Spectroscopic studies on methyl torsional behavior in 1-methyl-2(1H)-pyridone, 1-methyl-2(1H)-pyridinimine, and 3-methyl-2(1H)-pyridone. I. Excited state

The laser induced fluorescence excitation and dispersed fluorescence spectra of three nitrogen heterocyclic molecules 1-methyl-2(1H)pyridone (1MPY), 1-methyl-2(1H)pyridinimine (1MPI), and 3-methyl-2(1H)pyridone (3MPY) have been studied under supersonic jet cooled condition. The methyl torsional and some low frequency vibrational transitions in the fluorescence excitation spectrum were assigned for 1MPY. These new assignments modify the potential parameters to the methyl torsion reported earlier. Some striking similarities exist between the torsional and vibrational transitions in the fluorescence excitation spectra of 1MPY and 1MPI. Apart from pure torsional transitions, a progression of vibration-torsion combination bands was observed for both these molecules. The excitation spectrum of 3MPY resembles the spectrum of its parent molecule, 2-pyridone. The barrier height of the methyl torsion in the excited state of 3MPY is highest amongst all these molecules, whereas the barrier in 1MPI is higher than that of 1MPY. To get an insight into the methyl torsional barrier for these molecules, results of the ab initio calculations were compared with the experimental results. It was found that the conformation of the methyl group undergoes a 60 degrees rotation in the excited state in all these molecules with respect to their ground state conformation. This phase shift of the excited state potential is attributed to the pi*-sigma* hyperconjugation between the out-of-plane hydrogen of the methyl group and the molecular frame. It has been inferred that the change in lowest unoccupied molecular orbital energy plays the dominant role in the excited state barrier formation.     

磺化双酞菁钴自组装膜结构的表面增强拉曼光谱

采用自组装的方法构建了双核磺化酞菁钴轴向配位有序排列的膜层结构. 结合双核磺化酞菁钴分子体系自身所具有的性质及其和桥联分子四巯基吡啶之间相互作用的信息, 对其自组装膜的表面增强拉曼光谱进行了分析, 探讨了其自组装行为, 合理地解释了本自组装体系的膜层结构. 研究结果表明, 双核磺化酞菁钴分子(Bi-CoPc)在这种自组装膜中是以与基底平面存在一定夹角的倾斜的方式排列的.     

密度泛函理论研究银上吸附对巯基吡啶的SERS化学增强效应

基于密度泛函理论计算和拉曼光谱理论分析,我们研究了对巯基吡啶(4MPY)分子的拉曼光谱和其在银上的表面增强拉曼光谱(SERS),并进一步探讨了SERS与界面吸附结构、异构化、质子化和氢键作用以及低能激发态的关系。首先,我们对两种分子异构体的相对稳定性和拉曼光谱进行了理论分析。在此基础上,进而研究了该分子与不同银簇作用时的拉曼光谱,结果表明,4MPY以巯基硫与银簇作用形成强的Ag―S键,导致拉曼光谱的线型不依赖于所选银簇的大小。接着我们考虑了吡啶氮端作用的两种情况。(1)当4MPY-银簇复合物同时以吡啶氮与水簇或水合质子簇形成氢键时,结果表明吡啶环的部分振动频率随氢键和质子化发生蓝移。(2)当考虑吡啶氮与银簇作用时,吡啶环三角畸变振动发生蓝移。上述情况不仅解释了实验观测的振动频率变化,而且表明了化学环境改变对相对拉曼强度的影响。最后,我们计算了当对巯基吡啶分子以单端或双端与银簇作用,在考虑激发光与低能激发态的能量匹配时,拉曼光谱强度与低能激发态的关系。计算结果表明,在双端吸附构型下,与吡啶氮成键的银簇受激发产生电荷转移态,不仅导致吡啶环v_(12)、v_1和v_(8a)振动的拉曼信号增强,而且选择性地增强吡啶环C―H面内对称弯曲振动v9a的拉曼信号。     

