5' modification of duplex DNA with a ruthenium electron donor-acceptor pair using solid-phase DNA synthesis

Incorporation of metalated nucleosides into DNA through covalent modification is crucial to measurement of thermal electron-transfer rates and the dependence of these rates with structure, distance, and position. Here, we report the first synthesis of an electron donor-acceptor pair of 5' metallonucleosides and their subsequent incorporation into oligonucleotides using solid-phase DNA synthesis techniques. Large-scale syntheses of metal-containing oligonucleotides are achieved using 5' modified phosporamidites containing [Ru(acac)(2)(IMPy)](2+) (acac is acetylacetonato; IMPy is 2'-iminomethylpyridyl-2'-deoxyuridine) (3) and [Ru(bpy)(2)(IMPy)](2+) (bpy is 2,2'-bipyridine; IMPy is 2'-iminomethylpyridyl-2'-deoxyuridine) (4). Duplexes formed with the metal-containing oligonucleotides exhibit thermal stability comparable to the corresponding unmetalated duplexes (T(m) of modified duplex = 49 degrees C vs T(m) of unmodified duplex = 47 degrees C). Electrochemical (3, E(1/2) = -0.04 V vs NHE; 4, E(1/2) = 1.12 V vs NHE), absorption (3, lambda(max) = 568, 369 nm; 4, lambda(max) = 480 nm), and emission (4, lambda(max) = 720 nm, tau = 55 ns, Phi = 1.2 x 10(-)(4)) data for the ruthenium-modified nucleosides and oligonucleotides indicate that incorporation into an oligonucleotide does not perturb the electronic properties of the ruthenium complex or the DNA significantly. In addition, the absence of any change in the emission properties upon metalated duplex formation suggests that the [Ru(bpy)(2)(IMPy)](2+)[Ru(acac)(2)(IMPy)](2+) pair will provide a valuable probe for DNA-mediated electron-transfer studies.     

Enhancement of metal-metal coupling at a considerable distance by using 4-pyridinealdazine as a bridging ligand in polynuclear complexes of rhenium and ruthenium

Novel polynuclear complexes of rhenium and ruthenium containing PCA (PCA = 4-pyridinecarboxaldehyde azine or 4-pyridinealdazine or 1,4-bis(4-pyridyl)-2,3-diaza-1,3-butadiene) as a bridging ligand have been synthesized as PF(6-) salts and characterized by spectroscopic, electrochemical, and photophysical techniques. The precursor mononuclear complex, of formula [Re(Me(2)bpy)(CO)(3)(PCA)](+) (Me(2)bpy = 4,4'-dimethyl-2,2'-bipyridine), does not emit at room temperature in CH(3)CN, and the transient spectrum found by flash photolysis at lambda(exc) = 355 nm can be assigned to a MLCT (metal-to-ligand charge transfer) excited state [(Me(2)bpy)(CO)(3)Re(II)(PCA(-))](+), with lambda(max) = 460 nm and tau < 10 ns. The spectral properties of the related complexes [[Re(Me(2)bpy)(CO)(3)}(2)(PCA)](2+), [Re(CO)(3)(PCA)(2)Cl], and [Re(CO)(3)Cl](3)(PCA)(4) confirm the existence of this low-energy MLCT state. The dinuclear complex, of formula [(Me(2)bpy)(CO)(3)Re(I)(PCA)Ru(II)(NH(3))(5)](3+), presents an intense absorption in the visible spectrum that can be assigned to a MLCT d(pi)(Ru) --> pi(PCA); in CH(3)CN, the value of lambda (max) = 560 nm is intermediate between those determined for [Ru(NH(3))(5)(PCA)](2+) (lambda(max) = 536 nm) and [(NH(3))(5)Ru(PCA)Ru(NH(3))(5)](4+) (lambda(max) = 574 nm), indicating a significant decrease in the energy of the pi-orbital of PCA. The mixed-valent species, of formula [(Me(2)bpy)(CO)(3)Re(I)(PCA)Ru(III)(NH(3))(5)](4+), was obtained in CH(3)CN solution, by bromine oxidation or by controlled-potential electrolysis at 0.8 V in a OTTLE cell of the [Re(I),Ru(II)] precursor; the band at lambda(max) = 560 nm disappears completely, and a new band appears at lambda(max) = 483 nm, assignable to a MMCT band (metal-to-metal charge transfer) Re(I) --> Ru(III). By using the Marcus-Hush formalism, both the electronic coupling (H(AB)) and the reorganization energy (lambda) for the metal-to-metal intramolecular electron transfer have been calculated. Despite the considerable distance between both metal centers (approximately 15.0 Angstroms), there is a moderate coupling that, together with the comproportionation constant of the mixed-valent species [(NH(3))(5)Ru(PCA)Ru(NH(3))(5)](5+) (K(c) approximately 10(2), in CH(3)CN), puts into evidence an unusual enhancement of the metal-metal coupling in the bridged PCA complexes. This effect can be accounted for by the large extent of "metal-ligand interface", as shown by DFT calculations on free PCA. Moreover, lambda is lower than the driving force -DeltaG degrees for the recombination charge reaction [Re(II),Ru(II)] --> [Re(I),Ru(III)] that follows light excitation of the mixed-valent species. It is then predicted that this reverse reaction falls in the Marcus inverted region, making the heterodinuclear [Re(I),Ru(III)] complex a promising model for controlling the efficiency of charge-separation processes.     

