Kinetic Parameters for Direct Atomic Substitution Reactions

Experimental data (the rate constants and activation energies) for seven reactions of direct substitution of one atom for another D + CH₃R CH₂DR + H, D + NH₃ DNH₂ + H, D + H₂O HOD + H, F + CH₃X CH₃F + X (X = F, Cl, Br, and I) involving atoms D and F and molecules C₂H₆, H₂O, NH₃, CH₃F, CH₃Cl, CH₃Br, and CH₃I are analyzed using the parabolic model of a bimolecular radical reaction. The activation energies for the thermally neutral analogs of these substitution reactions are calculated. Atomic substitution involving deuterium atoms has a lower activation energy of a thermally neutral reaction than radical abstraction or substitution.     

Error of Atomic Charges Derived from Electrostatic Potential

The purpose of this article is to show that CHELP, CHELPG, and Merz and Kollman undergo error for the charge on atoms of HCOO^– (H₂O) _n for n = 1 6. We also demonstrate that the CHELP, CHELPG, and Merz and Kollman show error for the tendency toward change in the charges on carbons for CH₃NH⁺ ₃ (CH₃)₂NH⁺ ₂ (CH₃)₃NH⁺ (CH₃)₄N⁺.     

Metal bioaccumulation by the freshwater algaScenedesmus quadricauda

Bioaccumulation of six metals (Cu²⁺, Cu⁺, Mo⁶⁺, Mn²⁺, V⁵⁺, Ni²⁺) and their combinations by algaScenedesmus quadricauda was determined by using radio nuclide X-ray fluorescence (RXFA). The metals were added into the cultivation medium in concentrations corresponding with EC₅₀ value for each metal. The obtained results indicate that Ni²⁺, Cu²⁺ and Cu⁺ were accumulated in high amounts (20%, 17.5% and 15.19%) the Mo⁶⁺ ion (<0.2%) was accumulated in the lowest amount. For metal-metal interactions in accumulation of metal ions by algaS. quadricauda three types of answers were determined: inhibition (MoCu²⁺, Ni, Mn, V; VNi, Mn; MnNi, Cu²⁺, Cu⁺; Cu⁺Ni; Cu²⁺Ni; NiMn, V), enhancement (VCu⁺; Cu²⁺Mn;Cu⁺V, Mn; MnV; NiCu²⁺, Cu⁺) and neutral effect (VMo; Cu²⁺Mo; Cu⁺Mo; MuMo; NiMo).     

Water-catalyzed isomerization of the glycine radical cation. From hydrogen-atom transfer to proton-transport catalysis

The isomerization reactions of the glycine radical cation, from [NH₂CH₂COOH]⁺, I, to [NH₃CHCOOH]⁺, II, or [NH₂CHC(OH)₂]⁺, III, in the presence of a water molecule have been studied theoretically. The water molecule reduces dramatically the energy barriers of the III and IIII tautomerizations owing to a change in the nature of the process. However, the role of the water molecule depends on the kind of isomerization, the catalytic effect being more important for the IIII reaction. As a consequence, the preferred mechanism for the interconversion of glycine radical cation I to the stablest isomer, III, is the direct one-step mechanism instead of the two step (III and IIIII) process found for isolated [NH₂CH₂COOH]⁺. When using ammonia as a solvent molecule, a spontaneous proton-transfer process from [NH₂CH₂COOH]⁺ to NH₃ is observed and so no tautomerization reactions take place. This behavior is the same as that observed in aqueous solution, as has been confirmed by continuum model calculations.Contribution to the Jacopo Tomasi Honorary Issue     

Kinetic parameters of the cyclization and decyclization reactions of nitrogen- and oxygen-containing radicals

