Comparative study of the bonding in the first series of transition metal 1:1 complexes M-L (M = Sc, ..., Cu; L = CO, N(2), C(2)H(2), CN(-), NH(3), H(2)O, and F(-))

The nature of the chemical bonding in the 1:1 complexes formed by the fourth period transition metals (Sc, ..., Cu) with 14 electrons (N(2), CN(-), C(2)H(2)) and 10 electrons (NH(3), H(2)O, F(-)) ligands has been investigated at the ROB3LYP/6-311+G(2d) level by the ELF topological approach. The bonding is ruled by the nature of the ligand. The 10 electrons and anionic ligands are very poor electron acceptors and therefore the interaction with the metal is mostly electrostatic and for all metal except Cr the multiplicity is given by the [Ar]c(n)() configuration of the metallic core (n = Z - 20). The electron acceptor ligands which have at least a lone pair form linear or bent complexes involving a dative bond with the metal and the rules proposed previously for monocarbonyls hold. In the case of ethyne, it is not possible to form a linear complex and the cyclic C(2)(v)() structure imposed by symmetry possesses two covalent M-C bonds, therefore the multiplicity is given by the local core configuration [Ar]c(n)() for all metals except Mn and Ni.     

Structure, bonding, and catecholase mechanism of copper bispidine complexes

Oxygen activation by copper(I) complexes with tetra- or pentadentate mono- or dinucleating bispidine ligands is known to lead to unusually stable end-on-[{(bispidine)Cu}(2)(O(2))](2+) complexes (bispidines are methyl-2,4-bis(2-pyridin-yl)-3,7-diazabicyclo-[3.3.1]-nonane-9-diol-1,5-dicarboxylates); catecholase activity of these dinuclear Cu(II/I) systems has been demonstrated experimentally, and the mechanism has been thoroughly analyzed. The present density functional theory (DFT) based study provides an analysis of the electronic structure and catalytic activity of [{(bispidine)Cu}(2)(O(2))](2+). As a result of the unique square pyramidal coordination geometry, the d(x(2)-y(2)) ground state leads to an unusual σ/π bonding pattern, responsible for the stability of the peroxo complex and the observed catecholase activity with a unique mechanistic pathway. The oxidation of catechol to ortho-quinone (one molecule per catalytic cycle and concomitant formation of one equivalent of H(2)O(2)) is shown to occur via an associative, stepwise pathway. The unusual stability of the end-on-peroxo-dicopper(II) complex and isomerization to copper(II) complexes with chelating catecholate ligands, which inhibit the catalytic cycle, are shown to be responsible for an only moderate catalytic activity.     

A dodecanuclear Zn cluster sandwiched by polyoxometalate ligands

A dodecazinc silicotungstate K(20)Na(2)[Zn(6)(OH)(7)(H(2)O)(Si(2)W(18)O(66))](2)·34H(2)O (1) has been synthesized and characterized by X-ray crystallography, elemental analysis, infrared, UV-vis spectroscopy, cyclic voltammetry, acid-base titration, and DFT calculations. The twelve zinc atoms between the two [Si(2)W(18)O(66)](16-) frameworks make this complex more stable hydrolytically than the heteropolytungstate ligands, [Si(2)W(18)O(66)](16-), themselves. The structurally unique central Zn(12) core is formed by the fusion of two [Zn(6)(OH)(7)(H(2)O)](5+) units through two edge-sharing Zn6 atoms. DFT B3LYP calculations give HOMO-LUMO and (HOMO - 1)-LUMO energy gaps of ～3.65 and 3.91 eV, respectively, as compared to the band gap in ZnO of 3.35 eV.     

Steric and hydrogen-bonding effects on the stability of copper complexes with small molecules