Comparison of Physical and Photophysical Properties of Monometallic and Bimetallic Ruthenium(II) Complexes Containing Structurally Altered Diimine Ligands

The physical and photophysical properties of a series of monometallic, [Ru(bpy)(2)(dmb)](2+), [Ru(bpy)(2)(BPY)](2+), [Ru(bpy)(Obpy)](2+) and [Ru(bpy)(2)(Obpy)](2+), and bimetallic, [{Ru(bpy)(2)}(2)(BPY)](4+) and [{Ru(bpy)(2)}(2)(Obpy)](4+), complexes are examined, where bpy is 2,2'-bipyridine, dmb is 4,4'-dimethyl-2,2'-bipyridine, BPY is 1,2-bis(4-methyl-2,2'-bipyridin-4'-yl)ethane, and Obpy is 1,2-bis(2,2'-bipyridin-6-yl)ethane. The complexes display metal-to-ligand charge transfer transitions in the 450 nm region, intraligand pi --> pi transitions at energies greater than 300 nm, a reversible oxidation of the ruthenium(II) center in the 1.25-1.40 V vs SSCE region, a series of three reductions associated with each coordinated ligand commencing at -1.3 V and ending at approximately -1.9 V, and emission from a (3)MLCT state having energy maxima between 598 and 610 nm. The Ru(III)/Ru(II) oxidation of the two bimetallic complexes is a single, two one-electron process. Relative to [Ru(bpy)(2)(BPY)](2+), the Ru(III)/Ru(II) potential for [Ru(bpy)(2)(Obpy)](2+) increases from 1.24 to 1.35 V, the room temperature emission lifetime decreases from 740 to 3 ns, and the emission quantum yield decreases from 0.078 to 0.000 23. Similarly, relative to [{Ru(bpy)(2)}(2)(BPY)](4+), the Ru(III)/Ru(II) potential for [{Ru(bpy)(2)}(2)(Obpy)](4+) increases from 1.28 to 1.32 V, the room temperature emission lifetime decreases from 770 to 3 ns, and the room temperature emission quantum yield decreases from 0.079 to 0.000 26. Emission lifetimes measured in 4:1 ethanol:methanol were temperature dependent over 90-360 K. In the fluid environment, emission lifetimes display a biexponential energy dependence ranging from 100 to 241 cm(-)(1) for the first energy of activation and 2300-4300 cm(-)(1) for the second one. The smaller energy is attributed to changes in the local matrix of the chromophores and the larger energy of activation to population of a higher energy dd state. Explanations for the variations in physical properties are based on molecular mechanics calculations which reveal that the Ru-N bond distance increases from 2.05 ? (from Ru(II) to bpy and BPY) to 2.08 ? (from Ru(II) to Obpy) and that the metal-to-metal distance increases from approximately 7.5 ? for [{Ru(bpy)(2)}(2)(Obpy)](4+) to approximately 14 ? for [{Ru(bpy)(2)}(2)(BPY)](4+).     

Electrochemiluminescent peptide nucleic acid-like monomers containing Ru(II)-dipyridoquinoxaline and Ru(II)-dipyridophenazine complexes

A series of Ru(II)-peptide nucleic acid (PNA)-like monomers, [Ru(bpy)(2)(dpq-L-PNA-OH)](2+) (M1), [Ru(phen)(2)(dpq-L-PNA-OH)](2+) (M2), [Ru(bpy)(2)(dppz-L-PNA-OH)](2+) (M3), and [Ru(phen)(2)(dppz-L-PNA-OH)](2+) (M4) (bpy = 2,2'-bipyridine, phen = 1,10-phenanthroline, dpq-L-PNA-OH = 2-(N-(2-(((9H-fluoren-9-yl)methoxy)carbonylamino)ethyl)-6-(dipyrido[3,2-a:2',3'-c]phenazine-11-carboxamido)hexanamido)acetic acid, dppz-L-PNA-OH = 2-(N-(2-(((9H-fluoren-9-yl) methoxy)carbonylamino)ethyl)-6-(dipyrido[3,2-f:2',3'-h]quinoxaline-2-carboxamido)acetic acid) have been synthesized and characterized by IR and (1)H NMR spectroscopy, mass spectrometry, and elemental analysis. As is typical for Ru(II)-tris(diimine) complexes, acetonitrile solutions of these complexes (M1-M4) show MLCT transitions in the 443-455 nm region and emission maxima at 618, 613, 658, and 660 nm, respectively, upon photoexcitation at 450 nm. Changes in the ligand environment around the Ru(II) center are reflected in the luminescence and electrochemical response obtained from these monomers. The emission intensity and quantum yield for M1 and M2 were found to be higher than for M3 and M4. Electrochemical studies in acetonitrile show the Ru(II)-PNA monomers to undergo a one-electron redox process associated with Ru(II) to Ru(III) oxidation. A positive shift was observed in the reversible redox potentials for M1-M4 (962, 951, 936, and 938 mV, respectively, vs Fc(0/+) (Fc = ferrocene)) in comparison with [Ru(bpy)(3)](2+) (888 mV vs Fc(0/+)). The ability of the Ru(II)-PNA monomers to generate electrochemiluminescence (ECL) was assessed in acetonitrile solutions containing tripropylamine (TPA) as a coreactant. Intense ECL signals were observed with emission maxima for M1-M4 at 622, 616, 673, and 675 nm, respectively. At an applied potential sufficiently positive to oxidize the ruthenium center, the integrated intensity for ECL from the PNA monomers was found to vary in the order M1 (62%) > M3 (60%) > M4 (46%) > M2 (44%) with respect to [Ru(bpy)(3)](2+) (100%). These findings indicate that such Ru(II)-PNA bioconjugates could be investigated as multimodal labels for biosensing applications.     

