Loss of 45 Da from a<Subscript>2</Subscript> Ions and Preferential Loss of 48 Da from a<Subscript>2</Subscript> Ions Containing Methionine in Peptide Ion Tandem Mass Spectra

While analyzing tandem mass spectra of tryptic tripeptides, intense unassigned peaks were observed, corresponding to neutral loss of 45 Da from a₂ ions. This process was confirmed by MS³ experiments. Based on exact mass analysis, the loss was ascribed to (NH₃ + CO) or formamide. The proposed mechanism involves a cyclic form of the a₂ ions. The structure of the a₂ − 45 ions was confirmed by their fragmentation in MS³ experiments. Loss of (NH₃ + CO) from the a₂ ions occurs in competition with other paths, such as the loss of H₂O or the formation of immonium ions. However, if the a₂ ion contains methionine, a neutral loss of 48 Da (ascribed to CH₃SH) predominates, and is followed by the loss of (NH₃ + CO). These processes were confirmed by MS³ experiments. The intensity of the a₂ − 48 peak formed from XaaMet has a maximum value of 42% (of the total intensity of all ions) for Xaa=Gly, varies between 15% and 40% for most other Xaa residues, is lower for residues that can undergo loss of water or ammonia, and is very low for Lys or Arg. When the order of the residues is reversed to MetXaa, the loss of 48 Da is much smaller. This effect can be used to determine the sequence of b₂ ions containing Met in proteomic studies. Considerable loss of CH₃SH is observed from doubly protonated tryptic tripeptides with N-terminal Met, but the loss is much less when they are singly protonated or when Met is in the center position.     

Zr<Subscript>5</Subscript>Ir<Subscript>2</Subscript>In<Subscript>4</Subscript> – A Superstructure of the Lu<Subscript>5</Subscript>Ni<Subscript>2</Subscript>In<Subscript>4</Subscript> Type

Summary. Zr₅Ir₂In₄ was synthesized by reaction of the elements in a glassy carbon crucible in a water-cooled sample chamber of an induction furnace. The sample was characterized by X-ray diffraction on both powder and single crystals. Zr₅Ir₂In₄ crystallizes with a pronounced Lu₅Ni₂In₄ type subcell, space group Pbam, a=1739.5(6), b=766.3(2), c=338.9(2) pm. Weak additional reflections force a doubling of the subcell c axis. The superstructure of Zr₅Ir₂In₄ is of a new type: Pnma, a=1739.5(6), b=677.8(2), c=766.3(2) pm, wR2=0.0529, 1592 F² values, and 60 variable parameters. The group-subgroup scheme for the klassengleiche symmetry reduction is presented. The formation of the superstructure is most likely due to a puckering effect (size of the iridium atoms). The crystal chemistry of Zr₅Ir₂In₄ is briefly discussed.     

Crystal structure of glycine phosphite C<Subscript>2</Subscript>H<Subscript>5</Subscript>NO<Subscript>2</Subscript>·H<Subscript>3</Subscript>PO<Subscript>3</Subscript>

Single crystal X-ray diffraction study of glycine phosphite C₂H₅NO₂·H₃PO₃ was performed (monoclinic, space group P2₁/c, a = 7.401(3) Å, b = 8.465(3) Å, c = 9.737(3) Å; β = 100.73(5)°, Z = 4). It has been found that one of hydrogen atoms is located at the centre of symmetry forming two strong hydrogen bonds to yield H₄P₂O ₆ ^?2 dimers, while another hydrogen atom is statistically disordered over two positions and organizes the dimers into an infinite corrugated chain. The ordering of this hydrogen atom position and/or displacement of the other one from the centre of symmetry will lead to the loss of symmetry centre and lowering of the point group symmetry from C_2h to piezo-active group C₂ or C _s .     