Infrared spectrum and structural assignment of the water trimer anion

The bending vibrational spectrum of the perdeutero isotopomer of the water trimer anion has been measured and compared with spectra calculated using the MP2, CCSD, and Becke3LYP electronic structure methods. Due to its low electron binding energy (approximately 150 meV), only the OD bending region of the IR spectrum of (D2O)3(-) is accessible experimentally, with electron ejection dominating at higher photon energies. The calculated spectrum of the isomer having three water molecules arranged in a chain agrees best with the experimental spectrum. In the chain isomer, the excess electron is bound to the terminal water monomer with two dangling OH groups. This is consistent with the electron binding mechanism established previously for the (H2O)n(-) (n = 2, 4-6) anions.     

Energetics of low-molecular-mass products of mechanical fracture of poly(methyl methacrylate)

It is experimentally revealed that monomer and water molecules released during the fracture of PMMA have a bimodal velocity distribution. The first distribution peak for the monomer corresponds to energetic (hot) MMA molecules (0.13–0.70 eV), and the second peak is attributed to MMA molecules bearing a low energy (0.016–0.060 eV). On the basis of the results of earlier theoretical studies of the mechanically induced polymer-chain scission, it was concluded that the energetic monomer molecules are produced immediately in the event of mechanical chain rupture and are nonthermal in nature. In the bimodal velocity distribution of occluded water molecules desorbed from a subsonic crack, the first and the second peaks are attributed to “hot” and “cold” molecules with translational temperatures of 605 ± 180 K and 53 ± 5 K, respectively. A possible mechanism of the mechanically induced desorption of occluded water is discussed. The mechanodesorption of water molecules is due to the portion of vibrational energy transferred to side methyl carboxylate groups that retain water molecules by the unloading-wave front traveling along the main chain from a macromolecule scission site. Along with hot water molecules, a considerable amount of hot free hydroxyls were detected. The mechanism of formation of the latter species is associated with the double-well structure of the hydrogen bond potential and similar to the mechanism of mechanodesorption of hot molecules of water.     

Hydrogen-bonding interactions in acetic acid monohydrates and dihydrates by density-functional theory calculations

Equilibrium structures and the respective binding energies of acetic acid monohydrates and dihydrates have been determined by density-functional theory calculations with different basis sets, including 6-31+G(3d,p), 6-311++G(d,p), and 6-311++G(3df,3pd). Given that the C=O and OH groups in acetic acid provide the predominant hydrogen-bonding interactions with water, six stable conformer structures have been found each for the monohydrate and syn-dihydrate. Of the three syn- and three anti-conformers of acetic acid with water, the most stable monohydrate structure is found to be that of the syn-conformer bonding with water in a cyclic double H-bonded geometry. Similarly, the syn-conformer bonding with two water molecules in a cyclic double H-bonded geometry has also been determined to be the most stable among the six plausible structures for the syn-dihydrate. Frequency analysis of the stable conformers has been performed and the vibrational spectra of the most stable monohydrate and dihydrate structures are compared with the experimental gas-phase and matrix data. Furthermore, the calculated binding energies between an acetic acid and a water molecule for both monohydrate and dihydrate are larger than that between two water molecules, which supports our recent experimental observation of coevaporation of acetic acid with water upon annealing acetic acid on ice.     