Eilatin complexes of ruthenium and osmium. synthesis, electrochemical behavior, and near-IR luminescence

The synthesis and characterization of new Ru(II) and Os(II) complexes of the ligand eilatin (1) are described. The new complexes [Ru(bpy)(eil)(2)](2+) (2), [Ru(eil)(3)](2+) (3), and [Os(eil)(3)](2+) (4) (bpy = 2,2'-bipyridine; eil = eilatin) were synthesized and characterized by NMR, fast atom bombardment mass spectrometry, and elemental analysis. In the series of complexes [Ru(bpy)(x)(eil)(y)()](2+) (x + y = 3), the effect of sequential substitution of eil for bpy on the electrochemical and photophysical properties was examined. The absorption spectra of the complexes exhibit several bpy- and eil-associated pi-pi and metal-to-ligand charge-transfer (MLCT) transitions in the visible region (400-600 nm), whose energy and relative intensity depend on the number of ligands bound to the metal center (x and y). On going from [Ru(bpy)(2)(eil)](2+) (5) to 2 to 3, the d(pi)(Ru) --> pi(eil) MLCT transition undergoes a red shift from 583 to 591 to 599 nm, respectively. Electrochemical measurements performed in dimethyl sulfoxide reveal several ligand-based reduction processes, where each eil ligand can accept up to two electrons at potentials that are significantly anodically shifted (by ca. 1 V) with respect to the bpy ligands. The complexes exhibit near-IR emission (900-1100 nm) of typical (3)MLCT character, both at room temperature and at 77 K. Along the series 5, 2, and 3, upon substitution of eil for bpy, the emission maxima undergo a blue shift and the quantum yields and lifetimes increase. The radiative and nonradiative processes that contribute to deactivation of the excited level are discussed in detail.     

Ruthenium(II) complexes with the mixed ligands 2,2'-bipyridine and 4,4'-dialkyl ester-2,2'-bipyridine as pure red dopants for a single-layer electrophosphorescent device

The mixed-ligand polypyridine ruthenium(II) complexes, [Ru(bpy)(2)(dmeb)](2+)(PF(6)(-))(2) (Ru(dmeb)(2+)) and [Ru(bpy)(2)(dbeb)](2+)(PF(6)(-))(2) (Ru(dbeb)(2+)), where bpy is bipyridine, dmeb is 4,4'-dimethyl ester-2,2'-bipyridine, and dbeb is 4,4'-dibutyl ester-2,2'-bipyridine, are synthesized and characterized, and their spectroscopic, electrochemical, and electroluminescent properties are reported. Both Ru(II) complexes showed strong emission from the triplet metal-to-ligand charge-transfer excited state, red-shifted emission spectra (lambda(max) = 642 nm), and good solubility in organic solvents compared to the frequently used tris(bipyridine) Ru(II) complexes. The electrochemical measurements for these Ru complexes showed reversible and quasi-reversible redox processes, implying a potential improvement in the stability of the electroluminescent device. The electrophosphorescent devices were fabricated by doping them in a polymer host using a simple solution spin-coating technique. For a single-layer device with the 1.0 wt % Ru(dbeb)(2+)-doped polymer blends of poly(vinylcarbazole) (PVK) and 2-tert-butylphenyl-5-biphenyl-1,3,4-oxadiazol (PBD) as the emitting layer and with the metal Ba as the cathode, an external quantum efficiency of 3.0%, a luminous efficiency of 2.4 cd/A, and a maximum brightness of 935 cd/m(2) are reached with an electroluminescence (EL) spectral peak at 640 nm and Commission Internationale de L'Eclairage chromaticity coordinates of x = 0.64 and y = 0.33, which were comparable with standard red color.     

DNA mismatch detection by resonance energy transfer between ruthenium(II) and osmium(II) tris(2,2'-bipyridyl) chromophores

Octahedral tris-chelate complexes [M(II)(bpy)(3)](2+) (M = Ru or Os, bpy = 2,2'-bipyridyl), covalently attached to the 3'- and 5'-phosphates of two oligonucleotides, are juxtaposed when hybridized contiguously to a fully complementary DNA target. Visible metal-to-ligand charge-transfer (MLCT) excitation of the [Ru(II)(bpy)(3)](2+) unit leads to resonance energy transfer to the MLCT state of the [Os(II)(bpy)(3)](2+) moiety, with the energy transfer efficiency depending on the degree of hybridization. The extent of attenuation of the intense red luminescence from the Ru(II) chromophore hence allows highly sensitive structural probing of the assembly and constitutes a novel approach to DNA sensing which is capable of detecting mutations.     

