Cooperative effect of factors governing molecular ion yields in desorption/ionization mass spectrometry

Factors governing the molecular ion yields of amino acids and peptides have been studied using fast atom bombardment (FAB) and matrix-assisted laser desorption/ionization (MALDI) mass spectrometry (MS) in positive-ion mode. The ion yields of protonated amino acids under FAB conditions are dependent on proton affinity (PA), hydrophobicity, and aromaticity of amino acids. Both PA and hydrophobicity contribute to an increase in the ion yields, while aromaticity contributes to a decrease. In MALDI, the ion yields increase linearly with the increase of PA of amino acids with the exception of lysine. In both FAB and MALDI experiments with peptides, the presence of arginine residues is essential for producing abundant protonated peptides. In FAB, the presence of aliphatic and hydrophobic amino acids (leucine and isoleucine) increases the ion yields of protonated peptides, while some hydrophilic amino acids (aspartic acid and asparagines) decrease the ion yields. The presence of two or more arginine residues does not give higher ion yields in FAB. In MALDI, the presence of aromatic amino acids (phenylalanine and tyrosine) enhances the signals for protonated peptides. Thus, physicochemical factors of individual amino acids cooperatively affect the ion yields of protonated amino acids and peptides. These factors governing the ion yields in FAB and MALDI affect two processes, desorption and ionization, that can be considered independently.     

Acid-catalyzed cyclization of alkoxyacryloylureas to 2,4(1H,3H)pyrimidinediones

1-Phenylthymine and the carbocyclic analog of thymidine were obtained in yields of 84-87% by cyclizing the appropriate 3-methoxy-2-methylacryloylureas in dilute sulfuric acid. High yields of 1-phenylthymine also resulted when the cyclization was carried out in trifluoroacetic acid, in acetic acid containing toluenesulfonic acid (TSA), or by fusion of the urea with a catalytic amount of TSA. In comparison, the typical aqueous-alkali catalyzed cyclizations gave lower yields of the two thymines, and cleavage of the acryloylureas was shown to occur. However, cyclization in concentrated aqueous ammonia produced high yields of both thymine derivatives.     

THE PHOTOSENSITIZERS BENZOPHENOXAZINE and THIAZINES: COMPREHENSIVE INVESTIGATION OF PHOTOPHYSICAL and PHOTOCHEMICAL PROPERTIES

Eight differently substituted title dye compounds have been investigated regarding intersystem crossing, triplet state, fluorescence and singlet excited state pKa properties. In general, non-halogenated oxazines and thiazines as well as a mono bromooxazine show very low triplet quantum yields, phi tau (less than 0.03) and relatively long triplet lifetimes (approximately 40 microseconds) in acidic methanol. The phi tau data correlate well with known singlet oxygen yields. In basic methanol no triplet transient is observed but a significant yield of a ground state transient protonated (base dye) form is produced with a short lifetime, approximately 400 ns. Fluorescence can be seen simultaneously from both the excited base and the protonated base dye forms in basic methanol. For iodinated oxazine or thiazines, the triplet yield increases and can be as high as 0.5 (diiodo case) in acidic methanol. The triplet lifetimes are further shortened to approximately 10 microseconds compared to the non-iodinated derivatives above. The triplet yields of the iodo compounds are higher or equal to known singlet oxygen yields. In basic methanol triplet yields up to 0.2 can be seen, the triplet lifetime are shortened still further to 1 microsecond but no observable protonated form is produced (in distinction to the non-iodinated cases). Consideration is given to the correlation of triplet and singlet oxygen yields, ground and excited pKa properties, spin-orbit coupling and internal conversion properties, solvent effects, and phototherapeutic activity of these dyes.     