A series of the copper(II) complexes with tripodal tetradentate tris(pyridyl 2-methyl)amine-based ligands possessing the hydrogen-bonding 6-aminopyridine units (tapa, three amino groups; bapa, two amino groups; mapa, one amino group) have been synthesized, and their copper(II) complexes with a small molecule such as dioxygen and azide have been studied spectroscopically and structurally. The reaction of their Cu(II) complexes with NaN(3) have given the mononuclear copper complexes with azide in an end-on mode, [Cu(tapa)(N(3))]ClO(4) (1a), [Cu(bapa)(N(3))]ClO(4) (2a), [Cu(mapa)(N(3))]ClO(4) (3a), and [Cu(tpa)(N(3))]ClO(4) (4a) (tpa, no amino group). The crystal structures have revealed that the coordination geometries around the metal centers are almost a trigonal-bipyramidal rather than a square-planar except for 1a with an intermediate between them. The UV-vis and ESR spectral data indicate that the increase of NH(2) groups of ligands causes the structural change from trigonal-bipyramidal to square-pyramidal geometry, which is regulated by a combination of steric repulsion and hydrogen bond. The steric repulsion of amino groups with the azide nitrogen gives rise to elongation of the Cu-N(py) bonds, which leads to the positive shift of the redox potentials of the complexes. The hydrogen bonds between the coordinated azide and amino nitrogens (2.84-3.05 A) contribute clearly to the fixation of azide. The Cu(I) complexes with bapa and mapa ligands have been obtained as a precipitate, although that with tapa was not isolated. The reactions of the Cu(I) complexes with dioxygen in MeOH at -75 degrees C have given the trans-micro-1,2 peroxo dinuclear Cu(II) complexes formulated as [((tapa)Cu)(2)(O(2))](2+) (1c), [((bapa)Cu)(2)(O(2))](2+) (2c), and [((mapa)Cu)(2)(O(2))](2+) (3c), whose characterizations were confirmed by UV-vis, ESR, and resonance Raman spectroscopies. UV-vis spectra of 1c, 2c, and 3c exhibited intense bands assignable to pi(O(2)(2)(-))-to-d(Cu) charge transfer (CT) transitions at lambda(max)/nm (epsilon/M(-1)cm(-1)) = 449 (4620), 474 (6860), and 500 (9680), respectively. The series of the peroxo adducts generated was ESR silent. The resonance Raman spectra exhibited the enhanced features assignable to two stretching vibrations nu((16)O-(16)O/(18)O-(18)O)/cm(-1) and nu(Cu-(16)O/Cu-(18)O)/cm(-1) at 853/807 (1c), 858/812 (2c), 847/800 (3c), and at 547/522 (2c), 544/518 (3c), respectively. The thermal stability of the peroxo-copper species has increased with increase in the number of the hydrogen-bonding interactions between the peroxide and amino groups.     

Supramolecular architectures assembled by the interaction of purine nucleobases with metal-oxalato frameworks. Non-covalent stabilization of the 7H-adenine tautomer in the solid-state

The synthesis, crystal structure and variable-temperature magnetic measurements of the compounds [Mn(mu-ox)(H2O)(7H-pur-kappaN9)]n (1), {[Mn(mu-ox)(H2O)2].(7H-ade).(H2O)}n (2) and {[Cu(mu-ox)(H2O)(7H-ade-kappaN9)][Cu(mu-ox)(mu-H2O)(7H-ade-kappaN9)]. approximately 10/3H2O}n (3), (where ox: oxalato dianion, pur: purine, and ade: adenine) are reported. Compounds 1and 2 contain one-dimensional chains in which manganese(II) atoms are bridged by bis-bidentate oxalato ligands. The distorted octahedral geometry around each metal centre is completed in compound 1 by one water molecule and the imidazole N9 donor site of the purine ligand, which is a rare example of direct binding between the Mn(II) ion and the N donor site of an isolated nucleobase. Unlike 1, the adenine moiety in compound 2 is not bonded to manganese atoms and the metal coordination polyhedron is filled by two water molecules in a cis-arrangement. Its crystal building is constructed from pi-stacked layers of Watson-Crick hydrogen-bonded adenine...(H2O2)...adenine aggregates and zig-zag Mn(II)-oxalato chains held together by means of a strong network of hydrogen bonding interactions. The nucleobase exists in the lattice as the 7H-adenine tautomer which represents an unprecedented solid-state characterization of this minor tautomer as free molecule (without metal coordination) stabilized through non-covalent interactions. Compound consists of two slightly different [Cu(ox)(H2O)(7H-ade-kappaN9)] units in which the nucleobase coordinates through the imidazole N9 atom. The planar complex entities are parallel stacked and joined by means of long Cu-O bonds involving oxygen atoms from the oxalato and the aqua ligands, giving one-dimensional chains with a [4 + 1] square-planar pyramidal and a [4 + 2] octahedral coordination around the metal centre, respectively. Self-assembled process of compound 3 is further driven by an in-plane network of hydrogen bonding interactions to generate a porous 3D structure containing parallel channels filled by guest water molecules. Variable-temperature magnetic susceptibility measurements of all the complexes show the occurrence of antiferromagnetic interactions between the paramagnetic centres. DFT calculations have been performed to check the influence of packing in the stability of the 7H-amino tautomer of 2 and in the complex geometry of 3.     

Nature of the reactants and influence of water on the supramolecular assembly

The influences of the nature of reactants and water on the self-assembly of cationic Cu(II) complex structures containing N-(2-pyridylmethyl)glycine (Hpgly) and N-(2-pyridylmethyl)-l-alanine (Hpala) ligands have been investigated. A metallamacrocycle [Cu(6)(pgly)(3)(spgly)(3)] (ClO(4))(6).9H(2)O has been formed by the reaction of [Cu(pgly)(2)].2H(2)O with Cu(ClO(4))(2).6H(2)O. The hexameric cation has Schiff base and reduced Schiff base ligands alternatively bonded to Cu(II) to provide cyclohexane-like conformation with a cavity diameter of 9.4 A. The reaction of Cu(ClO(4))(2).6H(2)O with Hpgly.HCl yielded [Cu(pgly)(H(2)O)](ClO(4)), which is presumed to have 1D coordination polymeric structure. A [K subset [12-MC-3]] metallacrown, [K(ClO(4))(3)[Cu(3)(pala)(3)]](ClO(4)) has been isolated by reacting Cu(ClO(4))(2) with Kpala in MeCN/MeOH. This [K subset [12-MC-3]] metallacrown further reacts with water to form an infinite 1D coordination polymer [Cu(pala)(H(2)O)(ClO(4))](n)(), which can also be obtained by conducting the reaction in aqueous MeOH.     

