Hydrogen-bonding directed cocrystallization of flexible piperazine with hydroxybenzoic acid derivatives: Structural diversity and synthon prediction

Four hydroxybenzoic acid building blocks,m-hydroxybenzoic acid,2,4-dihydroxybenzoic acid,2,5-dihydroxyterephthalic acid,and 5-hydroxyisophthalic acid,have been synthesized as robust cocrystallizing agents and employed in reactions with piperazine,including [(C4H12N22+).(C7H5O3)2 ](1),[(C4H12N22+).(C 7H5O4)2 ](2),[(C4H12N22+).(C8H5O62)](3),and [(C4H12N22+)1/2.(C8H5O5)].2H2O(4).Hydrogen-bonded directed assemblies of four salts were validated by single-crystal X-ray diffraction analysis.In compounds 1-4,hydroxybenzoic acids are all deprotonated and piperazine molecules are all protonated to form piperazine dications and keep the chair conformation.Thermal stability of these compounds has been investigated.     

两个新型锌的配位聚合物的合成与晶体结构

本文以Zn(NO3)2.6H2O分别与1,3,5-均苯三甲酸(1,3,5-H3BTC)和2,5-噻吩二羧酸(2,5-H2TDC)通过水热/溶剂热反应合成了2个锌的配位聚合物[Zn3(OH)(BTC)2(C4N2H11)(H2O)]n(1)(C4N2H11=质子化的哌嗪)和[Zn(2,5-TDC)(i-PrOH)]n(2)。并对配位聚合物1和2进行了元素分析、FTIR和X-射线单晶结构解析等表征。X-射线单晶结构解析表明配位聚合物1和2的晶体均属于正交晶系,空间群分别为Pbca和P212121。化合物1中含有Zn3O结构单元,Zn3O结构单元通过BTC的连接构成1个层状结构,层状结构再通过堆积形成1个三维结构。化合物2中含有无机的Zn-O链。无机Zn-O链通过TDC配体与相邻的6个无机Zn-O链相连形成三维开放式的框架结构。     

Synthesis,characterization and crystal structure of a novel three-dimensional supramolecular architecture formed by manganese(II) and pyridine-2,5-dicarboxylic acid

A novel three-dimensional supramolecular compound formed by Mn(II) and pyridine-2,5-dicarboxylic acid of formula [Mn(Pydc)₂(H₂O)₂] (Pydc?=?pyridine-2,5-dicarboxylic acid) has been synthesized and characterized by elemental analyses, IR, electronic spectra, thermogravimetric analysis and X-ray diffraction techniques. The X-ray structure shows that the central Mn(II) ion is coordinated by two water molecules and two chelated Pydc ligands. Water molecules coordinate with Mn(II) ions in the cis mode. Intermolecular hydrogen bonds play an important role in stabilization of the lattice and construction of the supramolecular network.     

Crystal growth,characterization and photoluminescence study of a novel one dimensional coordination polymer of Cd(II) with thiophene-2,5-dicarboxylic acid

A novel one dimensional coordination polymer of Cd(II) with thiophene-2,5-dicarboxylic acid (H₂tdc), {[Cd(tdc) (H₂O)₃]·1.5H₂O}_n has been prepared by gel diffusion method. Elemental analysis, single crystal and powder X-ray diffraction studies, FT-IR and UV–visible spectral studies were used to characterize the title compound. Cd-thiophene units form a linear chain in the crystal structure. Thiophene rings of a linear chain are stacked parallel to each other while the thiophene rings of the adjacent chains are intercalated and stacked ant-parallel to each other. Extensive hydrogen bond formation and π-π interactions between thiophene moieties are responsible for the supramolecular architecture. TG/DTG studies confirm the presence of both lattice and coordinated water molecules. Photoluminescence studies showed that the title compound is red shifted by 46 nm compared to ligand.     

