Structure and Stability of Endohedral Complexes X@（HBNH）12

Using quantum chemistry methods B3LYP/6-31＋＋G（d,p） to optimize endohedral complexes X@（HBNH）12 （X=Li^0/＋, Na^0/＋, K^0/＋, Be^0/2＋, Mg^0/2＋, Ca^0/2＋, H and He）, the geometries with the lowest energy were achieved. Inclusion energy, standard equilibrium constant, natural charge, spin density, ionization potentials, and HOMO-LUMO energy gap were also discussed. The calculation predicted that X=Na^0/＋, K^0/＋, Mg^0/2＋, Ca^0/2＋, H and He are nearly located at the center of （HBNH）12 cluster. Li^＋ lies in less than 0.021 nm departure from the center. Li and Be^0/2＋ dramatically deviate from the center. （HBNH）12 prefers to enclose Li^＋, Be^2＋, Mg^2＋, and Ca^2＋ in it than others. Moreover, M@（HBNH）12 （M=Li, Na, K） species are ＂superalkalis＂ in that they possess lower first ionization potentials than the Cs atom （3.9 eV）.     

内含式化合物X@Al12P12的结构与稳定性研究

采用B3LYP/6-31G*方法, 对内含式化合物X@Al₁₂P₁₂ (X＝Li^0/＋, Na^0/＋, K^0/＋, Be^0/2＋, Mg^0/2＋, Ca^0/2＋, H和He)的不同对称性构型进行计算, 讨论其最稳定构型的几何参数、布居分析、偶极矩、电离势、包含能、频率、HOMO-LUMO能隙和自旋密度．发现X@Al₁₂P₁₂化合物中, 客体X＝Na^0/＋, K^0/＋, Mg和He几乎处在笼的中心, Be和Ca^0/2＋处在中心附近0.033 nm的半径内, Li^0/＋, Be^2＋, Mg^2＋和H很大程度上偏离笼的中心位置. 大部分金属内含式化合物的C₃对称性构型稳定．Li^0/＋, Be^0/2＋, Mg^2＋, Ca^2＋和H与其它离子相比更易嵌入笼内形成稳定的内含式化合物.     

内含式化合物X@(HBNH)12的结构与稳定性

采用B3LYP/6-31++G(d,p)方法，对内含式化合物X@(HBNH)₁₂ (X = Li^0/+, Na^0/+, K^0/+, Be^0/2+, Mg^0/2+, Ca^0/2+, H和He)的不同对称性构型进行计算，讨论其最稳定构型的几何参数、包含能、平衡常数、自然电荷、自旋密度、电离势和HOMO-LUMO能隙。发现在X@(HBNH)₁₂化合物中，客体Na^0/+, K^0/+, Mg^0/2+, Ca^0/2+, H和He几乎处在笼的中心，Li⁺处在中心附近0.021 nm的半径内，Li和Be^0/2+很大程度上偏离笼的中心位置。Li⁺, Be²⁺, Mg²⁺和Ca²⁺与其它离子相比，更易嵌入笼内形成稳定的内含式化合物。而且，M@(HBNH)₁₂ (M = Li, Na,K)的第一电离势比Cs(3.9 eV)原子小，是超碱金属。     

内含式化合物X@B12P12的结构与稳定性研究

采用B3LYP/6-31G*方法，对内含式化合物X@B₁₂P₁₂(X=Li^0/+、Na^0/+、K^0/+、Be^0/2+、Mg^0/2+、Ca^0/2+、H和He)的不同对称性构型进行了计算，讨论其最稳定构型的几何参数、布居分析、偶极矩、电离势、包含能、振动频率、能隙和自旋密度． 发现在X@B₁₂P₁₂化合物中，客体X=Li、Na^0/+、K^0/+、Mg^0/2+、Ca^0/2+和He处在偏离笼的中心0.006 nm的半径内． Be²⁺沿着C₃轴偏离中心点0.279 nm． 在Be@B₁₂P₁₂和H@B₁₂P₁₂的基态结构中，Be和H与笼上的B原子成键． 除Li@B₁₂P₁₂、 Be²⁺@B₁₂P₁₂和He@ B₁₂P₁₂外， 其余结构为C_s对称稳定构型．     

