Stimulated Raman scattering measurements of H2 vibration–vibration transfer

We present a new set of V–V rate coefficients for vibrational levels 0–5 in H₂ at 300 K, measured using a stimulated Raman–spontaneous Raman pump/probe apparatus. The measured rate of the non-resonant process, H₂(v = 1) + H₂(v = 1) → H₂(v = 0) + H₂(v = 2), is consistent with the previously reported experimental value of Kreutz et al. However, semi-classical predictions of such non-resonant processes, using the identical inter-molecular potential and methodology to that given by Cacciatore and Billing, results in rates which are too slow, by a factor of approximately 3. For the “resonant” V–V process, H₂(v = 1) + H₂(v = 0) → H₂(v = 0) + H₂(v = 1), the semi-classical rate is found to be too slow by an even larger factor, of approximately 30, compared to the experimental rate, but consistent with the previously reported experimental result of Farrow and Chandler. Further, unlike the semi-classical model prediction in which the (1, 1 → 2, 0) process rate is predicted to exceed that of the (1, 0 → 0, 1) process, the experimental data shows it to be a factor of approximately 2.5 less, suggesting that semi-classical methods that treat the rotational motion classically are unsuitable for the highly anharmonic H₂ molecule. The ratio of pure rotation and rotation–vibration Raman cross sections for scattering from levels 0 and 1 is also determined, with results which agree with calculations of Schwartz and LeRoy, but are somewhat larger than previous experimental results of Cureton.     

Structure and redox behavior of Ru(II)-diene complexes

A series of Ru(acac)₂(η⁴-diene) complexes containing cis- and trans-diene coordination have been investigated by cyclic voltammetry to correlate structural bonding and conformation patterns of diene ligands with redox behaviors. The solid-state structure of Ru(acac)₂(2,3-dimethyl-1,3-butadiene) has been determined by single crystal X-ray diffraction methods. Ru(acac)₂(2,3-dimethyl-1,3-butadiene) crystallizes in the monoclinic space group C2/c with a = 12.368(2) Å, b = 17.0600(2) Å, c = 16.0110(2) Å, β = 98.4405(10)° and V = 3341.38(10) ų for Z = 8. A structural comparison between several Ru-trans-η⁴-diene complexes and Ru-η⁴-1,3-cyclohexadiene revealed no difference in the Ru-C(diene) bond distances. However, through cyclic voltammetry experiments these species demonstrated different redox behavior, as function of the coordinated diene ligand.     

Chemistry of tetracyanoethylene (TCNE): From TCNE to dicyanomethylacetate

In the presence of CoCl₂ · 6H₂O, the reaction of TCNE (tetracyanoethylene) with CH₃OH forms a dicyanomethylacetate molecule, which has been obtained as one solvent molecule in one new compound {[Co(bpy)₂CN₂][(NC)₂C-CO₂CH₃]} · 2H₂O (1). It was characterized by IR spectra, UV-Vis spectra, and cyclic voltammogram. Its structure was determined by X-ray crystallography: 1 crystallizes in P2(1)/n with a = 13.3368(17), b = 12.5299(16), c = 16.074(2) Å, α = 90, β = 94.6320(10), γ = 90°, and Z = 2.     

Singlet-triplet energy separations in divalent five-membered cyclic conjugated C5H3X, C4H3SiX, C4H3GeX, C4H3SnX, and C4H3PbX (X = H, F, Cl, and Br)

