Sulfoxide-induced stereoselection in [1,5]-sigmatropic hydrogen shifts of vinylallenes. A computational study

The sulfoxide-induced preference for a migrating trajectory in the vinylallene [1,5]-H sigmatropic shift (resulting in stereodefined trienes in the conceptual equivalent of torquoselectivity in electrocyclizations), originally reported by Okamura, has been computationally studied at the B3LYP/6-311++G(3df,2p)//B3LYP/6-31++G(d,p) level. The face selectivity this group induces in the [1,5]-H shift is enhanced by bulky geminal substituents and is not reproduced by any of the other (more than 20) substituents tested. Analysis of transition-state geometries or charges and evaluation of steric effects did not show any correlation with the preferences. The origin of this selectivity is thought to lie in a secondary orbital interaction (SOI) involving the termini of the pericyclic array and the sulfinyl group which is only observed for this substituent. This secondary orbital interaction, arising from the favorable energies of the orbitals involved, is enhanced in the transition structure due to a better orbital overlap (piC2-C3-->sigma*C1-S), which correlates with a piC2-C3-->sigma*C6-H SOI, which is more important in the transition structure, that weakens the C-H bond, thus lowering the energy of the corresponding transition structure.     

Electronic structure, molecular electrostatic potentials, vibrational spectra in substituted calix[n]arenes (n = 4, 5) from density functional theory

Electronic structure, molecular electrostatic potential, and vibrational frequencies of para-substituted calix[n]arene CX[n]-R (n = 4, 5; R = H, NH(2), t-Bu, CH(2)Cl, SO(3)H, NO(2)) and their thia analogs (S-CX[n]-R; with R = H and t-Bu) in which sulfur bridges two aromatic rings of CX[n] have been derived from the density functional theory. A rotation around CH(2) groups connecting the phenol rings engenders four, namely, cone, partial cone, 1,2-alternate, and 1,3-alternate CX[n]-R conformers. Of these, the cone conformer comprising of large number of O1-H1···O1' interactions turns out to be of lowest energy. Normal vibration analysis reveal the O1-H1 stretching frequency of unsubstituted CX[n] shifts to higher wavenumber (blue shift) on substitution of electron-withdrawing (NO(2) or SO(3)H) groups, while electron-donating substituents (NH(2), t-Bu) engender a shift of O1-H1 vibration in the opposite direction (red shift). The direction of frequency shifts have been analyzed using natural bond orbital analysis and molecular electrostatic potential (MESP) topography. Furthermore, calculated (1)H NMR chemical shift (δ(H)) in modified CX[n] hosts follow the order: H1 > H3/H5 > H7(a) > H7(b). The δ(H) values in CX[4] are in consonant with the observed (1)H NMR spectra.     

Ionized bicyclo[2.2.2]oct-2-ene: a twisted olefinic radical cation showing vibronic coupling

The bicyclo[2.2.2]oct-2-ene radical cation (1(.+)) exhibits matrix ESR spectra that have two very different types of gamma-exo hydrogens (those hydrogens formally in a W-plan with the alkene pi bond), a(2H) about 16.9 G and a(2H) about 1.9 G, instead of the four equivalent hydrogens as would be the case in an untwisted C(2v) structure. Moreover, deuterium substitution showed that the vinyl ESR splitting is not resolved (and under about 3.5 G); this is also a result of the twist. Enantiomerization of the C(2) structures is rapid on the ESR timescale above 110 K (barrier estimated at 2.0 kcalmol(-1)). Density functional theory calculations estimate the twist angle at the double bond to be 11-12 degrees and the barrier as 1.2-2.0 kcalmol(-1). Single-configuration restricted Hartree-Fock (RHF) calculations at all levels that were tried give untwisted C(2v) structures for 1(.+), while RHF calculations that include configuration interactions (CI) demonstrate that this system undergoes twisting because of a pseudo Jahn-Teller effect (PJTE). Significantly, twisting does not occur until the sigma-orbital of the predicted symmetry is included in the CI active space. UHF calculations at all levels that include electron correlation (even semiempirical) predict twisting at the alkene pi bond because they allow the filled alpha and the beta hole of the SOMO to have different geometries. The 2,3-dimethylbicyclo[2.2.2]oct-2-ene radical cation (2(.+)) is twisted significantly less than 1(.+), but has a similar temperature for maximum line broadening. Neither the 2,3-dioxabicyclo[2.2.2]octane radical cation (3(.+)) nor its 2,3-dimethyl-2,3-diaza analogue (5(.+)) shows any evidence of twisting. Calculations show that the orbital energy gap between the SOMO and PJTE-active orbitals for 3(.+) is too large for significant PJTE stabilization to occur.     