Complexes of Eu(III), Tb(III) and Cu(II) with proton transfer compound between 2,6-pyridinedicarboxylic acid and 2-aminobenzothiazole: characterization of the structures and physical properties

A proton transfer compound, (ABTH)⁺(PydcH)^? (1), obtained from 2-aminobenzothiazole (ABT) and 2,6-pyridinedicarboxylic acid (Pydc) as well as its Eu(III), Tb(III), and Cu(II) complexes (ABT)₃[Eu(Pydc)₃]·5H₂O (2), (ABT)₃[Tb(Pydc)₃]·5H₂O (3), and (ABT)[Cu(Pydc)(PydcH)]·3H₂O (4) were obtained under ambient conditions and structurally verified by single-crystal X-ray diffraction analyses and further characterized by elemental analyses, powder X-ray diffraction (PXRD), infrared spectroscopy (IR), thermogravimetric analysis (TGA), and magnetic measurements. Compounds 2–4 are the first known solids containing complex anions with Pydc ligands, 2-aminobenzothiazole cations (ABT), and solvate water molecules. During the synthesis of 3, a secondary phase with the formula ABTCl?H₂O was obtained and characterized by elemental analysis and single-crystal X-ray diffraction. The asymmetric unit of 5 consists of six symmetry independent ABT cations, six chlorides, and six water molecules. The two lanthanide complexes showed characteristic emissions of Eu³⁺ and Tb³⁺ ions. The good solubilities of these complexes in water and their luminescence properties make them attractive luminescent labels of biological molecules.     

Syntheses,crystal structures,and luminescence of carboxylato-bridged coordination compounds

Two 2-D metal carboxylate coordination compounds [Tb(pydc)(ox)_1/2(H₂O)₂] (1) and [Cd(pydc)(me)(H₂O)]₂ · H₂O (2) (pyridine-2,5-dicarboxylic acid = pydc, oxalic acid = ox, me = methanol) have been synthesized under hydrothermal conditions. Carboxylates are building blocks in the formation of zigzag chain and cockle stair-like chain structures for 1 and 2, respectively. Both the compounds have been structurally determined by single-crystal X-ray diffraction, and characterized by elemental analysis, infrared spectroscopy, thermogravimetric analysis, and fluorescence spectra.     

Layered calcium phenylphosphonate: Synthesis and properties

Calcium phenylphosphonate, Ca(HO₃PPh)₂, was synthesized by the reaction of calcium nitrate and phenylphosphonic acid. A thorough investigation was performed to study the effect of reaction parameters on the synthesis and growth of crystalline product in a high yield. The compound was structurally characterized by single-crystal X-ray diffraction technique. It consists of a layered structure with inorganic framework of CaO₈ polyhedra from which phenyl groups are pointing out. The inorganic framework is also stabilized by the OH⋯O hydrogen bonds. Results from thermal analysis by thermogravimetry and thermodiffractometry revealed that calcium phenylphosphonate is stable up to 300°C. The compound undergoes consequent thermal decomposition and phase transitions above 300°C temperatures until it converts to δ-Ca(PO₃)₂ at 620°C.     

基于2,5-二溴对苯二羧酸配体的镧系金属有机骨架的合成、结构及性质

采用溶剂热法, 以2, 5-二溴对苯二甲酸(H₂L)为配体, 分别与六水合硝酸钕、六水合硝酸钆反应合成了 2种镧系金属有机骨架(MOFs):{[Nd₂(L)₃(DMF)₂(H₂O)₂]·2DMF}_n (1)和{[Gd₂(L)₃(DMF)₂(H₂O)₂]·2DMF}_n (2)。通过单晶X射线衍射、粉末X射线衍射、红外光谱、元素分析、荧光光谱、热重分析等测试方法对其进行了结构表征与性质研究。结果表明, 2个配合物均是以稀土离子为金属节点, 与配体相互连接, 形成无限延伸的三维网状结构。     

Calcium complex of 2,5-dihydroxybenzoic acid (gentisic acid): synthesis,crystal structure,and spectroscopic properties

The synthesis, crystal structure, and spectral characteristics (IR, Raman, and ¹H and ¹³C NMR) of a monomeric hexa(aqua)calcium compound, viz. [Ca(C₇H₅O₄)₂(H₂O)₆]·H₂O (C₇H₅O₄ = 2,5-dihydroxybenzoate), are reported. The central Ca(II) located on a twofold axis is eight coordinate in an approximate square antiprismatic environment, bonded to two monodentate 2,5-dihydroxybenzoate ligands via the carboxylate oxygen, and six waters. The adjacent monomeric units are linked with the aid of several O–H?O hydrogen bonds.     