Singlet-triplet energy gaps in cyclopenta-2,4-dienylidene, as well as its 2- or 3-halogenated derivatives, are compared and contrasted with their sila, germa, stana, and plumba analogues; at HF/6-31G* and B3LYP/ 6-311++G(3df, 2p) levels of theory. Energy gaps (ΔG_t-s), between triplet (t) and singlet (s) states, appear linearly proportional to: (i) the size of the group 14 divalent element (M = C, Si, Ge, Sn and Pb), (ii) the angle ∠C-M-C, and (iii) the ΔG_(LUMO-HOMO) of the singlet state involved. The magnitude of ΔG_t-s, for each 2- and/or 3-substituted species studied, increases with an order of: carbenes < silylenes < germylenes < stanylenes < plumbylenes. This order reverses for the barriers of the ring puckering. The puckering occurs with more ease for every singlet, compared to its corresponding triplet form.Regardless of the group 14 element (M) employed, every 3-halo-substituted species is more stable than the corresponding 2-halo-substituted isomer. For M = Pb, Sn and/or Ge; 3-halo-substituted species have higher ΔG_t-s than their corresponding 2-halo-substituted analogues. For M = Si, similar ΔG_t-s are found for 2- and 3-halogenated isomers. For M = C, 3-halo-substituted species have lower ΔG_t-s than their corresponding 2-halo-substituted analogues.Every cyclic singlet has a larger ∠C-M-C angle, than its corresponding cyclic triplet state, except for 3-halosilacyclopenta-2,4-dienylidenes where triplet has a larger ∠C-M-C angle than its corresponding singlet state.     

Synthesis,spectral characterization,electrochemical properties and antimicrobial screening of sulfur containing acylferrocenes

Several known and eight new sulfur containing acylferrocenes of the general formula FcCO(CH₂)_nSR (where Fc = ferrocenyl, n = 1 or 2 and R = alkyl, 4-bromobenzyl or 2,6-dichlorobenzyl group) were synthesized in order to test their in vitro antimicrobial activity against 11 bacterial and three fungal/yeast strains. It has been shown that only four of the 14 ketones are completely inactive at the tested dose, while the activities of the other ones were noteworthy. All new compounds were well characterized by IR and NMR spectral data, and their electrochemical properties were investigated by cyclic voltammetry. The X-ray crystal structures of two representative ketones are also presented.     

Structural control of dithiazolyl radicals: Case studies on 3′- and 4′-cyano-benzo-1,3,2-dithiazolyl, NCC6H3S2N

Dithiazolyl radicals with π-stacking motifs have attracted particular interest because of their ability to exhibit spin-switching between diamagnetic distorted π-stacks and paramagnetic regular π-stacked structures through a solid state phase transition. Previous studies indicate that inclusion of electronegative heteroatoms into the backbone favours lamellar structures. This methodology has been extended to the synthesis and characterisation of the title compound, 4′-cyanobenzo-1,3,2-dithiazolyl (4-NCBDTA). Its electronic structure is probed through DFT calculations, cyclic voltammetry and EPR spectroscopy and its crystal structure determined by X-ray powder diffraction at room temperature. Variable temperature SQUID magnetometry reveals that 4-NCBDTA undergoes two phase transitions, each exhibiting bistability; a high temperature phase transition occurs at room temperature (T_C↓ = 291 K, T_C↑ = 304 K, ΔT = 13 K); whilst the low temperature phase transition occurs below liquid nitrogen temperatures (T_C↓ = 37 K, T_C↑ = 28 K;ΔT = 9 K).     

Synthesis,electrochemistry and in situ spectroelectrochemistry of a new Co(III) thio Schiff-base complex with N,N′-bis(2-aminothiophenol)-1,4-bis(carboxylidene phenoxy)butane

A new cobalt Schiff-base complex, [Co(L)(OH)(H₂O)] (where L = [N,N′-bis(2-aminothiophenol)-1,4-bis(carboxylidene phenoxy)butane), was synthesized and its electrochemical and spectroelectochemical properties were investigated using cyclic voltammetry (CV), differential pulse voltammetry (DPV) and thin-layer spectro-electrochemistry in solutions of dimethyl sulfoxide (DMSO) and dichloromethane (CH₂Cl₂). The [Co(L)(OH)(H₂O)] complex displays two well-defined reversible reduction processes with the corresponding anodic waves. The half-wave potentials of the first and second reduction processes were displayed at E_1/2 = 0.08 V and E_1/2 = −1.21 V (scan rate: 0.100 Vs⁻¹) in DMSO, and E_1/2 = −0.124 V and E_1/2 = −1.32 V (scan rate: 0.100 Vs⁻¹) in CH₂Cl₂. The potentials of the reduction processes in DMSO are shifted toward negative potentials (0.220–0.112 V) compared to those in CH₂Cl₂. The electrochemical results are assigned to two one-electron reduction processes; [Co(III)L] + ⁻e → [Co(II)L]⁻ and [Co(II)L]⁻ + ⁻e → [Co(I)L]²⁻. The six-coordination of the complex remains unchanged during the reduction processes and the electron transfer processes were not followed by a chemical reaction upon scan reversal. It was also seen that [Co(L)(OH)(H₂O)] was reduced at a more positive potential than the corresponding salen analogs. The shift and reversibility are apparently related to the high degree of electron delocalization of the [Co(L)(OH)(H₂O)] complex, having a N₂O₂S₂ donor set and two additional benzene units. Additionally, in situ spectroelectrochemical measurements support Co(III)/Co(II) and Co(II)/Co(I) reversible reduction processes with the observation of the corresponding spectral changes with the applied potentials E_app = −0.40 and −1.60 V. Application of the spectroelectrochemical results allowed the determination ofE_1/2 and n (the number of electrons) from the spectra of the fully oxidized and reduced species in one unified experiment as well. The results obtained by this method are in agreement with those by the CV and DPV methods.     