Rearrangement and hydrogen scrambling pathways of the toluene radical cation: a computational study

A computational study is undertaken to provide a unified picture for various rearrangement reactions and hydrogen scrambling pathways of the toluene radical cation (1). The geometries are optimized with the BHandHLYP density functional, and the energies are computed with the ab initio CCSD(T) method, in conjunction with the 6-311+G(d,p) basis set. In particular, four channels have been located, which may account for hydrogen scrambling, as they are found to have overall barriers lower than the observed threshold for hydrogen dissociation. These are a stepwise norcaradiene walk involved in the Hoffman mechanism, a rearrangement of 1 to the methylenecyclohexadiene radical cation (5) by successive [1,2]-H shifts via isotoluene radical cations, a series of [1,2]-H shifts in the cycloheptatriene radical cation (4), and a concerted norcaradiene walk. In addition, we have also investigated other pathways such as the suggested Dewar-Landman mechanism, which proceeds through 5, via two consecutive [1,2]-H shifts. This pathway is, however, found to be inactive as it involves too high reaction barriers. Moreover, a novel rearrangement pathway that connects 5 to the norcaradiene radical cation (3) has also been located in this work.     

二氮双环阳离子游离基中N,N'-三电子键

用从头算HF/3-21+G^*优化了二氮双环[m,n,l]游离基阳离子(m,n,l≥2～5)。分子[4,4,4]和[2,2,2]^+.,[3,3,3]^+.,[4,4,4]^+.游离基阳离子的优势构型有D3对称性,而其它游离基阳离子的优势构型为非对称性。通过比较这些阳离子几何构型,HOMO和NHOMO(即NextHOMO和HOMO-1),和由MNDO计算确定的原子对作用能,表明当二氮双环游离基阳离子的桥链(CH2)n的n≥3时,桥头氮原子通过空间相互用用形成了一个弱的N,N'-三电子σ键。形成的三电子键强度不随环的扩大而增强。而三电子键强度被两个因素影响：一个是桥头氮原子间的p轨道重叠的取向;另一个是它们相应p轨道成分。     

p-Benzyne derivatives that have exceptionally small singlet-triplet gaps and even a triplet ground state

In an effort to find a p-benzyne (1,4-didehydrobenzene) derivative with a triplet ground state, we have investigated tetrasubstitution by -F, -NH(2), -CH(3), and -NO(2) groups. These were predicted to reduce the singlet-triplet gap, but none led to a triplet ground state because of unexpected destabilization of one of the radical orbitals. This effect is likely the result of rehybridization of the substituted C atom, which has been observed for substituted benzene and perturbs the side sigma and sigma* orbital energies of the phenyl ring. The role of substituent rotation on the energy difference between the two nominally singly occupied orbitals (S and A) was then investigated. The energy of the A radical orbital was found to be much more sensitive to perturbations within the sigma C[bond]C framework than the S MO. Consequently, we believe that rehybridization of the ring carbons destabilizes the A radical orbital and can lead to large singlet-triplet splittings. To test this hypothesis, calculations on a p-benzyne with 2,6 substitution by oxygen were performed. Interestingly, a triplet ground state was predicted. Yet, examination of the geometry and wave function showed that 2,6-quinone p-benzyne is a very twisted molecule with a C3-C4-C5 allene linkage and a C1 triplet carbene center.     

Tuning aryl, hydrazine radical cation electronic interactions using substituent effects

Absorption spectra for 2,3-diaryl-2,3-diazabicyclo[2.2.2]octane radical cations (2(X)(*+)) and for their monoaryl analogues 2-tert-butyl-3-aryl-2,3-diazabicyclo[2.2.2]octane radical cations (1(X)(*+)) having para chloro, bromo, iodo, cyano, phenyl, and nitro substituents are reported and compared with those for the previously reported 1- and 2(H)(*+) and 1- and 2(OMe)(*+). The calculated geometries and optical absorption spectra for 2(Cl)(*+) demonstrate that p-C6H4Cl lies between p-C6H4OMe and C6H5 in its ability to stabilize the lowest energy optical transition of the radical cation, which involves electron donation from the aryl groups toward the pi*(NN)(+)-centered singly occupied molecular orbital of 2(X)(*+). Resonance Raman spectral determination of the reorganization energy for their lowest energy transitions (lambda(v)(sym)) increase in the same order, having values of 1420, 5300, and 6000 cm(-1) for X = H, Cl, and OMe, respectively. A neighboring orbital analysis using Koopmans-based calculations of relative orbital energies indicates that the diabatic aryl pi-centered molecular orbital that interacts with the dinitrogen pi system lies closest in energy to the bonding pi(NN)-centered orbital and has an electronic coupling with it of about 9200 +/- 600 cm(-1), which does not vary regularly with electron donating power of the X substituent.     

