C1 and C2-symmetric carbohydrate phosphorus ligands in asymmetric catalysis

Carbohydrates are increasingly used as starting materials for the synthesis of enantiopure ligands. They contain a considerable number of stereocenters, and compounds with all possible configurational combinations are readily available. This tutorial review focuses on ligands obtained by the introduction of phosphorus functionalities (mainly phosphinite, phosphite or phosphine) into a carbohydrate framework. They are classified according to their structural features. In this review, ligands are organised as C1 ligands with a pyranoside or furanoside structure, and C2 ligands. Particular attention is paid to water soluble ligands prepared from carbohydrates. General methods for the preparation of the ligands are presented in order to show how the backbones can be obtained from simple carbohydrates. The catalytic results obtained in commonly studied processes are presented in tables in order to facilitate the comparison between the ligands. The advantages and limitations of the use of ligands based on carbohydrates are discussed.     

Top leads for swine influenza A/H1N1 virus revealed by steered molecular dynamics approach

Since March 2009, the rapid spread of infection during the recent A/H1N1 swine flu pandemic has raised concerns of a far more dangerous outcome should this virus become resistant to current drug therapies. Currently oseltamivir (tamiflu) is intensively used for the treatment of influenza and is reported effective for 2009 A/H1N1 virus. However, as this virus is evolving fast, some drug-resistant strains are emerging. Therefore, it is critical to seek alternative treatments and identify roots of the drug resistance. In this paper, we use the steered molecular dynamics (SMD) approach to estimate the binding affinity of ligands to the glycoprotein neuraminidase. Our idea is based on the hypothesis that the larger is the force needed to unbind a ligand from a receptor the higher its binding affinity. Using all-atom models with Gromos force field 43a1 and explicit water, we have studied the binding ability of 32 ligands to glycoprotein neuraminidase from swine flu virus A/H1N1. The electrostatic interaction is shown to play a more important role in binding affinity than the van der Waals one. We have found that four ligands 141562, 5069, 46080, and 117079 from the NSC set are the most promising candidates to cope with this virus, while peramivir, oseltamivir, and zanamivir are ranked 8, 11, and 20. The observation that these four ligands are better than existing commercial drugs has been also confirmed by our results on the binding free energies obtained by the molecular mechanics-Poisson-Boltzmann surface area (MM-PBSA) method. Our prediction may be useful for the therapeutic application.     

Binucleare Nickel(0)-Komplexe mit „Schlangenliganden”︁ vom 1-Azadientyp: Modellsysteme der oxidativen Kopplung von 1-Azadienen und 1,3-Dienen am Nickel(0)

Binuclear Nickel(0) Complexes with “Snake Ligands” of 1-Azadiene Type: Model Systems of the Oxidative Coupling of 1-Azadienes and 1.3-Dienes at Nickel(0) Synthesis, properties, and reactions of dimeric nickel(0) complexes with special 1-azadiene typ ligands (“snake ligands”) are described. The X-ray analysis of a typical compound (Bis-(bis-cinnamaldehyde-N,N'-propylendiimine)-dinickel(0)) shows that both central atoms have the coordination number 3. The four 1-azadiene groups are coordinated in a different way: unidendate coordination by N-Ni(1) bond and bidendate coordination by N-Ni(1) and olefine-Ni(2) bond. The compound is a good model system for the oxidative coupling reaction of 1-azadienes with 1.3-dienes at 2 nickel(0) centres. IR and electronic spectra show other complexes with this type of ligands to have an analogous coordination sphere.     

Structural Chemistry of 1-Hydroxyethylidenediphosphonic Acid Complexes

The structural features of complexes of 1-hydroxyethylidenediphosphonic acid (HEDP) with different metals (geometric isomerism, dentate numbers and the mode of coordination of organophosphorus ligand, the structural type and degree of oligomerization, regular distortions of the coordination polyhedron, and the mutual influence of the ligands) are considered. The dependences of the complex structures and of the degree of deprotonation of the HEDP ligands on the synthesis conditions (solution pH and metal : HEDP ratio), on the nature of the metal and the outer-sphere cation, on the composition of the hydrate sphere, and on the availability of the accompanying ligands are also established.     