Theoretical study of long range electron transfer in Phthalimide–Peptide–Methyl Aminoacetate Model molecules

Long-range electron transfer (ET) matrix elements (V_PS), rate constants (k_ET) and reorganization energies for ET from phthalimide radical (pha) moiety to methyl aminoacetate radical (aa) moiety in pa–(gly)_n = 0–6–aa (pa = C₆H₄(CO)₂N–(CH₂CO), gly = glycine, aa = HNCH₂COOCH₃) ionic molecules have been investigated using two-state variational method (TSVM) and classical rate model. Calculations on V_PS reveal that the overlap between the frontier orbitals of two diabatic states is quite small, which leads to a small value of V_PS. k_ET has a minimum at the range n = 1–3 for β-strand conformation, but linearly increases as the peptide chain length (n) increases for pro II-helix conformation. These results are in good agreement with the experimental predictions. Relevant ET mechanisms are elucidated. The transition energies for charge transfer in such systems are also calculated to test the influences of local dipoles on the potentials of the donor and acceptor. For comparison electron couplings in [pa–(gly)_n = 1,3–aa]⁺ cations are calculated and the effects of electron correlation on inner reorganization energies in pha + pha^−/+ self-exchange reactions are examined at different levels of theory respectively. Calculated results are discussed also.     

Halogenation of ketones with N-halosuccinimides under solvent-free reaction conditions

Several aryl substituted ketones, cyclic ketones, 1,3-diketones and a β-ketoamide were halogenated with N-halosuccinimides under solvent-free reaction conditions (SFRC) at various temperatures (20-80 °C), whereas less enolized ketones required the presence of an acid catalyst (p-toluenesulfonic acid, PTSA). Bromination of substituted acetophenones obeys first order kinetics v=k_Br[ketone] and the following correlation with the keto-enol equilibrium constant: log k_Br=0.3pK_E+C₁, less enolized substrates being more reactive; the moderate positive charge developed in the rate determining step was confirmed by the Hammett correlation (ρ=−0.5). On the other hand, in cyclic ketones an opposite relation was observed: log k_Br=−0.6pK_E+C₂, indicating higher reactivity of substrates with higher enolization constant (K_E). The important role of the nature of the solvent (MeCN, MeOH) in preorganization of the ketone-NBS-PTSA mixture prior to SFRC bromination was found.     

Efficient solid-phase synthesis of cyclic RGD peptides under controlled microwave heating

Cyclic RGD peptides are potent antagonists for the α_vβ₃ integrin receptor. In this Letter, microwave-assisted solid-phase synthesis of cyclic RGD peptides is described. In a coupling reaction between Fmoc-Arg(Pbf)-OH and high-loading H-Gly-Trt(2-Cl) resin, multiple coupling reactions were required for completion under the conventional HBTU activation. We found that the use of COMU, a new coupling reagent, under microwave heating to 50 °C accelerated the reaction even inside the resin. This method was applicable to the synthesis of linear pentapeptides, H-Asp(OtBu)-Xxx-Yyy-Arg(Pbf)-Gly-OH (Xxx = d-Phe(p-Br) or d-Tyr, Yyy = Lys(Boc) or MeVal). Cyclization of these peptides followed by deprotection gave the desired cyclic RGD peptides with high purity.     

