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1.
Calcium pyrophosphate hydrate (CPP, Ca2P2O7·nH2O) and calcium orthophosphate compounds (including apatite, octacalcium phosphate etc.) are among the most prevalent pathological calcifications in joints. Even though only two dihydrated forms of CPP (CPPD) have been detected in vivo (monoclinic and triclinic CPPD), investigations of other hydrated forms such as tetrahydrated or amorphous CPP are relevant to a further understanding of the physicochemistry of those phases of biological interest. The synthesis of single crystals of calcium pyrophosphate monohydrate (CPPM; Ca2P2O7·H2O) by diffusion in silica gel at ambient temperature and the structural analysis of this phase are reported in this paper. Complementarily, data from synchrotron X‐ray diffraction on a CPPM powder sample have been fitted to the crystal parameters. Finally, the relationship between the resolved structure for the CPPM phase and the structure of the tetrahydrated calcium pyrophosphate β phase (CPPT‐β) is discussed.  相似文献   

2.
《化学:亚洲杂志》2017,12(7):759-767
Zinc chlorophyll derivatives Zn‐1 – 3 possessing a tertiary amino group at the C31 position have been synthesized through reductive amination of methyl pyropheophorbide‐d obtained from naturally occurring chlorophyll‐a . In a dilute CH2Cl2 solution as well as in a dilute 10 %(v/v) CH2Cl2/hexane solution, Zn‐1 possessing a dimethylamino group at the C31 position showed red‐shifted UV/Vis absorption and intensified exciton‐coupling circular dichroism (CD) spectra at room temperature owing to its dimer formation via coordination to the central zinc by the 31‐N atom of the dimethylamino group. However, Zn‐2/3 bearing 31‐ethylmethylamino/diethylamino groups did not. The difference was dependent on the steric factor of the substituents in the tertiary amino group, where an increase of the carbon numbers on the N atom reduced the intermolecular N⋅⋅⋅Zn coordination. UV/Vis, CD, and 1H NMR spectroscopic analyses including DOSY measurements revealed that Zn‐1 formed closed‐type dimers via an opened dimer by single‐to‐double axial coordination with an increase in concentration and a temperature decrease in CH2Cl2, while Zn‐2/3 gave open and flexible dimers in a concentrated CH2Cl2 solution at low temperature. The supramolecular closed dimer structures of Zn‐1 were estimated by molecular modelling calculations, which showed these structures were promising models for the chlorophyll dimer in a photosynthetic reaction center.  相似文献   

3.
Two hydrate pseudopolymorphs of 3‐[(4‐amino‐2‐methylpyrimidin‐1‐ium‐5‐yl)methyl]‐4‐methyl‐1,3‐thiazol‐3‐ium‐5‐yl hydrogen pyrophosphate (TPP), viz. a dihydrate, C12H18N4O7P2S·2H2O, (I), and a trihydrate, C12H18N4O7P2S·3H2O, (II), were obtained during a structural study of vitamin B1 coenzyme. In both compounds, TPP is a neutral zwitterion, with its pyrophosphate group doubly deprotonated and its pyrimidine ring protonated, and it assumes the usual `F' conformation in terms of the two torsion angles about the bonds by which the methylene group links the thiazolium and pyrimidinium rings [1.1 (3) and 79.7 (3)° for (I), and 2.0 (3) and 75.5 (3)° for (II)]. In (I), two TPP molecules are linked by a pair of O—H...O hydrogen bonds into a phosphate‐pairing dimer. N—H...O hydrogen bonds connect the dimers into a sheet parallel to (101). In (II), the TPP molecules are self‐assembled solely by N—H...O hydrogen bonds, generating a tape structure along [001]. A comparison of the four known hydrate pseudopolymorphs of TPP shows that the phosphate‐pairing dimers are basic building units for the formation of two‐dimensional networks.  相似文献   

4.
The square‐pyramidal Mg center in the title compound, [Mg(C32H16N8)(CH4O)], is five‐coordinate due to the formation of back‐to‐back π–π dimers that saturate the vacant apical site of the metal coordination sphere. Each complex is a member of a back‐to‐back and a face‐to‐face dimer; the latter are tethered by two strong O—H⋯N hydrogen bonds. The dimers form columns that likely determine the solid‐state packing. The phthalocyaninate ligands are essentially planar, with a slight `hat visor' conformation character.  相似文献   

