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1.
Different from the case of the benzene dimer, the differences between the interaction energies are always less than 0.50 kcal/mol for face‐to‐face eclipsed, face‐to‐face staggered, and parallel‐displaced configurations of all investigated complexes C6H6···C6X6 (X = F, Cl, Br, and I). Hence, it is a great challenge for quantum chemists to accurately calculate the interaction energies for the three configurations of the complexes C6H6···C6X6. This work demonstrates that results obtained with the PBE0 density functional combined with the D3 dispersion correction (PBE0‐D3) and the basis set def2‐TZVPP are in excellent agreement with the estimates of the coupled‐cluster singles, doubles, and perturbative triples [CCSD(T)] complete basis set (CBS) limit. The other finding in this study is that, in comparison with the gold‐standard CCSD(T)/CBS benchmark, the spin‐component scaled (SCS) zeroth‐order symmetry‐adapted perturbation theory (SAPT0), when paired with the basis set aug‐cc‐pVDZ, performs also very well, and its performance is even better than that of the PBE0‐D3/def2‐TZVPP method or the conventional SAPT/aug‐cc‐pVQZ method. The findings of this study are very significant because both PBE0‐D3/def2‐TZVPP and SCS‐SAPT0/aug‐cc‐pVDZ can deal with the systems with more than 200 atoms.  相似文献   

2.
The structures of five metal complexes containing the 4‐oxo‐4H‐pyran‐2,6‐dicarboxylate dianion illustrate the remarkable coordinating versatility of this ligand and the great structural diversity of its complexes. In tetraaquaberyllium 4‐oxo‐4H‐pyran‐2,6‐dicarboxylate, [Be(H2O)4](C7H2O6), (I), the ions are linked by eight independent O—H...O hydrogen bonds to form a three‐dimensional hydrogen‐bonded framework structure. Each of the ions in hydrazinium(2+) diaqua(4‐oxo‐4H‐pyran‐2,6‐dicarboxylato)calcate, (N2H6)[Ca(C7H2O6)2(H2O)2], (II), lies on a twofold rotation axis in the space group P2/c; the anions form hydrogen‐bonded sheets which are linked into a three‐dimensional framework by the cations. In bis(μ‐4‐oxo‐4H‐pyran‐2,6‐dicarboxylato)bis[tetraaquamanganese(II)] tetrahydrate, [Mn2(C7H2O6)2(H2O)8]·4H2O, (III), the metal ions and the organic ligands form a cyclic centrosymmetric Mn2(C7H2O6)2 unit, and these units are linked into a complex three‐dimensional framework structure containing 12 independent O—H...O hydrogen bonds. There are two independent CuII ions in tetraaqua(4‐oxo‐4H‐pyran‐2,6‐dicarboxylato)copper(II), [Cu(C7H2O6)(H2O)4], (IV), and both lie on centres of inversion in the space group P; the metal ions and the organic ligands form a one‐dimensional coordination polymer, and the polymer chains are linked into a three‐dimensional framework containing eight independent O—H...O hydrogen bonds. Diaqua(4‐oxo‐4H‐pyran‐2,6‐dicarboxylato)cadmium monohydrate, [Cd(C7H2O6)(H2O)2]·H2O, (V), forms a three‐dimensional coordination polymer in which the organic ligand is coordinated to four different Cd sites, and this polymer is interwoven with a complex three‐dimensional framework built from O—H...O hydrogen bonds.  相似文献   

3.
The nature of interactions of thiophene with various hydrides (Y) (Y = HF, HCl, H2O, H2S, NH3, PH3) is investigated using ab initio calculations. In contrast with the previous results on similar furan complexes, only the π-type is observed for the thiophene complexes. Variations in complexes geometry can be accounted for by the differences in the electrostatic potential on the aromatic ring. To further study the nature of the intermolecular interactions, an SAPT (the symmetry-adapted perturbation theory) energy decomposition analysis was carried out and the results indicate that the dispersion and electrostatic interactions dominate the thiophene complexes.  相似文献   