Synthesis, structure, and electrochemical properties of copper(I) complexes with S/N homoscorpionate and heteroscorpionate ligands

Dinuclear Cu(I) complexes with bifunctionalized homoscorpionate ligands, hydrotris(thioxotriazolyl)borato [Li(Tr(Me,o)(-)(Py)) (1) and Li(Tr(Mes,Me)) (2)], and the heteroscorpionate ligand hydro[bis(thioxotriazolyl)-3-(2-pyridyl)pyrazolyl]borato [K(Br(Mes)pz(o)(-)(Py))] (3) were synthesized and crystallographically characterized. The complexes [Cu(Tr(Mes,Me))](2) (4) and [Cu(Tr(Me,o)(-)(Py))](2) (5) exhibit a similar coordination geometry where every metal is surrounded by three thioxo groups in a trigonal arrangement. The presence of a [B-H...Cu] three-center-two-electron interaction in both compounds causes the overall coordination to become tetrahedrally distorted (S(3)H coordination for each metal). The complex [Cu(Br(Mes)pz(o)(-)(Py))](2) (6) presents a trigonal geometry in which the metals interact with two thioxo groups and a bridging pyrazolyl nitrogen atom. A weak contact with a pyridine nitrogen atom completes the coordination of the metals (S(2)N,N' coordination for each metal). [Cu(Tr(Mes,Me))](2), [Cu(Tr(Me,o)(-)(Py))](2), and [Cu(Br(Mes)pz(o)(-)(Py))](2) exhibit fluxional behavior in solution as evidenced by variable-temperature NMR spectroscopy, and for 5 and 6 two species in equilibrium [in the ratio 2/1 for 5 (CDCl(3)) and 3/2 for 6 (CD(2)Cl(2))] are distinguishable in the (1)H NMR spectra at 270 K. 2D-NOESY spectra recorded at 270 K assisted in the attribution of solution molecular geometries for each isomer of 5 and 6. The free energy of activation (DeltaG()(Tc)) was determined for both equilibria from the evaluation of the coalescence temperature. DFT calculations were performed to describe plausible molecular geometry for the minor isomer of 5 and 6 and to propose a possible mechanism of interconversion between major and minor isomers. Cyclic voltammograms were recorded in CH(2)Cl(2) (3 and 6) or CH(2)Cl(2)/CH(3)CN (1/1, v/v) (2, 4, and 5) solutions using 0.1 M TBAHFP or TBAOTf as supporting electrolytes. [Cu(Tr(Mes,Me))](2), [Cu(Tr(Me,o)(-)(Py))](2), and [Cu(Br(Mes)pz(o)(-)(Py))](2) exhibit a quasi-reversible Cu(I)/Cu(II) redox behavior with E(pa) = +719 mV and E(pc) = +538 mV for 4, E(pa) = +636 mV and E(pc) = -316 mV for 5, and E(pa) = +418 mV and E(pc) = -319 mV for 6.     

Ligand influence over the formation of dinuclear [2+2] versus trinuclear [3+3] Cu(I) Schiff base macrocyclic complexes

The preparation and characterization of three new macrocyclic ligands with pendant arms based on the [2+2] condensation of isophthalaldehyde and the corresponding triamine substituted at the central N-atom is reported. None of these new macrocyclic ligands undergo any equilibrium reaction, based on imine hydrolysis to generate [1+1] macrocyclic formation or higher oligomeric compounds, such as [3+3], [4+4], etc., at least within the time scale of days. This indicates the stability of the newly generated imine bond. In sharp contrast, the reaction of the [2+2] macrocyclic Schiff bases with Cu(I) generates the corresponding dinuclear Cu(I) complexes [Cu(2)(L(1))](2+), 1(2+); [Cu(2)(L(2))(CH(3)CN)(2)](2+), 2(2+); and [Cu(2)(L(3))(CH(3)CN)(2)](2+), 3(2+), together with their trinuclear Cu(I) homologues [Cu(3)(L(4))](3+), 4(3+); [Cu(3)(L(5))(CH(3)CN)(3)](3+), 5(3+); and [Cu(3)(L(6))(CH(3)CN)(3)](3+), 6(3+), where the [2+2] ligand has undergone an expansion to the corresponding [3+3] Schiff base that is denoted as L(4), L(5), or L(6). The conditions under which the dinuclear and trinuclear complexes are formed were analyzed in terms of solvent dependence and synthetic pathways. The new complexes are characterized in solution by NMR, UV-vis, and MS spectroscopy and in the solid state by X-ray diffraction analysis and IR spectroscopy. For the particular case of the L(2) ligand, MS spectroscopy is also used to monitor the metal assisted transformation where the dinuclear complex 2(2+) is transformed into the trinuclear complex 5(3+). The Cu(I) complexes described here, in general, react slowly (within the time scale of days) with molecular oxygen, except for the ones containing the phenolic ligands 2(2+) and 5(3+) that react a bit faster.     