5.
The title racemic complex, bis[μ‐N‐(2‐oxidobenzylidene)‐d ,l ‐glutamato(2−)]bis[(isoquinoline)copper(II)] ethanol disolvate, [Cu2(C12H11NO5)2(C9H7N)2]·2C2H6O, adopts a square‐pyramidal CuII coordination mode with a tridentate N‐salicylideneglutamato Schiff base dianion and an isoquinoline ligand bound in the basal plane. The apex of the pyramid is occupied by a phenolic O atom from the adjacent chelate molecule at an apical distance of 2.487 (3) Å, building a dimer located on the crystallographic inversion center. The Cu...Cu spacing within the dimers is 3.3264 (12) Å. The ethanol solvent molecules are hydrogen bonded to the dimeric complex molecules, forming infinite chains in the a direction. The biological activity of the title complex has been studied.  相似文献   

6.
Tetrakis(diethyl phosphonate), Tetrakis(ethyl phenylphosphinate)‐, and Tetrakis(diphenylphosphine oxide)‐Substituted Phthalocyanines The title compounds 7, 9 , and 11 are obtained by tetramerization of diethyl (3,4‐dicyanophenyl)phosphonate ( 5 ), ethyl (3,4‐dicyanophenyl)phenylphosphinate ( 8 ), and 4‐(diphenylphosphinyl)benzene‐1,2‐dicarbonitrile ( 10 ). The 31P‐NMR spectra of the phthalocyanines 7, 9 , and 11 and of their metal complexes present five to eight signals confirming the formation of four constitutional isomers with the expected C4h, D2h, C2v, and Cs symmetry. In the FAB‐MS of the Zn, Cu, and Ni complexes of 7 and 9 , the peaks of dimeric phthalocyanines are observed. By gel‐permeation chromatography, the monomeric complex [Ni( 7 )] and a dimer [Ni( 7 )]2 can be separated. These dimers differ from the known phthalocyanine dimers, i.e., possibly the P(O)(OEt)2 and P(O)(Ph)(OEt) substituents in 7 and 9 are involved in complexation. The free phosphonic acid complex [Zn( 12 )] and [Cu( 12 )] are H2O‐soluble. In the FAB‐MS of [Zn( 12 )], only the peaks of the dimer are present; the ESI‐MS confirms the existence of the dimer and the metal‐free dimer. In the UV/VIS spectrum of [Zn( 12 )], the hypsochromic shift characteristic for the known type of dimers from 660–700 nm to 620–640 nm is observed. As in the FAB‐MS of [Zn( 12 )], the free phosphinic acid complex [Zn( 13 )] shows only the monomer, an ESI‐MS cannot be obtained for solubility problems. The UV/VIS spectrum of [Zn( 13 )] demonstrates the existence of the monomer as well as of the dimer.  相似文献   

7.
1,2,3‐Trimethylpyridinium aquatrichloridocuprate(II), (C8H12N)[CuCl3(H2O)], (I), 3,4‐dimethylpyridinium aquatrichloridocuprate(II), (C7H10N)[CuCl3(H2O)], (II), and 2,3‐dimethylpyridinium aquatrichloridocuprate(II), (C7H10N)[CuCl3(H2O)], (III), exhibit the same fundamental structure, with (I) and (II) isomorphous and with the unit‐cell constants of (III) similar to the reduced unit‐cell constants of (I) and (II). The distorted square‐planar [CuCl3(H2O)] complex [mirror symmetric in (I) and (II)] forms two semicoordinate Cu...Cl bonds to a neighboring complex to produce a dimer with 2/m symmetry [only inversion symmetry in (III)]. The semicoordinate Cu...Cl bond length of the dimer shows significant elongation at 295 K compared with that at 100 K, while the coordinate Cu—Cl bond lengths are slightly contracted at 295 K compared with those at 100 K. The inorganic dimers are linked by eight hydrogen bonds to four neighboring dimers to establish a checkerboard network layer in the ab plane, with voids between the dimers that accommodate, on both sides, inversion‐related organic cation pairs. The organic cations are required by mirror‐plane symmetry to be disordered in (I) and (II). The organic cations and [CuCl3(H2O)] complexes are nearly coplanar and tilted out of the layer plane to establish a hybrid organic–inorganic layer structure parallel to (202) [(11) in (III)], with hydrate columns (defined by water molecules) and hydrophobic columns (defined by methyl groups) parallel to each other [and along the 21 axes in (I) and (II)]. In 1,1‐dimethylpiperidinium aquatrichloridocuprate(II), (C7H16N)[CuCl3(H2O)], (IV), the bulkier organic cation prevents semicoordinate bonding between complexes, which are hydrogen bonded side‐to‐side in zigzag chains that place water molecules in columns along half of the 21 axes.  相似文献   