啤酒酵母生理代谢过程中钠、钾、镁、钙离子含量变化的跟踪检测

采用空气-乙炔火焰原子吸收光谱法分别测定了啤酒酵母发酵液中的Na^ 、K^ 、Mg^2 、Ca^2 离子动态变化中的含量,用La^3 盐消除P对Ca^3 的干扰,以Sr^2 盐作为Na^ 、K^ 的消电离剂。本实验室采用配制培养基,通过对不同种类及不同发酵阶段培养的发酵液样品进行测定,以研究在啤酒酵母生长代谢过程中Na^ 、K^ 、Mg^2 、Ca^2 离子代谢动态变化。方法的Na^ 、K^ 、Mg^2 、Ca^2 相对标准偏差(RSD)分别为0．31％,0．73％。1．78％,0．28％;样品加标回收率为98％-107％;检出限：Na^ 为0．159mg／L,K^ 为0．789nag／L,Mg^2 为0．039mg／L,Ca^2 为0．029mg／L。该方法简便快速,具有很好的精密度。     

硼氢及客体二十面体簇合物的结构和稳定性

在(n=0、－1、－2、－3、－4)簇合物几何构型及稳定性研究的基础上,进一步对它的各种内含式和外 接式二十面体簇合物(X@B12H122－和XB12H122－,X=H0/＋、Li0/＋、He、Ne、Be0/2＋、Na＋、Mg2＋)进行了优化和 计 算.发现在内含式结构X@ B12H122－中,当X=Li＋、Be2＋、Mg2＋时,构型较稳定;在外接式结构中, XB12H122－(C3v)结构比XB12H122－(C2v)的结构稳定.通过IRC计算,确定XB12H122－(C2v)是X与B12H122－作用生成产物XB12H122－(C3v)的一种过渡态.     

天然沸石粉阳离子吸附性能分析方法的探讨

通过比较不同浓度的NH4Ac溶液对天然沸石粉所吸附的碱金属和碱土金属离子多次连续提取的效果,将由交换性K^ 、Na^ 、Ca^2 和Mg^2 加和所获得的阳离子交换量与由常规土壤阳离子交换量测定法获得的阳离子交换量进行比较,发现常规的土壤分析方法不适于测定天然沸石粉所吸附的交换性K^ 、Na^ 、Ca^2 和Mg^2 及阳离子交换量。建议用K^ 、Na^ 、Ca^2 和Mg^2 5次提取总量分别作为天然沸石粉所吸附的交换性K^ 、Na^ 、Ca^2 和Mg^2 的估算值,并把其提取量加和作为沸石粉阳离子交换量的估算值．     

八核茂铁-钌金属大环对钙离子的电化学和荧光识别(英)

The ruthenium unit was introduced into the redox-active molecular polygon to assembly new Ru-Fc metallocycles (Compound 1), in which the redox active (ferrocene) and fluoresecent (ruthenium) signaling subunits are directly attached by the putative cation-binding sites. The compound 1 displayed high selectivity for Ca^2 by electrochemical tests. The measurements of the fluorescence spectra on titration of 1 with Ca^2 , Li^ , Na^ , K^ , Mg^2 or Ba^2 ion indicate the unique ability of 1 to detect Ca^2 ions selectively.     

X@（HAINH）12和X（HAINH）12（X=Fˉ，Clˉ，Brˉ，O2ˉ，S2ˉ，Se2ˉ）复合物的结构和稳定性

用DFT的B3LYP方法在6-31G(d)基组的水平上，对闭式多面体簇合物(HAlNH)12及其内含式X@(HAlNH)12和外接式X(HAINH)12(X=Fˉ，CIˉ，Brˉ，O2ˉ，S2ˉ，Se2ˉ)复合物的结构进行了构型优化和能量计算，并讨论了几何构型、自然键轨道(NBO)、振动频率、能量参数及NMR数据与结构的关系，最后得到复合物结构的稳定性信息，具有Th对称性的X@(HAINH)12(X=Fˉ，CIˉ，Brˉ，S2ˉ，Se2ˉ)复合物和具有C3对称性的O2ˉ@(HAINH)12复合物为内含式的基态结构，从能量角度分析，内含式复合物比外接式复合物的结构稳定．     

X@(HAINH)_(12)和X(HAINH)_(12)(X=F~-,Cl~-,Br~-,O~(2-),S~(2-),Se~(2-))复合物的结构和稳定性

用DFT的B3LYP方法在6-31G(d)基组的水平上,对闭式多面体簇合物(HA1NH)12及其内含式X@(HA1NH)12外接式X(HA1NH)12(X=F-,Cl-,Br-,O2-,S2-,Se2-)复合物的结构进行了构型优化和能量计算,并讨论了几何构型、自然键轨道(NBO)、振动频率、能量参数及NMR数据与结构的关系,最后得到复合物结构的稳定性信息,具有Th对称性的X@(HA1NH)12(X=F-,Cl-,Br-,S2-,Se2-)复合物和具有C3对称性的O2-@(HA1NH)12复合物为内含式的基态结构,从能量角度分析,内含式复合物比外接式复合物的结构稳定.     