Bridged tetraquaternary salts from N,N'-polyfluoroalkyl-4,4'-bipyridine

4,4'-Bipyridine (1) with excess of polyfluoroalkyl bromide or iodides 2a-d at 100-110 degrees C without solvent gave the monoquaternary salts 3a-d in >90% yields. However, 1 with 2.5 equiv of 2a-c in DMF at 110 degrees C resulted in the diquaternary salts 5a-c in >85% yields. In DMF, 5a-c were obtained in comparable yields when a molar excess of 2a-c reacted with 3a-c. 1,4-Dibromobutane with 3a,b in DMF at 100 degrees C led to the tetraquaternary salts 7a,b in approximately 85% yields. In water or acetone/water as a solvent, salts 3a-d and 5a-c were metathesized with LiN(SO(2)CF(3))(2) and KSO(3)CF(3) to produce monoquaternary ionic liquids 4a-h in >88% yields and diquaternary ionic liquids 6a-f in >86% yields, respectively. Tetraquaternary ionic liquids 8a,b were obtained when LiN(SO(2)CF(3))(2) was reacted with salts 7a,b. These compounds were stable to 340 degrees C as determined by DSC. They are the first N-mono-, N,N'-di-, and N,N,N',N'-tetra-4,4'-polyfluoroalkylbipyridinium quaternary salts and ionic liquids.     

Donor-Acceptor Complexes in Copolymerization. XXVI. Effect of Solvent,Temperature, and Complexing Agent on the Polymerization of Comonomer Charge Transfer Complexes

The copolymerization of styrene with methyl methacrylate (S/MMA = 4/1) or acrylonitrile (S/AN = 1/1) in the presence of ethylaluminum sesquichloride (EASC) yields 1/1 copolymer in toluene or chlorobenzene. In chloroform the S-MMA-EASC polymerization yields 60/40 copolymer while the S-AN-EASC polymerization yields 1/1 copolymer. In the presence of EASC, styrene-α-chloroacrylonitrile yields 1/1 copolymer (DMF or DMSO), S-AN yields 1/1 copolymer (DMSO) or radical copolymer (DMF), S-MMA yields radical copolymer (DMF or DMSO), α-methylstyrene-AN yields radical copolymer (DMSO) or traces of copolymer (DMF), and α-MS-methacrylo-nitrile yields traces of copolymer (DMSO) or no copolymer (DMF). When zinc chloride is used as complexing agent in DMF or DMSO, none of the monomer pairs undergoes polymerization. However, radical catalyzed polymerization of isoprene-AN-ZnCl₂ in DMF yields 1/1 alternating copolymer. The copolymerization of S/MMA in the presence of EASC yields 1/1 alternating copolymer up to 100°C, while the copolymerization of S/AN deviates from 1/1 alternating copolymer above 50°C. The copolymerization of S/MMA deviates from 1/1 copolymer at MMA/EASC mole ratios above 20 while the copolymerization of S/AN deviates from 1/1 copolymer at MMA/EASC ratios above 50.     

Palladium-catalyzed microwave-assisted amination of 1-bromonaphthalenes and 5- and 8-bromoquinolines

[reaction: see text] 1-Aminonaphthalenes and 5- and 8-aminoquinolines were rapidly prepared from the respective aryl bromides in good yields by Pd-catalyzed aryl amination under microwave conditions. Consistent improvements in yields over those obtained under standard conditions were seen with quinoline substrates. In the cases where 5-bromo-8-cyanoquinoline was used as a substrate, no desired products were obtained under standard conditions with a number of different primary and secondary amines. However, microwave conditions provided the desired products in good to excellent yields.     

A simple copper salt catalysed the coupling of imidazole with arylboronic acids in protic solvent

In the presence of a catalytic amount of a simple copper salt, the coupling of imidazole with arylboronic acids was performed in methanol to give corresponding N-arylimidazoles in almost quantitative yields; this coupling reaction could also be performed in aqueous solutions to give N-arylimidazoles in excellent yields.     

Direct Monofluoromethylthiolation with S‐(Fluoromethyl) Benzenesulfonothioate

An electrophilic shelf‐stable monofluoromethylthiolating reagent S ‐(fluoromethyl) benezenesulfonothioate ( 1 ) was developed. In the presence of a copper catalyst, reagent 1 coupled with a variety of aryl boronic acids to give the corresponding monofluoromethylthiolated arenes in high yields. In addition, addition of reagent 1 to alkyl alkenes in the presence of a silver catalyst gave alkyl monofluoromethylthioethers in high yields.     

Une méthode simple et efficace de préparation de composés dicarbonylés-1,5

We describe a convenient preparation method of 1,5-dicarbonyl compounds from enol ethers, methyl vinyl ketone and boron triflouride etherate. In the presence of an alcohol, high or quantitative yields are obtained even with enol ethers of hindered ketones. In contrast without alcohol, yields are considerably lower.     