4.
By counterpoise‐corrected optimization method, the interactions of BrCl with the first‐row hydrides (HF, H2O, NH3) have been investigated at the MP2/6–311++G(3d,3p) level. To understand that the X? Br‐type (X = F, O, N) structure is more stable than the corresponding hydrogen‐bonded structure in these complexes, the electronic properties were also investigated. Symmetry‐adapted perturbation theory (SAPT) analysis has been carried out to understand the nature of the weak hydrogen bond and X? Br‐type interactions. On the other hand, for the weak hydrogen‐bonded complexes and the X? Br‐type complexes charges transfer is well correlated with the total induction energies. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2007  相似文献   

5.
The π–π interactions between CO2 and three aromatic molecules, namely benzene (C6H6), pyridine (C5H5N), and pyrrole (C4H5N), which represent common functional groups in metal‐organic/zeoliticimidazolate framework materials, were characterized using high‐level ab initio methods. The coupled‐cluster with single and double excitations and perturbative treatment of triple excitations (CCSD(T)) method with a complete basis set (CBS) was used to calibrate Hartree–Fock, density functional theory, and second‐order M?ller–Plesset (MP2) with resolution of the identity approximation calculations. Results at the MP2/def2‐QZVPP level showed the smallest deviations (only about 1 kJ/mol) compared with those at the CCSD(T)/CBS level of theory. The strength of π–π binding energies (BEs) followed the order C4H5N > C6H6 ~ C5H5N and was roughly correlated with the aromaticity and the charge transfer between CO2 and aromatic molecule in clusters. Compared with hydrogen‐bond or electron donor–acceptor interactions observed during BE calculations at the MP2/def2‐QZVPP level of theory, π–π interactions significantly contribute to the total interactions between CO2 and aromatic molecules. © 2013 Wiley Periodicals, Inc.  相似文献   

6.
Metal Salts of Benzene‐1,2‐di(sulfonyl)amine. 4. Hydrophobically Wrapped Two‐Dimensional Polymers: Crystal Structures of the Isostructural Metal Complexes [M{C6H4(SO2)2N}(H2O)] (M = K, Rb) and of the Structurally Related Ammonium Salt [(NH4){C6H4(SO2)2N}(H2O)] The previously unreported compounds KZ · H2O ( 1 ), RbZ · H2O ( 2 ) and NH4Z · H2O ( 3 ), where Z is Ndeprotonated ortho‐benzenedisulfonimide, are examples of layered inorgano‐organic solids, in which the inorganic component is comprised of metal or ammonium cations, N(SO2)2 groups and water molecules and the outer regions are formed by the planar benzo rings of the anions. The metal complexes 1 and 2 were found to be strictly isostructural, whereas 3 is structurally related to them by a non‐crystallographic mirror plane ( 1 – 3 : monoclinic, space group P21/c, Z = 4; single crystal X‐ray diffraction at low temperatures). In each structure, the five‐membered 1,3,2‐dithiazolide heterocycle possesses an envelope conformation, the N atom lying about 40 pm outside the mean plane of the S–C–C–S moiety. The metal complexes feature two‐dimensional coordination networks interwoven with O–H…O hydrogen bonds originating from the water molecules. The metal centres adopt an irregular nonacoordination formed by five sulfonyl O atoms, two N atoms and two μ2‐bridging water molecules; each M+ is connected to four different anions. When NH4+ is substituted for M+, the metal–ligand bonds are replaced by N+–H…O hydrogen bonds, but the general topology of the lamella is not affected. In the three structures, the lipophilic benzo groups protrude obliquely from the surfaces of the polar lamellae and display marked interlocking between adjacent layers.  相似文献   

