Vibrational spectroscopy and density functional theory calculations of poly‐D‐mannuronate and heteropolymeric fractions from sodium alginate

The tetrasaccharide of 1 → 4β‐D‐mannopyranuronate (MM) and the alternating tetrasaccharide of 1 → 4 b‐D‐mannopyranuronate and 1 → 4α‐L‐gulopyranuronate (MG) were analyzed based on density functional theory (DFT) by employing the Gaussian 03 W package. The molecular geometries were fully optimized by using the Becke's three‐parameter hybrid exchange functional combined with Lee–Yang–Parr correlation functional (B3LYP) and using a 6‐31G(d,p) basis set. The calculated IR spectrum of MM presents a band at 1093 cm⁻¹ for C C stretching vibration, which is in good agreement with the experimental observation (1096 cm⁻¹) for the polymannuronate fraction obtained by partial hydrolysis of sodium alginate extracted from the hybrid brown seaweed Lessonia–Macrocystis. The calculated value at 826 cm⁻¹for MM is in close agreement with the experimental value and confirms that this band is characteristic of polymannuronate blocks. Most of the bands in the IR spectrum are also present in the observed Raman spectrum of the polymannuronate fraction. The experimental IR spectrum of heteropolymeric fraction obtained by partial hydrolysis of sodium alginate shows absorbances similar to those calculated for the model tetrasaccharide (MG). Surface‐enhanced Raman scattering (SERS) allows differentiation between the homopolymeric and heteropolymeric fractions of sodium alginate. The SERS spectrum of the heteropolymeric fraction shows an enhanced signal at 731 cm⁻¹which is present in the calculated Raman spectrum of the tetrasaccharide MG at 729 cm⁻¹. This band is assigned to the ring‐breathing deformation of the β‐D‐mannopyranuronate and α‐L‐gulopyranuronate residues. Copyright © 2010 John Wiley & Sons, Ltd.     

Food additives characterization by infrared,Raman, and surface‐enhanced Raman spectroscopies

Fourier‐transform infrared (FT‐IR), Raman (RS), and surface‐enhanced Raman scattering (SERS) spectra of β‐hydroxy‐β‐methylobutanoic acid (HMB), L ‐carnitine, and N‐methylglycocyamine (creatine) have been measured. The SERS spectra have been taken from species adsorbed on a colloidal silver surface. The respective FT‐IR and RS band assignments (solid‐state samples) based on the literature data have been proposed. The strongest absorptions in the FT‐IR spectrum of creatine are observed at 1398, 1615, and 1699 cm⁻¹, which are due to ν_s(COOH) + ν(CN) + δ(CN), ρ_s(NH₂), and ν(C O) modes, respectively, whereas those of L ‐carnitine (at 1396/1586 cm⁻¹ and 1480 cm⁻¹) and HMB (at 1405/1555/1585 cm⁻¹ and 1437–1473 cm⁻¹) are associated with carboxyl and methyl/methylene group vibrations, respectively. On the other hand, the strongest bands in the RS spectrum of HMB observed at 748/1442/1462 cm⁻¹ and 1408 cm⁻¹ are due to methyl/methylene deformations and carboxyl group vibrations, respectively. The strongest Raman band of creatine at 831 cm⁻¹ (ρ_w(R NH₂)) is accompanied by two weaker bands at 1054 and 1397 cm⁻¹ due to ν(CN) + ν(R NH₂) and ν_s(COOH) + ν(CN) + δ(CN) modes, respectively. In the case of L ‐carnitine, its RS spectrum is dominated by bands at 772 and 1461 cm⁻¹ assigned to ρ_r(CH₂) and δ(CH₃), respectively. The analysis of the SERS spectra shows that HMB interacts with the silver surface mainly through the  COO⁻, hydroxyl, and  CH₂ groups, whereas L ‐carnitine binds to the surface via  COO⁻ and  N⁺(CH₃)₃ which is rarely enhanced at pH = 8.3. On the other hand, it seems that creatine binds weakly to the silver surface mainly by  NH₂, and C O from the  COO⁻ group. Copyright © 2006 John Wiley & Sons, Ltd.     