Synthesis and crystal structure of [UO<Subscript>2</Subscript>CrO<Subscript>4</Subscript>(C<Subscript>5</Subscript>NH<Subscript>5</Subscript>COO)] · H<Subscript>2</Subscript>O

Synthesis and X-ray diffraction study of [UO₂CrO₄(C₅NH₅COO)] · H₂O crystals were performed. The compound crystallizes in the monoclinic system with the unit cell parameters a = 7.5025(3) Å, b = 11.5188(6) Å, c = 13.0518(6) Å, β = 97.877(4)°, V = 1117.29(9) ų, space group P2₁/n, Z = 4, R = 0.0263. The structure is formed by three [UO₂CrO₄(C₅NH₅COO)] layers parallel to (10\(\bar 1\)). The coordination polyhedron of uranium atoms is a pentagonal bipyramid, whose apices are occupied by oxygen atoms of uranyl, three chromate groups, and two molecules of isonicotinic acid. Crystal chemical formula of the [UO₂CrO₄(C₅NH₅COO)] layer can be represented as AT³B², where A = UO ₂ ²⁺ , T³ = CrO ₄ ^2? , and B² = C₅NH₅COO molecules. The isonicotinic acid molecules are in the form of zwitterions.     

Facile synthesis of V<Subscript>2</Subscript>O<Subscript>5</Subscript>/TiO<Subscript>2</Subscript> core–shell nanobelts

We report a facile chemical approach for the synthesis of one-dimensional V₂O₅/TiO₂ core–shell nanobelts. The coated V₂O₅ nanobelts are synthesized by a hydrothermal method which is feasible for large-scale production. V₂O₅ nanobelts coated with a thin layer of TiO₂ sol are formed before sintering, and after sintering one-dimensional V₂O₅/TiO₂ core–shell nanobelts, composed of single-crystalline V₂O₅ nanobelts cores uniformly coated with anatase TiO₂ nanoparticle shells are obtained. The influences of the synthetic parameters, such as sintering temperature and titanium/vanadium mole ratios, on the morphology of the resulting products are investigated. Interestingly, the shape of single-crystalline of V₂O₅ nanobelts is totally preserved after sintering; the morphology can be readily controlled to be smooth or rough by altering the sintering temperature of the shells and titanium/vanadium mole ratio.     

Effect of Fe-zeolite on formation of N<Subscript>2</Subscript>O in selective reduction of NO by NH<Subscript>3</Subscript> over V<Subscript>2</Subscript>O<Subscript>5</Subscript>–WO<Subscript>3</Subscript>/TiO<Subscript>2</Subscript> catalyst

An approach for significantly suppressing N₂O formation in reduction of NO by NH₃ over V₂O₅–WO₃/TiO₂ (VWT) catalyst has been studied by coating different amounts of a Fe-exchanged zeolite (FeZ) onto the catalyst. FeZ-promoted VWT samples were characterized using N₂ sorption, X-ray diffraction (XRD) analysis, and NH₃ adsorption/desorption techniques to understand the primary role of FeZ in lowering N₂O production levels. At high temperatures (≥450 °C), VWT gave N₂O production with high concentrations, while N₂O formation was noticeably reduced when using FeZ-promoted catalysts, which also showed somewhat lower NO removal activities (<5 %) at all temperatures. N₂ sorption and XRD measurements revealed no perceptible physical or chemical alterations of each constituent, even in VWT catalysts after FeZ coating following high-temperature calcination. Adsorption of NH₃ on unpromoted and FeZ-promoted catalysts and subsequent desorption yielded very complicated spectra for N₂O that might primarily come from NH₃ oxidation, and the interaction between V–NO species at temperatures >580 °C. NO on neighboring sites seems to be produced via decomposition of N₂O generated at lower temperatures. The FeZ in the promoted VWT catalysts could be responsible for N₂O decomposition and N₂O reduction with unreacted NH₃ at temperatures >400 °C, thereby significantly lowering N₂O emission levels. This promotional effect bodes well for use in many industrial deNO _x applications.     