Theoretical IR spectra for water clusters (H2O)n (n = 6-22, 28, 30) and identification of spectral contributions from different H-bond conformations in gaseous and liquid water

The vibrational IR spectra in the O-H stretching region are computed for water clusters containing 6-22, 28, and 30 molecules using quantum-chemical calculations (B3LYP and an augmented basis set). For the cluster with 20 molecules, several different structures were studied. The vibrational spectrum was partitioned into contributions from different molecules according to their coordination properties. The frequency shifts depend on the number of donated/accepted H-bonds primarily of the two molecules participating in the H-bond, but also of the surrounding molecules H-bonding to these molecules. The frequencies of H-bonds between two molecules of the same coordination type are spread over a broad interval. The most downshifted hydrogen-bond vibrations are those donated by a single-donor 3-coordinated molecule where the H-bond is accepted by a single-acceptor molecule. The H-bonded neighbors influence the downshift, and their contribution can be rationalized in the same way as for the central dimer. Single donors/acceptors cause larger downshifts than 4-coordinated molecules, and the least downshift is obtained for double donors/acceptors. This result is at variance with the conception that experimental liquid water spectra may be divided into components for which larger downshifts imply higher H-bond coordination. A mean spectral contribution for each coordination type for the donor molecule was derived and fitted to the experimental liquid water IR spectrum, which enabled an estimation of the distribution of H-bond types and average number of H-bonds (3.0 +/- 0.2) in the liquid.     

A nine-dimensional calculation of the vibrational OH stretching and HOH bending spectrum of the water trimer

We have studied the vibrational high-frequency spectrum of the water trimer computationally. We expand an earlier study [J. Chem. Phys. A 2009, 113, 9124-9132] where we approximated the water trimer as three individually vibrating water monomer units. Some intramolecular potential energy coupling terms are now included in the previous model. The six OH bond lengths and the three HOH bending angles are used as the internal coordinates. The kinetic energy operator is a sum of the kinetic energy operators of the monomer units. We use the coupled cluster method with single, double, and perturbative triple excitations method [CCSD(T)] with augmented correlation consistent polarized valence triple-ζ (aug-cc-pVTZ) basis set to calculate the potential energy surface (PES). The counterpoise correction is included in the one-dimensional part of the PES. We calculate the vibrational energy eigenvalues using the variational method. The corresponding eigenfunctions are used to obtain the absorption intensities.     

Calculation of the O-H stretching vibrational overtone spectrum of the water dimer

The O-H stretching vibrational overtone spectrum of the water dimer has been calculated with the dimer modeled as two individually vibrating monomer units. Vibrational term values and absorption intensities have been obtained variationally with a computed dipole moment surface and an internal coordinate Hamiltonian, which consists of exact kinetic energy operators within the Born-Oppenheimer approximation of the monomer units. Three-dimensional ab initio potential energy and dipole moment surfaces have been calculated using the internal coordinates of the monomer units using the coupled cluster method including single, double, and perturbative triple excitations [CCSD(T)] with the augmented correlation consistent valence triple zeta basis set (aug-cc-pVTZ). The augmented correlation consistent valence quadruple zeta basis set (aug-cc-pVQZ), counterpoise correction, basis set extrapolation to the complete basis set limit, relativistic corrections, and core and valence electron correlations effects have been included in one-dimensional potential energy surface cuts. The aim is both to investigate the level of ab initio and vibrational calculations necessary to produce accurate results when compared with experiment and to aid the detection of the water dimer under atmospheric conditions.     

Origin of methyl torsional barrier in 1-methyl-2(1H)-pyridinimine and 3-methyl-2(1H)-pyridone: II. Ground state

To get the insight into the electronic structure-methyl torsion correlation in nitrogen heterocyclic molecules, a comparative study on torsion of the methyl group in 1-methyl-2(1H)pyridone (1MPY), 1-methyl-2(1H)pyridinimine (1MPI), and 3-methyl-2(1H)pyridone (3MPY) was carried out using ab initio calculations. To understand the barrier forming mechanism in the ground state and its consequence on the molecular structure, the ground state torsional potential has been investigated by partitioning the barrier energy using the natural bond orbital (NBO) theoretical framework. The NBO analysis reveals that the delocalization energy is the barrier forming term whereas the Lewis energy is always antibarrier for all these molecules. To get further insight into the effect of local electronic structure on the methyl torsional barrier, the individual bond-antibond interactions and structural energy contributions have been investigated. It was found that when the bond order difference between the vicinal bonds does not change appreciably during the course of methyl rotation, the local electronic interactions with the methyl group do not play any decisive role in barrier formation as observed in the case of 1MPY and 1MPI. In these cases, it is the skeletal relaxation during methyl rotation that plays an important role in determining the barrier. On the other hand, if the bond order change is appreciable as is the case for 3MPY, the local interactions alone suffice to describe the origin of the torsional barrier of the methyl group.     