Syntheses, crystal structures, and magneto-structural correlations of novel Cu(II) complexes containing a planar [Cu(mu-L1)]2 (HL1 = 3-(2-pyridyl)pyrazole) unit: from dinuclear to tetranuclear and then to one-dimensional compounds

Seven new Cu(II) complexes based on a binuclear planar unit [Cu(mu-L(1))](2), [[Cu(mu-L(1))(NO(3))(H(2)O)](2) (1), [Cu(mu-L(1))(HL(1))(ClO(4))](2) (2), [Cu(4)(mu-L(1))(6)(NO(3))(2)] (3), [Cu(4)(mu-L(1))(6)(L(1))(2)] (4), [Cu(4)(mu-L(1))(6)(mu-L(2))](n) (5), [Cu(4)(mu-L(1))(6)(mu-L(3))](n) (6), [[Cu(4)(mu-L(1))(4)(mu-L(4))(2)](H(2)O)(3)](n) (7) (HL(1) = 3-(2-pyridyl)pyrazole, L(2) = 1,8-naphthalenedicarboxylate, L(3) = terephthalate, L(4) = 2,6-pyridinedicarboxylate)}, have been synthesized and characterized by elemental analysis, IR, and X-ray diffraction. In 1 and 2, the Cu(II) centers are linked by deprotonated pyrazolyl groups to form dinuclear structures. 3 and 4 have similar gridlike tetranuclear structures in which two additional deprotonated L(1) ligands bridge two [Cu(mu-L(1))](2) units perpendicularly. 5 and 6 consist of similar one-dimensional (1-D) chains in which gridlike tetranuclear copper(II) units similar to that of 3 are further linked by L(2) or L(3) ligands, respectively. And, in 7, L(4) ligands link [Cu(mu-L(1))](2) binuclear units to form a tetranuclear gridlike structure in chelating/bridging mode and simultaneously bridge the tetranuclear units to form a 1-D chain. The magnetic properties of all complexes were studied by variable-temperature magnetic susceptibility and magnetization measurements. The obtained parameters of J range from -33.1 to -211 cm(-1), indicating very strong antiferromagnetic coupling between Cu(II) ions. The main factor that affects the |J| parameter is the geometry of the Cu(N(2))(2)Cu entity. From the magnetic point of view, 1 and 2 feature "pure" dinuclear, 3 and 5 tetranuclear, and 4, 6, and 7 pseudodinuclear moieties.     

New oxamidato-bridged Cu(II)-Ni(II) complexes: supramolecular structures with thiocyanate ligands and hydrogen bonds. Magnetostructural studies: DFT calculations

Four new supramolecular compounds of Cu(II)-Ni(II) have been synthesized and characterized: [Cu(Me(2)oxpn)Ni(mu-NCS)(H(2)O)(tmen)](2)(ClO(4))(2) (1), [Cu(Me(2)oxpn)Ni(mu-NCS)(H(2)O)(tmen)](2)(PF(6))(2) (2), [Cu(oxpn)Ni(mu-NCS)(NCS) (tmen)](n) (3), and [Cu(Me(2)oxpn)Ni(mu-NCS)(NCS)(tmen)](n) (4), where oxpn = N,N'-bis(3-aminopropyl)oxamidate, Me(2)oxpn = N,N'-bis(3-amino-2,2'-dimethylpropyl)oxamidate, and tmen = N,N,N',N'-tetramethylethylenediamine. Their crystal structures were solved. Complexes 1 and 2 have the same tetranuclear cationic part but a different counteranion. The cationic part consists of two [Cu(Me(2)oxpn)Ni] moieties linked by SCN(-) bridged ligands and intra-tetranuclear hydrogen bonds. In the case of complex 3, a two-dimensional system was built, the thiocyanate ligand linking the dinuclear units gives a chain, and the chains are linked together by hydrogen bonds; intrachain hydrogen bonds are also present. For complex 4, the thiocyanate ligands produce intermolecular linkages between the dinuclear entities, giving a one-dimensional system; intrachain hydrogen bonds are also present. The magnetic properties of the four complexes were studied by susceptibility measurements vs temperature. DFT calculations were made to study the contribution of the SCN(-) and hydrogen bond bridges in the magnetic coupling.     