7.
Acrylamide complexes of metal nitrates: [M(O‐OC(NH2)CHCH2)n(H2O)m][NO3]2 (M = Co( 1 ), Ni( 2 ) (n = 6 and m = 0) and Zn( 3 ) (n = 4 and m = 2)) have been determined by using single crystal X‐ray diffraction analysis. All complexes crystallize in the triclinic space group . The structures of 1 and 2 represent octahedral species [M(AAm)6]2+ (AAm = O‐OC(NH2)CHCH2 and M = Co or Ni) and uncoordinated nitrate ions. The structure of 3 involves the octahedral cation [Zn(AAm)4(H2O)2]2+ in which the Zn2+ environment includes oxygen atoms of four acrylamide and two water molecules that are stabilized using ionic nitrate ions. The observations of the solid‐state IR spectroscopic vibrational frequencies of these acrylamide complexes are in agreement with the crystal structures.  相似文献   

8.
The gas phase reactions of metal ions (Al+, Cu+) with amine molecules [CH3NH2=MA, (CH3)2NH=DMA] were investigated using a laser ablation‐molecular beam method. The directly associated product complex ions,Al+‐MA and Al+‐DMA, and the dehydrogenation product ions, Cu+(CH2NH) and Cu+(C2H5N), as well as hydrated ion Cu+(NC2H5·H2O), have been obtained and recorded from the reactions of the metal ions and organic amine molecules, and density functional theory (B3LYP) calculations have been performed to reveal the optimized geometry, energetics, and reaction mechanism of the title reactions with basis set 6‐311+G(d,p) adopted.  相似文献   

9.
Two supramolecular complexes [Zn(tacd)2](C6H8O4)·6H2O(1) and [Cu(tacd)2]Cl2·4H2O(2) were synthesized and characterized by elemental analysis, IR spectra, TGA and single-crystal X-ray diffraction analysis. The crystal structure showed that the metal ions in complexes 1 and 2 had similar coordination circumstance. But for the complex 2, it formed a novel two-dimensional supramolecular network with 12-membered rings and four-membered rings via hydrogen bond interaction. The thermal gravimetric analyses indicated that the two complexes had similar steps of weight-loss. On the basis of experiment, the two complexes were calculated by DFT-B3LYP/6-31G(d) in Gaussian 03. The results of calculation are in good agreement with the experiment.  相似文献   

10.
Water‐soluble alkynylplatinum(II) terpyridine complexes appended with guanidinium moieties, [Pt(tpy)(C?C?Ar)][OTf]2 (tpy=terpyridine; OTf=trifluoromethanesulfonate; Ar=C6H4‐{NHC(?NH2+)(NH2)}‐4 ( 1 ), C6H4‐{CH2NHC(?NH2+)(NH2)}‐4 ( 2 )), and [Pt(tBu3tpy)(C?CC6H4‐{NHC(?NH2+)(NH2)}‐4)][OTf]2 ( 3 ; tBu3tpy=4,4′,4′′‐tri‐tert‐butyl‐2,2′:6′,2′′‐terpyridine), have been synthesized and characterized. The photophysical properties of the complexes have been studied. Based on the results of UV/Vis absorption, resonance light scattering, and dynamic light scattering experiments, in aqueous buffer solutions complexes 1 and 2 undergo aggregation in the presence of citrate through strong and specific electrostatic and hydrogen‐bonding interactions with citrate. The emergence of a triplet metal–metal‐to‐ligand charge transfer (3MMLCT) emission in the near‐infrared (NIR) region brought on by the induced self‐assembly of complex 1 has been demonstrated for proof‐of‐principle detection of citrate with good sensitivity and selectivity over other mono‐ and dicarboxylate substrates in the tricarboxylic acid (TCA) cycle as well as phosphate and lactate anions. Such a good selectivity toward citrate has been rationalized by the high charge density of citrate under physiological conditions and specific interactions between the guanidinium moiety on complex 1 and citrate. Extension of the work to citrate detection in fetal bovine serum and real‐time monitoring of the activity of citrate lyase by the NIR emission of complex 1 have also been demonstrated.  相似文献   

