正交信号校正在正常成人血清1H NMR谱的代谢组分析中的滤噪作用评价

观察、比较正交信号校正(OSC)滤噪前后, 用不同的模式识别方法对正常成人血清代谢组¹H NMR谱进行分析的效果, 以探讨NMR代谢组学技术应用于临床研究和疾病早期诊断的可行性. 78例正常成人在采血前按常规要求禁食8 h, 记录血清一维600 MHz氢谱后, 分别采用主成分分析(PCA)、偏最小二乘法-判别分析(PLS-DA)以及簇类的独立软模式法(SIMCA)对氢谱进行模式识别分析. 结果表明: 虽然采血前并无其它诸如饮食、生活方式、生理周期等方面的严格限制, 采用OSC 滤噪后, PLS-DA能够完全区分不同性别的血清氢谱, 其判别能力优于PCA和SIMCA. 而且采用OSC滤噪与文献报道的未经OSC处理的PLS-DA法获得的与性别分类有关的主要NMR积分区段基本相同. 从OSC去除不同数目的隐变量后所致的PLS-DA模型的性能改变可见: OSC去除两个隐变量时, 前两个隐变量的特征值明显比后面的大; 剩余残差为20.82%, 即去除了79.18%的X变量中与反应变量Y不相关的系统变异. 此时PLS-DA计算所得的隐变量个数为1; 而不使用OSC或用OSC去除一个隐变量时, PLS-DA所得的隐变量个数分别为3和2. 作为PLS-DA模型质量的评价指标, R2X表示PLS-DA模型计算所获得的隐变量反映自变量X的变异的百分比, R2Y则表示隐变量反映因变量Y的变异的百分比, Q2 (cum)为交叉验证后PLS-DA模型所获隐变量能够预测X和Y变异的累计百分比. R2X在OSC去除两个隐变量时达到最低值, 表明此时PLS-DA计算模型包含的系统变异最少; R2Y与Q2 (cum)都达到80%以上并趋于稳定, 说明OSC去除两个隐变量时PLS-DA模型的质量优良. 显然, OSC可去除饮食、环境等因素的影响, 降低临床样本的不均一性, 这对于NMR代谢组学技术应用于临床研究至关重要. OSC滤噪去除的隐变量个数应根据剩余残差、去除隐变量的特征值大小、PLS-DA模型计算所得的隐变量个数和反映模型质量的相关指标加以判断.     

穿心莲中两个黄酮苷的波谱学研究

研究了穿心莲中抗血栓的活性成分. 应用AB-8大孔吸附树脂、聚酰胺柱色谱及薄层色谱进行分离, 应用波谱学(¹H NMR, ¹³C NMR, DQFCOSY, TOCSY, HMQC, HMBC, NOESY等)方法进行结构鉴定. 分离得到两个黄酮苷类化合物, 确定了¹H NMR, ¹³C NMR信号的全归属. 化合物1鉴定为5,4'-二羟基-7-甲氧基黄酮-6-O-β-D-葡萄糖苷, 化合物2鉴定为5,4'-二羟基-7-甲氧基黄酮-8-O-β-D-葡萄糖苷, 化合物1为首次从该植物中分得, 首次对两个化合物的碳谱和氢谱进行了全归属.     

β-D-葡萄糖基硫脲合成及生物活性研究

从1-溴-2,3,4,6-四乙酰化-β-D-吡喃葡萄糖I出发, 经异硫氰酸酯化反应, 合成了2,3,4,6-四乙酰化-β-D-吡喃糖基硫脲化合物IV, 再经脱乙酰化得到V. 将乙酰化糖基异硫氰酸酯的合成从文献的60%提高到80%. 所得化合物经元素分析, IR, MS, ¹H NMR和 ¹³C NMR谱学分析确定了结构, 并对产物进行了初步的除草活性测试.     