Mononuclear and dinuclear complexes of dibenzoeilatin: synthesis, structure, and electrochemical and photophysical properties

This work describes a study of Ru(II) and Os(II) polypyridyl complexes of the symmetrical, fused-aromatic bridging ligand dibenzoeilatin (1). The synthesis, purification, and structural characterization by NMR of the mononuclear complexes [Ru(bpy)(2)(dbneil)](2+) (2), [Ru(tmbpy)(2)(dbneil)](2+) (3), and [Os(bpy)(2)(dbneil)](2+) (4), the homodinuclear complexes [[Ru(bpy)(2)](2)[micro-dbneil]](4+) (5), [[Ru(tmbpy)(2)](2)[micro-dbneil]](4+) (6), and [[Os(bpy)(2)](2)[micro-dbneil]](4+) (7), and the heterodinuclear complex [[Ru(bpy)(2)][micro-dbneil][Os(bpy)(2)]](4+) (8) are described, along with the crystal structures of 4, 6, and 7. Absorption spectra of the mononuclear complexes feature a low-lying MLCT band around 600 nm. The coordination of a second metal fragment results in a dramatic red shift of the MLCT band to beyond 700 nm. Cyclic and square wave voltammograms of the mononuclear complexes exhibit one reversible metal-based oxidation, as well as several ligand-based reduction waves. The first two reductions, attributed to reduction of the dibenzoeilatin ligand, are substantially anodically shifted compared to [M(bpy)(3)](2+) (M = Ru, Os), consistent with the low-lying pi orbital of dibenzoeilatin. The dinuclear complexes exhibit two reversible, well-resolved, metal-centered oxidation waves, despite the chemical equivalence of the two metal centers, indicating a significant metal-metal interaction mediated by the conjugated dibenzoeilatin ligand. Luminescence spectra, quantum yield, and lifetime measurements at room temperature in argon-purged acetonitrile have shown that the complexes exhibit (3)MLCT emission, which occurs in the IR-region between 950 and 1300 nm. The heterodinuclear complex 8 exhibits luminescence only from the Ru-based fragment, the intensity of which is less than 1% of that observed in the corresponding homodinuclear complex 5; no emission from the Os-based unit is observed, and an intramolecular quenching constant of k(q) > or = 3 x10(9) s(-)(1) is evaluated. The nature of the quenching process is briefly discussed.     

Surface confinement and its effects on the luminescence quenching of a ruthenium-containing metallopolymer

Luminescence quenching of the metallopolymers [Ru(bpy)(2)(PVP)(10)](2+) and [Ru(bpy)(2)(PVP)(10)Os(bpy)(2)](4+), both in solution and as thin films, is reported, where bpy is 2,2'-bipyridyl and PVP is poly(4-vinylpyridine). When the metallopolymer is dissolved in ethanol, quenching of the ruthenium excited state, Ru(2+*), within [Ru(bpy)(2)(PVP)(10)](2+) by [Os(bpy)(3)](2+) proceeds by a dynamic quenching mechanism and the rate constant is (1.1 +/- 0.1) x 10(11) M(-1) s(-1). This quenching rate is nearly two orders of magnitude larger than that found for quenching of monomeric [Ru(bpy)(3)](2+) under the same conditions. This observation is interpreted in terms of an energy transfer quenching mechanism in which the high local concentration of ruthenium luminophores leads to a single [Os(bpy)(3)](2+) centre quenching the emission of several ruthenium luminophores. Amplifications of this kind will lead to the development of more sensitive sensors based on emission quenching. Quenching by both [Os(bpy)(3)](2+) and molecular oxygen is significantly reduced within a thin film of the metallopolymer. Significantly, in both optically driven emission and electrogenerated chemiluminescence, emission is observed from both ruthenium and osmium centres within [Ru(bpy)(2)(PVP)(10)Os(bpy)(2)](4+) films, i.e. the ruthenium emission is not quenched by the coordinated [Os(bpy)(2)](2+) units. This observation opens up new possibilities in multi-analyte sensing since each luminophore can be used to detect separate analytes, e.g. guanine and oxoguanine.     

Bis(amido)ruthenium(IV) Complexes with 2,3-Diamino-2,3-dimethylbutane. Crystal Structure and Reversible Ru(IV)-Amide/Ru(III)-Amine and Ru(IV)-Amide/Ru(II)- Amine Redox Couples in Aqueous Solution