11.
The crystal structures of the title complexes, namely trans‐bis­(iso­quinoline‐3‐carboxyl­ato‐κ2N,O)­bis­(methanol‐κO)cobalt(II), [Co(C10H6NO2)2(CH3OH)2], and the corresponding nickel(II) and copper(II) complexes, [Ni(C10H6NO2)2(CH3OH)2] and [Cu(C10H6NO2)2(CH3OH)2], are isomorphous and contain metal ions at centres of inversion. The three compounds have the same distorted octahedral coordination geometry, and each metal ion is bonded by two quinoline N atoms, two carboxyl­ate O atoms and two methanol O atoms. Two iso­quinoline‐3‐carboxyl­ate ligands lie in trans positions, forming the equatorial plane, and the two methanol ligands occupy the axial positions. The complex mol­ecules are linked together by O—H⋯O hydrogen bonds between the methanol ligands and neighbouring carboxyl­ate groups.  相似文献   

12.
Single crystals of (1,3‐diamino‐5‐azaniumyl‐1,3,5‐trideoxy‐cis‐inositol‐κ3O2,O4,O6)(1,3,5‐triamino‐1,3,5‐trideoxy‐cis‐inositol‐κ3O2,O4,O6)lithium(I) diiodide dihydrate, [Li(C6H16N3O3)(C6H15N3O3)]I2·2H2O or [Li(Htaci)(taci)]I2·2H2O (taci is 1,3,5‐triamino‐1,3,5‐trideoxy‐cis‐inositol), (I), bis(1,3,5‐triamino‐1,3,5‐trideoxy‐cis‐inositol‐κ3O2,O4,O6)sodium(I) iodide, [Na(C6H15N3O3)2]I or [Na(taci)2]I, (II), and bis(1,3,5‐triamino‐1,3,5‐trideoxy‐cis‐inositol‐κ3O2,O4,O6)potassium(I) iodide, [K(C6H15N3O3)2]I or [K(taci)2]I, (III), were grown by diffusion of MeOH into aqueous solutions of the complexes. The structures of the Na and K complexes are isotypic. In all three complexes, the taci ligands adopt a chair conformation with axial hydroxy groups, and the metal cations exhibit exclusive O‐atom coordination. The six O atoms of the resulting MO6 unit define a centrosymmetric trigonal antiprism with approximate D3d symmetry. The interligand O...O distances increase significantly in the order Li < Na < K. The structure of (I) exhibits a complex three‐dimensional network of R—NH2—H...NH2R, R—O—H...NH2R and R—O—H...O(H)—H...NH2R hydrogen bonds. The structures of the Na and K complexes consist of a stack of layers, in which each taci ligand is bonded to three neighbours via pairwise O—H...NH2 interactions between vicinal HO—CH—CH—NH2 groups.  相似文献   

13.
N-Unsubstituted azoles (1,2,4-triazole, 3-amino-1,2,4-triazole) and 5-R-tetrazoles (R = H, CH3, C2H5, C4H9, CH = CH2, C6H5, p-CH3C6H4, NH2) form water-soluble polymeric complexes in systems containing certain transition metal salts. The data obtained and the results of MP2/6-31G* * calculations of the electronic structures of 5-R-tetrazolate anions show that the ability of azoles for formation of polymeric complexes with transition metal ions is mostly determined by the acid-base properties of azoles. The geometric structure of a polymeric chain with the Co2+ ion having the coordination number 6 and the 5-methyltetrazolate anion being a bridging ligand was examined at the STO-3G level. It was shown that the coordination by the 2- and 3-nitrogen atoms of the tetrazole ring is most favored by energy.  相似文献   