新的cis-Pt(diphos)(Ⅹ)2配合物的合成和谱学表征

本文合成了三个新的双膦螯合配体和一系列新的cis-Pt(diphos)X₂(diphos=R₂PCH₂CH₂PR₂,R=Et,n-Pr,n-Bu,i-Bu;X=Cl^-,Br^-,I^-,CN^-,SCN^-,NO₂^-)配合物,经过IR、³¹PNMR和元素分析表征了它们的结构,并观察到³¹P化学位移δ_p、铂-磷偶合常数J_p1-p与配体X的反位效应和双膦配体的σ-供电性质有关。此外,根据谱学研究,发现SCN^-和NO₂^-配体存在键合异构现象,并对谱带进行了归属。     

新型鹅去氧胆酸分子钳的设计合成和分子识别性质研究

以鹅去氧胆酸为隔离基, 芳香族化合物为手臂设计合成了一类新型的分子钳, 其结构经¹H NMR, IR, MS及元素分析确证. 利用紫外光谱滴定法考察了其与D/L氨基酸甲酯的对映选择性识别性能. 结果表明, 分子钳3a～3e对所考察的氨基酸甲酯均具有识别能力, 其对L-氨基酸甲酯的识别优于对D-氨基酸甲酯的识别. 从主客体的大小形状匹配及几何互补关系等方面对这些受体的识别能力及对映选择性进行了讨论.     

OH自由基的高精度量子化学研究

采用内收缩MRCI方法(Internally Contracted Multiconfiguration-Reference Configuration Interaction)研究了OH自由基, 计算得到其基态稳定构型的键长是0.09708 nm, 对应的实验值是0.096966 nm, 第一激发态的键长是0.10137 nm,实验值是0.10121 nm. 同时得到势能曲线PECs (Potential Energy Curve), 再分别由Murrell-Sorbie势能函数拟合计算和POLFIT程序计算得到OH自由基在基态X²Π和第一激发态A²Σ⁺时的光谱数据：平衡振动频率ω_e, 非谐性常数ω_eχ_e以及高阶修正ω_eY_e, 平衡转动常数B_e, 振转耦合系数α_e, 解离能D₀和垂直跃迁能量ν₀₀. 这些理论计算结果与最新的实验值非常吻合, 精确度比前人也有很大提高. 其中我们计算得到基态OH(X²Π)的解离能D₀＝35568.86 cm^－1, 第一激发态OH (A²Σ⁺)的解离能D₀＝18953.93 cm^－1, 从第一激发态A²Σ⁺ (ν＝0)到基态X²Π (v＝0)的垂直跃迁能ν₀₀＝32496.42 cm^－1.     

多C== N—基不对称Schiff碱及其稀土配合物的合成和催化

研究与探讨了多C==N—基空间不对称Schiff碱的合成, 合成了含有2个以上不同位置C==N— 基团的Schiff碱, 即四甘醇醛和2,4-二羟基苯甲醛缩双赖氨酸(TBLY)与稀土的配合物, 经元素分析、磁化率、光谱及¹H NMR, ¹H,¹H COSY, ¹³C NMR谱等表征, 确定其组成为Ln₃(TBLY)(NO₃)₃·nH₂O (Ln = La, n= 3; Ln = Nd, n= 5; Ln = Gd, Dy, Yb, Y, n= 7). 以半经验量子化学AM1法计算并探讨了在红外光谱和核磁共振谱中所观察到的烯胺键的存在. 该类新Schiff碱配合物不需助催化剂即可单独催化聚合甲基丙烯酸甲酯(MMA), 转化率可达80%, 黏均分子量约为22万.     

DMA水溶液的1H NMR研究

测量了N,N-二甲基乙酰胺(DMA)水溶液体系不同温度下全浓度范围的¹H NMR数据, 对体系中的缔合情况进行了讨论, 应用化学缔合模型求得了各缔合平衡常数K和缔合平衡的ΔH. 结合N,N-二甲基甲酰胺(DMF)和N-甲基乙酰胺(NMA)水溶液的研究结果, 发现酰胺自身结构和酰胺浓度是影响酰胺水溶液性质的主要因素.     

HCF(X~1A’)+SO2反应的动力学研究

用激光光解-激光诱导荧光方法研究了室温下(T＝293 K) HCF(X^~1A^’)自由基与SO₂分子的反应动力学. 实验中HCF(X^~1A^’)自由基是由213 nm激光光解HCFBr₂产生的, 用激光诱导荧光(LIF)检测HCF(X^~1A^’)自由基的相对浓度随着反应时间的变化, 得到此反应的二级反应速率常数为: k＝(1.81±0.15)×10^－12 cm³•molecule^－1•s^－1, 体系总压为1862 Pa. 高精度理论计算表明, HCF(X^~1A^’)和SO₂分子反应的机理是典型的加成-消除反应. 我们运用RRKM-TST理论计算了此二级反应速率常数的温度效应和压力效应, 计算结果和室温下测定的二级反应速率常数符合得较好.     