Complexation of europium(III) by bis(dialkyltriazinyl)bipyridines in 1-octanol

The present work focuses on highly selective ligands for An(III)/Ln(III) separation: bis(triazinyl)bipyridines (BTBPs). By combining time-resolved laser-induced fluorescence spectroscopy, nanoelectrospray ionization mass spectrometry, vibronic sideband spectroscopy, and X-ray diffraction, we obtain a detailed picture of the structure and stoichiometry of the first coordination sphere of Eu(III)-BTBP complexes in an octanolic solution. The main focus is on the 1:2 complexes because extraction studies revealed that those are the species extracted into the organic phase. The investigations on europium(III) complexes of BTBP with different triazin alkylation revealed differences in the formed complexes due to the bulkiness of the ligands. Because of the vibronic sidebands in the fluorescence spectra, we were able to detect whether or not nitrate ligands are coordinated in the first coordination sphere of the Eu-BTBP complexes. In solution, less sterically demanding BTBP offers enough space for additional coordination of anions and/or solvent molecules to form 9-coordinated Eu-BTBP 1:2 complexes, while bulkier ligands tend to form 8-fold-coordinated structures. We also report the first crystal structure of a Ln-BTBP 1:2 complex and that of its 1:1 complex, both of which are 10-coordinated.     

Stable Triarylmethyl Radicals and Cobalt(II) Ions Based 1D/2D Coordination Polymers

The incorporation of organic radicals into coordination polymers was considered as a promising strategy to promote metal-ligand exchange interactions, but there are only a very limited number of stable organic radical-based ligands that can serve well such a purpose. Herein, we report two new tris(2,4,6-trichlorophenyl)methyl (TTM) radical-based ligands L1 and L2 with two and three imidazole substituents, respectively. The imidazole unit serves as a coordination site and it can also stabilize the TTM radical by intramolecular donor–acceptor interaction. Coordination of L1 and L2 with cobalt(II) ions gave the corresponding one- ( CoCP - 1 ) and two-dimensional ( CoCP - 2 ) coordination polymers, the structures of which were confirmed by X-ray crystallographic analysis. Magnetic measurements and theoretical calculations suggest antiferromagnetic coupling between the paramagnetic cobalt(II) ions and the radical ligands. Our study provides a rational design for stable organic radical-based ligands and further demonstrated the feasibility of a metal–radical approach toward magnetic materials.     

1H bridging and terminal hydride T1 values. Comments on classical vs non-classical hydride identification using T1 criteria

Hydride ¹H T₁ values are reported for a selected series of ruthenium, iridium and platinum complexes. These T₁ values range from 6.9 to 0.05 s with the shortest value, 0.05 s, assigned to a complex containing both hydride and coordinated molecular hydrogen, i.e. “M(H₂)”. There are nuclear Overhauser enhancements arising both from protons on coordinated ligands and other hydride ligands. It is suggested that the molecular weight of the complex and the measurement conditions can be important factors for T₁.     

Preparation and spectroscopic characterization of novel cyclodiphosph(V)azane of N(1)-2-pyrimidinylsulfanilamide complexes. Magnetic, thermal and biological activity studies

Hexachlorocyclophosph(V)azane of sulfadiazine, (sulfupyrimidine) [N(1)-2-pyrimidinylsulfanilamide] (H2L1), was prepared and reacted with sulfur and glycine to give (H2L2) and (H2L3) ligands, respectively. The prepared ligands; H2L1, H2L2 and H2L3, react in 1:2 [ligands]:[metal ions] molar ratio with transition metals to give coloured complexes in a relatively good yields. The complexes were characterized using different physicochemical techniques, namely elemental analyses, IR, UV-vis, mass, 1H NMR, molar conductance, magnetic, solid reflectance and thermal analysis. The spectral data reveal that all the ligands behave as neutral bidentate ligands and coordinated to the metal ions via pyrimidine-N and enolic sulfonamide OH. The molar conductance data reveal that the complexes are non-electrolytes while UV-vis, solid reflectance and magnetic moment data have been shown that the complexes have octahedral geometry. The thermal behaviour of the complexes is studied and the thermodynamic activation parameters are calculated. The ligands and their complexes show high to moderate bactericidal activity.     