Synthesis,crystal structure and catalytic activity of ruthenium(II) carbonyl complexes containing ONO and ONS donor ligands

Diamagnetic ruthenium(II) complexes of the type [Ru(L)(CO)(B)(EPh₃)] [where E = As, B = AsPh₃; E = P, B = PPh₃, py (or) pip and L = dibasic tridentate ligands dehydroacetic acid semicarbazone (abbreviated as dhasc) or dehydroacetic acid phenyl thiosemicarbazone (abbreviated as dhaptsc)] were synthesized from the reaction of [RuHCl(CO)(B)(EPh₃)₂] (where E = As, B = AsPh₃; E = P, B = PPh₃, py (or) pip) with different tridentate chelating ligands derived from dehydroacetic acid with semicarbazide or phenylthiosemicarbazide. All the complexes have been characterized by elemental analysis, FT-IR, UV–Vis and ¹H NMR spectral methods. The coordination mode of the ligands and the geometry of the complexes were confirmed by single crystal X-ray crystallography of one of the complexes [Ru(dhaptsc)(CO)(PPh₃)₂] (5). All the complexes are redox active and are monitored by cyclic voltammetric technique. Further, the catalytic efficiency of one of the ruthenium complexes (5) was determined in the case of oxidation of primary and secondary alcohols into their corresponding aldehydes and ketones in the presence of N-methylmorpholine-N-oxide.     

Z-Selective intramolecular Horner-Wadsworth-Emmons reaction for the synthesis of macrocyclic alkenes

The Z-selective intramolecular Horner-Wadsworth-Emmons reaction of the substrates 7-12 (RO)₂P(O)CHR′CO₂Et (R′ = (CH₂)_nCHO) (R = Ph or o-tBuC₆H₄) gives the 13-18-membered cyclic alkenes selectively (up to Z:E = 97:3) in good yields using NaH in THF under high dilution conditions.     

Crystal chemistry and crystallography of the SrR2CuO5 (R=lanthanides) phases

The crystal chemistry and crystallography of the compounds SrR₂CuO₅ (Sr-121, R=lanthanides) were investigated using the powder X-ray Rietveld refinement technique. Among the 11 compositions studied, only R=Dy and Ho formed the stable SrR₂CuO₅ phase. SrR₂CuO₅ was found to be isostructural with the “green phase”, BaR₂CuO₅. The basic structure is orthorhombic with space group Pnma. The lattice parameters for SrDyCuO₅ are a=12.08080(6) Å, b=5.60421(2) Å, c=7.12971(3) Å, V=482.705(4) Å³, and Z=8; and for the Ho analog are a=12.03727(12) Å, b=5.58947(7) Å, c=7.10169(7) Å, V=477.816(9) Å³, and Z=8. In the SrR₂CuO₅ structure, each R is surrounded by seven oxygen atoms, forming a monocapped trigonal prism (RO₇). The isolated CuO₅ group forms a distorted square pyramid. Consecutive layers of prisms are stacked in the b-direction. Bond valence calculations imply that residual strain is largely responsible for the narrow stability of the SrR₂CuO₅ phases with R=Dy and Ho only. X-ray powder reference diffraction patterns for SrDy₂CuO₅ and SrHo₂CuO₅ were determined.     

Zygosporamide, a cytotoxic cyclic depsipeptide from the marine-derived fungus Zygosporium masonii

Zygosporamide (1), a new cyclic pentadepsipeptide, was isolated from the seawater-based fermentation broth of a marine-derived fungus identified as Zygosporium masonii. The structure of 1, which is composed of α-hydroxyleucic acid and both d- and l-amino acids, was determined by combined spectral and chemical methods. Despite a simple structure, zygosporamide illustrated significant cytotoxicity in the NCI’s 60 cell line panel (median GI₅₀ = 9.1 μM), with highly enhanced selectivity against the CNS cancer cell line SF-268 (GI₅₀ = 6.5 nM) and the renal cancer cell line RXF 393 (GI₅₀ ? 5.0 nM).     