Two bis(amido)ruthenium(IV) complexes, [Ru(IV)(bpy)(L-H)(2)](2+) and [Ru(IV)(L)(L-H)(2)](2+) (bpy = 2,2'-bipyridine, L = 2,3-diamino-2,3-dimethylbutane, L-H = (H(2)NCMe(2)CMe(2)NH)(-)), were prepared by chemical oxidation of [Ru(II)(bpy)(L)(2)](2+) and the reaction of [(n-Bu)(4)N][Ru(VI)NCl(4)] with L, respectively. The structures of [Ru(bpy)(L-H)(2)][ZnBr(4)].CH(3)CN and [Ru(L)(L-H)(2)]Cl(2).2H(2)O were determined by X-ray crystal analysis. [Ru(bpy)(L-H)(2)][ZnBr(4)].CH(3)CN crystallizes in the monoclinic space group P2(1)/n with a = 12.597(2) ?, b = 15.909(2) ?, c = 16.785(2) ?, beta = 91.74(1) degrees, and Z = 4. [Ru(L)(L-H)(2)]Cl(2).2H(2)O crystallizes in the tetragonal space group I4(1)/a with a = 31.892(6) ?, c = 10.819(3) ?, and Z = 16. In both complexes, the two Ru-N(amide) bonds are cis to each other with bond distances ranging from 1.835(7) to 1.856(7) ?. The N(amide)-Ru-N(amide) angles are about 110 degrees. The two Ru(IV) complexes are diamagnetic, and the chemical shifts of the amide protons occur at around 13 ppm. Both complexes display reversible metal-amide/metal-amine redox couples in aqueous solution with a pyrolytic graphite electrode. Depending on the pH of the media, reversible/quasireversible 1e(-)-2H(+) Ru(IV)-amide/Ru(III)-amine and 2e(-)-2H(+) Ru(IV)-amide/Ru(II)-amine redox couples have been observed. At pH = 1.0, the E degrees is 0.46 V for [Ru(IV)(bpy)(L-H)(2)](2+)/[Ru(III)(bpy)(L)(2)](3+) and 0.29 V vs SCE for [Ru(IV)(L)(L-H)(2)](2+)/[Ru(III)(L)(3)](3+). The difference in the E degrees values for the two Ru(IV)-amide complexes has been attributed to the fact that the chelating saturated diamine ligand is a better sigma-donor than 2,2'-bipyridine.     

Electrochemiluminescent monomers for solid support syntheses of Ru(II)-PNA bioconjugates: multimodal biosensing tools with enhanced duplex stability

The feasibility of devising a solid support mediated approach to multimodal Ru(II)-peptide nucleic acid (PNA) oligomers is explored. Three Ru(II)-PNA-like monomers, [Ru(bpy)(2)(Cpp-L-PNA-OH)](2+) (M1), [Ru(phen)(2)(Cpp-L-PNA-OH)](2+) (M2), and [Ru(dppz)(2)(Cpp-L-PNA-OH)](2+) (M3) (bpy = 2,2'-bipyridine, phen = 1,10-phenanthroline, dppz = dipyrido[3,2-a:2',3'-c]phenazine, Cpp-L-PNA-OH = [2-(N-9-fluorenylmethoxycarbonyl)aminoethyl]-N-[6-(2-(pyridin-2yl)pyrimidine-4-carboxamido)hexanoyl]-glycine), have been synthesized as building blocks for Ru(II)-PNA oligomers and characterized by IR and (1)H NMR spectroscopy, mass spectrometry, electrochemistry and elemental analysis. As a proof of principle, M1 was incorporated on the solid phase within the PNA sequences H-g-c-a-a-t-a-a-a-a-Lys-NH(2) (PNA1) and H-P-K-K-K-R-K-V-g-c-a-a-t-a-a-a-a-lys-NH(2) (PNA4) to give PNA2 (H-g-c-a-a-t-a-a-a-a-M1-lys-NH(2)) and PNA3 (H-P-K-K-K-R-K-V-g-c-a-a-t-a-a-a-a-M1-lys-NH(2)), respectively. The two Ru(II)-PNA oligomers, PNA2 and PNA3, displayed a metal to ligand charge transfer (MLCT) transition band centered around 445 nm and an emission maximum at about 680 nm following 450 nm excitation in aqueous solutions (10 mM PBS, pH 7.4). The absorption and emission response of the duplexes formed with the cDNA strand (DNA: 5'-T-T-T-T-T-T-T-A-T-T-G-C-T-T-T-3') showed no major variations, suggesting that the electronic properties of the Ru(II) complexes are largely unaffected by hybridization. The thermal stability of the PNA·DNA duplexes, as evaluated from UV melting experiments, is enhanced compared to the corresponding nonmetalated duplexes. The melting temperature (T(m)) was almost 8 °C higher for PNA2·DNA duplex, and 4 °C for PNA3·DNA duplex, with the stabilization attributed to the electrostatic interaction between the cationic residues (Ru(II) unit and positively charged lysine/arginine) and the polyanionic DNA backbone. In presence of tripropylamine (TPA) as co-reactant, PNA2, PNA3, PNA2·DNA and PNA3·DNA displayed strong electrochemiluminescence (ECL) signals even at submicromolar concentrations. Importantly, the combination of spectrochemical, thermal and ECL properties possessed by the Ru(II)-PNA sequences offer an elegant approach for the design of highly sensitive multimodal biosensing tools.     

cis-Bis(bipyridine)ruthenium Imidazole Derivatives: A Spectroscopic, Kinetic, and Structural Study