Synthesis and Raman spectroscopic characterisation of the oxalate mineral wheatleyite Na2Cu2+(C2O4)2·2H2O

The mineral wheatleyite has been synthesised and characterised by Raman spectroscopy complimented with infrared spectroscopy. Two Raman bands at 1434 and 1470 cm⁻¹ are assigned to the ν_{(C O)} stretching mode and implies two independent oxalate anions. Two intense Raman bands observed at 904 and 860 cm⁻¹ are assigned to the ν(C C) stretching mode and support the concept of two non‐equivalent oxalate units in the wheatleyite structure. Two strong bands observed at 565 and 585 cm⁻¹ are assigned to the symmetric CCO in plane bending modes. The Raman band at 387 cm⁻¹ is attributed to the CuO stretching vibration and the bands at 127 and 173 cm⁻¹ to OCuO bending vibrations. A comparison is made with Raman spectra of selected natural oxalate bearing minerals. Oxalates are markers or indicators of environmental events. Oxalates are readily determined by Raman spectroscopy. Thus, deterioration of works of art, biogeochemical cycles, plant metal complexation, the presence of pigments and minerals formed in caves can be analysed. Copyright © 2008 John Wiley & Sons, Ltd.     

A Raman spectroscopic study of the antimony mineral klebelsbergite Sb4O4(OH)2(SO4)

Many minerals based upon antimonite and antimonate anions remain to be studied. Most of the bands occur in the low wavenumber region, making the use of infrared spectroscopy difficult. This problem can be overcome by using Raman spectroscopy. The Raman spectra of the mineral klebelsbergite Sb₄O₄(OH)₂(SO₄) were studied and related to the structure of the mineral. The Raman band observed at 971 cm⁻¹ and a series of overlapping bands are observed at 1029, 1074, 1089, 1139 and 1142 cm⁻¹ are assigned to the SO₄²⁻ν₁ symmetric and ν₃ antisymmetric stretching modes, respectively. Two Raman bands are observed at 662 and 723 cm⁻¹, which are assigned to the Sb O ν₃ antisymmetric and ν₁ symmetric stretching modes, respectively. The intense Raman bands at 581, 604 and 611 cm⁻¹ are assigned to the ν₄ SO₄²⁻ bending modes. Two overlapping bands at 481 and 489 cm⁻¹ are assigned to the ν₂ SO₄²⁻ bending mode. Low‐intensity bands at 410, 435 and 446 cm⁻¹ may be attributed to O Sb O bending modes. The Raman band at 3435 cm⁻¹ is attributed to the O H stretching vibration of the OH units. Multiple Raman bands for both SO₄²⁻ and Sb O stretching vibrations support the concept of the non‐equivalence of these units in the klebelsbergite structure. It is proposed that the two sulfate anions are distorted to different extents in the klebelsbergite structure. Copyright © 2010 John Wiley & Sons, Ltd.     

Why the ΔνCH blue shift is larger in chloral than in dichloroacetyl chloride dimers?

Raman spectra of the Cl₃CCHO/CCl₄ and Cl₃CCHO/C₆D₁₂ binary systems were recorded as a function of the mole fraction. Features originating from self‐aggregates of chloral (trichloroethanal, trichloroacetaldehyde—TCAA) molecules were detected in different spectral regions. The most pronounced changes were observed in the vicinity of the ν(CO) and ν(C H) stretching vibration bands. Using two‐dimensional correlation spectroscopy (2D‐COS), evolving‐factor analysis (EFA) and multivariate curve resolution (MCR), dimer bands were identified, and their positions were determined. The ν(C H) stretching vibration band in dimers was blue‐shifted by nearly 18 cm⁻¹, whereas the ν(CO) dimer band was red‐shifted by more than 5 cm⁻¹. For these bands, the observed shifts were accompanied by an almost twofold change in the bandwidth, from approximately 19 and 6 cm⁻¹ for dilute solutions (x = 0.05) to 36.6 and 11.5 cm⁻¹, respectively, in pure TCAA. The formation of dimers was confirmed by multivariate analysis of the Raman spectra of chloral recorded as a function of temperature. Analogous analysis of dichloroacetyl chloride (DCAC) spectra gave an 8.9 cm⁻¹ blue shift for the ν(C H) vibration band and − 5.5/− 10.1 cm⁻¹ shifts for the ν(CO) stretching vibrations of the two conformers present. To facilitate the interpretation of experimental findings, the optimized geometries and vibrational wavenumbers of the Cl₃CCHO/HCl₂CCClO molecules and (Cl₃CCHO)₂/(HCl₂CCClO)₂ dimers were calculated at the B3LYP/6‐311 + + G(3df,3pd) level. Copyright © 2010 John Wiley & Sons, Ltd.     