Influence of alkyl substituents in 1,3-diethyl-2-thiobarbituric acid on the coordination environment in M(H2O)2(1,3-diethyl-2-thiobarbiturate)2 M = Ca2+, Sr2+

Two new isostructural complexes, [Ca(H₂O)₂(μ₂-Detba-O,O′)₂]_n (1) and [Sr(H₂O)₂(μ₂-Detba-O,O′)₂]_n (2) (HDetba = 1,3-diethyl-2-thiobarbituric acid), were synthesized and characterized by single-crystal and powder X-ray diffraction analysis, TG-DSC, FT-IR, and emission spectroscopy. The single-crystal X-ray diffraction data revealed that 1 and 2 are polymeric where M²⁺ (M = Ca, Sr) is a six-coordinate octahedral binding four Detba^? ions and two water molecules. The octahedra are linked through bridging Detba^? ions forming a 2-D layer. Two intermolecular hydrogen bonds O–H…S in the crystal form a 3-D net. The comparison of M(Detba)₂ and M(Htba)₂ (H₂tba = 2-thiobarbituric acid) structures showed that the coordination number of metals in M(Detba)₂ does not exceed six and there are no π–π interactions, unlike compounds with Htba^?; Detba^? ions are only bridges in HDetba coordination compounds. Thermal decomposition of 1 and 2 includes dehydration, which mainly ends at 200 °C, and organic ligand oxidation at 300–350 °C with a release of CO₂, SO₂, H₂O, NH₃, and isocyanate. Upon excitation at 220 nm, 1 and 2 exhibit an intense emission maximum at 557 nm.     

Syntheses,crystal structures,and photoluminescence of two Cd(II) complexes with simple ligands

Two cadmium complexes, {[Cd₂(2,5-tda)₂(ip)₄]·4H₂O}_n (1) and {[Cd₂(4,4′-obb)₂(ip)₂·H₂O]·H₂O}_n (2) (2,5-tda?=?thiophene-2,5-dicarboxylic acid, 4,4′-obb?=?4,4′-oxybisbenzoic acid, ip?=?1H-imidazo[4,5-f][1, 10]-phenanthroline), were synthesized and characterized by IR, elemental analysis, powder X-ray diffraction, and single-crystal X-ray diffraction. X-ray analysis revealed that 1 is a dinuclear complex with the 2,5-tda anion connecting two Cd ions in a μ₁-η¹:η⁰/μ₁-η¹:η⁰ coordination mode. Each dinuclear complex is further connected with neighboring complexes via hydrogen-bonding interactions. Compound 2 displays a 2-D layer structure with opened windows occupied by crystallographic water molecules. The layers are further packed via hydrogen-bonding interactions. Luminescent properties for 1 and 2 are also investigated in the solid state at room temperature.     

基于2，5-二溴对苯二羧酸配体的镧系金属有机骨架的合成、结构及性质

采用溶剂热法,以2,5-二溴对苯二甲酸(H₂L)为配体,分别与六水合硝酸钕、六水合硝酸钆反应合成了2种镧系金属有机骨架(MOFs)：{[Nd₂(L)₃(DMF)₂(H₂O)₂]·2DMF}_n (1)和{[Gd₂(L)₃(DMF)₂(H₂O)₂]·2DMF}_n (2)。通过单晶X射线衍射、粉末X射线衍射、红外光谱、元素分析、荧光光谱、热重分析等测试方法对其进行了结构表征与性质研究。结果表明,2个配合物均是以稀土离子为金属节点,与配体相互连接,形成无限延伸的三维网状结构。     

New copper(II) complexes including pyridine-2,5-dicarboxylic acid: synthesis,spectroscopic, thermal properties,crystal structure and how these complexes interact with purified PON 1 enzyme