Resonant two-photon ionization spectroscopy of jet-cooled OsC

The optical spectrum of diatomic OsC has been investigated for the first time, with transitions recorded in the range from 17 390 to 22 990 cm(-1). Six bands were rotationally resolved and analyzed to obtain ground and excited state rotational constants and bond lengths. Spectra for six OsC isotopomers, 192 Os 12C (40.3% natural abundance), 190 Os 12C(26.0%), 189 Os 12C(16.0%), 188 Os 12C(13.1%), 187 Os 12C(1.9%), and 186 Os 12C(1.6%), were recorded and rotationally analyzed. The ground state was found to be X 3 Delta 3, deriving from the 4 delta 3 16 sigma 1 electronic configuration. Four bands were found to originate from the X 3 Delta 3 ground state, giving B 0"=0.533 492(33) cm(-1) and r 0 "=1.672 67(5) A for the 192 Os 12C isotopomer (1 sigma error limits); two of these, the 0-0[19.1]2<--X 3 Delta 3 and 1-0[19.1]2<--X 3 Delta 3 bands, form a vibrational progression with Delta G' 1/2=953.019 cm(-1). The remaining two bands were identified as originating from an Omega"=0 level that remains populated in the supersonic expansion. This level is assigned as the low-lying A 3 Sigma 0+ (-) state, which derives from the 4 delta 2 16 sigma 2 electronic configuration. The OsC molecule differs from the isovalent RuC molecule in having an X 3 Delta 3 ground state, rather than the X 2 delta 4, 1 Sigma+ ground state found in RuC. This difference in electronic structure is due to the relativistic stabilization of the 6s orbital in Os, an effect which favors occupation of the 6s-like 16 sigma orbital. The relativistic stabilization of the 16 sigma orbital also lowers the energy of the 4 delta 2 16 sigma 2, 3 Sigma(-) term, allowing this term to remain populated in the supersonically cooled molecular beam.     

Density functional theory and atoms-in-molecule study on the role of two-electron stabilizing interactions in retro Diels-Alder reaction of cycloadducts derived from substituted cyclopentadiene and p-benzoquinone

A systematic investigation on the cycloreversion reaction of the cycloadduct formed between substituted cyclopentadiene and p-benzoquinone (1-19) is reported at the B3LYP/6-311+G**//B3LYP/6-31G* level of theory. The computed activation barrier exhibits a fairly high sensitivity to the nature of substituents at the C7-position. Gibbs free energy of activation for 1 and 19 are found to be 20.3 and 30.1 kcal mol(-1), respectively, compared to 7, which is estimated to be 24.7 kcal mol(-1). Quantitative analysis of the electronic effects operating in both the cycloadduct as well as the corresponding transition state for the retro Diels-Alder (rDA) reaction performed using the natural bond orbital (NBO) and atoms in molecule (AIM) methods have identified important two-electron stabilizing interactions. Among four major delocalizations, sigma(C7-X) to sigma*(C1-C5) [and to sigma*(C2-C6)] is identified as the key contributing factor responsible for ground state C1-C5 bond elongation, which in turn is found to be crucial in promoting the rDA reaction. A good correlation between the population of antibonding orbital [sigma*(C1-C5)] of the ground state cycloadduct and Gibbs free energy of activation is observed. The importance of factors that modulate ground state structural features in controlling the energetics of rDA reaction is described.     

Unusual pathways for metal-assisted C[bond]C and C[bond]P coupling reactions using allenylidenerhodium complexes as precursors