Vibrational spectroscopic studies of the structure of di‐amino acid peptides. Part II: cyclo(L‐Asp‐L‐Asp) in the solid state and in aqueous solution

Solid‐state protonated and N,O‐deuterated Fourier transform infrared (IR) and Raman scattering spectra together with the protonated and deuterated Raman spectra in aqueous solution of the cyclic di‐amino acid peptide cyclo(L ‐Asp‐L ‐Asp) are reported. Vibrational band assignments have been made on the basis of comparisons with previously cited literature values for diketopiperazine (DKP) derivatives and normal coordinate analyses for both the protonated and deuterated species based upon DFT calculations at the B3‐LYP/cc‐pVDZ level of the isolated molecule in the gas phase. The calculated minimum energy structure for cyclo(L ‐Asp‐L ‐Asp), assuming C₂ symmetry, predicts a boat conformation for the DKP ring with both the two L ‐aspartyl side chains being folded slightly above the ring. The CO stretching vibrations have been assigned for the side‐chain carboxylic acid group (e.g. at 1693 and 1670 cm⁻¹ in the Raman spectrum) and the cis amide I bands (e.g. at 1660 cm⁻¹ in the Raman spectrum). The presence of two bands for the carboxylic acid CO stretching modes in the solid‐state Raman spectrum can be accounted for by factor group splitting of the two nonequivalent molecules in a crystallographic unit cell. The cis amide II band is observed at 1489 cm⁻¹ in the solid‐state Raman spectrum, which is in agreement with results for cyclic di‐amino acid peptide molecules examined previously in the solid state, where the DKP ring adopts a boat conformation. Additionally, it also appears that as the molecular mass of the substituent on the C^α atom is increased, the amide II band wavenumber decreases to below 1500 cm⁻¹; this may be a consequence of increased strain on the DKP ring. The cis amide II Raman band is characterized by its relatively small deuterium shift (29 cm⁻¹), which indicates that this band has a smaller N H bending contribution than the trans amide II vibrational band observed for linear peptides. Copyright © 2009 John Wiley & Sons, Ltd.     

Effect of an aliphatic spacer group on the adsorption mechanism on the colloidal silver surface of L‐proline phosphonodipeptides

A comparative study of molecular structures of five L ‐proline (L ‐Pro) phosphonodipeptides: L ‐Pro‐NH‐C(Me,Me)‐PO₃H₂ (P1), L ‐Pro‐NH‐C(Me,iPr)‐PO₃H₂ (P2), L ‐Pro‐L ‐NH‐CH(iBu)‐PO₃H₂ (P3), L ‐Pro‐L ‐NH‐CH(PA)‐PO₃H₂ (P4) and L ‐Pro‐L ‐NH‐CH(BA)‐PO₃H₂ (P5) has been carried out using Raman and absorption infrared techniques of molecular spectroscopy. The interpretation of the obtained spectra has been supported by density functional theory calculations (DFT) at the B3LYP; 6–31 + + G** level using Gaussian 2003 software. The surface‐enhanced Raman scattering (SERS) on Ag‐sol in aqueous solutions of these phosphonopeptides has also been investigated. The surface geometry of these molecules on a silver colloidal surface has been determined by observing the position and relative intensity changes of the Pro ring, amide, phosphonate and so‐called spacer (−R) groups vibrations of the enhanced bands in their SERS spectra. Results show that P4 and P5 adsorb onto the silver as anionic molecules mainly via the amide bond (∼1630, ∼1533, ∼1248, ∼800 and ∼565 cm⁻¹), Pro ring (∼956, ∼907 and ∼876 cm⁻¹) and carboxylate group (∼1395 and ∼909 cm⁻¹). Coadsorption of the imine nitrogen atom and PO group with the silver surface, possibly by formation of a weaker interaction with the metal, is also suggested by the enhancement of the bands at 1158 and 1248 cm⁻¹. P1, P2 and P3 show two orientations of their main chain on the silver surface resulting from different interactions of the  C CH₃,  NH and  CONH fragments with this surface. Bonding to the Ag surface occurs mainly through the imino atom (1166 cm⁻¹) for P2, while for P1 and P3 it occurs via the methyl group(s) (1194–1208 cm⁻¹). The amide group functionality (CONH) is practically not involved in the adsorption process for P1 and P2, whereas the C_s P bonds do assist in the adsorption. Copyright © 2008 John Wiley & Sons, Ltd.     