8.
The energy surface of the dihydrated fluoride anion (F·2H2O)–1 is studied for a number of different geometry points near the equilibrium structure within the SCF LCAO MO framework, using an extended gaussian basis set to approximate the molecular wavefunctions. For the first and second hydration step of the fluoride anion the corresponding hydration energies are calculated to beB 1 scf =24.1 kcal/mole andB 2 SCF =20.8 kcal/mole (experimental measurements: 23.3 kcal/mole and 16.6 kcal/mole, respectively). The hydration energies and equilibrium bond distances obtained for the dihydrated fluoride anion (F·2H2O) are compared with those found for the monohydrate (FHOH) and with corresponding results of the dihydrated lithium cation (Li · 2H2O)+. The system (F·2H2O) is taken as a very simple model to discuss some basic features of the hydration process of small ions and to study the influence of a negative ion on an adjacent hydrogen bond.We would like to thank our technical staff for valuable help in carrying out these calculations.  相似文献   

9.
The structure of [Co(H2O)4][VO(PO4)]2 is composed of [VO(PO4)] layers and interlayer tetrahydrated Co2+ ions. Alternating VO5 square pyramids and PO4 tetrahedra share O‐atom vertices, thus forming the vanadyl phosphate layers. Two vanadyl oxo groups from neighbouring layers are coordinated to each Co atom in a trans fashion, with Co—O distances of 2.157 (4) Å, thus generating a three‐dimensional framework structure.  相似文献   

10.
The title structure, [Rh2(C7H5O3)4(C2H6OS)2]·[Rh2(C4H7­O2)4(C2H6OS)2]·2C2H6O, contains two discrete neutral Rh–Rh dimers cocrystallized as the ethanol disolvate. Each dimer is situated on an inversion center. The butyrate chain displays disorder in one C‐atom position. In each dimer, the di­methyl sulfoxide ligand (dmso) is bound via S, as expected. The ethanol is a hydrogen‐bond acceptor for one p‐hydroxy­benzoate hydroxyl group and acts as a hydrogen‐bond donor to the dmso O atom of a neighboring p‐hydroxy­benzoate dirhodium complex. A third hydrogen bond is formed from the other p‐hydroxy­benzoate hydroxyl group to the dmso O atom of a butyrate–dirhodium complex.  相似文献   

11.
The title isomorphous compounds, tetra‐μ‐but‐2‐enoato‐bis[diaqua(but‐2‐enoato)dysprosium(III)]–2,6‐diaminopurine (1/2), [Dy2(C4H5O2)6(H2O)4]·2C5H6N6, and tetra‐μ‐but‐2‐enoato‐bis[diaqua(but‐2‐enoato)holmium(III)]–2,6‐diaminopurine (1/2), [Ho2(C4H5O2)6(H2O)4]·2C5H6N6, consist of [Ln(crot)3(H2O)2]2 dimers (crot is crotonate or but‐2‐enoate; Ln is the lanthanide cation), built up around inversion centres and completed by 2,6‐diaminopurine molecules. The lanthanide cation is coordinated by three chelating crotonate units and two water molecules. One of the chelating carboxylate groups acts also in a bridging mode sharing one O atom with both cations and the final result is a pair of DyO9 tricapped prismatic polyhedra linked to each other through a central (Dy—O)2 loop. A feature of the structures is the existence of a complex intermolecular interaction scheme involving two sets of tightly interlinked non‐intersecting one‐dimensional structures, one of them formed by the [Dy(crot)3(H2O)2]2 dimers (running along [100] and linked by O—H...O hydrogen bonds) and the second formed by 2,6‐diaminopurine molecules (evolving along [010] linked by N—H...N hydrogen bonds).  相似文献   