一类新型酯类离子液体的合成

以氯乙酸乙酯和氮杂环化合物(1-甲基咪唑、吡啶、N-乙基哌啶、N-甲基吗啉)为原料, 采用两步法合成了一类新型的酯类离子液体, 对合成的12个化合物进行了元素分析, ¹H NMR谱和一些物理性质的测定. 大多数化合物的熔点低于100 ℃, 为室温离子液体. 所合成离子液体的热稳定范围都比较宽, 性质稳定.     

NMR and chemometrics in tracing European olive oils: The case study of Ligurian samples

An NMR and chemometric analytical approach to classify extra virgin olive oils according to their geographical origin was developed within the European TRACE project (FP6-2003-FOOD-2-A, contract number: 0060942). Olive oils (896 samples) of three consecutive harvesting years (2005, 2006, and 2007) coming from Mediterranean areas were analyzed by ¹H NMR spectroscopy. Olive oil samples from Liguria, an Italian region, were chosen as a case study and PLS-DA and SIMCA modeling analyses were used to build up statistical models both to discriminate between Ligurian and non-Ligurian olive oils and to define the Ligurian olive oil class to confirm the declared provenience.     

Unwinding of the C‐Terminal Residues of Neuropeptide Y is critical for Y2 Receptor Binding and Activation

Despite recent breakthroughs in the structural characterization of G‐protein‐coupled receptors (GPCRs), there is only sparse data on how GPCRs recognize larger peptide ligands. NMR spectroscopy, molecular modeling, and double‐cycle mutagenesis studies were integrated to obtain a structural model of the peptide hormone neuropeptide Y (NPY) bound to its human G‐protein‐coupled Y₂ receptor (Y₂R). Solid‐state NMR measurements of specific isotope‐labeled NPY in complex with in vitro folded Y₂R reconstituted into phospholipid bicelles provided the bioactive structure of the peptide. Guided by solution NMR experiments, it could be shown that the ligand is tethered to the second extracellular loop by hydrophobic contacts. The C‐terminal α‐helix of NPY, which is formed in a membrane environment in the absence of the receptor, is unwound starting at T³² to provide optimal contacts in a deep binding pocket within the transmembrane bundle of the Y₂R.     

Asymmetrische Hg(II)-Komplexe mit Organothiolato- bzw. Organoselenolato-und Triazenato-Liganden

The mixed mercury complexes (2XC₆H₄)₂N₃HgY (X=CH₃, F, Cl, Br, I;Y=SC₂H₅, SC₆H₅, SeC₆H₅) have been prepared. Both the Hg–S and Hg–Se bonds and, in contrast to other mixed triazenato-mercury compounds, the triazenato-mercury bonds have been shown to be kinetically labile on the NMR time scale by means of⁷⁷Se and¹⁹⁹Hg NMR spectroscopy. Evidence has been obtained for the presence of (2XC₆H₄)₂N₃HgY together with HgY ₂ and [(2XC₆H₄)₂N₃]₂Hg in solution.

     

瓜环对氨基酸的分子识别研究

使用¹H NMR和UV-Vis光谱法研究了七、八元瓜环对九种天然氨基酸盐酸盐的分子识别作用. 结果表明, 瓜环对芳香侧基取代的L-酪氨酸、L-色氨酸、L-苯丙氨酸均能进行有效识别, 而侧链上不带芳香基团的氨基酸, 如L-组氨酸、L-谷氨酸、L-蛋氨酸、L-缬氨酸、L-白氨酸、L-丙氨酸, 与这些瓜环的作用相对较弱. 对于七元瓜环, 主客体间都以1∶1化学计量比形成包结物, 并得到它们相互作用的稳定常数; 八元瓜环与L-酪氨酸及L-色氨酸也以1∶1形成包结物, 而与L-苯丙氨酸以1∶2形成包结物. L-酪氨酸、L-色氨酸和L-苯丙氨酸荧光性质研究表明, 七、八元瓜环既可成为这些氨基酸荧光性质的增敏试剂, 也可成为它们荧光淬灭试剂, 这与氨基酸的结构有关.     