Raman spectroscopic study of the antimonate mineral bottinoite Ni[Sb2(OH)12]·6H2O and in comparison with brandholzite Mg[Sb5+2(OH)12]·6H2O

Raman spectroscopy was used to study the mineral bottinoite and a comparison with the Raman spectra of brandholzite was made. An intense sharp Raman band at 618 cm⁻¹ is attributed to the SbO symmetric stretching mode. The low intensity band at 735 cm⁻¹ is ascribed to the SbO antisymmetric stretching vibration. Low intensity Raman bands were found at 501, 516 and 578 cm⁻¹. Four Raman bands observed at 1045, 1080, 1111 and 1163 cm⁻¹ are assigned to δ SbOH deformation modes. A complex pattern resulting from the overlapping band of the water and hydroxyl units is observed. Raman bands are observed at 3223, 3228, 3368, 3291, 3458 and 3510 cm⁻¹. The first two Raman bands are assigned to water stretching vibrations. The two higher wavenumber Raman bands observed at 3466 and 3552 cm⁻¹ and two infrared bands at 3434 and 3565 cm⁻¹ are assigned to the stretching vibrations of the hydroxyl units. Observed Raman and infrared bands are connected with O H···O hydrogen bonds and their lengths 2.72, 2.79, 2.86, 2.88 and 3.0 Å (Raman) and 2.73, 2.83 and 3.07 Å (infrared). Copyright © 2010 John Wiley & Sons, Ltd.     

Transition of synthetic chromium oxide gel to crystalline chromium oxide: a hot‐stage Raman spectroscopic study

Chromium oxide gel material was synthesised and appeared to be amorphous in X‐ray diffraction study. The changes in the structure of the synthetic chromium oxide gel were investigated using hot‐stage Raman spectroscopy based upon the results of thermogravimetric analysis. The thermally decomposed product of the synthetic chromium oxide gel in nitrogen atmosphere was confirmed to be crystalline Cr₂O₃ as determined by the hot‐stage Raman spectra. Two bands were observed at 849 and 735 cm⁻¹ in the Raman spectrum at 25 °C, which were attributed to the symmetric stretching modes of O Cr^III OH and O Cr^III O. With temperature increase, the intensity of the band at 849 cm⁻¹ decreased, while that of the band at 735 cm⁻¹ increased. These changes in intensity are attributed to the loss of OH groups and formation of O Cr^III O units in the structure. A strongly hydrogen‐bonded water H O H bending band was found at 1704 cm⁻¹ in the Raman spectrum of the chromium oxide gel; however, this band shifted to around 1590 cm⁻¹ due to destruction of the hydrogen bonds upon thermal treatment. Six new Raman bands were observed at 578, 540, 513, 390, 342 and 303 cm⁻¹ attributed to the thermal decomposed product Cr₂O₃. The use of the hot‐stage Raman spectroscopy enabled low‐temperature phase changes brought about through dehydration and dehydroxylation to be studied. Copyright © 2010 John Wiley & Sons, Ltd.     