We report the synthesis of two square-pyramidal copper(II) complexes, [Cu(2,5-pydc)(2-aepy)(H₂O)]·H₂O, 1, and [Cu(2,5-pydc)(2-ampy)(H₂O)]·H₂O, 2 (2-aepy = 2-(aminoethyl)pyridine, 2-ampy = 2-(aminomethyl)pyridine, 2,5-pydc = pyridine-2,5-dicarboxylic acid or isocinchomeronic acid). The synthesized complexes have been characterized by X-ray diffraction, FT-IR, elemental, and thermal analysis techniques. The crystal structure of 1 was established by X-ray analysis. Powder X-ray diffraction analysis showed that the complexes are pure. The inhibition of human serum paraoxonase 1 (PON 1, EC 3.1.8.1) enzyme with these complexes were investigated. We used diethyl 4-nitrophenyl phosphate as a substrate to measure the paraoxonase activity of PON 1 enzyme spectrophotometrically. Complexes 1 and 2 decreased the in vitro PON 1 activity with different inhibition mechanisms. Complexes 1 and 2 inhibited paraoxonase activity of this enzyme as competitively and noncompetitively, respectively.     

Synthesis and characterization of a two-dimensional calcium complex with (1,3,4-thiadiazole-2,5-diyldithio)diacetic acid

A two-dimensional coordination polymer {[Ca₂(tzda)₂(H₂O)₄]?·?3H₂O} _n , where H₂tzda is a flexible carboxylate ligand (1,3,4-thiadiazole-2,5-diyldithio)diacetic acid, was synthesized and characterized by X-ray crystallography, IR, TGA and photoluminescence. The results show that there are two crystallographically independent Ca atoms in the structure, which are both seven-coordinate, but with different coordination environments. Two kinds of tzda^2? ligands with identical coordination mode exist in {[Ca₂(tzda)₂(H₂O)₄]?·?3H₂O} _n . The η ²-bridging O3 and O8 atoms link the Ca1 atoms into a 1-D chain, which are further connected by the tzda^2? ligands forming a 2-D network. A series of hydrogen bonds link the 2-D network to form a 3-D architecture. The solid state luminescence behavior of {[Ca₂(tzda)₂(H₂O)₄]?·?3H₂O} _n exhibits one intense emission band at 375?nm upon excitation at 315?nm which can be attributed to the intraligand emission.     

Preparation,Properties and Thermal Decompositions of Co(II), Ni(II), Cu(II), Zn(II) and Cd(II) Complexes of 2,5-dichlorobenzoic Acid

Co(II), Ni(II), Cu(II), Zn(II) and Cd(II) 2,5-dichlorobenzoates were prepared and their compositions and solubilities in water at 295 K were determined. The IR spectra and X-ray diffractograms of the obtained complexes were recorded. The complexes of Co(II), Ni(II), Cu(II), Zn(II) and Cd(II) were obtained as solids with a 1:2 molar ratio of metal to organic ligand and different degrees of hydration. When heated at a heating rate of 10 K min^-1, the hydrated complexes lose some (Co, Zn) or all (Ni, Cu, Cd) of the crystallization water molecules and then decompose to oxide MO (Co, Ni) or gaseous products (Cu, Zn, Cd). When heated at a heating rate of 5 K min^-1, the complexes of Ni(II) and Cu(II) lose some (Ni) or all (Cu) of the crystallization water molecules and then decompose directly to MO. This revised version was published online in July 2006 with corrections to the Cover Date.     

Thermal Decompositions of the Molybdotellurates of Nickel(II) and Cobalt(II)

Molybdotellurates [M(H₂O)₆]₃·[TeMo₆O₂₄], with M=Ni(II) and Co(II), were synthesized and characterized by single-crystal X-ray diffraction for compound 1 and X-ray powder diffraction for compound 2, EDAX, IR, electronic spectra in the solid phase and in solution, and magnetic properties. Thermogravimetry and differential scanning calorimetry of both compounds revealed a loss of 11 water molecules through an endothermal process with ΔH=800 kJ mol⁻¹ for the nickel compound and ΔH=833 kJ mol⁻¹ for the cobalt compound. The residual compounds were characterized by chemical analysis, IR and XPS spectroscopy This revised version was published online in July 2006 with corrections to the Cover Date.     