The rhodium allenylidenes trans-[RhCl[[double bond]C[double bond]C[double bond]C(Ph)R](PiPr(3))(2)] [R = Ph (1), p-Tol (2)] react with NaC(5)H(5) to give the half-sandwich type complexes [(eta(5)-C(5)H(5))Rh[[double bond]C[double bond]C[double bond]C(Ph)R](PiPr(3))] (3, 4). The reaction of 1 with the Grignard reagent CH(2)[double bond]CHMgBr affords the eta(3)-pentatrienyl compound [Rh(eta(3)-CH(2)CHC[double bond]C[double bond]CPh(2))(PiPr(3))(2)] (6), which in the presence of CO rearranges to the eta(1)-pentatrienyl derivative trans-[Rh[eta(1)-C(CH[double bond]CH(2))[double bond]C[double bond]CPh(2)](CO)(PiPr(3))(2)] (7). Treatment of 7 with acetic acid generates the vinylallene CH(2)[double bond]CH[bond]CH[double bond]=C=CPh(2) (8). Compounds 1 and 2 react with HCl to give the five-coordinate allenylrhodium(III) complexes [RhCl(2)[CH[double bond]C[double bond]C(Ph)R](PiPr(3))(2)] (10, 11). An unusual [C(3) + C(2) + P] coupling process takes place upon treatment of 1 with terminal alkynes HC[triple bond]CR', leading to the formation of the eta(3)-allylic compounds [RhCl[eta(3)-anti-CH(PiPr(3))C(R')C[double bond]C[double bond]CPh(2)](PiPr(3))] [R' = Ph (12), p-Tol (13), SiMe(3) (14)]. From 12 and RMgBr the corresponding phenyl and vinyl rhodium(I) derivatives 15 and 16 have been obtained. The previously unknown unsaturated ylide iPr(3)PCHC(Ph)[double bond]C[double bond]C[double bond]CPh(2) (17) was generated from 12 and CO. A [C(3) + P] coupling process occurs on treatment of the rhodium allenylidenes 1, 2, and trans-[RhCl[[double bond]C[double bond]C[double bond]C(p-Anis)(2)](PiPr(3))(2)] (20) with either Cl(2) or PhICl(2), affording the ylide-rhodium(III) complexes [RhCl(3)[C(PiPr(3))C[double bond]C(R)R'](PiPr(3))] (21-23). The butatrienerhodium(I) compounds trans-[RhCl[eta(2)-H(2)C[double bond]C[double bond]C[double bond]C(R)R'](PiPr(3))(2)] (28-31) were prepared from 1, 20, and trans-[RhCl[[double bond]C[double bond]C[double bond]C(Ph)R](PiPr(3))(2)] [R = CF(3) (26), tBu (27)] and diazomethane; with the exception of 30 (R = CF(3), R' = Ph), they thermally rearrange to the isomers trans-[RhCl[eta(2)-H(2)C[double bond]C[double bond]C[double bond]C(R)R'](PiPr(3))(2)] (32, 33, and syn/anti-34). The new 1,1-disubstituted butatriene H(2)C[double bond]C[double bond]C[double bond]C(tBu)Ph (35) was generated either from 31 or 34 and CO. The iodo derivatives trans-[RhI(eta(2)-H(2)C[double bond]C[double bond]C[double bond]CR(2))(PiPr(3))(2)] [R = Ph (38), p-Anis (39)] were obtained by an unusual route from 1 or 20 and CH(3)I in the presence of KI. While the hydrogenation of 1 and 26 leads to the allenerhodium(I) complexes trans-[RhCl[eta(2)-H(2)C[double bond]C[double bond]C(Ph)R](PiPr(3))(2)] (40, 41), the thermolysis of 1 and 20 produces the rhodium(I) hexapentaenes trans-[RhCl(eta(2)-R(2)C[double bond]C[double bond]C[double bond]C[double bond]C[double bond]CR(2))(PiPr(3))(2)] (44, 45) via C-C coupling. The molecular structures of 3, 7, 12, 21, and 28 have been determined by X-ray crystallography.     

Molecular structure of 1,5-diazabicyclo[3.1.0]hexane as determined by gas electron diffraction and quantum-chemical calculations

The equilibrium molecular structure and conformation of 1,5-diazabicyclo[3.1.0]hexane (DABH) has been studied by the gas-phase electron-diffraction method at 20 degrees C and quantum-chemical calculations. Three possible conformations of DABH were considered: boat, chair, and twist. According to the experimental and theoretical results, DABH exists exclusively as a boat conformation of C s symmetry at the temperature of the experiment. The MP2 calculations predict the stable chair and twist conformations to be 3.8 and 49.5 kcal mol(-1) above the boat form, respectively. The most important semi-experimental geometrical parameters of DABH (r(e), A and angle)e), deg) are (N1-N5) = 1.506(13), (N1-C6) = 1.442(2), (N1-C2) = 1.469(4), (C2-C3) = 1.524(7), (C6-N1-C2) = 114.8(8), (N5-N1-C2) = 107.7(4), (N1-C2-C3) = 106.5(9), and (C2-C3-C4) = 104.0(10). The natural bond orbital (NBO) analysis has shown that the most important stabilization factor in the boat conformation is the n(N) --> sigma*(C-C) anomeric effect. The geometry calculations and NBO analysis have been performed also for the bicyclohexane molecule.     