Improved analysis of multivariate data by variable stability scaling: application to NMR-based metabolic profiling

Variable scaling alters the covariance structure of data, affecting the outcome of multivariate analysis and calibration. Here we present a new method, variable stability (VAST) scaling, which weights each variable according to a metric of its stability. The beneficial effect of VAST scaling is demonstrated for a data set of ¹H NMR spectra of urine acquired as part of a metabonomic study into the effects of unilateral nephrectomy in an animal model. The application of VAST scaling improved the class distinction and predictive power of partial least squares discriminant analysis (PLS-DA) models. The effects of other data scaling and pre-processing methods, such as orthogonal signal correction (OSC), were also tested. VAST scaling produced the most robust models in terms of class prediction, outperforming OSC in this aspect. As a result the subtle, but consistent, metabolic perturbation caused by unilateral nephrectomy could be accurately characterised despite the presence of much greater biological differences caused by normal physiological variation. VAST scaling presents itself as an interpretable, robust and easily implemented data treatment for the enhancement of multivariate data analysis.     

三维全息原子场作用矢量用于HEPT类抗艾滋病药物的QSAR研究

采用本实验室新近提出的三维全息原子场作用矢量表征34个1-[(2-羟乙氧)甲基]-6-苯硫基胸腺嘧啶(HEPT)类抗艾滋病药物结构并与其活性建立定量构效关系模型. 采用逐步回归对变量进行筛选后, 运用多元线性回归(multiple linear regression, MLR)建模的复相关系数(R2cum)、交互校验的复相关系数(Q2cum)和模型的标准偏差(SD)分别为R2cum=0.928、Q2cum=0.883与SD=0.43, 均优于Hancsh报道的值(R2cum=0.911、Q2cum=0.863与SD=0.45). 模型具有良好的稳定性和预测能力, 表明三维全息原子场作用矢量能较好表征该类分子结构信息, 值得进一步推广应用.     

三维全息原子场作用矢量用于吡咯类抗艾滋病药物QSAR研究

采用三维全息原子场作用矢量(3D-HoVAIF)对32个吡咯类抗艾滋病药物进行结构参数化表征,并与其活性建立定量构效关系。分别采用多元线性回归(MLR)和偏最小二乘(PLS)进行建模,建模的复相关系数(R2cum)、交互校验复相关系数(Q2cum)和模型的标准偏差(SD)分别为R2cum=0.914、Q2cum=0.812、SD=0.236(MLR);R2cum=0.836、Q2cum=0.719、SD=0.314(PLS),结果均优于文献值(R2cum=0.667,Q2cum=0.581,SD=0.420)。所建模型具有良好的稳定性和预测能力,表明3D-HoVAIF能够较好地表征该类分子的结构,值得进一步推广应用。     

Laser excited fluorescence of CH in a low pressure flame

Production of CH(X²Π) in a low pressure H/O/C₂H₂ flame has been observed by laser excited fluorescence in the 0, 0 band of the A² Δ ← X²Π system at 431 nm. Laser excitation spectra have been recorded of the P, Q, and R branches with a bandwidth of 0.03 nm and of the head of the Q branch with a bandwidth of 0.0009 nm. Values of the spin—orbit and spin—rotation coupling constants in the A²Δ state have been obtained.     

Improper hydrogen-bonded cyclohexane C-Hax?Yax contacts: experimental evidence from H NMR spectroscopy of suitable axial cyclohexane models

B3LYP/6-31+G(d,p) calculations predicted the presence of improper hydrogen-bonded C-H_ax?Y_ax contacts of different strength in cyclohexane derivatives;¹ it was predicted that the addition of an appropriate bridging fragment X_ax between an axial substituent Y₁ and a cyclohexane carbon would strengthen the improper hydrogen-bonded contact C-H_ax?Y₁ when the X_ax-Y₁ bond vector bisects the cyclohexane ring. To support the theoretical predictions with experimental evidence for this effect, several 2-substituted adamantane analogues with suitable improper H-bonded C-H_ax?O contacts of different strength were synthesized, as models of the corresponding cyclohexane derivatives, and their ¹H NMR spectra were recorded at 298 K. The ¹H NMR signal separation within the cyclohexane ring γ-CH₂s is increased when the B3LYP/6-31+G(d,p)-calculated strength of the H-bonded C-H_ax?O=C_ax contact interaction is increased.