Thermal stability of crandallite CaAl<Subscript>3</Subscript>(PO<Subscript>4</Subscript>)<Subscript>2</Subscript>(OH)<Subscript>5</Subscript>·(H<Subscript>2</Subscript>O)

Thermogravimetry combined with evolved gas mass spectrometry has been used to characterise the mineral crandallite CaAl₃(PO₄)₂(OH)₅·(H₂O) and to ascertain the thermal stability of this ‘cave’ mineral. X-ray diffraction proves the presence of the mineral and identifies the products of the thermal decomposition. The mineral crandallite is formed through the reaction of calcite with bat guano. Thermal analysis shows that the mineral starts to decompose through dehydration at low temperatures at around 139 °C and the dehydroxylation occurs over the temperature range 200–700 °C with loss of the OH units. The critical temperature for OH loss is around 416 °C and above this temperature the mineral structure is altered. Some minor loss of carbonate impurity occurs at 788 °C. This study shows the mineral is unstable above 139 °C. This temperature is well above the temperature in the caves of 15 °C maximum. A chemical reaction for the synthesis of crandallite is offered and the mechanism for the thermal decomposition is given.     

Crystal structure of [(C<Subscript>6</Subscript>H<Subscript>5</Subscript>)<Subscript>4</Subscript>P][Ni(B<Subscript>9</Subscript>C<Subscript>2</Subscript>H<Subscript>11</Subscript>)<Subscript>2</Subscript>]·CCl<Subscript>4</Subscript>

A new compound containing the tetraphenylphosphonium cation and the nickel(III) bisdicarbollyl anion, [(C₆H₅)₄P][Ni(B₉C₂H₁₁)₂]·CCl₄, was synthesized and investigated by XRD at room temperature (295 K). Crystal data: C₂₉H₄₂B₁₈PCl₄Ni, M = 816.69, monoclinic, space group P2/c; unit cell parameters a = 13.5873(6) Å, b = 7.1475(2) Å, c = 20.7829(8) Å, β = 94.4595(13)°, V = 2012.2(2) ų, Z = 2, d _calc = 1.348 g/cm³. The structure was solved by direct and Fourier methods and refined by the full-matrix least squares method in an anisotropic (isotropic for H) approximation to the final R ₁ = 0.0466 for 3055 I _hkl ≥ 2σ _I of 23,655 reflections collected and 5618 independent I _hkl (Bruker X8 APEX diffractometer, λMoK _α).     

Thermal studies of ZnO–B<Subscript>2</Subscript>O<Subscript>3</Subscript>–P<Subscript>2</Subscript>O<Subscript>5</Subscript>–TeO<Subscript>2</Subscript> glasses

The effect of TeO₂ additions on the thermal behaviour of zinc borophosphate glasses were studied in the compositional series (100 − x)[0.5ZnO–0.1B₂O₃–0.4P₂O₅]–xTeO₂ by differential scanning calorimetry, thermodilatometry and heating microscopy thermal analysis. The addition of TeO₂ to the starting borophosphate glass resulted in a linear increase of glass transition temperature and dilatometric softening temperature, whereas the thermal expansion coefficient decreased. Most of glasses crystallize under heating within the temperature range of 440–640 °C. The crystallization temperature steeply decreases with increasing TeO₂ content. The lowest tendency towards crystallization was observed for the glasses containing 50 and 60 mol% TeO₂. X-ray diffraction analysis showed that major compounds formed by annealing of the glasses were Zn₂P₂O₇, BPO₄ and α-TeO₂. Annealing of the powdered 50ZnO–10B₂O₃–40P₂O₅ glass leads at first to the formation of an unknown crystalline phase, which is gradually transformed to Zn₂P₂O₇ and BPO₄ during subsequent heating.     

Crystal structure of Ba<Subscript>3</Subscript>[UO<Subscript>2</Subscript>(C<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>2</Subscript>(NCS)]<Subscript>2</Subscript> · 9H<Subscript>2</Subscript>O

Single crystals of Ba₃[UO₂(C₂O₄)₂(NCS)]₂ · 9H₂O are synthesized and studied by X-ray diffraction. The crystals are orthorhombic, space group Fddd, Z = 16, and the unit cell parameters are a = 16.253(3) Å, b = 22.245(3) Å, c = 39.031(6) Å. The main crystal structural units are mononuclear complex groups [UO₂(C₂O₄)₂NCS]^3? of the crystal-chemical family (AB ₂ ⁰¹ M¹ (A = UO ₂ ²⁺ , B⁰¹ = C₂O ₄ ^2? , M¹ = NCS^?) of the uranyl complexes linked into a three-dimensional framework by electrostatic interactions and hydrogen bonds involving oxalate ions and water molecules.     