Stability studies on 1:1 or 1:3 stoichiometry complexes of hexaza tripods with zinc(II), copper(II), nickel(II) and cobalt(II)

The coordination properties of two C₃-symmetry hexaza tripods, 1,3,5-tri(2,5-diazahexyl)benzene (L1) and 1,3,5-tri(2,5-diazaheptyl)benzene (L2), towards Zn²⁺, Cu²⁺, Ni²⁺ and Co²⁺ ions, studied by potentiometric techniques, are reported. Both ligands form quite stable complexes either in a 1:1 or 1:3 M:L stoichiometry, presenting a preferential coordination order: Zn²⁺ < Cu²⁺ > Ni²⁺ > Co²⁺. It is observed that the different configurations of metal complexes are achieved due to the fact that tripodal ligands are flexible and not constrained into a rigid geometry.     

Copper-catalyzed asymmetric conjugate addition of Grignard reagents to 1-(N,N-diisopropylcarbamoyloxy)-1-tosyl-1-alkenes

A copper-catalyzed conjugate addition of Grignard reagents to 1-(N,N-diisopropylcarbamoyloxy)-1-tosyl-1-alkenes led to 1-(N,N-diisopropylcarbamoyloxy)-1-tosyl-2-branched alkanes. Various copper ligands were screened for this reaction. From certain substrates and allylmagnesium bromide, several Josiphos ligands gave low to moderate asymmetric inductions, along with good diastereoselectivity. The stereochemistry of the 1-(N,N-diisopropylcarbamoyloxy)-1-tosyl-2-branched alkanes from this reaction was assigned by comparison with the same products from another synthetic route using chiral pool synthesis and stereoselective lithiation methods.     

四（1-乙烯基咪唑）二异硫氰酸镉的晶体结构和电化学性能

A complex [Cd(NCS)₂(Vim)₄] (where Vim=1-vinylimidazole) was synthesized and it′s crystal structure was determined by X-ray diffraction technique. The compound crystallizes in the Monoclinic space group P2₁/c with the parameters: a=0.858 50(17) nm, b=0.909 90(18) nm, c=1.782 3(4) nm, β=100.14(3)°, V=1.370 5(5) nm³, Z=2. In the structure, each Cd atom is coordinated by four 1-vinylimidazole ligands and a pair of monodentate isothiocyanic groups, affording a compressed octahedral CdN₆ core. The NCS^- anions are trans and four N atoms from the 1-vinylimidazole ligands define the equatorial plane. From the cyclic voltammogram measurement in H₂O, we know that the electrode reaction was a quasi-reversible process. CCDC: 630897.     

Vibrational spectra of 1-methyluracilate complex with silver(I) and theoretical studies of the 1-MeU anion

The FT-Raman and FT-infrared spectra of (1-methyluracilato)silver, [Ag(C(5)H(5)N(2)O(2))] in the solid state have been studied. The complex is a polymer in which one silver ion is linearly bonded to two 1-MeU ligands through the deprotonated N(3) sites and another silver ion is tetrahedrally coordinated to the four 1-MeU ligands through the O2 and O4 carbonyl oxygen atoms. The harmonic vibrational frequencies, infrared intensities and Raman scattering activities of the N(3)-deprotonated 1-methyluracilate anion have been calculated using density functional (B3LYP) and ab initio (HF and MP2) methods with the 6-31G(d,p) and 6-31++G(df,pd) basis sets. The calculated potential energy distribution (PED) for the 1-MeU anion has proved to be of great help in assigning the spectra of the title complex. It can be concluded that the two strong Raman bands at 1263 and 796 cm(-1) are diagnostic for the N3-deprotonation of the 1-methyluracilate ring and complexation with silver ion. The linear N-Ag-N stretching vibrations are assigned to the bands at 448 and 362 cm(-1) (IR) and 453, 362 cm(-1) (Raman). The Ag-O stretching vibrations are assigned to the bands in the range of 280-250 cm(-1).     