TGA-DTA,infrared and x-ray powder diffraction studies on strontium nitroprusside and its hydrates

Dehydration data for the tetra-, di- and monohydrate of strontium nitroprusside and the vibrational behaviour of the water molecules in normal and deuterated samples agree with crystal data previously reported (for the di- and tetrahydrate as single crystals) and in this paper (monohydrate as a powder). Four distinct types of water molecules are present in the three hydrates with one type (oxygen bonded to Sr²⁺) in common. Other types are a non hydrogen-bonded molecule (dihydrate), a molecule bonded by a single hydrogen atom to the nitrogen atom of a cyanide group and a set of two molecules similarly bonded to the oxygen atom of the previous type (tetrahydrate). The spatial orientation of the NO groups of the nitroprusside ions in the tetrahydrate is confirmed by the observed dichroism of the corresponding stretching band.     

Chirality transfer through hydrogen-bonding: experimental and ab initio analyses of vibrational circular dichroism spectra of methyl lactate in water

The infrared vibrational absorption (VA) and vibrational circular dichroism (VCD) spectra of methyl lactate were measured in the 1000-1800 cm(-1) region in the CCl(4) and H(2)O solvents, respectively. In particular, the chirality transfer effect, i.e. the H-O-H bending bands of the achiral water subunits that are hydrogen-bonded to the methyl lactate molecule exhibit substantial VCD strength, was detected experimentally. A series of density functional theory calculations using B3PW91 and B3LYP functionals with 6-311++G(d,p) and aug-cc-pVTZ basis sets were carried out to simulate the VA and VCD spectra of the methyl lactate monomer and the methyl lactate-(H(2)O)(n) complexes with n = 1, 2, 3. The population weighted VA and VCD spectra of the methyl lactate monomer are in good agreement with the experimental spectra in CCl(4). Implicit polarizable continuum model was found to be inadequate to account for the hydrogen-bonding effect in the observed VA and VCD spectra in H(2)O. The methyl lactate-(H(2)O)(n) complexes with n = 1, 2, 3 were used to model the explicit hydrogen-bonding. The population weighted VA and VCD spectra of the methyl lactate-H(2)O binary complex are shown to capture the main spectral features in the observed spectra in aqueous solution. The theoretical modeling shows that the extent of chirality transfer depends sensitively on the specific binding sites taken by the achiral water molecules. The observation of chirality transfer effect opens a new spectral window to detect and to model the hydrogen-bonding solvent effect on VCD spectra of chiral molecules.     

Spectroscopic investigation of a new hybrid glass formed by the interaction between croconate ion and calcium polyphosphate

In this work, a new organic-inorganic hybrid material has been synthesized by the incorporation of croconate ion into a calcium polyphosphate coacervate. The hybrid so obtained was characterized by means of electronic and vibrational spectroscopies. The material is a homogeneous mixture described by a structural model, which includes helical chains of polyphosphate ions, where the calcium ion occupies the internal vacancies of the structure. The croconate ion appears to be occupying the regions outside the polymeric structure, surrounded by several water molecules. The electronic spectrum of the incorporated material shows a broad band peaking at the same wavelength region (363 nm) observed for the aqueous solution of croconate ion, and manifesting the Jahn-Teller effect as evidenced by the doublet structure of the band. The infrared spectrum is widely dominated by the absorption bands of the polyphosphate ion and the appearance of the carbonyl stretching band at ca. 1550 cm(-1) indicates the presence of croconate ion incorporated in the structure. The Raman spectrum of the material shows several vibrational bands related to the oxocarbon moiety; most of them are shifted in comparison with the free ion. These shifts can be understood in terms of strong hydrogen bonding interactions between water molecules and the oxocarbon moiety. The low temperature methodology proposed here can be well used in the preparation of new phosphate glasses containing organic moieties opening the route to an entirely new class of hybrid glasses.     