Investigating the formation of an adduct of formamide with dioxane by means of Raman spectroscopy

Raman experiments of formamide (FA) and p‐dioxane (DX) mixtures at different compositions were carried out. A red shift of the C O stretching band of DX was observed upon dilution, while blue shifts were observed for the C H stretching and C O C bending bands. In this latter region, the new band at ∼441 cm⁻¹, whose intensity shows large dependence on the FA concentration, has been assigned to an FA–DX adduct and it is reported for the first time in the literature. The spectral changes observed in the C O C bending region allowed to determine a proportion of 4:1 FA–DX and this experimental evidence is also presented for the first time by Raman spectroscopy. The present work shows an excellent agreement with our previous investigation, where the 2:1 FA—THF (tetrahydrofuran) adduct was characterized. Copyright © 2008 John Wiley & Sons, Ltd.     

Raman spectroscopic study of the uranyl selenite mineral marthozite Cu[(UO2)3(SeO3)2O2]·8H2O

The mineral marthozite, a uranyl selenite, has been characterised by Raman spectroscopy at 298 K. The bands at 812 and 797 cm⁻¹ were assigned to the symmetric stretching modes of the (UO₂)²⁺ and (SeO₃)²⁻ units, respectively. These values gave the calculated U O bond lengths in uranyl of 1.799 and/or 1.814 Å. Average U O bond length in uranyl is 1.795 Å, inferred from the X‐ray single crystal structure analysis of marthozite by Cooper and Hawthorne. The broad band at 869 cm⁻¹ was assigned to the ν₃ antisymmetric stretching mode of the (UO₂)²⁺ (calculated U O bond length 1.808 Å). The band at 739 cm⁻¹ was attributed to the ν₃ antisymmetric stretching vibration of the (SeO₃)²⁻ units. The ν₄ and the ν₂ vibrational modes of the (SeO₃)²⁻ units were observed at 424 and 473 cm⁻¹. Bands observed at 257, and 199 and 139 cm⁻¹ were assigned to OUO bending vibrations and lattice vibrations, respectively. O H···O hydrogen bond lengths were inferred using Libowiztky's empirical relation. The infrared spectrum of marthozite was studied for complementation. Copyright © 2008 John Wiley & Sons, Ltd.     

Raman spectroscopic study of the mineral finnemanite Pb5(As3+O3)3Cl

The arsenite mineral finnemanite Pb₅(As³⁺ O₃)₃Cl has been studied by Raman spectroscopy. The most intense Raman band at 871 cm⁻¹ is assigned to the ν₁(AsO₃)³⁻ symmetric stretching vibration. Three Raman bands at 898, 908 and 947 cm⁻¹ are assigned to the ν₃(AsO₃)³⁻ antisymmetric stretching vibration. The observation of multiple antisymmetric stretching vibrations suggest that the (AsO₃)³⁻ units are not equivalent in the molecular structure of finnemanite. Two Raman bands at 383 and 399 cm⁻¹are assigned to the ν₂(AsO₃)³⁻ bending modes. Density functional theory enabled calculation of the position of AsO₃²⁻ symmetric stretching mode at 839 cm⁻¹, the antisymmetric stretching mode at 813 cm⁻¹ and the deformation mode at 449 cm⁻¹. Raman bands are observed at 115, 145, 162, 176, 192, 216 and 234 cm⁻¹ as well. The two most intense bands are observed at 176 and 192 cm⁻¹. These bands are assigned to PbCl stretching vibrations and result from transverse/longitudinal splitting. The bands at 145 and 162 cm⁻¹ may be assigned to Cl Pb Cl bending modes. Copyright © 2009 John Wiley & Sons, Ltd.     