Spectroscopic characterization, X-ray structure, antimicrobial activity and DFT calculations of novel dipicolinate copper(II) complex with 2,6-pyridinedimethanol

Novel dipicolinate complex of copper(II) ion, [Cu(dmp)(dpc)]·0.8H(2)O [dmp: 2,6-pyridinedimethanol; dpc: dipicolinate or pyridine-2,6-dicarboxylate], has been prepared and fully characterized by single crystal X-ray structure determination. The central copper(II) ion is bonded to dpc and dmp ligands through pyridine nitrogen atom together with two oxygen atom, forming the distorted octahedral geometry. The complex molecules, connected via O-H···O hydrogen bonds, form a supramolecular structure. H(2)dpc, [Cu(dpc)(H(2)O)(3)] and [Cu(dmp)(dpc)]·0.8H(2)O were screened for antimicrobial activity against Gram-positive, Gram-negative bacteria and yeast. H(2)dpc and [Cu(dpc)(H(2)O)(3)] exhibited antibacterial and antifungal activity, while [Cu(dmp)(dpc)]·0.8H(2)O exhibited activity only for Gram-positive bacteria. The geometry optimization and EPR parameters were carried out using the following unrestricted hybrid density functionals: LSDA, BPV86, B3LYP, B3PW91, MPW1PW91, PBEPBE and HCTH. Although the supramolecular interactions have some influences on the molecular geometry in solid state phase, calculated data show that the predicted geometries can reproduce the structural parameters. The electronic station in the frontier orbitals of the copper complex calculated from the experimental data is compared to the results of time-depended DFT calculations with the polarizable continuum model. Calculated vibrational frequencies are consistent with the experimental IR data.     

Monomeric, tetrameric, and polymeric copper di-tert-butyl phosphate complexes containing pyridine ancillary ligands

The reaction of di-tert-butyl phosphate (((t)BuO)(2)P(O)(OH), dtbp-H) with copper acetate in the presence of pyridine (py) and 2,4,6-trimethylpyridine (collidine) has been investigated. Copper acetate reacts with dtbp-H in a reaction medium containing pyridine, DMSO, THF, and CH(3)OH to yield a one-dimensional polymeric complex [Cu(dtbp)(2)(py)(2)(mu-OH(2))](n) (1) as blue hollow crystalline tubes. The copper atoms in 1 are octahedral and are surrounded by two terminal phosphate ligands, two pyridine molecules, and two bridging water molecules. The mu-OH(2) ligands that are present along the elongated Jahn-Teller axis are responsible for the formation of the one-dimensional polymeric structure. Recrystallization of 1 in a DMSO/THF/CH(3)OH mixture results in the reorganization of the polymer and its conversion to a more stable tetranuclear copper cluster [Cu(4)(mu(3)-OH)(2)(dtbp)(6)(py)(2)] (2) in about 60% yield. The molecular structure of 2 is made up of a tetranuclear core [Cu(4)(mu(3)-OH)(2)] which is surrounded by six bidentate bridging dtbp ligands. While two of the copper atoms are pentacoordinate with a tbp geometry, the other two copper atoms exhibit a pseudooctahedral geometry with five normal Cu-O bonds and an elongated Cu-O linkage. The pentacoordinate copper centers bear an axial pyridine ligand. The short Cu.Cu nonbonded distances in the tetranuclear core of 2 lead to magnetic ordering at low temperature with an antiferromagnetic coupling at approximately 20 K (J(P) = -44 cm(-1), J(c) = -66 cm(-1), g = 2.25, and rho = 0.8%). When the reaction between di-tert-butyl phosphate (dtbp-H) and copper acetate was carried out in the presence of collidine, large dark-blue crystals of monomeric copper complex [Cu(dtbp)(2)(collidine)(2)] (3) formed as the only product. A single-crystal X-ray diffraction study of 3 reveals a slightly distorted square-planar geometry around the copper atom. Thermogravimetric analysis of 1-3 revealed a facile decomposition of the coordinated ligands and dtbp to produce a copper phosphate material around 500 degrees C. An independent solid-state thermolysis of all the three complexes in bulk at 500-510 degrees C for 2 days produced copper pyrophosphate Cu(2)P(2)O(7) along with small quantities of Cu(PO(3))(2) as revealed by DR-UV spectroscopic and PXRD studies.     

Syntheses, structures, and properties of copper(II) complexes of bis(2-pyridylmethyl) derivatives of o-, m-, and p-phenylenediamine and aniline

Copper(II) complexes of the ligand 1,n-bis[bis(2-pyridylmethyl)amino]benzene with n = 2-4 (1,n-tpbd) and its mononuclear derivative bis(2-pyridylmethyl)aniline (phbpa) were synthesized and structurally characterized. Magnetic measurements and DFT calculations were performed on [CuCl2(phbpa)], [Cu2Cl4(1,3-tpbd)], [(Cu2Cl2(ClO4)(1,3-tpbd))Cl(Cu2Cl2(OH2)(1,3-tpbd))](ClO4)2, and [Cu2(OH2)2(S2O6)(1,3-tpbd)]S2O6, and the exchange-polarization mechanism was successfully demonstrated.     