Redox reactivity and reorganization energy of zinc cytochrome c cation radical

Little is known about transient intermediates in photoinduced electron-transfer reactions of metalloproteins. Oxidative quenching of the triplet state of zinc cytochrome c, 3Zncyt, is done at 20 degrees C, pH 7.00, and ionic strength of 1.00 M, conditions that suppress the thermal back-reaction and prolong the lifetime of the cation radical, Zncyt+. This species is reduced by [Fe(CN)6]4-, [W(CN)8]4-, [Os(CN)6]4-, [Mo(CN)8]4-, and [Ru(CN)6]4- complexes of similar structures and the same charge. The rate constants and thermodynamic driving forces for these five similar electron-transfer reactions were fitted to Marcus theory. The reorganization energy of Zncyt+ is lambda = 0.38(5) eV, lower than that of native cytochrome c, because the redox orbital of the porphyrin cation radical is delocalized and possibly because Met80 is not an axial ligand to the zinc(II) ion in the reconstituted cytochrome c. The rate constant for electron self-exchange between Zncyt+ and Zncyt, k11 = 1.0(5) x 10(7) M(-1) s(-1), is large owing to the extended electron delocalization and relatively low reorganization energy. These results may be relevant to zinc(II) derivatives of other heme proteins, which are often used in studies of photoinduced electron-transfer reactions.     

Terminally coordinated AsS and PS ligands

The terminal AsS and PS complexes [(N(3)N)W(ES)] (N(3)N=N(CH(2)CH(2)NSiMe(3))(3); E=P (3), As (4)) were synthesised by reaction of [(N(3)N)W[triple chemical bond]As] and [(N(3)N)W[triple chemical bond]P], respectively, with cyclohexene sulfide. Both complexes present very short W--E and E--S bond lengths. The bonding was investigated by density functional theory (DFT) calculations using the fragment calculation method and natural bond orbital (NBO) analysis. According to the fragment analysis, in which the complexes were separated in an ES and a (N(3)N)W fragment, the bonding in complexes 3, 4 and [(N(3)N)W(SbS)] (5) is realised over a set of two sigma (1 sigma and 2 sigma) and two degenerate pi molecular orbitals (MOs) (1 pi and 2 pi). The 1 sigma MO is a bonding MO extended over the N(ax)-W-E-S core, whereas the 2 sigma MO is localised mainly on the E-S fragment. The 1 pi set is a E-S localised bonding molecular orbital, whereas the 2 pi set is in phase with respect to W-E but in antiphase with respect to E-S. Both methods indicate bond orders around two for both the E--S and the W--E bonds. The polarity of the complexes was examined by Hirshfeld charge analysis. This shows that complexes 3 and 4 are only slightly polarised, whereas 5 is moderately polarised toward the sulphur. As suggested by the computational results, the pi system in complexes 3-5 is best described by two three-centre four-electron bonds.     

Toward an intimate understanding of the structural properties and conformational preference of oxoesters and thioesters: gas and crystal structure and conformational analysis of dimethyl monothiocarbonate, CH3OC(O)SCH3

[structure: see text] The molecular structure and conformational properties of dimethyl monothiocarbonate, CH3OC(O)SCH3, have been studied in the gas phase by gas electron diffraction (GED) and vibrational spectroscopy and in the solid state by X-ray crystallography. The experimental investigations were supplemented by quantum chemical calculations at the B3LYP/6-311++G(3df,2p) and MP2/6-311++G(2df,p) levels of approximation. The gaseous molecule exhibits only one conformation having Cs symmetry with synperiplanar orientation of both the C-S and the C-O single bonds relative to the C=O double bond. The following skeletal geometric parameters were derived from the GED analysis (r(hl) values with 3sigma uncertainties): C=O = 1.203(4) A, C(sp(2))-O = 1.335(5) A, C(sp(3))-O = 1.437(5) A, C(sp(2))-S = 1.763(5) A, and C(sp(3))-S = 1.803(5) A; O=C-O = 125.9(8) degrees , O=C-S = 125.7(7) degrees , O-C-S = 108.4(9) degrees , and C-O-C = 113.4(15) degrees . The structure of a single crystal, grown by a miniature zone-melting procedure, was determined by X-ray diffraction analysis at a low temperature. The crystalline solid [monoclinic, P2(1)/n, a = 12.6409(9) A, b = 4.1678(3) A, and c = 19.940(1) A, beta = 98.164(1) degrees ] exists exclusively as molecules in the synperiplanar conformation and with geometrical parameters that agree with those of the molecule in the gas phase. The results are discussed in terms of anomeric and mesomeric effects and in terms of a natural bond orbital analysis.     

