure of 3. In solution, (17)O NMR spectra are consistent with the higher anionic charge compared to [Mo(6)O(19)](2-) and reveal an order of basicity for the anions [LM'Mo(5)O(18)](3-) associated with the ability of {LM'}(3+) to donate/withdraw electron density from {Mo(5)O(18)}(6-). Protonolysis reactions of 1 and 3 were slower than for tungstate analogues and the possibility of initial protonation at TiOM (M = Mo) rather than TiOR (M = W) in a proton-assisted S(N)1 mechanism for ligand exchange in [(RO)TiM(5)O(18)](3-) is discussed.     

Studies on the Thioglycosides of N-Acetylneuraminic Acid 7: Synthesis of S-(α-Sialyl)-(2↠6)-β-D-Hexopyranosyl and -(2↠6)-β-D-Lactosyl Ceramides and their Biological Activity

ABSTRACT

The coupling of the sodium salt of methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3, 5-dideoxy-2-thio-D-glycero-α-D-galacto-2-nonulopyranosonate (17) with 2-(trimethylsilyl)ethyl 2,3,4-tri-O-acetyl-6-bromo-6-deoxy-β-D-galactopyranoside (5), glucopyranoside (10), and 2-(trimethylsilyl)ethyl 2,3,6,2′,3′,4′-hexa-O-acetyl-6′-bromo-6′-deoxy-β-D-lactoside (16), gave the corresponding α-thioglycosides 18, 21, and 24 of the 2-thio-N-acetyl-neuraminic acid derivative in good yields, which were converted, via selective removal of the 2-(trimethylsilyl)ethyl group, trichloroacetimidation, and coupling with (2S,3R,4E)-2-azido-3-O-benzoyl-4-octadecene-1,3-diol (27), into the ß-glycosides 28, 32, and 36, respectively.

Compounds 28, 32, and 36 were transformed, via selective reduction of the azide group, coupling with octadecanoic acid, O-deacetylation, and de-esterification, into the title compounds 31, 35, and 39, which showed potent inhibitory effect for sialidases from influenza and other viruses.     

Mn12O12(OMe)2(O2CPh)16(H2O)2]2- single-molecule magnets and other manganese compounds from a reductive aggregation procedure

A new synthetic procedure has been developed in Mn cluster chemistry involving reductive aggregation of permanganate (MnO4-) ions in MeOH in the presence of benzoic acid, and the first products from its use are described. The reductive aggregation of NBu(n)4MnO4 in MeOH/benzoic acid gave the new 4Mn(IV), 8Mn(III) anion [Mn12O12(OMe)2(O2CPh)16(H2O)2]2-, which was isolated as a mixture of two crystal forms (NBu(n)4)2[Mn12O12(OMe)2(O2CPh)16(H2O)2].2H2O.4CH2Cl2 (1a) and (NBu(n)4)2[Mn12O12(OMe)2(O2CPh)16(H2O)2].2H2O.CH2Cl2 (1b). The anion of 1 contains a central [Mn(IV)4(mu3-O)2(mu-O)2(mu-OMe)2]6+ unit surrounded by a nonplanar ring of eight Mn(III) atoms that are connected to the central Mn4 unit by eight bridging mu3-O2- ions. This compound is very similar to the well-known [Mn12O12(O2CR)16(H2O)4] complexes (hereafter called "normal Mn12"), with the main difference being the structure of the central cores. Longer reaction times (approximately 2 weeks) led to isolation of polymeric [Mn(OMe)(O2CPh)2]n2, which contains a linear chain of repeating [Mn(III)(mu-O2CPh)2(mu-OMe)Mn(III)] units. The chains are parallel to each other and interact weakly through pi-stacking between the benzoate rings. When KMnO4 was used instead of NBu(n)4MnO4, two types of compounds were obtained, [Mn12O12(O2CPh)16(H2O)4] (3), a normal Mn12 complex, and [Mn4O2(O2CPh)8(MeOH)4].2MeOH (4.2MeOH), a new member of the Mn4 butterfly family. The cyclic voltammogram of 1 exhibits three irreversible processes, two reductions and one oxidation. One-electron reduction of 1 by treatment with 1 equiv of I- in CH2Cl2 gave (NBu(n)4[Mn12O12(O2CPh)16(H2O)3].6CH2Cl2 (5.6CH2Cl2), a normal Mn12 complex in a one-electron reduced state. The variable-temperature magnetic properties of 1, 2, and 5 were studied by both direct current (dc) and alternating current (ac) magnetic susceptibility measurements. Variable-temperature dc magnetic susceptibility studies revealed that (i) complex 1 possesses an S = 6 ground state, (ii) complex 2 contains antiferromagnetically coupled chains, and (iii) complex 5 is a typical [Mn12]- cluster with an S = 19/2 ground state. Variable-temperature ac susceptibility measurements suggested that 5 and both isomeric forms of 1 (1a,b) are single-molecule magnets (SMMs). This was confirmed by the observation of hysteresis loops in magnetization vs dc field scans. In addition, 1a,b, like normal Mn12 clusters, display both faster and slower relaxing magnetization dynamics that are assigned to the presence of Jahn-Teller isomerism.     

Na_3H_2[PMo_(10)V_2O_(40)]·16H_2O的合成与晶体结构

标题化合物的晶体属P2_1/m空间群,α=13.821(2),b=15.355(3),c=11.597(2),β=107.50(2)°,V=2347.2~3,M_r=2091.46,Z=2,D_c=2.959 g·cm~(-3),μ(MoK_o)=30.77cm~(-1),F(000)=1992。用4049个独立可观测衍射精修结构,R=0.033。杂多酸阴离子[PMo_(10)V_2O_(40)]~(5-)具有准Keggin结构,12个金属原子呈无序分布,中心原子P与两个齿顶原子M(Mo/V)在对称面上。P—O平均键长1.541(2),M—O键长1.671(2)-2.432(2)。除一个Na—O配位多面体为畸变三方锥外,其余四个Na—O配位体均为六配位。讨论了Na~+离子呈无序分布的晶体结构特征并初步总结[PMo_(10)V_2O_(40)]~(5-)在不同晶相中的构型。     

Solvent- and temperature-controlled in situ ligand reactions mediated by Cu(II) and 3'-[(E)-{[(1S,2S)-2-aminocyclohexyl]imino}methyl]-4'-hydroxy-4-biphenylcarboxlic acid

Three new compounds, CuL, CuL', and Cu(2)O(2)L'(2) (H(2)L = 3'-[(E)-{[(1S,2S)-2-aminocyclohexyl]imino}methyl]-4'-hydroxy-4-biphenylcarboxlic acid, H(2)L' = 3'-[(E)-{[(1S,2S)-2-aminocyclohexyl]imino}methyl]-4'-hydroxy-5'-nitro-4-biphenylcarboxlic acid, H(2)L' = 3'-(N,N-dimethylamino methyl)-4'-hydroxy-4-biphenylcarboxlic acid), were selectively synthesized through a controlled in situ ligand reaction system mediated by copper(II) nitrate and H(2)L. Selective nitration was achieved by using different solvent mixtures under relatively mild conditions, and an interesting and economical reductive amination system in DMF/EtOH/H(2) O was also found. All crystal structures were determined by single-crystal X-ray diffraction analysis. Both CuL and CuL' display chiral 1D chain structures, whereas Cu(2)O(2)L'(2) possesses a structure with 13×16?? channels and a free volume of 41.4?%. The possible mechanisms involved in this in situ ligand-controlled reaction system are discussed in detail.