The ruthenium bis(bipyridine) complexes cis-[Ru(bpy)(2)Im(OH(2))](2+), cis-[Ru(bpy)(2)(Im)(2)](2+), cis-[Ru(bpy)(2)(N-Im)(2)](2+), cis-[Ru(dmbpy)(2)Im(OH(2))](2+), cis-[Ru(dmbpy)(2)(N-Im)(OH(2))](2+)(bpy = 2,2'-bipyridine, dmbpy = 4,4'-dimethyl-2,2'-bipyridine, Im = imidazole, N-Im = N-methylimidazole), have been synthesized under ambient conditions in aqueous solution (pH 7). Their electrochemical and spectroscopic properties, absorption, emission, and lifetimes were determined and compared. The substitution kinetics of the cis-[Ru(bpy)(2)Im(OH(2))](2+) complexes show slower rates and have lower affinities for imidazole ligands than the corresponding cis-[Ru(NH(3))(4)Im(OH(2))](2+) complexes. The crystal structures of the monoclinic cis-[Ru(bpy)(2)(Im)(2)](BF(4))(2), space group = P2(1)/a, Z = 4, a = 11.344(1) ?, b = 17.499(3) ?, c = 15.114(3) ?, and beta = 100.17(1) degrees, and triclinic cis-[Ru(bpy)(2)(N-Im)(H(2)O)](CF(3)COO)(2).H(2)O, space group = P&onemacr;, Z = 2, a = 10.432(4) ?, b = 11.995(3) ?, c = 13.912(5) ?, alpha = 87.03(3) degrees, beta = 70.28(3) degrees, and gamma = 71.57(2) degrees, complexes show that these molecules crystallize as complexes of octahedral Ru(II) to two bidentate bipyridine ligands with two imidazole ligands or a water and an N-methylimidazole ligand cis to each other. The importance of these molecules is associated with their frequent use in the modification of proteins at histidine residues and in comparisons of the modified protein derivatives with these small molecule analogs.     

Changing the role of 2,2'-bipyridine from secondary ligand to protagonist in [Ru(bpy)2(N-N)]2+ complexes: low-energy, red emission from a ruthenium(II)-to-2,2'-bipyridine 3MLCT state

Two new bidentate ligands (1 and 2) with bicyclic guanidine moieties were synthesized and attached to a Ru(II)(bpy)(2) core (bpy = 2,2'-bipyridine) to afford complexes 3 and 4, which were characterized by spectroscopic and electrochemical methods. Complex 4 was further characterized by X-ray crystallography. In cyclic voltammetric studies, both complexes show a Ru(II/III) couple, which is 500 mV less positive than the Ru(II/III) couple of Ru(bpy)(3)(2+). The (1)MLCT and (3)MLCT states of 3 (560 nm/745 nm) and 4 (550 nm/740 nm) are significantly red-shifted with respect to Ru(bpy)(3)(2+) (440 nm/620 nm). Compounds 3 and 4 exhibit emission from a Ru(II)-to-bpy (3)MLCT state, which is rarely the emitting state at λ > 700 nm in [Ru(bpy)(2)(N-N)](2+) complexes.     

Preparation and multicolor electrochromic performance of a WO3/tris(2,2'-bipyridine)ruthenium(II)/polymer hybrid film

A tungsten trioxide (WO(3))/tris(2,2'-bipyridine)ruthenium(II) ([Ru(bpy)(3)](2+); bpy=2,2'-bipyridine)/poly(sodium 4-styrenesulfonate) (PSS) hybrid film was prepared by electrodeposition from a colloidal triad solution containing peroxotungstic acid (PTA), [Ru(bpy)(3)](2+), and PSS. A binary solution of [Ru(bpy)(3)](2+) and PTA (30 vol % ethanol in water) gradually gave an orange precipitate, possibly caused by the electrostatic interaction between the cationic [Ru(bpy)(3)](2+) and the anionic PTA. The addition of PSS to the binary PTA/[Ru(bpy)(3)](2+) solution remarkably suppressed this precipitation and caused a stable, colloidal triad solution to form. The spectrophotometric measurements and lifetime analyses of the photoluminescence from the excited [Ru(bpy)(3)](2+) ion in the colloidal triad solution suggested that the [Ru(bpy)(3)](2+) ion is partially shielded from electrostatic interaction with anionic PTA by the anionic PSS polymer chain. The formation of the colloidal triad made the ternary [Ru(bpy)(3)](2+)/PTA/PSS solution much more redox active. Consequently, the rate of electrodeposition of WO(3) from PTA increased appreciably by the formation of the colloidal triad, and fast electrodeposition is required for the unique preparation of this hybrid film. The absorption spectrum of the [Ru(bpy)(3)](2+) ion in the film was close to its spectrum in water, but the photoexcited state of the [Ru(bpy)(3)](2+) ion was found to be quenched completely by the presence of WO(3) in the hybrid film. The cyclic voltammogram (CV) of the hybrid film suggested that the [Ru(bpy)(3)](2+) ion performs as it is adsorbed onto WO(3) during the electrochemical oxidation. An ohmic contact between the [Ru(bpy)(3)](2+) ion and the WO(3) surface could allow the electrochemical reaction of adsorbed [Ru(bpy)(3)](2+). The composition of the hybrid film, analyzed by electron probe microanalysis (EPMA), suggested that the positive charge of the [Ru(bpy)(3)](2+) ion could be neutralized by partially reduced WO(3)(-) ions, in addition to Cl(-) and PSS units, based on the charge balance in the film. The electrostatic interaction between the WO(3)(-) ion and the [Ru(bpy)(3)](2+) ion might be responsible for forming the electron transfer channel that causes the complete quenching of the photoexcited [Ru(bpy)(3)](2+) ion, as well as the formation of the ohmic contact between the [Ru(bpy)(3)](2+) ion and WO(3). A multicolor electrochromic performance of the WO(3)/[Ru(bpy)(3)](2+)/PSS hybrid film was observed, in which transmittances at 459 and 800 nm could be changed, either individually or at once, by the selection of a potential switch. Fast responses, of within a few seconds, to these potential switches were exhibited by the electrochromic hybrid film.     