12.
Heteroannularly substituted ferrocene derivatives can act as model systems for various hydrogen‐bonded assemblies of biomol­ecules formed, for instance, by means of O—H⋯O and N—H⋯O hydrogen bonding. The crystal structure analysis of 1′‐(tert‐butoxy­carbonyl­amino)­ferrocene‐1‐carbox­ylic acid, [Fe(C10H14NO2)(C6H5O2)] or (C5H4COOH)Fe(C5­H4NHCOOC(CH3)3, reveals two independent mol­ecules within the asymmetric unit, and these are joined into discrete dimers by two types of intermolecular hydrogen bonds, viz. O—H⋯O and N—H⋯O. The –COOH and –NHCOOR groups are archetypes for dimer formation via two eight‐membered rings. The O—H⋯O hydrogen bonds [2.656 (3) and 2.663 (3) Å] form a cyclic carboxylic acid dimer motif. Another eight‐membered ring is formed by N—H⋯O hydrogen bonds [2.827 (3) and 2.854 (3) Å] between the N—H group and an O atom of another carbamoyl moiety. The dimers are assembled in a herring‐bone fashion in the bc plane.  相似文献   

13.
Absorbance, excitation, and emission measurements have been performed with methyl benzoate and five model compounds, C6H5COO (CH2)xOOCC6H5, x = 2–6. Under appropriate conditions, three of the model compounds (those with x = 3, 4, 5) show evidence for the formation of intramolecular ground-state dimers. The model compound with x = 5 can form two types of dimers which emit with different energies. The model compound with x = 3 forms one of these dimers, and the model compound with x = 4 prefers the other ground-state dimer. Molecular modeling of the dimers suggests that the two conformations of the ground-state dimers differ in the orientation of the two C?O bonds. In the one dimer these two bonds are nearly parallel, but in the other they make an angle of about 120°. © 1993 John Wiley & Sons, Inc.  相似文献   

14.
Bis(hinokitiolato)copper(II), Cu(hino)2, exhibits both antibacterial and antiviral properties, and has been previously shown to exist in two modifications. A third modification has now been confirmed, namely tetrakis(μ2‐3‐isopropyl‐7‐oxocyclohepta‐1,3,5‐trien‐1‐olato)bis(3‐isopropyl‐7‐oxocyclohepta‐1,3,5‐trien‐1‐olato)tricopper(II)–bis(μ2‐3‐isopropyl‐7‐oxocyclohepta‐1,3,5‐trien‐1‐olato)bis[(3‐isopropyl‐7‐oxocyclohepta‐1,3,5‐trien‐1‐olato)copper(II)] (1/1), [Cu(C10H11O2)2]3·[Cu(C10H11O2)2]2, where 3‐isopropyl‐7‐oxocyclohepta‐1,3,5‐trien‐1‐olate is the systematic name for the hinokitiolate anion. This new modification is composed of discrete [cis‐Cu(hino)2]2[trans‐Cu(hino)2] trimers and [cis‐Cu(hino)2]2 dimers. The Cu atoms are bridged by μ2‐O atoms from the hinokitiolate ligands to give distorted square‐pyramidal and distorted octahedral CuII coordination environments. Hence, the CuII environments are CuO5/CuO6/CuO5 for the trimer and CuO5/CuO5 for the dimer. Each trimer and dimer has crystallographically imposed inversion symmetry. The trimer has never been observed before, the dimer has been seen only once before, and the combination of the two together in the same lattice is unprecedented. The CuO5 cores exhibit four strong basal Cu—O bonds [1.915 (2)–1.931 (2) Å] and one weak apical Cu—O bond [2.652 (2)–2.658 (2) Å]. The CuO6 core exhibits four strong equatorial Cu—O bonds [1.922 (2)–1.929 (2) Å] and two very weak axial Cu—O bonds [2.911 (3) Å]. The bite angles for the chelating hinokitiolate ligands range from 83.13 (11) to 83.90 (10)°.  相似文献   