Amine-controlled assembly of metal-sulfite architecture from 1D chains to 3D framework

Whereas open-framework materials have been made in a variety of chemical compositions, few are known in which 3-connected SO3(2)- anions serve as basic building units. Here, we report four new metal-sulfite polymeric structures, (ZnSO3)Py (1, py = pyridine), (ZnSO3)2(2,2'-bipy)H2O (2, 2,2'-bipy = 2,2'-bipyridine), (ZnSO3)2(TMDPy) (3, TMDPy = 4,4'-trimethylenedipyridine), and (MnSO3)2en (4, en = ethylenediamine) that have been synthesized hydrothermally and structurally characterized. In these compounds, low-dimensional 1D and 2D inorganic subunits are assembled into higher 2D or 3D covalent frameworks by organic ligands. In addition to the structure-directing effect of organic ligands, the flexible coordination chemistry of Zn2+ and SO3(2)- also contributes to the observed structural diversity. In compounds 1-3, Zn2+ sites alternate with trigonal pyramidal SO3(2)- anions to form three types of [ZnSO3]n chains, whereas in compound 4, a 2D-corrugated [MnSO3]n layer is present. Compound 1 features a rail-like chain with pendant pyridine rings. The pi-pi interaction between 2,2'-bipy ligands is found between adjacent chains in compound 2, resulting in 2D sheets that are further stacked through interlayer hydrogen bonds. Compound 3 exhibits a very interesting inorganic [(ZnSO3)2]n chain constructed from two chairlike subunits, and such chains are bridged by TMDPy ligands into a 2D sheet. In compound 4, side-by-side helical chains permeate through 2D-corrugated [MnSO3]n layers, which are pillared by neutral ethylenediamine molecules into a 3D framework that can be topologically represented as a (3,6)-connected net. The results presented here illustrate the rich structural chemistry of metal-sulfites and the potential of sulfite anions as a unique structural building block for the construction of novel open-framework materials, in particular, those containing polymeric inorganic subunits that may have interesting physical properties such as low-dimensional magnetism or electronic properties.     

Cyclometalation of Arylazo Compounds. Part 1 synthesis and cyclopalladation of some substituted 1-arylazonaphthalenes. 1st Communication on compounds with a metal-arene σ-bond

The syntheses of 1-phenylazonaphthalene ( 1a ) and its [3′-methyl- ( 1b ), 4′-methoxy- ( 1c ), 3′-methoxy- ( 1d )] derivatives are described. Cyclopalladation of these azo ligands with Pd(II) acetate or Na₂PdCl₄ leads to complexes with Pd(II) coordinated on the azo N_β-atom and a Pd? C σ-bond at C(2) in the naphthalene moiety. The preference of Pd(II) for this type of metalation at C(2) over the palladation at the ortho positions of the phenyl ring or at the peri position of the naphthyl ring is believed to be largely due to steric effects and the different reactivities of the two arene moieties. Substitution of the acetato-bridge with bromide or iodide allows the syntheses of the corresponding bromo- and iodo-bridged complexes, and a chloro-bridged dimer complex can be converted to a monomeric ethylenediamino-Pd(II)-azo species with ethylenediamine. Cyclopalladation of sulfonated azo ligands leads to water-soluble Pd(II) complexes with a Pd-C σ-bond at C(2).     

Mimics of ganglioside GM1 as cholera toxin ligands: replacement of the GalNAc residue

Two new cholera toxin (CT) ligands (4 and 5) are described. The new ligands were designed starting from the known GM1 mimics 2 and 3 by replacement of their GalNAc residue with the C4 isomer GlcNAc. As predicted by molecular modelling, the conformational properties of the equivalent pairs 2-4 and 3-5 are very similar and their affinity for CT is of the same order of magnitude. NMR experiments have also proved that 5 occupies the GM1-binding site of the toxin and have revealed its bound conformation.     

Saturation transfer difference 1D-TOCSY experiments to map the topography of oligosaccharides recognized by a monoclonal antibody directed against the cell-wall polysaccharide of group A streptococcus

A new saturation transfer difference 1D-TOCSY NMR experiment that allows the investigation of complex ligands interacting with proteins and its application in the mapping of which portions of oligosaccharide ligands (epitope) interact with a complementary antibody are described. The interaction between trisaccharide and hexasaccharide ligands, corresponding to fragments of the cell-wall polysaccharide of Streptococcus Group A, and a monoclonal antibody directed against the polysaccharide is investigated at the molecular level. The polysaccharide consists of alternating alpha-(1-->2) and alpha-(1-->3) linked L-rhamnopyranose (Rha) residues with branching N-acetyl-D-glucopyranosylamine (GlcNAc) residues linked beta-(1-->3) to alternate rhamnopyranose rings. The epitope is proven to consist not only of the immunodominant GlcNAc sugar but also of an entire branched trisaccharide repeating unit. The experimental NMR data serve to check and validate the computed models of the oligosaccharide-antibody complexes.     