Morphology and crystallinity of the two diastereomer racemates of triglycidyl isocyanurate (TGIC)

Triglycidyl isocyanurate [2451-62-9] is a trifunctional monomer containing epoxy groups, and is presently used mainly for cross-linking carboxyl-functional polyester resins in powder coatings. There are three chiral carbon atoms in its molecule, and due to its symmetrical structure four antipodes exist according to the configuration of the chiral carbon atoms; namely RRR, SSS, RRS and SSR. Therefore the synthesized or commercially available TGIC is a physical mixture of two diastereomer racemates, i.e. beta-TGIC or RRR/SSS and alpha-TGIC or RRS/SSR. The physical and chemical properties of the two diastereomer racemates of TGIC are different. Their morphology and crystalline structure have been determined by polarizing microscopy and X-ray diffraction analysis. Beta-TGIC has hexagonal symmetry and belongs to the space group R3 or R3m. The cell parameters are: a₀ = 14.037 Å, c₀ = 11.55 Å, and cell volume: V₀ = 1970.88 Å³. Alpha-TGIC has orthorhombic crystallinity and belongs to the space group Pna2₁. Its cell parameters are: a₀ = 9.29 Å, b₀ = 9.48 Å, c₀ = 15.66 Å and cell volume: V₀ = 1379.16 Å³.     

X-ray single crystal structures of Hg(AuF6)2 and AgFAuF6

Hg(AuF₆)₂ crystallizes at 200 K in the orthorhombic space group Pbcn (No. 60) with a = 917.67(7) pm, b = 971.59(8) pm, c = 962.04(8) pm, and Z = 4. Mercury atoms are coordinated by eight fluorine atoms with six short and two long Hg-F contacts. HgF₈ polyhedra share their four vertices and two edges with six AuF₆ units forming a tridimensional framework.The results of X-ray diffraction analysis on single crystals of AgFAuF₆ are in agreement with previously known powder X-ray diffraction data (Casteel et al, J. Solid State Chem. 96 (1992) 84-96). AgFAuF₆ crystallizes orthorhombic in the space group Pnma (No. 62), a = 717.06(7) pm, b = 761.67(7) pm, c = 1013.61(10) pm at 200 K, Z = 4.     

Crystal chemistry and thermodynamic properties of anisotropic Ce2Ni7H4.7 hydride

A new intermetallic deuteride Ce₂Ni₇D_4.7 with an anomalous volume expansion has been studied. Its structure was solved on the basis of in situ neutron diffraction data. Expansion proceeds along the c-axis and within the CeNi₂ slabs only. All D atoms are located inside these slabs and on the border between CeNi₂ and CeNi₅. Ordering of D atoms in the bulk of CeNi₂ is accompanied by substantial deformation of these slabs thus lowering the hexagonal symmetry to orthorhombic [space group Pmcn (No. 62); a=4.9251(3) Å, b=8.4933(4) Å, c=29.773(1) Å]. Inside the CeNi₂ layer the hydrogen sublattice is completely ordered; all D-D distances exceed 2.0 Å. Local coordination of Ni by D inside the CeNi₂ blocks is of “open”, saddle-like type. Hydrogen ordering is mainly determined by Ce-H and H-H interactions. The pressure-composition-temperature measurements yielded the following thermodynamic parameters of the formation of the hydride: ΔH=−22.4 kJ/mol_H, ΔS=−59.9 J/(K mol_H).     

Co(III) complexes of the type [(L)Co(O2CO)] (L = tripodal tetraamine ligand): Synthesis,structure, DFT calculations and Co NMR