The intersecting parabolas model is used to analyze experimental data for the following radical cyclization and decyclization reactions: RCH=CH(CH₂)_nN·R₁ cyclo-[NR₁CH(CH₂)_n]C·HR,R(CH₂)₂OOCH₂C·HR cyclo-[RCHOCH₂] + RCH₂CH₂O·, cyclo-[(CH₂)_nOOCHC· HR] cyclo-[RCHOCH](CH₂)_nO·, cyclo-[(CH₂)_nOC·RO] RC(O)O(CH₂) _n–1C·H₂, and cyclo-[(CH₂)_nCHO·] CH(O)(CH₂) _n–1C·H₂. The activation energy of the thermally neutral reaction (E _e,0) is calculated for each class of reactions. E _e,0 depends on the electronegativity of the heteroatom Y of the reaction center C C...Y, the force constants of the reacting bonds, and the strain energy of the ring formed. For the cyclization and decyclization of six-membered rings, the empirical relationship between the elongation of the reacting bonds in the transition state (r _e) and the difference in electronegativity (EA) between the C and Y atoms (Y = C, N, O) has the form r _e ×10₁₁, m = 3.83 – 0.0198(EA, kJ/mol).Translated from Kinetika i Kataliz, Vol. 46, No. 1, 2005, pp. 5–13.Original Russian Text Copyright © 2005 by Denisova, Denisov.     

The triterpene glycosides ofpatrinia intermedia roem et schult

Conclusions It has been established that patrinoside D₁ is the -D-glucopyranosido(13) -D-xylopyranosido(12) -L-rhamnosido(14)--D-xylopyranoside (13) of oleanolic acidKhimiya Prirodnykh Soedinenii, Vol. 5, No. 2, pp. 84–89, 1969     

Kinetik und Mechanismus der Diazotierung, 15. Mitt.: Kinetik der anorganischen Startreaktion der Diazotierung

Zusammenfassung Es werden die Geschwindigkeitskoeffizienten der Primärreaktion der Diazotierung, nämlich der Bildung des Nitrosoacidiumions aus salpetriger Säure und Hydroxoniumion: HNO₂+H₃O⁺H₂O·NO⁺+H₂O bei verschiedenen Temperaturen bestimmt. Die thermodynamischen Aktivierungsgrößen dieser Urreaktion werden daraus errechnet.Die Resultate werden aus der Kinetik der Diazotierung des Anilins in Nitritpufferlösungen und in schwach sauren ungepufferten Lösungen geschöpft, bei welchen nur die beiden anorganischen Urreaktionen HNO₂+H₃O+H₂O·NO⁺+H₂O H₂O·NO⁺+NO_2–N₂O₃+H₂O kinetisch in Erscheinung treten.Originalvortrag vonHermann Schmid beim XVII. Internat. Kongr. Reine u. Angew. Chem. (München, 2. Sept. 1959).     

Ab initio calculations of potential energy surface for reaction of nucleophilic addition of H− ion to methylacetylene

Within the framework of the Hartree-Fock-Roothaan Method, using double- basis sets 3-21++G and (6-31-H-G//3-21++G), the minimum energy paths (MEPs) have been calculated for reactions of nucleophilic addition of the hydride ion H^– to the methylacetylene molecule: CH₃-CCH+H^–[CH₃-CH=CH]^– (1) CH₃-CCH+H^–[CH₃-C=CH₂]^– (2). It has been established that the activation energy for reaction (2) is 7.02 kJ/mole lower than for reaction (1). An analysis has been made of the character of electron density distribution along the MEP of each reaction. It has been shown that distortion of geometry of the reactants plays an important role in intensifying the interaction of the frontier orbitals. The reasons for nonfulfillment of Markownikoff's rule for these reactions have been determined. The results from the calculations are compared with calculations reported in the literature for the related reaction of nucleophilic addition of the hydride ion H^– to the acetylene molecule: HCCH+H^–[CH₂=CH]^–.Translated from Teoreticheskaya i Éxperimental'naya Khimiya, Vol. 21, No. 3, pp. 303–309, May–June, 1985.     

Some peculiarities of metal exchange reactions in porphyrin and phthalocyanine complexes

Kinetics of metal exchange reaction Cd(II) Zn(II) and Cd(II) Cu(II) in Cd complexes with tetraphenylporphyrin in DMSO is studied. Reaction with Cu(II) nitrate occurs in both cases more vigorously as compared to that with Zn(II) nitrate. Conditions for metal exchange reactions are studied depending on the nature of metal porphyrinate, a salt (nitrates, acetates, and chlorides of Zn(II), Cu(II), and Co(II), and of organic solvent (DMSO, CH₃CN). It is shown that Zn(II) complexes with nonplanar porphyrins do not show metal exchange Zn(II) Cu(II) or Zn(II) Co(II) under mild conditions in DMSO and CH₃CN.Translated from Koordinatsionnaya Khimiya, Vol. 31, No. 2, 2005, pp. 104–109. Original Russian Text Copyright © 2005 by D. Berezin, Shukhto, Nikolskaya, B. Berezin.     