Entrapment of [Ru(bpy)3]2+ in the anionic metal-organic framework: novel photoluminescence behavior exhibiting dual emission at room temperature

[Ru(bpy)(3)](2+) (bpy = 2,2'-bipyridine) ions were entrapped into the cavities of two-dimensional anionic sheet-like coordination polymeric networks of [M(dca)(3)](-) (dca = dicyanamide; M = Mn(II) and Fe(II)). The prepared compounds, {[Ru(bpy)(3)][Mn(dca)(3)](2)}(n) (1) and {[Ru(bpy)(3)][Fe(dca)(3)](2)}(n) (2), were structurally characterized by X-ray single crystal analysis. The spectroscopic properties of the [Ru(bpy)(3)](2+) ion dramatically changed on its entrapment in [M(dca)(3)](-). The [Ru(bpy)(3)](2+) moiety present in 1 and 2 exhibits novel dual photo-emission at room temperature.     

Self assembled composites of luminescent Ru(II) metallopolymers and the Dawson polyoxometalate α-[Mo18O54(SO4)2]4-

The interaction of two luminescent metallopolymers; [Ru(bpy)(2)(PVP)(10)](2+) and [Ru(bpy)(2)(CAIP)co-poly(7)](+), where bpy is 2,2'-bipyridyl, PVP is polyvinylpyridine, and (CAIP)co-poly(7) is poly(styrene(6)-co-p-(aminomethyl)styrene) amide linked to 2-(4-carboxyphenyl)imidazo[4,5-f] [1,10]phenanthroline, with the Dawson polyoxomolybdate α-[Mo(18)O(54)(SO(4))(2)](4-) is described. Both metallopolymers undergo electrostatic association with the polyoxometalate. From both electronic and luminescence spectroscopy the thermodynamic products were determined to be {[Ru(bpy)(2)(PVP)(10)](4.5)[Mo(18)O(54)(SO(4))(2)]}(5+) and {[Ru(bpy)(2)(CAIP)co-poly(7)](5)[Mo(18)O(54)(SO(4))(2)]}(+), i.e. in both instances, the number of ruthenium centres in the cluster exceeds the number required for charge neutralization of the molybdate centre. Association quenches the luminescence of the metallopolymer although, consistent with the excess of Ru(ii) present in the associated composites, emission is not completely extinguished even when a large excess of [Mo(18)O(54)(SO(4))(2)](4-) is present. The observed emission lifetime was not affected by [Mo(18)O(54)(SO(4))(2)](4-) therefore quenching was deemed static. The luminescent intensity data was found to fit best to a (sphere of action) Perrin model from which the radii of the quenching were calculated as 4.6 ? and 5.8 ? for [Ru(bpy)(2)(PVP)(10)](2+) and [Ru(bpy)(2)(CAIP co-poly)(7)](+) respectively. Both UV/Vis and resonance Raman data indicate the presence of a new optical transition centered around 490 nm for the composite, {[Ru(bpy)(2)(PVP)(10)](4.5)[Mo(18)O(54)(SO(4))(2)]}(5+) but not for {[Ru(bpy)(2)(CAIP)co-poly(7)](5)[Mo(18)O(54)(SO(4))(2)]}(+). This indicates strong electronic interaction between the metal centres in the former composite, which despite good thermodynamic analogy, is not observed for {[Ru(bpy)(2)(CAIP)co-poly(7)](5)[Mo(18)O(54)(SO(4))(2)]}(+). These results are consistent with photoelectrochemical studies of layer by layer assemblies of these films which indicate that the ruthenium centre sensitizes polyoxometalate photo-oxidation of benzyl alcohol in {[Ru(bpy)(2)(PVP)(10)](4.5)[Mo(18)O(54)(SO(4))(2)]}(5+) but not in {[Ru(bpy)(2)(CAIP)co-poly(7)](5)[Mo(18)O(54)(SO(4))(2)]}(+).     