Raman spectroscopic study of the mineral gerstleyite Na2(Sb,As)8S13·2H2O and comparison with some heavy‐metal sulfides

The mineral gerstleyite is described as a sulfosalt as opposed to a sulfide. This study focuses on the Raman spectrum of gerstleyite Na₂(Sb,As)₈S₁₃·2H₂O and makes a comparison with the Raman spectra of other common sulfides including stibnite, cinnabar and realgar. The intense Raman bands of gerstleyite at 286 and 308 cm⁻¹ are assigned to the SbS₃E antisymmetric and A₁ symmetric stretching modes of the SbS₃ units. The band at 251 cm⁻¹ is assigned to the bending mode of the SbS₃ units. The mineral stibnite also has basic structural units of Sb₂S₃ and SbS₃ pyramids with C_3v symmetry. Raman bands of stibnite Sb₂S₃ at 250, 296, 372 and 448 cm⁻¹ are assigned to Sb S stretching vibrations and the bands at 145 and 188 cm⁻¹ to S Sb S bending modes. The Raman band for cinnabar HgS at 253 cm⁻¹ fits well with the assignment of the band for gerstleyite at 251 cm⁻¹ to the S Sb S bending mode. Raman bands in similar positions are observed for realgar AsS and orpiment As₂S₃. Copyright © 2010 John Wiley & Sons, Ltd.     

Raman and infrared spectroscopic study of the molybdate‐containing uranyl mineral calcurmolite

Raman and infrared spectra of calcurmolite were recorded and interpreted from the uranium and molybdenum polyhedra, water molecules and hydroxyls point of view. U O bond lengths in uranyl and Mo O bond lengths in MoO₆ octahedra were calculated and O H…O bond lengths were inferred from the spectra. The mineral calcurmolite is characterised by bands assigned to the vibrations of the UO₂ units. These units provide intense Raman bands at 930, 900 and 868 and 823 cm⁻¹. These bands are attributed to the anti‐symmetric and symmetric stretching modes of the UO₂ units, respectively. Raman bands at 794, 700, 644, 378 and 354 cm⁻¹ are attributed to vibrations of the MoO₄ units. The bands at 693 and 668 cm⁻¹ are assigned to the anti‐symmetric and symmetric A_g modes of the terminal MO₂ units. Similar bands are observed at 797 and 773 cm⁻¹ for koechlinite and 798 and 775 cm⁻¹ for lindgrenite. It is probable that some of the bands in the low wavenumber region are attributable to the bending modes of MO₂ units. Copyright © 2008 John Wiley & Sons, Ltd.     

Thermo‐Raman spectroscopy of synthetic nesquehonite — implication for the geosequestration of greenhouse gases

Pure nesquehonite (MgCO₃·3H₂O)/Mg(HCO₃)(OH)·2H₂O was synthesised and characterised by a combination of thermo‐Raman spectroscopy and thermogravimetry with evolved gas analysis. Thermo‐Raman spectroscopy shows an intense band at 1098 cm⁻¹, which shifts to 1105 cm⁻¹ at 450 °C, assigned to the ν₁CO₃²⁻ symmetric stretching mode. Two bands at 1419 and 1509 cm⁻¹ assigned to the ν₃ antisymmetric stretching mode shift to 1434 and 1504 cm⁻¹ at 175 °C. Two new peaks at 1385 and 1405 cm⁻¹ observed at temperatures higher than 175 °C are assigned to the antisymmetric stretching modes of the (HCO₃)⁻ units. Throughout all the thermo‐Raman spectra, a band at 3550 cm⁻¹ is attributed to the stretching vibration of OH units. Raman bands at 3124, 3295 and 3423 cm⁻¹ are assigned to water stretching vibrations. The intensity of these bands is lost by 175 °C. The Raman spectra were in harmony with the thermal analysis data. This research has defined the thermal stability of one of the hydrous carbonates, namely nesquehonite. Thermo‐Raman spectroscopy enables the thermal stability of the mineral nesquehonite to be defined, and, further, the changes in the formula of nesquehonite with temperature change can be defined. Indeed, Raman spectroscopy enables the formula of nesquehonite to be better defined as Mg(OH)(HCO₃)·2H₂O. Copyright © 2008 John Wiley & Sons, Ltd.     