MO LCAO calculations and the electronic spectra of the anions of cyclopent-4-ene-1,3-diones and indane-1,3-diones

The Hückel approximation in MO LCAO is used to show that the anion system of cyclopent-4-ene-1,3-dione should have two ^* transitions: a weak one at long wavelengths, NV₁, and a strong one at short wavelengths, C=C(1,3)V₁. An ethylene, phenyl, or acyl group at position 2 gives rise to a new strong band, NC=C(2), Nbenz, or NC=O (2). A p-nitrophenyl group at position 2 gives rise to a strong NNO₂ band, which overlaps the weak NV₁ band, while the Nbenz band becomes weak and is virtually lost from the spectrum.     

The electronic spectrum of acrylonitrile

The vapor absorption spectrum of acrylonitrile CH₂CHCN has been measured in the vacuum ultraviolet region. In addition, an all-valence-electron molecular orbital calculation has been used to calculate the electronic structure and spectrum of the molecule. On the basis of the MO calculation, as well as a vibrational analysis of the observed spectrum, several electronic transitions are assigned. The lowest energy absorption band (2107Å, = 150) is assigned as an n ^* transition. Absorption bands at 2030Å (=1600), 1725Å ( = 2100), and 1570Å ( = 1920) are assigned as 0–0 bands associated with transitions that are, respectively, ^*,^*, and ^* in character.

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Zusammenfassung Das UV-Absorptionsspektrum von dampfförmigen Acrylnitril wurde gemessen und eine CNDO/2-Rechnung für die Elektronenstruktur durchgeführt. Auf dieser Basis konnten unter Zuhilfenahme der Analyse der Schwingungsstruktur im beobachteten Spektrum mehrere Banden zugeordnet werden: die 2107-Å-Bande ( = 150) einem n^*-Übergang, die drei Banden bei 2030Å ( = 1600), 1725Å ( = 2100) und 1570 Å ( = 1920)0-0-Übergängen von ^*-, ^*- bzw. ^*-Banden.

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Résumé Mesure du spectre d'absorption en phase vapeur de l'acrilonitrile CH₂CHCN dans la région de l'ultraviolet. Par ailleurs, la structure électronique et le spectre de la molécule ont été calculés à l'aide d'une méthode des orbitales moléculaires semi-empirique pour tous les électrons de valence. Sur cette base, ainsi que sur une analyse vibrationnelle du spectre expérimental, on procède à l'attribution de plusieurs transitions électroniques. La bande d'absorption de plus basse énergie (2107 Å, = 150) est attribuée à une transition n ^*. Les bandes d'absorption à 2030Å ( = 1600), 1275Å ( = 2100) et 1570Å ( = 1920) sont considérées comme des bandes 0 - 0 associées à des transitions ^*, ^* et ^* respectivement.

     

Ein einfacher Zugang zu (R)-γ-Amino-β-hydroxybuttersäure (GABOB) aus natürlichem (2S, 4R)-4-Hydroxyprolin

The oxidative decarboxylation sequence (1a 2a 3a 4a 5a) affording -aminobutanoic acid (5a) is adapted to the synthesis of its hydroxy derivative5b. A facile high yield conversion of (2S, 4R)-4-hydroxyproline-methylester-hydrochloride (7) to (R)-GABOB (5b) on a preparative scale is reported with the hydroxypyrrolidone8 as the intermediate.

     

Triterpene Glycosides of Fatsia japonica. IV. Structure of Glycosides D1 and D2 from Seeds

Seeds ofFatsia japonica(Araliaceae) afforded the known hederagenin 3-O--D-glucopyranosyl-(12)-O--L-arabinopyranoside and the new triterpene glycoside D ₂ , for which the structure hederagenin 3-O--D- galactopyranosyl-(12)-O--L-arabinopyranoside was proposed based on chemical methods and NMR spectroscopy     

Pressure effects on aminonaphthalene dye fluorescence in H2O and D2O

The pressure dependence of excited-state proton transfer equilibria has been examined for aqueous solutions of several substituted napthalene dyes, in particular 1-dimethylaminonaphthalene-5-sulfonic acid (DANS). The pressure-induced shift in equilibrium is characterized by volume changes spanning the range V ^*=–18 cm³ mole^–1 to V ^*=+4 cm³-mole^–1. A deuterium oxide solvent isotope effect is evident in the pressure response of DANS, leading to a 35% smaller V_* in D₂O relative to H₂O.     