Reactions of acetonitrile coordinated to a nitrosylruthenium complex with H2O or CH(3)OH under mild conditions: structural characterization of imido-type complexes

The reaction of cis-[Ru(NO)(CH(3)CN)(bpy)(2)](3+) (bpy = 2,2'-bipyridine) in H(2)O at room temperature proceeded to afford two new nitrosylruthenium complexes. These complexes have been identified as nitrosylruthenium complexes containing the N-bound methylcarboxyimidato ligand, cis-[Ru(NO)(NH=C(O)CH(3))(bpy)(2)](2+), and methylcarboxyimido acid ligand, cis-[Ru(NO)(NH=C(OH)CH(3))(bpy)(2)](3+), formed by an electrophilic reaction at the nitrile carbon of the acetonitrile coordinated to the ruthenium ion. The X-ray structure analysis on a single crystal obtained from CH(3)CN-H(2)O solution of cis-[Ru(NO)(NH=C(O)CH(3))(bpy)(2)](PF(6))(3) has been performed: C(22)H(20.5)N(6)O(2)P(2.5)F(15)Ru, orthorhombic, Pccn, a = 15.966(1) A, b = 31.839(1) A, c = 11.707(1) A, V = 5950.8(4) A(3), and Z = 8. The structural results revealed that the single crystal consisted of 1:1 mixture of cis-[Ru(NO)(NH=C(O)CH(3))(bpy)(2)](2+) and cis-[Ru(NO)(NH=C(OH)CH(3))(bpy)(2)](3+) and the structural formula of this single crystal was thus [Ru(NO)(NH=C(OH(0.5))CH(3))(bpy)(2)](PF(6))(2.5). The reaction of cis-[Ru(NO)(CH(3)CN)(bpy)(2)](3+) in dry CH(3)OH-CH(3)CN at room temperature afforded a nitrosylruthenium complex containing the methyl methylcarboxyimidate ligand, cis-[Ru(NO)(NH=C(OCH(3))CH(3))(bpy)(2)](3+). The structure has been determined by X-ray structure analysis: C(25)H(29)N(8)O(18)Cl(3)Ru, monoclinic, P2(1)/c, a = 13.129(1) A, b = 17.053(1) A, c = 15.711(1) A, beta = 90.876(5) degrees, V = 3517.3(4) A(3), and Z = 4.     

Ruthenium(II) 2,2'-Bipyridyl tetrakis acetonitrile undergoes selective axial photocleavage

The complex [Ru(bpy)(AN)4]2+ (bpy = 2,2'-bipyridyl, AN = acetonitrile) has a Ru(II) --> pi(*)(bpy) MLCT band at 388 nm. Upon irradiation on this absorption band, the compound undergoes total regioselective photocleavage yielding complexes fac-[Ru(bpy)(AN)(3)(H(2)O)](2+) and trans-[Ru(bpy)(AN)(2)(H(2)O)(2)](2+) in two consecutive steps with quantum yields of 0.43 and 0.09, respectively. This behavior is a consequence of the stronger sigma-donor ability of the bpy nitrogens that determines the orbital ordering and therefore the nature of the lowest lying 3d-d state responsible for the photochemistry. The two-step photoreaction, which can be followed by UV-vis and NMR spectra, provides a quantitative path to the preparation of trans-polypyridine species with potentially interesting photochemical properties.     

Syntheses, characterization, and photochemical properties of amidate-bridged Pt(bpy) dimers tethered to Ru(bpy)3(2+) derivatives

Amidate-bridged diplatinum(II) entities [Pt(2)(bpy)(2)(μ-amidato)(2)](2+) (amidate = pivalamidate and/or benzamidate; bpy = 2,2'-bipyridine) were covalently linked to one or two Ru(bpy)(3)(2+)-type derivatives. An amide group was introduced at the periphery of Ru(bpy)(3)(2+) derivatives to give metalloamide precursors [Ru(bpy)(2)(BnH)](2+) (abbreviated as RuBnH, n = 1 and 2), where deprotonation of amide BnH affords the corresponding amidate Bn, B1H = 4-(4-carbamoylphenyl)-2,2'-bipyridine, and B2H = ethyl 4'-[N-(4-carbamoylphenyl)carbamoyl]-2,2'-bipyridine-4-carboxylate. From a 1:1:1 reaction of [Pt(2)(bpy)(2)(μ-OH)(2)](NO(3))(2), RuBnH, and pivalamide, trinuclear complexes [Pt(2)(bpy)(2)(μ-RuBn)(μ-pivalamidato)](4+) (abbreviated as RuBn-Pt(2)) were isolated and characterized. Tetranuclear complexes [Pt(2)(bpy)(2)(μ-RuBn)(2)](6+) (abbreviated as (RuBn)(2)-Pt(2)) were separately prepared and characterized in detail. The quenching of the triplet excited state of the Ru(bpy)(3)(2+) derivative (i.e., Ru*(bpy)(3)(2+)) upon tethering the Pt(2)(bpy)(2)(μ-amidato)(2)(2+) moiety is strongly enhanced in RuB1-Pt(2) and (RuB1)(2)-Pt(2), while it is only slightly enhanced in RuB2-Pt(2) and (RuB2)(2)-Pt(2). These are partly explained by the driving forces for the electron transfer from the Ru*(bpy)(3)(2+) moiety to the Pt(2)(bpy)(2)(μ-amidato)(2)(2+) moiety (ΔG°(ET)); the ΔG°(ET) values for RuB1-Pt(2), (RuB1)(2)-Pt(2), RuB2-Pt(2), and (RuB2)(2)-Pt(2) are estimated as -0.01, 0.00, +0.22, and +0.28 eV, respectively. The considerable difference in the photochemical properties of the B1- and B2-bridged systems were further examined based on the emission decay and transient absorption measurements, which gave results consistent with the above conclusions.