Fluorinated stannanes : Part 2. The stereospecific synthesis of fluorinated stannanes via a Barbier-type reaction between fluorinated halides and tributyltin chloride mediated by zinc or cadmium

Fluorinated stannanes are valuable synthons in synthetic organofluorine chemistry. Fluorinated vinyl, alkyl and aryl halides reacted efficiently with tri-n-butyltin chloride in the presence of zinc or cadmium to yield the corresponding stannanes in good yields. In some cases, yield of the stannanes showed a dramatic improvement over the transmetalation method. In all other cases, comparable yields were obtained.     

Enantioselective Synthesis of Chiral Oxime Ethers: Desymmetrization and Dynamic Kinetic Resolution of Substituted Cyclohexanones

Axially chiral cyclohexylidene oxime ethers exhibit unique chirality because of the restricted rotation of C=N. The first catalytic enantioselective synthesis of novel axially chiral cyclohexylidene oximes has been developed by catalytic desymmetrization of 4‐substituted cyclohexanones with O‐arylhydroxylamines and is catalyzed by a chiral BINOL‐derived strontium phosphate with excellent yields and good enantioselectivities. In addition, chiral BINOL‐derived phosphoric acid catalyzed dynamic kinetic resolution of α‐substituted cyclohexanones has been performed and yields versatile intermediates in high yields and enantioselectivities.     

THE PHOTOLYSIS OF TRYPTOPHAN IN THE PRESENCE OF OXYGEN

Abstract— Quantum yields for the destruction of tryptophan by a single 500 J flash in aqueous solution have been determined over the pH range 1–13 in both air-equilibrated and nitrogen-saturated conditions. When these quantum yields are compared with the quantum yields for radical formation and photoejection of electrons, it is found that there is good agreement only for the nitrogen-saturated case. In air-equilibrated solutions of tryptophan, there is a large disparity between the measured degradation quantum yields and those for photoejection of electrons and radical formation. Oxygen, therefore, is playing a major role in the photochemical decomposition and it is proposed that the major reaction which occurs, under normal atmospheric conditions, is the reaction of the lowest triplet excited state of tryptophan with oxygen.
Preliminary photolysis-product distributions against pH are discussed, and indicate that a total of nine major products are formed in the presence of oxygen.     

Acrylonitrile Copolymerizations. III. Flash Pyrolysis of Methyl Methacrylate and Styrene Copolymers

Flash pyrolysis of the copolymers acrylonitrile-methyl methacrylate and acrylonitrile-styrene has been carried out over the whole range of compositions, and yields of the monomers have been measured. In the first case, all of the methyl methacrylate is recovered as monomer except when a unit is isolated between two acrylonitrile segments. However, the yield in acrylonitrile monomer is lower; it corresponds to the units isolated between long sequences of methyl methacrylate plus the isolated acrylonitrile diads. The agreement between the calculated and experimental yields is excellent only if one takes into account the penultimate effects. In the second case, however, it is not possible to deduce a quantitative interpretation of the yields of either styrene or acrylonitrile monomers.     

Cage reactions in the photolysis of 2,2,4,4-tetramethyl-3-pentanone

The product quantum yields in the photolysis of 2,2,4,4-tetramethyl-3-pentanone have been measured in homogeneous solvents of different viscosities, in micellar solutions of cetyltrimethylammonium chloride and sodium dodecyl sulfate, and in dioctadecyl ammonium chloride vesicles. The product quantum yield in n-heptane was found to be 1. This value decreases to 0.5 in paraffin oil as a consequence of geminate recombination. In the presence of free radical scavengers, the extent of geminate disproportionation can be evaluated from the yields of isobutene and 2,2-dimethyl propionaldehyde. From these yields and the geminate recombination yields the total amount of geminate processes and the disproportionation-to-combination ratio for caged radicals are estimated. It is found that micelles provide the most efficient cages. In these media only about 10% of the radicals avoid cage processes. The disproportionation-to-combination ratio of tert-butyl and pivaloyl radicals was found to be extremely media dependent. The measured values ranged from about 0.2 in paraffin oil to 0.8 in cetyltrimethylammonium chloride micelles.     