Combined use of Overhauser spectroscopy and NMR diffusion experiments for mapping the hydration structure of nucleosides: structure and dynamics of uridine in water

Complementary results from 13C intermolecular nuclear Overhauser effects (NOE), 1H-13C heteronuclear Overhauser spectroscopy (HOSEY) and 1H-NMR diffusion measurements were used for probing the structure of the first solvation shell of uridine in water. It is demonstrated that a cyclic dihydrate is formed. The two water molecules produce two hydrogen bonds with the two oxygen atoms from the pyrimidine ring and accept only one hydrogen bond from the amide proton. The dihydrate has only a short lifetime as compared with the rotational correlation time of the free nucleoside. The chemical exchange constant of the amide proton with water is then estimated by diffusion experiments. The results are consistent with previous data obtained for uracil in water and provide interesting information about water accessibility in nucleic acid bases.     

FT-IR, FT-Raman spectra, density functional computations of the vibrational spectra and molecular geometry of butylated hydroxy toluene

The FT-IR spectrum of 2,6-di-tert-butyl-4-methylphenol [butylated hydroxy toluene] was recorded in the region 4000-400 cm(-1). The FT-Raman spectrum of butylated hydroxy toluene was also recorded in the region 3500-50 cm(-1). The molecular structure and vibrational frequencies of butylated hydroxy toluene (BHT) have been investigated with combined experimental and theoretical study. Two stable conformers of the title compound were obtained from the result of geometry optimizations of these possible conformers. The conformer 1 is (approximately 2.6 kcal/mol) more stable than conformer 2. Geometry optimizations and vibrational frequency calculations were performed by BLYP and B3LYP methods using 6-31G(d), 6-31G(d,p) and 6-31+G(d,p) as basis sets. The scaled frequencies were compared with experimental spectrum and on the basis of this comparison; assignments of fundamental vibrational modes were examined. Comparison of the experimental spectra with harmonic vibrational wavenumbers indicates that B3LYP/6-31G(d) results are more accurate. Predicted electronic absorption spectra of BHT from TD-DFT calculation have been analyzed and compared with the experimental UV-vis spectrum. The calculated HOMO and LUMO energies show that the charge transfer occurs within the molecule.     

FT-IR, FT-Raman, NMR and UV-vis spectra, vibrational assignments and DFT calculations of 4-butyl benzoic acid

The solid phase FTIR and FT-Raman spectra of 4-butyl benzoic acid (4-BBA) have been recorded in the regions 400-4000 and 50-4000cm(-1), respectively. The spectra were interpreted in terms of fundamentals modes, combination and overtone bands. The structure of the molecule was optimized and the structural characteristics were determined by density functional theory (DFT) using B3LYP method with 6-311++G(d,p) as basis set. The vibrational frequencies were calculated for monomer and dimer by DFT method and were compared with the experimental frequencies, which yield good agreement between observed and calculated frequencies. The infrared and Raman spectra were also predicted from the calculated intensities. (13)C and (1)H NMR spectra were recorded and (13)C and (1)H nuclear magnetic resonance chemical shifts of the molecule were calculated using the gauge independent atomic orbital (GIAO) method. UV-visible spectrum of the compound was recorded in the region 200-400nm and the electronic properties HOMO and LUMO energies were measured by time-dependent TD-DFT approach. The geometric parameters, energies, harmonic vibrational frequencies, IR intensities, Raman intensities, chemical shifts and absorption wavelengths were compared with the available experimental data of the molecule.     