15.
In the isomorphous title compounds, [Cd2(C8H4O4)2(C19H10ClFN4)2(H2O)2] and [Zn2(C8H4O4)2(C19H10ClFN4)2(H2O)2], the CdII centre is seven‐coordinated by two N atoms from one [2‐(2‐chloro‐6‐fluorophenyl)‐1H‐imidazo[4,5‐f][1,10]phenanthroline (L) ligand, one water O atom and four carboxylate O atoms from two different benzene‐1,2‐dicarboxylate (1,2‐bdc) ligands in a distorted pentagonal–bipyramidal coordination, while the ZnII centre is six‐coordinated by two N atoms from one L ligand, one water O atom and three carboxylate O atoms from two different 1,2‐bdc ligands in a distorted octahedral coordination. Each pair of adjacent metal centres is bridged by two 1,2‐bdc ligands to form a dimeric structure. In the dimer, each L ligand coordinates one metal centre. The dimer is centrosymmetric, with a crystallographic inversion centre midway between the two metal centres. The aromatic interactions lead the dimers to form a two‐dimensional supramolecular architecture. Finally, O—H...O and N—H...O hydrogen bonds reinforce the two‐dimensional structures of the two compounds.  相似文献   

16.
Rare‐Earth‐Metal Coordination Polymers: Syntheses and Crystal Structures of Six New Pimelinates, [M(Pim)(PimH)(H2O)](H2O) (M = Ce, Pr) and [M2(Pim)3(H2O)4] (M = Tb, Ho, Er, Tm) The new rare‐earth metal carboxylates [M(Pim)(PimH)(H2O)](H2O) (M = Ce ( 1 ), Pr ( 2 )) and [M2(Pim)3(H2O)4] (M = Tb ( 3 ), Ho ( 4 ), Er ( 5 ), Tm ( 6 )) were prepared from the reaction of pimelinic acid with CeO2, Pr6O11, Tb4O7, HoCl3, ErCl3 and Tm(NO3)3, respectively. Their crystal structures were determined by single‐crystal X‐ray diffraction. [M(Pim)(PimH)(H2O)](H2O) crystallize in the monoclinic space group P21/n (no. 14) with a = 909.6(1), b = 870.6(1), c = 2240.5(2) pm, β = 92.30(1)°, Z = 4 (crystal data for M = Ce). The isostructural pimelinate‐hydrates [M2(Pim)3(H2O)4] crystallize with orthorhombic symmetry, Pbcn (no. 60), with a = 1392.5(1), b = 902.3(1), c = 2408.8(2) pm, Z = 4 (crystal data for M = Tb). The rare‐earth cations have coordination numbers of 10 ( 1 , 2 ) and 9 ( 3 , 4 , 5 and 6 ), respectively. In the crystal structure of [M(Pim)(PimH)(H2O)](H2O) bidentate and tridentate‐bridging carboxylate groups form rather dense structures in which chains are bridged to layers and further to networks. Pimelinic acid molecules fill the channels. In [M2(Pim)3(H2O)4] tridentate‐bridging carboxylate groups coordinating to two rare‐earth ions lead to dimers that are linked with other dimers to strands. The channels thus formed between the strands are rather small in diameter. They do not contain any non‐coordinated water molecules.  相似文献   

17.
In the crystal structure of the synthetically prepared title compound, [Cu(C14H12N2)2](C4HO4)·0.5H2O or [Cu(dmphen)2](HSq)·0.5H2O (dmphen is 2,9‐dimethyl‐1,10‐phenanthroline or neocuproine and HSq is hydrogen squarate), the CuI centre has distorted tetra­hedral coordination geometry comprised of four N atoms from two bidentate dmphen ligands. The squarate monoanions form a ten‐membered dimer, graph set R22(10), linked by two strong inter­molecular O—H⋯O hydrogen bonds. These squarate dimers are linked into chains that propagate along the [100] direction. An extensive three‐dimensional network of C—H⋯O hydrogen bonds and π–π inter­actions is responsible for stabilization of the crystal structure.  相似文献   