A novel copper cobalt inorganometallic cluster. Synthesis,structure and bonding analysis of Cu(3)[mu(2)-(CCHCo(2)(CO)(6))](3)

The reaction of the organometallic carboxylic acid HOOCCCHCo(2)(CO)(6) with copper(II) methoxide leads to a new inorganometallic cluster; Cu(3)[mu(2)-(CCHCo(2)(CO)(6))](3). This cluster has a triangular core of copper(I) centers surrounded by three CCHCo(2)(CO)(6) fragments. The structure of the cluster has short Cu-Cu and Cu-Co distances (average 2.500 and 2.540 A, respectively). DFT calculations provide a rationalization of the peculiar bonding in this cluster.     

Resonance raman investigation of equatorial ligand donor effects on the Cu(2)O(2)(2+) core in end-on and side-on mu-peroxo-dicopper(II) and bis-mu-oxo-dicopper(III) complexes

The effect of endogenous donor strength on Cu(2)O(2) bonds was studied by electronically perturbing [[(R-TMPA)Cu(II)]](2)(O(2))](2+) and [[(R-MePY2)Cu](2)(O(2))](2+) (R = H, MeO, Me(2)N), which form the end-on mu-1,2 bound peroxide and an equilibrium mixture of side-on peroxo-dicopper(II) and bis-mu-oxo-dicopper(III) isomers, respectively. For [[(R-TMPA)Cu(II)](2)(O(2))](2+), nu(O-O) shifts from 827 to 822 to 812 cm(-1) and nu(Cu)(-)(O(sym)) shifts from 561 to 557 to 551 cm(-1), respectively, as R- varies from H to MeO to Me(2)N. Thus, increasing the N-donor strength to the copper decreases peroxide pi(sigma) donation to the copper, weakening the Cu-O and O-O bonds. A decrease in nu(Cu-O) of the bis-mu-oxo-dicopper(III) complex was also observed with increasing N-donor strength for the R-MePY2 ligand system. However, no change was observed for nu(O-O) of the side-on peroxo. This is attributed to a reduced charge donation from the peroxide pi(sigma) orbital with increased N-donor strength, which increases the negative charge on the peroxide and adversely affects the back-bonding from the Cu to the peroxide sigma orbital. However, an increase in the bis-mu-oxo-dicopper(III) isomer relative to side-on peroxo-dicopper(II) species is observed for R-MePY2 with R = H < MeO < Me(2)N. This effect is attributed to the thermodynamic stabilization of the bis-mu-oxo-dicopper(III) isomer relative to the side-on peroxo-dicopper(II) isomer by strong donor ligands. Thus, the side-on peroxo-dicopper(II)/bis-mu-oxo-dicopper(III) equilibrium can be controlled by electronic as well as steric effects.     

New oxamato-bridged trinuclear Cu(II)-Cu(II)-Cu(II) complexes with hydrogen-bond supramolecular structures: synthesis and magneto-structural studies

Three oxamato-bridged copper(II) complexes of formula [(Cu(H(2)O)(tmen)Cu(tmen))(mu-Cu(H(2)O)(Me(2)pba))](n)((PF(6))(2))(n).2nH(2)O (1), [(Cu(H(2)O)(tmen)Cu(NCS)(tmen))(mu-Cu(H(2)O)(Me(2)pba))](2)(ClO(4))(2).4H(2)O (2), and [(Cu(H(2)O)(tmen)Cu(NCS)(tmen))(mu-Cu(H(2)O)(Me(2)pba))](2)(PF(6))(2).4H(2)O (3), where Me(2)pba = 2,2-dimethyl-1,3-propylenebis(oxamato) and tmen = N,N,N',N'-tetramethylethylenediamine, have been synthesized and characterized. Their crystal structures were solved. Complex 1 crystallizes in the monoclinic system, space group P2(1), with a = 15.8364(3) A, b =8.4592(2) A, c = 15.952 A, beta = 101.9070(10) degrees, and Z = 2. Complex 2 crystallizes in the monoclinic system, space group P2(1)/c, with a = 6.69530(10) A, b = 18.2441(3) A, c = 31.6127(5) A, beta = 90.1230(10) degrees, and Z = 4. Complex 3 crystallizes in the monoclinic system, space group P2(1)/c, with a = 6.68970(10) A, b = 18.150 A, c = 32.1949(4) A, beta = 90.0820(10) degrees, and Z = 4. The three complexes have a central core in common: a trinuclear Cu(II) complex with the two terminal Cu(II) ions blocked by N,N,N',N'-tetramethylethylenediamine. The structure of complex 1 consists of trinuclear cationic entities connected by hydrogen bonds to produce a supramolecular one-dimensional array. The structure of complexes 2 and 3 consist of trinuclear cationic entities linked by pairs by hydrogen bonds between the water molecule of the central Cu(II) and one oxygen atom of the oxamato ligand of the neighboring entity, forming a hexanuclear complex. The magnetic properties of the three complexes were studied by susceptibility vs temperature measurement. For complexes 1-3 the fit was made by the irreducible tensor operator (ITO). The values obtained were J(1) = -386.48 cm(-1) and J(2) = 1.94 cm(-1) for 1, J(1) = -125.77 cm(-1) and J(2) = 0.85 cm(-1) for 2, and J(1) = -135.50 cm(-1) and J(2) = 0.94 cm(-1) for 3. In complex 1, the coordination polyhedron of the terminal Cu(II) atoms can be considered as square pyramidal; the apical positions are filled by the oxygen atom from a water molecule in the former and a F atom of the hexafluorophosphate anion in the latter showing a quasi-planar [Cu(CuMe(2)pba)Cu] network. For complexes 2 and 3, the square pyramidal environment of the terminal Cu(II) ions was strongly modified. To our knowledge, this is the first time that the longest distance (apical) in complexes with oxamato derivatives and bidentate amines as blocking ligands has been reported in one of the oxamato arms. The great difference in J(1) values between 1 and the other two complexes is interpreted as an orbital reversal of the magnetic orbitals of the terminal Cu(II) ions in 2 and 3.     