The influence of solvation on the calculated activation energy for the reaction CH3F+F−

The influence of the solvent on the activation energy of the synchronous, concerted, narcissistic reaction: CH₃F + F^–¦CH₃F₂&#x00A6;^–FCH₃+F^–, has been investigated by means of CNDO/2 method. The reaction path has been fully followed in vacuo, and at a suitable point only, of reaction coordinate, in solution. The geometries of H₂O, F^–, CH₃F, and ¦CH₃F₂¦^–, in vacuo and in different hydrated cages, have been optimized.

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Zusammenfassung Der Einfluß des Lösungsmittels auf die Aktivierungsenergie der synchronverlaufenden Reaktionen CH₃F+F^–¦CH₃F₂¦FCH₃+ F^–, wurde mit der CNDO/2 Methode geprüft. Der Reaktions-Ablauf wurde in Vakuum vollkommen und in der Lösung an einem geeigneten Punkt der Reaktionskoordinate durchgeführt. Die Geometrien von H₂O, F^–, CH₃F, und ¦CH₃F₂¦^– im Vakuum und in verschiedenen hydrierten Käfigen wurden optimalisiert.

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Résumé L'influence du solvent sur l'énergie d'activation de la réaction synchronique, concertée, narcissistique: CH₃F+ F^–¦CH₃F₂¦^–FCH₃+F^– a été examinée par la méthode CNDO/2. On a suivie l'entier chemin de réaction in vacuo, alors qu'on a observé un seul point convenable de la coordonée de réaction en solution. On a optimize les geometries de H₂O, F^–, CH₃F, et ¦CH₃F₂¦^– in vacuo et en differentes cages hydratés.

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Financial aid from Italian Centro Nazionale delle Ricerche is gratefully acknowledged.     

Alkaloids ofRhinopetalum stenantherum. II. The structure of stenanthine and stenanthidine

From a methanolic extract of the epigeal part ofRhinopetalum stenantherum have been isolated -chaconine (I) and the new glucoalkaloids stenanthine with mp 262–264°C []_D 46.5°, C₄₅H₇₃NO₁₅ (II), and stenanthidine with mp 269–271°C, []_D –47.5°, C₃₉H₆₃NO₁₁ (III). On the basis of the facts that partial hydrolysis of the trioside (II) formed the biosides (I) and (III), and that on the hydrolysis of the latter the monoside -chaconine was found, it may be assumed that stenanthine has the structure of solanidine 3-0-{[0--D-glucosyl-(1 6)]-[0--L-rhamnosyl-(1 4)]-D-glucoside}, and stenanthidine that of solanidine 3-0-[0--D-glucosyl-(1 6)-D-glucoside].Institute of the Chemistry of Plant Substances, Academy of Sciences of the Uzbek SSR, Tashkent. Translated from Khimiya Prirodnykh Soedinenii, No. 3, pp. 349–356, May–June, 1981.     

A Nonempirical Quantum-Chemical Study and Natural Bond Orbital Analysis of C6H5XCY3 Species (X = SO or SO2, Y = H or F)