Spectroscopic and thermal investigations of Cu(II), Zn(II), Cd(II), Pb(II) and Al(III) caproates

Five complexes: Cu(cap)₂·4H₂O, Zn(cap)₂, Cd(cap)₂·4H₂O, Pb(cap)₂ and Al(cap)₃·4H₂O (where cap is the caproate anion?=?CH₃(CH₂)₄COO^?) were synthesized and characterized by elemental analysis, IR-spectroscopy, thermogravimetric analysis (TG), differential thermal analysis (DTA), UV-Vis spectra, ¹H NMR and X-ray powder diffraction (XRD). Using the non-isothermal, Horowitz-Metzger (HM) and Coats-Redfern methods, the kinetic parameters for the non-isothermal degradation of the complexes were calculated using TG data. The infrared and ¹H NMR data are in agreement with coordination through carboxylate, with cap acting as a bridging bidentate ligand. Thermogravimetric analysis of the hydrated complexes shows that the first degradation step is release of water molecules followed by decomposition of the anhydrous complexes, with release of caproate molecules.     

Unusual Hydrogen-bonding Networks Consisting of π-Extended 4,4′-Bipyridines and Chloranilic Acid

Hydrogen-bonding networks of π-extended 4,4′-bipyridines, 2,5-di(4-pyridyl)thiophene (1), 2,5-di(4-pyridyl)furan (2) and 1,4-di(4-pyridyl)benzene (3) with 2,5-dichloro-3,6-dihydroxy-1,4-benzoquinone (chloranilic acid, CA) have been investigated. The dipyridyl compounds afforded complexes 4 [(dication of 1)·(monoanion of CA)²], 5 [(dication of 2)·(dianion of CA)·(MeOH)] and 6 [(3)·(dication of 3)·(dianion of CA)·(H²O)⁶] with CA. X-ray structure analyses revealed the formation of unusual molecular tape and sheet structures involving N–H ?O, O–H ?O, C–H ?O and N–H ?N hydrogen bonds, where the aromatic spacer groups play an important role in constructing the unique crystal structures.     

Synthesis and structural characterization of metal–organic frameworks with the mellitate linker M2(OH)2[C12O12H2]·2H2O (M = Al,Ga, In) MIL-116

A new series of isostructural MOF-type carboxylates called MIL-116 (M₂(OH)₂[C₁₂O₁₂H₂]·2H₂O), was synthesized from the combination of mellitic acid and trivalent p cations M = Al³⁺, Ga³⁺ or In³⁺. Their structures were analyzed either by single-crystal microdiffraction using the synchrotron radiation beamline (ID13 station at ESRF, Grenoble) or solved from powder X-ray diffraction. The 3D hybrid framework is built up from the connection of infinite straight chains of metal-centered octahedra sharing trans corners linked to each other through the mellitate ligands. Here the ligand acts as octadentate linker with four of the carboxylic groups involved in the M–O–C bondings. The two other carboxylate arms remain non-bonded under their protonated form. This represents a rare case of the occurrence of both non-bonding and bonding organic functionalities in a MOF-type solid. Within the tunnels are located water species that interact with the non-coordinated –COOH groups pointing towards the channel.     

Varieties in structures of Co(II), Ni(II) and Cu(II) coordination compounds based on dimethyl pyridin-2-ylcarbamoylphosphoramidate

A series of new 3d metal complexes based on dimethyl pyridin-2-ylcarbamoylphosphoramidate (HL) was synthesized. The compounds with general formula M(HL)₂Cl₂·nH₂O and M(L)₂·nH₂O (M=Co²⁺, Cu²⁺, Ni²⁺) were characterized by means of single-crystal X-ray analysis and IR spectroscopy. The organic ligands in all complexes are coordinated via oxygen atom of the carbonyl group and nitrogen atom of the heterocycle. The coordination environment of the central atoms is a distorted octahedron. The axial positions in the Co(II) and Ni(II) complexes with deprotonated ligands are occupied by water molecules. The Co(II) and Cu(II) complexes with phosphoryl ligands in a neutral form have different ligands in the axial positions: in the Co(II) complex, the positions are occupied by two water molecules, whereas in the Cu(II) complex, the positions are occupied by two chlorine anions. The structure of HL was experimentally and theoretically obtained by utilizing single-crystal X-ray analysis and DFT calculations. The computationally optimized geometric parameters for HL show a good agreement with the experimental results.