Raman spectroscopic study of the antimonate mineral brandholzite Mg[Sb2(OH)12]·6H2O

Raman spectra of brandholzite Mg[Sb₂(OH)₁₂]·6H₂O were studied, complemented with infrared spectra, and related to the structure of the mineral. An intense Raman sharp band at 618 cm⁻¹ is attributed to the SbO symmetric stretching mode. The low‐intensity band at 730 cm⁻¹ is ascribed to the SbO antisymmetric stretching vibration. Low‐intensity Raman bands were found at 503, 526 and 578 cm⁻¹. Corresponding infrared bands were observed at 527, 600, 637, 693, 741 and 788 cm⁻¹. Four Raman bands observed at 1043, 1092, 1160 and 1189 cm⁻¹ and eight infrared bands at 963, 1027, 1055, 1075, 1108, 1128, 1156 and 1196 cm⁻¹ are assigned to δ SbOH deformation modes. A complex pattern resulting from the overlapping band of the water and hydroxyl units is observed. Raman bands are observed at 3240, 3383, 3466, 3483 and 3552 cm⁻¹; infrared bands at 3248, 3434 and 3565 cm⁻¹. The Raman bands at 3240 and 3383 cm⁻¹ and the infrared band at 3248 cm⁻¹ are assigned to water‐stretching vibrations. The two higher wavenumber Raman bands observed at 3466 and 3552 cm⁻¹ and two infrared bands at 3434 and 3565 cm⁻¹ are assigned to the stretching vibrations of the hydroxyl units. Observed Raman and infrared bands in the OH stretching region are associated with O‐H···O hydrogen bonds and their lengths 2.72, 2.79, 2.86, 2.88 and 3.0 Å (Raman) and 2.73, 2.83 and 3.07 Å (infrared). Copyright © 2009 John Wiley & Sons, Ltd.     

Raman spectroscopic investigation of pure and ytterbium‐doped rare earth silicate crystals

Raman spectroscopy was used to study the molecular structure of a series of selected rare earth (RE) silicate crystals including Y₂SiO₅ (YSO), Lu₂SiO₅ (LSO), (Lu_0.5Y_0.5)₂SiO₅ (LYSO) and their ytterbium‐doped samples. Raman spectra show resolved bands below 500 cm⁻¹ region assigned to the modes of SiO₄ and oxygen vibrations. Multiple bands indicate the nonequivalence of the RE O bonds and the lifting of the degeneracy of the RE ion vibration. Low intensity bands below 500 cm⁻¹ are an indication of impurities. The (SiO₄)⁴⁻ tetrahedra are characterized by bands near 200 cm⁻¹ which show a separation of the components of ν₄ and ν₂, in the 500–700 cm⁻¹ region which are attributed to the distorting bending vibration and in the 880–1000 cm⁻¹ region which are attributed to the symmetric and antisymmetric stretching vibrational modes. The majority of the bands in the 300–610 cm⁻¹ region of Re₂SiO₅ were found to arise from vibrations involving both Si and RE ions, indicating that there is considerable mixing of Si displacements with Si O bending modes and RE O stretching modes. The Raman spectra of RE silicate crystals were analyzed in terms of the molecular structure of the crystals, which enabled separation of the bands attributed to distinct vibrational units. Copyright © 2007 John Wiley & Sons, Ltd.     

Effect of amino acid modifications on the molecular structure of adsorbed and nonadsorbed bombesin 6–14 fragments on an electrochemically roughened silver surface