Stereoelectronic effect on one-electron reductive release of 5-fluorouracil from 5-fluoro-1-(2-oxocycloalkyl)uracils as a new class of radiation-activated antitumor prodrugs

A series of 5-fluoro-1-(2'-oxocycloalkyl)uracils (3-11) that are potentially novel radiation-activated prodrugs for the radiotherapy of hypoxic tumor cells have been synthesized to evaluate a relationship between the molecular structure and the reactivity of one-electron reductive release of antitumor 5-fluorouracil (1) in anoxic aqueous solution. All the compounds 3-11 bearing the 2'-oxo group were one-electron reduced by hydrated electrons (eaq-) and thereby underwent C(1')-N(1) bond dissociation to release 5-fluorouracil 1 in 47-96% yields upon radiolysis of anoxic aqueous solution, while control compounds (12, 13) without the 2'-oxo substituent had no reactivity toward such a reductive C(1')-N(1) bond dissociation. The decomposition of 2-oxo compounds in the radiolytic one-electron reduction was more enhanced, as the one-electron reduction potential measured by cyclic voltammetry in N,N-dimethylformamide became more positive. The efficiency of 5-fluorouracil release was strongly dependent on the structural flexibility of 2-oxo compounds. X-ray crystallographic studies of representative compounds revealed that the C(1')-N(1) bond possesses normal geometry and bond length in the ground state. MO calculations by the AM1 method demonstrated that the LUMO is primarily localized at the pi* orbital of C(5)-C(6) double bond of the 5-fluorouracil moiety, and that the LUMO + 1 is delocalized between the pi* orbital of 2'-oxo substituent and the sigma* orbital of adjacent C(1')-N(1) bond. The one-electron reductive release of 5-fluorouracil 1 in anoxic aqueous solution was presumed to occur from the LUMO + 1 of radical anion intermediates possessing a partial mixing of the antibonding C(2')=O pi* and C(1')-N(1) sigma* MO's, that may be facilitated by a dynamic conformational change to achieve higher degree of (pi* + sigma*) MO mixing.     

Electroswitchable photoluminescence activity: synthesis, spectroscopy, electrochemistry, photophysics, and X-ray crystal and electronic structures of [Re(bpy)(CO)3(C[triple bond]C[bond]C6H4[bond]C[triple bond]C)Fe(C5Me5)(dppe)][PF6](n) (n = 0, 1)

A novel heterobimetallic alkynyl-bridged complex, [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C)Fe(C(5)Me(5))(dppe)], 1, and its oxidized species, [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C)Fe(C(5)Me(5))(dppe)][PF(6)], 2, have been synthesized and their X-ray crystal structures determined. A related vinylidene complex, [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond](H)C[double bond]C)Fe(C(5)Me(5))(dppe)][PF(6)], 3, has also been synthesized and characterized. The cyclic voltammogram of 1 shows a quasireversible reduction couple at -1.49 V (vs SCE), a fully reversible oxidation at -0.19 V, and a quasireversible oxidation at +0.88 V. In accord with the electrochemical results, density-functional theory calculations on the hydrogen-substituted model complex Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C)Fe(C(5)H(5))(dHpe) (Cp = C(5)H(5), dHpe = H(2)P[bond](CH(2))(2)[bond]PH(2)) (1-H) show that the LUMO is mainly bipyridine ligand pi* in character while the HOMO is largely iron(II) d orbital in character. The electronic absorption spectrum of 1 shows low-energy absorption at 390 nm with a 420 nm shoulder in CH(2)Cl(2), while that of 2 exhibits less intense low-energy bands at 432 and 474 nm and additional low-energy bands in the NIR at ca. 830, 1389, and 1773 nm. Unlike the related luminescent rhenium(I)-alkynyl complex [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C[bond]H)], 4, complex 1 is found to be nonemissive, and such a phenomenon is attributed to an intramolecular quenching of the emissive d pi(Re) --> pi*(bpy) (3)MLCT state by the low-lying MLCT and LF excited states of the iron moiety. Interestingly, switching on of the luminescence property derived from the d pi(Re) --> pi*(bpy) (3)MLCT state can be demonstrated in the oxidized species 2 and the related vinylidene analogue 3 due to the absence of the quenching pathway.     