Synthesis and structural characterization of tris(2-oxo-1-tert-butylimidazolyl) and tris(2-oxo-1-methylbenzimidazolyl)hydroborato complexes: a new class of tripodal oxygen donor ligand

A new class of tripodal L(2)X ligands that feature three oxygen donors, namely the tris(2-oxo-1-tert-butylimidazolyl) and tris(2-oxo-1-methylbenzimidazolyl)hydroborato ligands, [To(Bu(t))] and [To(MeBenz)], has been synthesized via the reactions of NaBH(4) with the respective imidazolone. Structural and spectroscopic studies indicate that both [To(Bu(t))] and [To(MeBenz)] are significantly more sterically demanding but less electron donating than the related [O(3)] donor ligand, [CpCo{P(O)(OEt)(2)}(3)].     

三(3,5-二甲基吡唑)氢合硼酸钾及双[三(3,5-二甲基吡唑)]氢合硼酸根合铜(II)的合成和晶体结构

为研究吡唑硼类配体的配位行为, 合成了三(3,5-二甲基吡唑氢合硼酸钾[KHB(C~5H~7N~2)~3], 简称(KL)和双[三(3,5-二甲基吡唑)氢合硼酸根]合铜(II){Cu[HB(C~5H~7N~2)~3]~2}, 简称(CuL~2), 并测定了它们的晶体结构。化合物KL属空间群P2~1/n。a=1.0527(8), b=0.9464(3), c=1.7730(9)nm, β=94.51(5)°,Z=4, D~c=1.268g.cm~-~3, R=0.079。化合物CuL~2属空间群PI, a=0.8768(1),b=1.0170(2), c=1.0859(1)nm, α=62.45(1),β=83.78(1), γ=78.52(1)°, Z=2,D~c=1.298 g.cm~-~3, R=0.062。晶体结构测定结果表明: 化合物KL由钾离子和配体负离子组成, K~+与配体L中的B原子相距0.3634nm, 在配体负离子中B原子与三个吡唑环的N原子及H原子形成四面体构型。化合物CuL~2由孤立分子组成, 铜离子处于分子的对称中心且与两个配体分子中的六个N原子形成六配位的八面体构型, 并表现出明显的Jahn-Teller效应。     

Organometallic supramolecular chemistry with monosaccharides: triethylammonium mu-chloro-bis[chloro(eta5-cyclopentadienyl)-(methyl 4,6-o-benzylidene-beta-D-glucopyranosidato-1kappaO2,1:2kappaO3) zirconate

The reaction of [CpZrCl3(thf)2] with methyl 4,6-O-benzylidene-beta-D-glucopyranoside (beta-MeBGH2, 1) in the presence of Et3N results in the formation of the zirconate complex [Et3NH] [(CpZrCl)2(mu-Cl) (mu-(beta-MeBG)]2] (2). X-ray structure analyses were performed from the ligand precursor beta-MeBGH2 1 as well as from 2. Compound 1 crystallizes in the monoclinic chiral space group P2(1). The molecules show a flat arrangement including the benzylidene protecting group, and are packed in columns. The columns are held together in pairs by the formation of hydrogen bonds between the hydroxy functions in positions 2 and 3. Compound 2 crystallizes in the orthorhombic space group P2(1)2(1)2(1). The beta-MeBG ligands are chelating the Zr atoms through the oxygen atoms in positions 2 and 3 of the glucopyranosidato ligand revealing a 1-zircona-2,5-dioxolane moiety each; the oxygen atom in position 3 is linked to both of the Zr atoms. Additionally one chloro ligand is bridging the two Zr centers. Two terminally bound chloro ligands stick out from the two Zr atoms into a chiral U-shaped cavity constructed by the two beta-MeBG ligands. The cavity incorporates the tertiary ammonium cation [Et3NH]+ which is bound to one of the terminal chloro ligands through a hydrogen bond. The inclusion of the [Et3NH]+ cation in the U-shaped cavity, even in solution, is demonstrated by NMR spectroscopic data.