This work used infrared absorption and Raman spectroscopy to determine the structure of seven modified fragments (residues 6–14 of the polypeptide chain) of bombesin (BN^6–14). The peptides studied are cyclo[D ‐Phe⁶, His⁷, Leu¹⁴]BN^6–14, [D ‐Phe⁶, Leu‐NHEt¹³, des‐Met¹⁴]BN^6–14, [D ‐Phe⁶, Leu¹³‐®‐p‐chloro‐Phe¹⁴]BN^6–14, [D ‐Phe⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14, [D ‐Tyr⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14, [D ‐Tyr⁶, β‐Phe¹¹, Phe¹³, Nle¹⁴OH]BN^6–14 and [D ‐Cys⁶, Asn⁷, D ‐Ala¹¹, Cys¹⁴]BN^6–14. These peptides are potent bombesin agonists useful in the treatment of tumors. Surface‐enhanced Raman scattering (SERS) spectroscopy was also used to examine the behavior of these molecules on an electrochemically roughened silver surface. The SERS spectra reveal that substituting native amino acids in these molecules with synthetic ones changes their adsorption state slightly on an electrochemically roughened surface of silver. The peptides [D ‐Tyr⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14 and [D ‐Tyr⁶, β‐Phe¹¹, Phe¹³, Nle¹⁴OH]BN^6–14 tend to adsorb strongly on this surface via C fragment (∼1400 cm⁻¹). The observed medium enhancement of the Trp⁸ residue and amide bond Raman signals indicate further interactions between these fragments and the surface. [D ‐Phe⁶, Leu‐NHEt¹³, des‐Met¹⁴]BN^6–14 and [D ‐Cys⁶, Asn⁷, D ‐Ala¹¹, Cys¹⁴]BN^6–14 are shown to be coordinated to the silver through  CONH , CO, and the indole ring. The strongest SERS bands (∼1506, ∼1275, ∼1149, and ∼1007 cm⁻¹) of [D ‐Phe⁶, Leu¹³‐®‐p‐chloro‐Phe¹⁴]BN^6–14 and [D ‐Phe⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14 suggest that these two peptides bind to the silver via Trp⁸ and  CONH . In the case of cyclo[D ‐Phe⁶, His⁷, Leu¹⁴]BN^6–14, the formation of a peptide/Ag complex is confirmed by the strong SERS bands involving Trp⁸ and  CONH vibrations, which are accompanied by a SERS signal due to the CO vibrations. For these analogs, the relative potency for inhibition of binding of ¹²⁵I‐[Tyr⁴]BN to rat pancreas acini cells was correlated with the behavior of the amide bond on the silver surface, while the contribution of the structural components to the ability to interact with the rGRP‐R was correlated with the SERS patterns. Copyright © 2008 John Wiley & Sons, Ltd.     

Raman spectroscopic study of the uranyl mineral pseudojohannite Cu6.5[(UO2)4O4(SO4)2]2(OH)5·25H2O

Raman spectra of pseudojohannite were studied and related to the structure of the mineral. Observed bands were assigned to the stretching and bending vibrations of (UO₂)²⁺ and (SO₄)²⁻ units and of water molecules. The published formula of pseudojohannite is Cu_6.5(UO₂)₈[O₈](OH)₅[(SO₄)₄]·25H₂O. Raman bands at 805 and 810 cm⁻¹ are assigned to (UO₂)²⁺ stretching modes. The Raman bands at 1017 and 1100 cm⁻¹ are assigned to the (SO₄)²⁻ symmetric and antisymmetric stretching vibrations. The three Raman bands at 423, 465 and 496 cm⁻¹ are assigned to the (SO₄)²⁻ν₂ bending modes. The bands at 210 and 279 cm⁻¹ are assigned to the doubly degenerate ν₂ bending vibration of the (UO₂)²⁺ units. U O bond lengths in uranyl and O H···O hydrogen bond lengths were calculated from the Raman and infrared spectra. Copyright © 2009 John Wiley & Sons, Ltd.     

Transition of chromium oxyhydroxide nanomaterials to chromium oxide: a hot‐stage Raman spectroscopic study

The transition of disc‐like chromium hydroxide nanomaterials to chromium oxide nanomaterials has been studied by hot‐stage Raman spectroscopy. The structure and morphology of α‐CrO(OH) synthesised using hydrothermal treatment were confirmed by X‐ray diffraction (XRD) and transmission electron microscopy (TEM). The Raman spectrum of α‐CrO(OH) is characterised by two intense bands at 823 and 630 cm⁻¹ attributed to ν₁ Cr^III O symmetric stretching mode and the band at 1179 cm⁻¹ attributed to Cr^III OH δ deformation modes. No bands are observed above 3000 cm⁻¹. The absence of characteristic OH stretching vibrations may be due to short hydrogen bonds in the α‐CrO(OH) structure. Upon thermal treatment of α‐CrO(OH), new Raman bands are observed at 599, 542, 513, 396, 344 and 304 cm⁻¹, which are attributed to Cr₂O₃. This hot‐stage Raman study shows that the transition of α‐CrO(OH) to Cr₂O₃ occurs before 350 °C. Copyright © 2010 John Wiley & Sons, Ltd.