Metal complexes formed by metal-assisted solvolysis of di-pyridylketone azine: structures and magnetic properties

A series of metal complexes were achieved from the metal-assisted solvolysis reaction of di-pyridylketone azine (dpka). The tetranuclear nickel cluster , [Ni(2)[dpk(O)(OH)][dpk(O)(OCH(3))](N(3))(2)](2), is centrosymmetric with a central core described as an edge-shared triangle core. Neighboring Ni(II) ions are alternately bridged by (micro(2)-N(3), micro(3)-O) and (micro(2)-O, micro(3)-O) double bridges. Complex , [Cu(4)[dpk(O)(OCH(3))](4)(N(3))(2)](CuCl(2))(2) contains a tetranuclear cluster and two identical [CuCl(2)]M(-) anions. The tetranuclear structure has two crystallographically imposed twofold axes, in which the four copper ions are arranged to be rhombic shape. The neighboring copper(ii) ions along the lateral are bridged by single micro(2)-O from the ligand dpk(O)(OCH(3)) and the short diagonal copper ions are bridged by two symmetric end-on azides. In dinuclear Cu(ii) complex [Cu(2)[dpka(OCH(2)CH(3))]Cl(2)](ClO(4)) (3), the metal centers are coordinated in a planar configuration and bridged by a -N-N- bridge. It is also observed that the Cl atom coordinated to one Cu(II) center is also weakly coordinated to another inversion related Cu(II) to generate a centrosymmetric dimer. The metal centers in one-dimensional polymeric Cu(ii) complex [Cu(2)[dpka(OCH(3))](N(3))(2)(ClO(4))](n) (4), however, are bridged by a -N-N- bridge and an end-to-end azide bridge, alternately. Magnetic susceptibility measurements indicate that shows ferromagnetic interaction within the tetranuclear cluster, and that displays moderately strong antiferromagnetic interaction (J = -56.7 cm(-1)) for the bis(micro-N(3)) bridge. For compound , it shows strong antiferromagnetic coupling (J = -286 cm(-1)) between the intradinuclear Cu(II) ions mediated by the single N-N bridge and negligible magnetic interactions between the adjacent dinuclear Cu(II) ions mediated by the single end-to-end azide bridge. The mechanism of the metal-assisted solvolysis reaction was also discussed.     

The solution structure of [Cu(aq)]2+ and its implications for rack-induced bonding in blue copper protein active sites

The structure of [Cu(aq)]2+ has been investigated by using full multiple-scattering theoretical (MXAN) analysis of the copper K-edge X-ray absorption (XAS) spectrum and density functional theory (DFT) to test both ideal Td and square-planar four-coordinate, five-coordinate square-pyramidal, and six-coordinate octahedral [Cu(aq)]2+ models. The best fit was an elongated five-coordinate square pyramid with four Cu-O(eq) bonds (2 x 1.98 +/- 0.03 A and 2 x 1.95 +/- 0.03 A) and a long Cu-O(ax) bond (2.35 +/- 0.05 A). The four equatorial ligands were D2d-distorted from the mean equatorial plane by +/-(17 +/- 4) degrees, so that the overall symmetry of [Cu(H2O)5]2+ is C2v. The four-coordinate MXAN fit was nearly as good, but the water ligands (4 x 1.96 +/- 0.02 A) migrated +/-(13 +/- 4) degrees from the mean equatorial plane, making the [Cu(H2O)4]2+ model again D2d-distorted. Spectroscopically calibrated DFT calculations were carried out on the C2v elongate square-pyramidal and D2d-distorted four-coordinate MXAN copper models, providing comparative electronic structures of the experimentally observed geometries. These calculations showed 0.85e spin on Cu(II) and 0.03e electron spin on each of the four equatorial water oxygens. All covalent bonding was restricted to the equatorial plane. In the square-pyramidal model, the electrostatic Cu-O(ax) bond was worth only 96.8 kJ mol(-1), compared to 304.6 kJ mol(-1) for each Cu-O(eq) bond. Both MXAN and DFT showed the potential well of the axial bond to be broad and flat, allowing large low-energy excursions. The irregular geometry and D2d-distorted equatorial ligand set sustained by unconstrained [Cu(H2O)5]2+ warrants caution in drawing conclusions regarding structural preferences from small molecule crystal structures and raises questions about the site-structural basis of the rack-induced bonding hypothesis of blue copper proteins. Further, previously neglected protein folding thermodynamic consequences of the rack-bonding hypothesis indicate an experimental disconfirmation.     