Mild electrophilic trifluoromethylation of beta-ketoesters and silyl enol ethers with 5-trifluoro methyldibenzothiophenium tetrafluoroborate

Cyclic and acyclic beta-ketoesters were efficiently trifluoromethylated with 5-trifluoromethyldibenzothiophenium tetrafluoroborate in the presence of a phase-transfer catalyst to afford the corresponding alpha-substituted alpha-trifluoromethyl beta-ketoesters in good to excellent yields. In a second approach, 5-trifluoromethyldibenzothiophenium tetrafluoroborate and tetrabutylammonium difluorotriphenylstannate were used for efficient electrophilic trifluoromethylation of various silyl enol ethers leading to the corresponding alpha-trifluoromethyl ketones in good to high yields.     

Copper-catalyzed domino coupling reaction: an efficient method to synthesize oxindoles

An efficient and novel procedure for a copper catalyzed domino coupling reaction has been developed, which afforded various oxindoles in good to excellent yields with tolerance of various substituents. In addition, this method could be applied to synthesize horsfiline and coerulescine in few steps with high total yields.     

Envirocat EPZ-10: A Solid Acid Catalyst for the Synthesis of 1,8-Dioxo-octahydroxanthenes in Aqueous Medium

An efficient method for synthesis of 1,8-dioxo-octahydroxanthenes using EPZ-10 as a heterogeneous catalyst is developed. In this method, aldehydes and dimedone / cyclohexane-1,3-dione are heated at 70 °C in the presence of a catalytic amount of EPZ-10 in water as a universal solvent, affording the corresponding 1,8-dioxo-octahydroxanthenes in moderate to excellent yields. Also, domino Knoevenagel / hetero-Michael-addition reaction is described in water without any catalyst with excellent yields. The major advantages of this method are excellent yields, short reaction time, and ease of operation. This green protocol works well with dimedone as well as cyclohexane-1,3-dione.     

Tf<Subscript>2</Subscript>O-TMDS combination for the direct reductive transformation of secondary amides to aldimines,aldehydes, and/or amines

The direct partial reduction of highly stable secondary amides to more reactive aldimines and aldehydes is a challenging yet highly demanding transformation. In this context, only three methods have been reported. We report herein an improved version of the Charette’s method. Our protocol consists of activation of secondary amides with triflic anhydride/2-fluoropyridine, and partial reduction of the resulting intermediates with 1,1,3,3-tetramethyldisiloxane (TMDS), which delivered aldimines or aldehydes upon acidic hydrolysis. Aromatic amides were reduced to the corresponding aldimines in 85%–100% NMR yields, and yields (NMR) from aliphatic amides were 72%–86%. Acidic hydrolysis of the aldimine intermediates afforded, in one-pot, the corresponding aldehydes in 80%–96% yields. A simple protocol was established to isolate labile aldimines in pure form in 92%–96% yields. The improved method gave generally higher yields as compared to the known ones, and features the use of cheaper and more atom-economical TMDS as a chemoselective reducing agent. In addition, a convenient extraction protocol has been established to allow the isolation of amines, which constitutes a mild method for the N-deacylation of amides, another highly desirable transformation. The extended method retains the advantages of the original method of Charette in terms of mild conditions, good functional group tolerance, and excellent chemoselectivity.     

Copper iodide-catalyzed cyclization of (Z)-chalcogenoenynes

We present here our results of the efficient copper-catalyzed cyclizations of chalcogenoenynes and establish a route to obtain 3-substituted chalcogenophenes in good to excellent yields. In addition, the obtained chalcogenophenes were readily transformed to more complex products using the palladium-catalyzed cross-coupling reactions with boronic acids to give Suzuki-type products in good yields.     

Steam pretreatment of Salix with and without SO2 impregnation for production of bioethanol

In the wood-to-ethanol process, pretreatment of the material is necessary prior to enzymatic hydrolysis to obtain high overall yields of sugar and ethanol. Steam pretreatment of fast-growing Salix either with or without SO₂ impregnation has been investigated by varying different parameters. Overall glucose yields of above 90% and overall xylose yields higher than 80% were obtained both with and without impregnation. However, the most favorable pretreatment conditions for the separate yields of glucose and xylose differed to a lower degree using SO₂-impregnated wood chips, resulting in higher total sugar yield than that obtained with non-impregnated wood chips.