Orbital symmetry as a tool for understanding the bonding in Krossing's cation

The geometric and electronic structure of Krossing's cation, Ag(eta(2)-P(4))(2)(+), which shows an unexpected planar coordination environment at the metal center and D(2)(h) symmetry both in solution and in the solid state, have been investigated using density functional theory and orbital-symmetry-based energy decomposition. The analysis reveals that the contribution from electrostatic interactions to the bond energy is greater than that of orbital interactions. Partitioning of the latter term into the irreducible representations shows that, in addition to the 5s orbital, 5p orbitals of silver act as acceptor orbitals for electron donation from sigma(P-P) orbitals (a(1)(g), b(1)(u)) and n(P) orbitals (b(3)(u)). Back-donation from the 4d(10) closed shell of Ag into sigma orbitals of the pnictogen cages (b(2)(g)) is also important. However, this contribution is shown not to determine the D(2)(h) structure, contradicting conclusions from the pioneering study of the title cation (J. Am. Chem.Soc. 2001, 123, 4603). The contributions from the irreducible representations to the stabilizing orbital interactions in the D(2)(h) structure and in its D(2)(d)-symmetric conformer are analogous, indicating that the planar coordination environment at the metal center in Ag(eta(2)-P(4))(2)(+) is induced by intermolecular rather than by intramolecular interactions. Because ethylene coordination to a metal ion is an elementary reaction step in industrial processes, the bonding in Ag(C(2)H(4))(2)(+) has been analyzed as well and compared to that in Krossing's cation. Surprisingly, similar contributions to the bond energies and an involvement of metal 4d and 5p orbitals have been found, whereas a recent atoms in molecules analysis suggested that the metal-ligand interactions in silver(I) olefin complexes fundamentally differ from those in tetrahedro P(4) complexes. The only qualitative difference between the bonding patterns in Ag(eta(2)-P(4))(2)(+) and Ag(C(2)H(4))(2)(+) is the negligible energy contribution from the b(3)(u) irreducible representation in the ethylene complex because a respective symmetry-adapted linear combination of ligand orbitals is not available.     

Nonlinear optical property calculations of polyynes with long-range corrected hybrid exchange-correlation functionals

Polarizabilities (alpha), second-hyperpolarizabilities (gamma), and the gamma scaling factors (c) of polyynes [H-(C[triple bond]C)(n)-H, n = 1-8] were evaluated using the long-range corrected (LC) density functional theory (DFT) and LC-DFT with a short-range Gaussian attenuation (LCgau), as well as high quality wavefunction methods. We show that the c values obtained from LC- and LCgau-DFT are consistent with those from CCSD(T) calculations. Furthermore, the polyyne c values we obtained are seen to be smaller than the c values derived from previously calculated polyene gamma values [Sekino et al., J. Chem. Phys. 126, 014107 (2007)] in all the methods we consider. We compare our results with those obtained experimentally [Shepkov et al., J. Chem. Phys. 120, 6807 (2004).] from end-capped polyynes [i-Pr(3)Si-(C[triple bond]C)(n)-Sii-Pr(3)], which show larger c values for polyynes than polyenes. Our alpha and gamma calculations with i-Pr(3)Si-(C[triple bond]C)(n)-Sii-Pr(3) (n = 4, 5, 6, and 8) show that i-Pr(3)Si- may participate in pi molecular orbital delocalization, which can unexpectedly affect the c value. We also confirm the importance of molecular geometry in these nonlinear optical calculations. We find that while LC- and LCgau-DFT excellently reproduce experimental geometries and bond length alternation (BLA), MP2 optimized geometries have a BLA that is too short to be used for accurate alpha and gamma calculations.     