14.
The complexes (NH4)2[MoO2(C2H2O3)2]·H2O, (NH4)2[MoO2(C8H6O3)2] and (NH4)2[MoO3(C4H4O6)]·H2O were prepared by reaction of MoO3 with glycolic, mandelic and tartaric acids, respectively. The complexes were characterized by elemental and thermal analysis, IR spectroscopy and X-ray diffraction. Crystals of the glycolate and tartarate complexes are orthorhombic and the mandelate complex is monoclinic. Elemental and thermal analysis data showed that the glycolate and tartarate complexes are monohydrated. Hydration water is not present in the structure of the mandelate complex. IR spectra showed COO? is involved in coordination as well as the oxygen atom of the deprotonated hydroxyl group of the α-carbon. The glycolate molybdenum complexes with general formula M2[MoO2(C2H2O3)2nH2O, where M is an alkali metal and n?=?1 or ½, were also prepared and characterized. Aqueous solutions of the glycolate complex become blue and mandelate and tartarate complexes change to yellow or brown when exposed to UV-radiation.  相似文献   

15.
Four new monomeric Pd (II) complexes with formulas [Pd(C,N)‐(2′‐NH2C6H4)C6H4 (N3)(L)] ( A ), ( B ) and [Pd(C,N)‐C6H4CH2NH(C4H9)(N3)(L)] ( C ), ( D ), [L = isonicotinamide for ( A ) and ( C ), L = 4‐N,N‐dimethylaminopyridine for ( B ) and ( D )] have been synthesized using four initial dimers [Pd2{(C,N)‐(2′‐NH2C6H4)C6H4}2(μ‐OAc)2] ( 1 ), [Pd2{(C,N)‐ (2′‐NH2C6H4)C6H4}2(μ‐N3)2] ( 3 ) for A and C , and [Pd2{(C,N)‐C6H4CH2NH(C4H9)}2(μ‐OAc)2] ( 2 ) and [Pd2{(C,N)‐C6H4CH2NH(C4H9)}2(μ‐N3)2] ( 4 ) for B and D . Then synthesized complexes have been characterized by Fourier transform‐infrared, NMR spectroscopy and thermal gravimetric‐differential thermal analysis. Furthermore, UV–Vis spectroscopy, fluorescence spectroscopy, circular dichroism (CD) and helix melting temperature measurements have been employed to study the binding interaction of them with calf thymus‐deoxyribonucleic acid (DNA). The results reveal that all synthesized complexes can interact with DNA via groove‐binding mode. Bovine serum albumin (BSA)‐binding studies have been carried out using UV–Vis spectroscopy, emission titration and CD. However, competitive binding studies using warfarin, ibuprofen and digoxin on site markers demonstrated that the complexes bind to different sites on BSA. The results also indicated that the binding site was mainly located within site‐III for complex A , and site‐I for complexes B , C and D of BSA. In addition, molecular docking studies have been executed to determine the binding site of the DNA and BSA with complexes. Eventually, in vitro cytotoxicity of synthesized palladium complexes and cisplatin were carried out against human promyelocytic leukemia cancer (Hela) and breast cancer (MCF‐7) cell lines. Pursuant to the IC50 values, the cytotoxicity of complexes against MCF‐7 was more than Hela.  相似文献   

16.
The properties and structures of the tetranuclear dibutyltin complexes [Sn43‐O)2(C4H9n)8­{OOCC6H3(NH2)2‐3,4}4] (1), [Sn43‐O)2(C4H9n)8{OOCC6H3(NH2)2‐3,5}4] (2), [Sn43‐O)2(C4H9n)8­{OOC‐2‐C6H4N?NC6H4N(CH3)2‐4}4] (3) are described. Complex 3 adopts a structure with a tetranuclear Sn43‐O)2 core. All tin atoms are five‐coordinate and form bonds with three oxygen atoms and two butyl ligands. Two carboxylates are bridging and two are terminal ligands. IR and NMR spectra indicate that the same structure is adopted by complexes 1 and 2. The molecular and electronic structures of complex 1 of C i symmetry have been studied using the semi‐empirical PM3 formalism. The calculated structure and bond distances agree with X‐ray data. All complexes are effective antitumor agents. Copyright © 2002 John Wiley & Sons, Ltd.  相似文献   