The potential functions of internal rotation about the C² _sp—S bonds for C₆H₅XCY₃ species (X = SO or SO₂, Y = H or F) have been obtained at the MP2 (full)/6-31+G(d) level of ab initio theory. It is found that the spatial structures with the plane of C² _sp—S—C³ _sp bonds, which is near perpendicular to the benzene ring plane, are the energy-favourable conformations. The values of the rotational barrier about the C² _sp—S bond are equal to (kJ/mole): 21.2 (C₆H₅SOCH₃), 29.0 (C₆H₅SOCF₃), 20.4 (C₆H₅SO₂CH₃), and 28.2 (C₆H₅SO₂CF₃). On the basis of the Natural Bond Orbital (NBO) analysis results, it has been revealed that the double S=O bond is a strongly polarized covalent -bond, whereas -bond electrons practically are localized on the oxygen atom. The S=O bond order for aromatic sulfoxides and sulphones is mainly caused by hyperconjugational interactions according to the LP(O) ^*(S—C_ipso) and LP(O) ^*(S—C _Y ) mechanisms. In sulphones there is also the additional mechanism of hyperconjugational interactions such as LP(O^{1 *}(S—O²) and LP(O²) ^*(S—O¹). With the replacement of one hydrogen atom on the —XCY₃ group, the charge loss of the unsubstituted benzene molecule increases: —SOCH₃ < —SO₂CH₃ < — SOCF₃ < —SO₂CF₃. The substitution of the —CH₃ group for the —CF₃ group weakly influences the charge value on the sulfur atom but effects the acceptor characteristics of the substituent to a greater extent than the variation of the sulfur atom coordination.     

Hypothetical transformation of Ca(OH)<Subscript>2</Subscript> into CaCO<Subscript>3</Subscript> in solid-state reactions of portland cement

Summary Previous study of the hydration and ageing products of two cement pastes created the basis for the postulate of the course of solid-state reactions between the portlandite Ca(OH)₂ and the CO₂ from air in the hydrated and air dry cement. XRD basal spacing d(001) of portlandite exceeded the nominal value and increased with ageing, with the wetting and drying procedure and with carbonate content of the paste, indicating that a part of OH^- ions was gradually substituted by CO₃^2- ions, which are about twice bigger. IR spectroscopy showed a considerable content of portlandite, of CO₃^2- of water and silicates. Also HCO₃^- H₂O and CO₂ in cavities between hexagonal rings and hexagonal hydrates were indicated. By MS (mass spectrometry) in vacuum the evaporation of sorbed water was detected at 100-120°C, of gel water at 350°C of portlandite water at 400°C and of high temperature water between 500 and 700°C, simultaneously with CO₂ escape. Slightly higher peak temperatures were found by the TG test either in air or in argon. From these results and from geometric considerations it is postulated that the solid-state reactions take place on ageing of the cement paste and on its heating: hexagonal portlanditecalcium carbonate hydroxy hydratecalcium carbonate hydratehexagonal vaterite and/or orthorhombic aragoniterhombohedral calcite The analysis of the standard files of the calcium carbonate hydroxy hydrates supports this postulate and indicates a gradual transformation.     

Thermodynamics of bolaform electrolytes. I. Heat capacities and enthalpies in H2O and D2O

The partial molal heats of solution at infinite dilution, H _s ^o , of bolaform salts [Et₃N(CH₂)_nNEt₃]Br₂ and [allyl₃N(CH₂)_nNallyl₃]Br₂, have been measured in H₂O and D₂O at 25°C using a solution calorimeter. The values of H _s ^o were endothermic for almost all of the compounds studied. Values of H _s ^o were obtained as a function of temperature for several homologs in H₂O and D₂O. Positive C _p ^o values obtained from least-squares analyses of the H _s ^o vs T data show an almost linear dependence on the number of methylene groups between the nitrogen centers. Whereas the enthalpy of transfer from H₂O to D₂O is small and endothermic, relatively large positive heat capacity of transfer data, increasing with increased hydrocarbon content of the salts, were observed. The ability of the bolaform cation to act as a model for cation-cation pairing in R₄NX systems is discussed.     

Structure of cucumarioside G1 — A new triterpene glycoside from the holothurianCucumaria fraudatrix

A new triterpene glycoside — cucamarioside G₁ — has been isolated from the Pacific Ocean holothurianCucumaria fraudatrix. On the basis of physicochemical characteristics and the results of chemical transformations, its structure has been established as 16-acetoxy-3-[O-(3-O-methyl--D-xylopyranosyl)-(1 3)-O--D-glucopyranosyl-(1 4)--D-quinovopyranosyl-(1 2)-(4-O-sulfato--D-xylopyranosyloxy)]-holosta-7,24-diene.Pacific Ocean Institute of Bioorganic Chemistry, Far Eastern Scientific Center, Academy of Sciences of the USSR, Vladivostok. Translated from Khimiya Prirodnykh Soedinenii, No. 2, pp. 244–248, March–April, 1985.