Experimental and theoretical study of the photodissociation reaction of thiophenol at 243 nm: intramolecular orbital alignment of the phenylthiyl radical

The photoinduced hydrogen (or deuterium) detachment reaction of thiophenol (C(6)H(5)SH) or thiophenol-d(1) (C(6)H(5)SD) pumped at 243 nm has been investigated using the H (D) ion velocity map imaging technique. Photodissociation products, corresponding to the two distinct and anisotropic rings observed in the H (or D) ion images, are identified as the two lowest electronic states of phenylthiyl radical (C(6)H(5)S). Ab initio calculations show that the singly occupied molecular orbital of the phenylthiyl radical is localized on the sulfur atom and it is oriented either perpendicular or parallel to the molecular plane for the ground (B(1)) and the first excited state (B(2)) species, respectively. The experimental energy separation between these two states is 2600+/-200 cm(-1) in excellent agreement with the authors' theoretical prediction of 2674 cm(-1) at the CASPT2 level. The experimental anisotropy parameter (beta) of -1.0+/-0.05 at the large translational energy of D from the C(6)H(5)SD dissociation indicates that the transition dipole moment associated with this optical transition at 243 nm is perpendicular to the dissociating S-D bond, which in turn suggests an ultrafast D+C(6)H(5)S(B(1)) dissociation channel on a repulsive potential energy surface. The reduced anisotropy parameter of -0.76+/-0.04 observed at the smaller translational energy of D suggests that the D+C(6)H(5)S(B(2)) channel may proceed on adiabatic reaction paths resulting from the coupling of the initially excited state to other low-lying electronic states encountered along the reaction coordinate. Detailed high level ab initio calculations adopting multireference wave functions reveal that the C(6)H(5)S(B(1)) channel may be directly accessed via a (1)(n(pi),sigma(*)) photoexcitation at 243 nm while the key feature of the photodissociation dynamics of the C(6)H(5)S(B(2)) channel is the involvement of the (3)(n(pi),pi(*))-->(3)(n(sigma),sigma(*)) profile as well as the spin-orbit induced avoided crossing between the ground and the (3)(n(pi),sigma(*)) state. The S-D bond dissociation energy of thiophenol-d(1) is accurately estimated to be D(0)=79.6+/-0.3 kcalmol. The S-H bond dissociation energy is also estimated to give D(0)=76.8+/-0.3 kcalmol, which is smaller than previously reported ones by at least 2 kcalmol. The C-H bond of the benzene moiety is found to give rise to the H fragment. Ring opening reactions induced by the pi-pi(*)n(pi)-pi(*) transitions followed by internal conversion may be responsible for the isotropic broad translational energy distribution of fragments.     

tert-Butylphosphonic acid: from the bulk to the gas phase

The structure of tert-butylphosphonic acid in the solid, in solution, and in the gas phase was studied by single-crystal X-ray diffraction, (1)H and (31)P NMR spectroscopic studies in solution, solid-state (31)P NMR spectroscopy, and electrospray ionization mass spectrometry. In addition, density functional theory (DFT) calculations at the B3LYP/6-31G*, B3LYP/6-31+G*, and B3LYP/6-311+G* level of theory for a large number of H-bonded aggregates of the type (tBuPO(3)H(2))(n) (C(n), P(n); n=1-7) support the experimental work. Crystallization of tBuPO(3)H(2) from polar solvents such as CH(3)CN or THF gives the H-bonded one-dimensional polymer 2, whereas crystallization from the less polar solvent CDCl(3) favors the formation of the H-bonded cluster (tBuPO(3)H(2))(6).CDCl(3) (1). In CDCl(3) the hexamer (tBuPO(3)H(2))(6) (C(6)) is replaced by smaller aggregates down to the monomer with decreasing concentration. DFT calculations and natural bond orbital (NBO) analyses for the clusters C(1)-C(7) and the linear arrays P(1)-P(7) reveal the hexamer C(6) to be the energetically favored structure resulting from cooperative strengthening of the hydrogen bonds in the H-bonded framework. However, the average hydrogen bond strengths calculated for C(6) and P(2) do not differ significantly (42-43 kJ mol(-1)). The average distances r(O.O), r(Obond;H), r(Pdbond;O), and r(Pbond;OH) in C(1)-C(7) and P(1)-P(7) are closely related to the hydrogen bond strength. Electrospray ionization mass spectrometry shows the presence of different anionic species of the type [(tBuPO(3)H(2))(n)-H](-) (A(1)-A(7), n=1-7) depending on the instrumental conditions. DFT calculations at the B3LYP/6-31G* level of theory were carried out for A(1)-A(6). We suggest the dimer [(tBuPO(3)H(2))(2)-H](-) (A(2)) and the trimer [(tBuPO(3)H(2))(3)-H](-) (A(3)) are the energetically favored anionic structures. A hydrogen bond energy of approximately 83 kJ mol(-1) was calculated for A(2). Electrospray ionization mass spectrometry is not suitable to study the assembling process of neutral H-bonded tert-butylphosphonic acid since the removal of a proton from the neutral aggregates has a large influence on the hydrogen bond strength and the cluster structure.