聚醋酸乙烯酯和共聚物大分子引发剂引发异丁烯正离子接枝共聚合反应

以AIBN为引发剂,通过自由基聚合方法先合成一定分子量(Mn=1.9×104g mol)和分子量分布(MWD,Mw Mn<2.5)的聚醋酸乙烯酯(PVAc)和醋酸乙烯酯(VAc)与醋酸异丙烯酯(IPAc)的无规共聚物聚(PVIPA).再以PVAc或PVIPA作为大分子引发剂,与共引发剂TiCl4配合,引发异丁烯进行正离子接枝共聚反应,并分别考察大分子引发剂用量、TiCl4浓度以及添加剂2,6二叔丁基吡啶(DtBP)或2甲基吡啶(MPY)对异丁烯聚合转化率和PVIPA或PVAc引发效率的影响,并进一步表征接枝共聚物的微观结构与组成含量.实验结果表明,PVIPA和PVAc可引发异丁烯进行正离子接枝共聚反应,前者的引发效率高于后者.加入适量DtBP或MPY时,可不同程度地提高引发效率.DtBP对减少聚合体系中微量水的引发和提高PVAc引发效率的作用更为明显,引发效率可达90%以上,加入适量添加剂MPY时,PVIPA引发效率可达60%左右.适当增加大分子引发剂用量和TiCl4浓度,也可提高PVIPA的引发效率至接近70%.在合适的实验条件下,可以得到极性主链为PVIPA与非极性支链为聚异丁烯(35.2%mol)的接枝共聚物PVIPA g PIB,该接枝共聚物的Mn为3.7×104g mol,分布指数MWD为2.52,且PIB支链平均分子量约为5.4×103g mol.     

Solvation of propylene oxide in water: vibrational circular dichroism, optical rotation, and computer simulation studies

The solvation of propylene oxide (PO) in water has been studied using vibrational circular dichroism (VCD) spectroscopy, optical rotation dispersion (ORD) spectroscopy, molecular dynamics simulations, and ab initio calculations. VCD and ORD measurements were carried out for PO as neat liquid, in CCl4, and in water solutions. The classical molecular dynamics simulations were carried out for the PO + water binary mixtures at different concentrations, and the solvation information was derived from the radial distribution functions obtained in the simulations. The total number of water molecules within the closest vicinity of PO was predicted to be about 3. The geometry optimizations, vibrational frequencies, and VCD intensities were evaluated for the PO monomer and the PO-(H2O)n clusters with n = 1-3 , using density functional theory calculations at the B3LYP/aug-cc-pVTZ level of theory. The chirality transfer VCD feature, which is a direct result of the explicit H-bonding between water and the chiral PO solute, was detected experimentally at the water bending band region. This feature exhibits high sensitivity to the solvation structure around PO. Comparison of the calculated and experimental chirality transfer features leads to the conclusion that the PO-water binary complex is the dominating species in aqueous solution at room temperature and the anti conformation, where water is on the opposite side of the oxirane ring of the PO methyl group, is preferred over the syn one. This conclusion is also supported by the complementary ORD studies. Possible contributions from the ternary and quaternary PO-water complexes are also discussed.     

Vibrational dynamics of the bending mode of water interacting with ions

We studied the vibrational relaxation dynamics of the bending mode (ν(2)) of the H(2)O water molecules in the presence of different salts (LiCl, LiBr, LiI, NaI, CsI, NaClO(4), and NaBF(4)). The linear and nonlinear spectra of the bending mode show distinct responses of water molecules hydrating the anions. We observe that the bending mode of water molecules that are hydrogen-bonded to an anion exhibits much slower relaxation rates (T(1)~1ps) than water molecules that are hydrogen-bonded to other water molecules (T(1)=400 fs). We find that the effect of the anion on the absorption spectrum and relaxation time constant of the water bending mode is not only determined by the strength of the hydrogen-bond interaction but also by the shape of the anion.