The energetics of shooting ions into the dodecahedrane cage

The activation barriers and energy profiles along the inclusion coordinate for the penetration of H+, He, Li+, Be+, Be2+, and Mg2+ into dodecahedrane 1 vary considerably with the nature of the projectile. Using Hartree-Fock and MP2 derived structures and energies, the overall process of creating endohedral X n+@1 complexes is examined in detail.     

On the viability of small endohedral hydrocarbon cage complexes: X@C4H4, X@C8H8, X@C8H14, X@C10H16, X@C12H12, AND X@C16H16

Small hydrocarbon complexes (X@cage) incorporating cage-centered endohedral atoms and ions (X = H(+), H, He, Ne, Ar, Li(0,+), Be(0,+,2+), Na(0,+), Mg(0,+,2+)) have been studied at the B3LYP/6-31G(d) hybrid HF/DFT level of theory. No tetrahedrane (C(4)H(4), T(d)()) endohedral complexes are minima, not even with the very small hydrogen atom or beryllium dication. Cubane (C(8)H(8), O(h)()) and bicyclo[2.2.2]octane (C(8)H(14), D(3)(h)()) minima are limited to encapsulating species smaller than Ne and Na(+). Despite its intermediate size, adamantane (C(10)H(16), T(d)()) can enclose a wide variety of endohedral atoms and ions including H, He, Ne, Li(0,+), Be(0,+,2+), Na(0,+), and Mg(2+). In contrast, the truncated tetrahedrane (C(12)H(12), T(d)()) encapsulates fewer species, while the D(4)(d)() symmetric C(16)H(16) hydrocarbon cage (see Table of Contents graphic) encapsulates all but the larger Be, Mg, and Mg(+) species. The host cages have more compact geometries when metal atoms, rather than cations, are inside. This is due to electron donation from the endohedral metals into C-C bonding and C-H antibonding cage molecular orbitals. The relative stabilities of endohedral minima are evaluated by comparing their energies (E(endo)) to the sum of their isolated components (E(inc) = E(endo) - E(cage) - E(x)) and to their exohedral isomer energies (E(isom) = E(endo) - E(exo)). Although exohedral binding is preferred to endohedral encapsulation without exception (i.e., E(isom) is always exothermic), Be(2+)@C(10)H(16) (T(d)(); -235.5 kcal/mol), Li(+)@C(12)H(12) (T(d)(); 50.2 kcal/mol), Be(2+)@C(12)H(12) (T(d)(); -181.2 kcal/mol), Mg(2+)@C(12)H(12) (T(d)(); -45.0 kcal/mol), Li(+)@C(16)H(16) (D(4)(d)(); 13.3 kcal/mol), Be(+)@C(16)H(16) (C(4)(v)(); 31.8 kcal/mol), Be(2+)@C(16)H(16) (D(4)(d)(); -239.2 kcal/mol), and Mg(2+)@C(16)H(16) (D(4)(d)(); -37.7 kcal/mol) are relatively stable as compared to experimentally known He@C(20)H(20) (I(h)()), which has an E(inc) = 37.9 kcal/mol and E(isom) = -35.4 kcal/mol. Overall, endohedral cage complexes with low parent cage strain energies, large cage internal cavity volumes, and a small, highly charged guest species are the most viable synthetic targets.     

Effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water coordination on the structure of glycine and zwitterionic glycine

Interactions between metal ions and amino acids are common both in solution and in the gas phase. Here, the effect of metal ions and water on the structure of glycine is examined. The effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water on structures of Gly.Mn+(H2O)m and GlyZwitt.Mn+(H2O)m (m = 0, 2, 5) complexes have been determined theoretically by employing the hybrid B3LYP exchange-correlation functional and using extended basis sets. Selected calculations were carried out also by means of CBS-QB3 model chemistry. The interaction enthalpies, entropies, and Gibbs energies of eight complexes Gly.Mn+ (Mn+ = Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) were determined at the B3LYP density functional level of theory. The computed Gibbs energies DeltaG degrees are negative and span a rather broad energy interval (from -90 to -1100 kJ mol(-1)), meaning that the ions studied form strong complexes. The largest interaction Gibbs energy (-1076 kJ mol(-1)) was computed for the NiGly2+ complex. Calculations of the molecular structure and relative stability of the Gly.Mn+(H2O)m and GlyZwitt.Mn+(H2O)m (Mn+ = Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+; m = 0, 2, and 5) systems indicate that in the complexes with monovalent metal cations the most stable species are the NO coordinated metal cations in non-zwitterionic glycine. Divalent cations Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+ prefer coordination via the OO bifurcated bonds of the zwitterionic glycine. Stepwise addition of two and five water molecules leads to considerable changes in the relative stability of the hydrated species. Addition of two water molecules at the metal ion in both Gly.Mn+ and GlyZwitt.Mn+ complexes reduces the relative stability of metallic complexes of glycine. For Mn+ = Li+ or Na+, the addition of five water molecules does not change the relative order of stability. In the Gly.K+ complex, the solvation shell of water molecules around K+ ion has, because of the larger size of the potassium cation, a different structure with a reduced number of hydrogen-bonded contacts. This results in a net preference (by 10.3 kJ mol(-1)) of the GlyZwitt.K+H2O5 system. Addition of five water molecules to the glycine complexes containing divalent cations Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+ results in a net preference for non-zwitterionic glycine species. The computed relative Gibbs energies are quite high (-10 to -38 kJ mol(-1)), and the NO coordination is preferred in the Gly.Mn+(H2O)5 (Mn+ = Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) complexes over the OO coordination.     

内含式复合物X@(HAlNH)12 (X=Be,Mg, Ca,Zn, Al+, Ga+)的结构和稳定性

在研究闭式多面体(HAlNH)12簇合物几何构型及稳定性的基础上, 用DFT的B3LYP方法在6-31G(d)的水平上, 对其内含式复合物X@(HAlNH)12 (X= Be, Mg, Ca, Zn, Al+, Ga+)进行了构型优化和能量计算, 并讨论了稳定结构的几何构型、自然键轨道(NBO)、振动频率、能量参数及NMR数据与结构的关系. 用Gaussian 03的QST3方法确定了客体X通过笼面6-元环的迁移过渡态(TS)结构, 并用IRC方法对所得TS结构进行了验证. 最后得到内含式复合物X@(HAlNH)12结构在热力学和动力学上的稳定性信息, 其中复合物Ga+@(HAlNH)12的结构相对最稳定.     

Favorable pendant-amino metal chelation in VX nerve agent model systems

We have performed DFT computational studies [B3LYP, 6-31+G] to obtain metal ion coordination isomers of VX-Me [MeP(O)(OMe)(SCH2CH2NMe2)], a model of two of the most lethal nerve agents: VX [MeP(O)(OEt)(SCH2CH2N(iPr)2)] and Russian-VX [MeP(O)(OCH2CHMe2)(SCH2CH2N(Et)2)]. Our calculations involved geometry optimizations of the neutral VX-Me model as well as complexes with H+, Li+, Na+, K+, Be2+, Mg2+, and Ca2+ that yielded 2-8 different stable chelation modes for each ion that involved mainly mono- and bidentate binding. Importantly, our studies revealed that the [O(P),N] bidentate binding mode, long thought to be the active mode in differentiating the hydrolytic path of VX from other nerve agents, was the most stable for all ions studied here. Binding energy depended mainly on ionic size as well as charge, with binding energies ranging from 364 kcal mol(-1) for Be2+ to 33 kcal mol(-1) for K+. Furthermore, calculated NMR shifts for VX-Me correlate to experimental values of VX.     

Theoretical Studies on the Interactions of Cations with Diazine

1 INTRODUCTION Interaction between cations and π electron systems is a kind of common and important non-covalent inter- action[1～21]. It could be observed in many systems, such as gas ion-molecule complexes and biological macromolecular proteins. Especially, in biological macromolecular systems, this interaction is signi- ficant for revealing the structures and functions of proteins or disclosing the atomic essence of protein- ligand effect. Interaction between benzene and metal ions h…