The syntheses and characterisation of the Co(III) complexes [(L)Co(O₂CO)]ClO₄ (L = a tripodal tetraamine ligand = baep, abap, uns-penp, dppa, trpn) are reported. Geometric isomers are possible for all but the trpn complex, owing to the non-equivalence of the three arms on the tripodal ligand, and both NMR and X-ray crystallography are used to identify the single isomer formed. X-ray crystal structures of the complexes [(L)Co(O₂CO)]ClO₄ · xH₂O (L = baep, x = 0.5; L = abap, x = 0; L = uns-penp, x = 1; L = dppa, x = 0; L = trpn, x = 1) are reported; little variation is observed in the geometry of the carbonate chelate ring while significant lengthening of bonds and expansion of angles involving the cobalt ion occurs as the number of six-membered chelate rings in the complex cations increases. ⁵⁹Co NMR chemical shift data for the complexes show the expected linear relationship between λ_max, the wavelength of the lowest energy d–d transition, and γ, the magnetogyric ratio of the ⁵⁹Co nucleus. An excellent correlation between Δ, the d orbital splitting parameter, and δ(⁵⁹Co) also exists for these complexes. Rate data for the acid hydrolysis of [(L)Co(O₂CO)]⁺ (L = uns-penp, dppa) in 1.0 M HClO₄ differ by two orders of magnitude, and this is attributed to the differing steric accessibility of the endo O atoms in each complex. DFT calculations on the complexes reproduce the isomeric preferences, UV–Vis and ⁵⁹Co NMR spectroscopic data well, provided that solvent effects are included.     

Compromise between conjugation length and charge-transfer in nonlinear optical η-monocyclopentadienyliron(II) complexes with substituted oligo-thiophene nitrile ligands: Synthesis, electrochemical studies and first hyperpolarizabilities

A systematic series of η⁵-monocyclopentadienyliron(II) complexes with substituted oligo-thiophene nitrile ligands of general formula [FeCp(P_P)(NC{SC₄H₂}_nNO₂)][PF₆] (P_P = dppe, (+)-diop; n = 1-3) has been synthesized and characterized. The electrochemical behaviour of the new compounds was explored by cyclic voltammetry. Quadratic hyperpolarizabilities (β) of the complexes with dppe coligands have been determined by hyper-Rayleigh scattering (HRS) measurements at two fundamental wavelengths of 1.064 and 1.550 μm, to uncover the two-photon resonance effect and to estimate static β values. The obtained overall results are found to be better than for the related η⁵-monocyclopentadienyliron(II) complexes with p-benzonitrile derivatives. Although an increase of the resonant β at 1.064 μm with increasing number of thiophene units in the conjugated ligand was found (up to 910 × 10⁻³⁰ esu), the static values β₀ remain practically unchanged, as shown by the 1.550 μm measurements. Combined with the electrochemical and spectroscopic data (IR, NMR, UV-vis), this remarkable evolution of β shows that the increase of conjugation length is balanced by a decrease in charge-transfer efficiency.     

Characterization of cyclic and non-cyclic poly-(ether-urethane)s bio-based sugar diols by a combination of MALDI-TOF and NMR

Matrix-assisted laser desorption/ionization (MALDI) mass spectrometry and NMR spectroscopy have been applied for characterization of novel poly-(ether-urethane)s (PolyEU) based on various diols derived from starch and two diisocyanates. First, numerous polyurethanes soft and hard blocks were prepared by polyaddition of isosorbide (3), isomannide (4) or isoidide (5) with 4,4′-diphenylmethane diisocyanate (MDI) (7) or hexane-1,6-diisocyanate (HDI) (8). The polyaddition of isoidide and MDI yields 85% of polyurethane hard block with high inherent viscosity (η_inh = 0.35 dL/g) with linear chains as the main products. In the case of polyurethane based on isosorbide and MDI a large amount of cyclic compounds was formed with relatively high viscosity (η_inh = 0.29 dL/g) and good yield (77%). This polyurethane hard block presents a high glass transition temperature (T_g = 183 °C) and an excellent thermal stability until 250 °C (T_g = 77 °C of the polyurethane soft block based on isosorbide and HDI). Second, polyaddition of an aliphatic diol (6a) based on isosorbide and MDI yielded new poly-(ether-urethane) soft-hard blocks with quantitative yield (>95%). This polymer is soluble in common organic solvents and has a number-average molecular weight of 7950 Da with a polydispersity index of 1.43. The MALDI-TOF spectrum of this poly-(ether-urethane) indicated the formation of high molar fraction of cycles (Ca and Cb). The pure cyclic poly-(ether-urethane) soft-hard block presents a T_g of 141 °C.