18.
Bis(acetylacetonate)alumo‐oxo‐tetraphenyldisiloxane‐metal(II) dihydrates [(acac)2Al(O–SiPh2–O–SiPh2–O)]2M(H2O)2 (M = Mg, Fe, Co, Ni) were obtained from the corresponding acetyl‐acetonate‐dihydrates (acac)2M(H2O)2 by reaction with the alumosiloxane [O–Ph2Si–O–SiPh2–O]4Al4(OH)4. These new compounds display two acac ligands at the aluminum atoms as well as disilatrioxy chains linking the two aluminum atoms forming a (Al–O–Si–O–Si–O)2 cycle (X‐ray structure analyses). Within this cycle the divalent metal ions M2+, to which two water molecules in trans positions are linked, are installed in almost planar MO4 coordination spheres. Using water free (acac)2Ni a different product forms: both reactants combine in a 2:1 ratio to yield [O–Ph2Si–O–SiPh2–O]4Al4(OH)2O(OH2)Ni2(acac)4. Here, three of the acac ligands were transposed to the aluminum atoms. The nickel atoms are in a distorted octahedral coordination mode from oxygen atoms of the ligands. When iron(III)tris(acetylacetonate) reacts with the alumosiloxane [O–Ph2Si–O–SiPh2–O]3Al2O(OH)Fe2(acac)3 was isolated, in which the two iron atoms still display one of the acac ligands. One of the aluminum atoms is in a tetrahedral oxygen environment, whereas the other is in the center of a trigonal bi‐pyramid formed of oxygen atoms either of the siloxane or of acac. The iron atoms have five‐ or sixfold coordination from oxygen atoms of siloxane, acac, hydroxide or oxide.  相似文献   

19.
The title compound, [Co2(C12H11N2)2(C12H10N2)(H2O)8][Co(H2O)6](SO4)4·8H2O, consists of bis(4‐pyridyl)ethenedicobalt(II) cations, hexaaqua­cobalt cations, sulfate anions and water solvent molecules that are linked by hydrogen bonds into a network structure. In the hexaaquacobalt cation, the six water molecules are coordinated in an octahedral geometry to the Co atom, which lies on an inversion centre. The other cation is a 1,2‐bis(4‐pyridyl)ethene‐bridged centrosymmetric dimer, consisting of protonated 1,2‐bis(4‐pyridyl)­ethene cations, a bridging 1,2‐bis(4‐pyridyl)ethene ligand and tetraaqua­cobalt cations. Each Co atom is six‐coordinated by four water molecules and two N atoms from a protonated 1,2‐bis(4‐pyridyl)ethene cation and the bridging 1,2‐bis(4‐pyridyl)­ethene ligand, and the geometry around each Co atom is octahedral.  相似文献   

20.
The title compounds, C11H11BrO3, (I), and C11H11NO5, (II), respectively, are derivatives of 6‐hydroxy‐5,7,8‐trimethylchroman‐2‐one substituted at the 5‐position by a Br atom in (I) and by a nitro group in (II). The pyranone rings in both molecules adopt half‐chair conformations, and intramolecular O—H...Br [in (I)] and O—H...Onitro [in (II)] hydrogen bonds affect the dispositions of the hydroxy groups. Classical intermolecular O—H...O hydrogen bonds are found in both molecules but play quite dissimilar roles in the crystal structures. In (I), O—H...O hydrogen bonds form zigzag C(9) chains of molecules along the a axis. Because of the tetragonal symmetry, similar chains also form along b. In (II), however, similar contacts involving an O atom of the nitro group form inversion dimers and generate R22(12) rings. These also result in a close intermolecular O...O contact of 2.686 (4) Å. For (I), four additional C—H...O hydrogen bonds combine with π–π stacking interactions between the benzene rings to build an extensive three‐dimensional network with molecules stacked along the c axis. The packing in (II) is much simpler and centres on the inversion dimers formed through O—H...O contacts. These dimers are stacked through additional C—H...O hydrogen bonds, and further weak C—H...O interactions generate a three‐dimensional network of dimer stacks.  相似文献   

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