17.
The reaction of the donor‐functionalised N,N‐bis(2‐{pyrid‐2‐yl}ethyl)hydroxylamine and [LnCp3] (Cp=cyclopentadiene) resulted in the formation of bis(cyclopentadienyl) hydroxylaminato rare‐earth metal complexes of the general constitution [Ln(C5H5)2{ON(C2H4o‐Py)2}] (Py= pyridyl) with Ln=Lu ( 1 ), Y ( 2 ), Ho ( 3 ), Sm ( 4 ), Nd ( 5 ), Pr ( 6 ), La ( 7 ). These compounds were characterised by elemental analysis, mass spectrometry, NMR spectroscopy (for compounds 1 , 2 , 4 and 7 ) and single‐crystal X‐ray diffraction experiments. The complexes exhibit three different aggregation modes and binding motifs in the solid state. The late rare‐earth metal atoms (Lu, Y, Ho and Sm) form monomeric complexes of the formula [Ln(C5H5)22‐ON(C2H4‐η1o‐Py)(C2H4o‐Py)}] ( 1 – 4 , respectively), in which one of the pyridyl nitrogen donor atoms is bonded to the metal atom in addition to the side‐on coordinating hydroxylaminato unit. The larger Nd3+ and Pr3+ ions in 5 and 6 make the hydroxylaminato unit capable of dimerising through the oxygen atoms. This leads to the dimeric complexes [(Ln(C5H5)2{μ‐η12‐ON(C2H4o‐Py)2})2] without metal–pyridine bonds. Compound 7 exhibits a dimeric coordination mode similar to the complexes 5 and 6 , but, in addition, two pyridyl functions coordinate to the lanthanum atoms leading to the [(La(C5H5)2{ON(C2H4o‐Py)}{μ‐η12‐ON(C2H4‐η1o‐Py)})2] complex. The aggregation trend is directly related to the size of the metal ions. The complexes with coordinative pyridine–metal bonds show highly dynamic behaviour in solution. The two pyridine nitrogen atoms rapidly change their coordination to the metal atom at ambient temperature. Variable‐temperature (VT) NMR experiments showed that this dynamic exchange can be frozen on the NMR timescale.  相似文献   

18.
《中国化学会会志》2017,64(11):1340-1346
In this investigation, we describe substituent effect on the dipole moment, ionization potential, electron affinity, structure, frontier orbitals energy, in the trans‐Cl(OC)(H3P)3W(≡C‐para‐C6H4X) (X = H, F, SiH3, CN, NO2, SiMe3, CMe3, NH2, NMe2) complexes using MPW1PW91 quantum chemical calculations. The nature of chemical bond between the [Cl(OC)(H3P)3W] and [C‐para‐C6H4X]+ fragments was illustrated with energy decomposition analysis (EDA). Percentage composition in terms of the defined groups of frontier orbitals for these complexes was inspected to investigate the character in metal–ligand bonds. Quantum theory of atoms in molecules (QTAIM) was used for illustration of metal–ligand bonds in these complexes.  相似文献   

19.
Complexations of crown ethers with alkali metal ions have been investigated extensively by FAB mass spectrometry over the past decade, but very little attention has been paid to reactions of crown ethers with other classes of metal ions such as alkaline earth metal ions, transition metal ions and aluminum ions. Although fast atom bombardment ionization mass spectrometry has proven to be a rapid and convenient method to determine the binding interactions of crown ethers with metal ions, problems in reliabilities for quantitative measurements of” binding strength for the host-guest complexes have been described in the literature. Thus, in this paper, applications of FAB/MS for investigating the complexation of crown ethers with various classes of metal ions is discussed. Extensive fragmentations for neutral losses such as C2H4O or C2H4 molecules from the host-guest complexes could be observed. The reason is attributed to the energetic bombardment processes of FAB occuring in the formation of these complexes. Complexes of cyclen with metal ions also show neutral losses of C2H4NH molecules leading to fragment ions. Transition metal ions usually form (Crown + MCl)+ type of ions, alkaline earth metal ions can form both (Crown + MCl)+ and (Crown + MOH)+ type of ions. But for aluminum ions, only (Crown + Al(OH)2)+ type of ions could he observed.  相似文献   

20.
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