Highly luminescent octanuclear Au(I)-Cu(I) clusters adopting two structural motifs: the effect of aliphatic alkynyl ligands

Reactions of the homoleptic (AuC(2)R)(n) precursors with stoichiometric amount of diphosphine ligand PPh(2)C(6)H(4)PPh(2) (P^P) and Cu(+) ions lead to an assembly of a new family of bimetallic clusters [Au(6)Cu(2)(C(2)R)(6)(P^P)(2)](2+) (type I; R=9-fluorenolyl (1), diphenylmethanolyl (2), 2,6-dimethyl-4-heptanolyl (3), 1-cyclohexanolyl (4), Cy (5), tBu (6)). In the case of R=1-cyclohexanolyl, a structurally different complex [Au(6)Cu(2)(C(2)C(6)H(11)O)(6)(P^P)(3)](2+) (7, type II) could be obtained by treatment of 4 with one equivalent of the diphosphine, while for R=isopropanolyl only the latter type of cluster [Au(6)Cu(2)(C(2)C(3)H(7)O)(6)(P^P)(3)](2+) (8) was detected. Steric bulkiness of the alkynyl ligands and O···H-O hydrogen bonding are suggested to play an important role in stabilizing the type I and type II cluster structural motif, respectively. All the complexes exhibit intense photoluminescence in solution with emission parameters that depending on the geometrical arrangement of the octanuclear metal core. The clusters 1-4 and 6 show single emission band in a blue region (469-488 nm) with maximum quantum yield of 94% (4), while structurally different 7 and 8 emit yellow-orange (590 nm) with unity quantum efficiency. The theoretical DFT calculations of the electronic structures have been carried out to demonstrate that the metal-centered triplet emission within the heterometallic core plays a key role for the observed phosphorescence.     

Saccharinate as a versatile polyfunctional ligand. Four distinct coordination modes, misdirected valence, and a dominant aggregate structure from a single reaction system

The reaction system consisting of copper, saccharinate, and the auxiliary ligands H(2)O, PPh(3), and NH(3) produces a sequence of compounds in which saccharinate is coordinated to copper in four distinct manners. The complex trans-[Cu(sacch)(2)(H(2)O)(4)] (2) (produced by thermal dehydration of trans-[Cu(sacch)(2)(H(2)O)(4)].2H(2)O (1)) reacts with triphenylphosphine in CH(2)Cl(2) to produce any or all of three Cu(I) complexes, depending upon conditions. The three Cu(I) compounds are Cu(sacch)(PPh(3))(3) (3), in which saccharinate binds to copper through the carbonyl group of the ligand, Cu(sacch)(PPh(3))(2) (4), in which sacch binds to Cu through its charge-bearing nitrogen atom; and [Cu(sacch)(PPh(3))](2) (5), a dinuclear complex in which saccharinate bridges two Cu centers through its imidate nitrogen and carbonyl oxygen atoms. Complexes 3-5 can be isolated individually, although in solution they exist in a complex equilibrium which has been examined by NMR spectroscopy. Each of the three Cu(I) products reacts with NH(3) in CH(2)Cl(2) solution to produce trans-[Cu(sacch)(2)(NH(3))(4)] (6), an unstable Cu(II) complex that exhibits misdirected valence at the Cu-N(sacch) bond. Complex 6 evolves spontaneously to [Cu(sacch)(NH(3))(4)](sacch).H(2)O (7), which in the solid state is dominated by a supramolecular aggregate of two formula units, linked by hydrogen bonding in which the water molecule plays a central role. Alternative pathways exist to several of the products. The X-ray crystal structure analyses of 3-7 are reported and establish the coordination modes of saccharinate, the misdirected valence in 6, and the supramolecular aggregation in 7. The structure analysis of 7 by single-crystal neutron diffraction is reported and together with the previously reported neutron structure analysis of 1 establishes the substitution of the auxiliary ligand H(2)O by NH(3) in the Cu(II) products.