Phase Diagram of the System Tl<Subscript>2</Subscript>Te–Tl<Subscript>5</Subscript>Te<Subscript>3</Subscript>–Tl<Subscript>9</Subscript>GdTe<Subscript>6</Subscript>

The ternary system Tl–Gd–Te within the composition range Tl₂Te–T_l5Te₃–T_l9GdTe₆ was studied by a set of physicochemical analysis methods. Some internal polythermal sections and the isothermal section at 300 K of the phase diagram were built, projections of the liquidus and solidus surfaces were constructed, and the graphs of the concentration dependences of the parameters and microhardness were plotted. It was shown that much (more than 90%) of the area of the concentration triangle is occupied by the homogeneity region of solid solutions with the Tl₅Te₃ structure (δ-phase). Solid solutions based on Tl₂Te (α-phase) form within a narrow region. The regions of the α- and δ-phases are separated by two-phase region α + δ.     

Crystal structure of Na<Subscript>3</Subscript>(NH<Subscript>4</Subscript>)<Subscript>2</Subscript>[Ir(SO<Subscript>3</Subscript>)<Subscript>2</Subscript>Cl<Subscript>4</Subscript>]·4H<Subscript>2</Subscript>O

The complex Na₃(NH₄)₂[Ir(SO₃)₂Cl₄]·4H₂O was examined with single crystal X-ray diffraction and IR spectroscopy. Crystal data: a = 7.3144(4) Å, b = 10.0698(5) Å, c = 12.3748(6) Å, β = 106.203(1)°, V = 875.26(8) ų, space group P2₁/c, Z = 2, d _calc = 2.547 g/cm³. In the complex anion two trans SO ₃ ^2? groups are coordinated to iridium through the S atom. The splitting of O-H bending vibrations of crystallization water molecules and N-H ones of the ammonium cation is considered in the context of different types of interactions with the closest neighbors in the structure.     

[Ca(OPPh<Subscript>3</Subscript>)<Subscript>5</Subscript>][Mo<Subscript>6</Subscript>(μ<Subscript>3</Subscript>-Cl)<Subscript>8</Subscript>Cl<Subscript>6</Subscript>] · OPPh<Subscript>3</Subscript>: Synthesis and crystal structure

A solvatothermal reaction of the octahedral cluster molybdenum complex (H₃O)₂[Mo₆(μ₃-Cl)₈Cl₆] · 6H₂O with CaCl₂ · 6H₂O and OPPh₃ in acetonitrile gave the known polymeric complex trans-[{Ca(OPPh₃)₄}{Mo₆(μ₃-Cl)₈Cl₆}]_∞. However, a closer examination revealed that this system also produces a novel cluster complex, [Ca(OPPh₃)₅][Mo₆(μ₃-Cl)₈Cl₆] · OPPh₃, which was isolated and characterized by X-ray diffraction.     

Adsorption of chlorobenzene vapor on V<Subscript>2</Subscript>O<Subscript>5</Subscript>/Al<Subscript>2</Subscript>O<Subscript>3</Subscript> catalyst under dynamic conditions

Adsorption dynamics of chlorobenzene vapors on a 5% V₂O₅/Al₂O₃ catalyst has been investigated using the frontal chromatography technique. The uptakes of chlorobenzene have been measured as a function of vapor concentration and adsorption equilibrium has been found to follow formally the Langmuir isotherm. The breakthrough time proved to be a linear function of the column length as expected. Breakthrough profiles have been reported for different experimental conditions and quantitatively fitted by a reduced lumped diffusion model. This model provides an analytical solution that facilitates engineering calculations. Model parameters show complex behavior as functions of stream characteristics and depend on column length. When empirical expressions relating model mass transfer coefficients with influencing variables are found the model demonstrates good accuracy in predicting column performance.     

Synthesis and study of physicochemical properties of the magnesium heteropoly compound (NH<Subscript>4</Subscript>)<Subscript>4</Subscript>[MgMo<Subscript>6</Subscript>O<Subscript>18</Subscript>(OH)<Subscript>6</Subscript>] · 5H<Subscript>2</Subscript>O

The magnesium heteropoly compound (NH₄)₄[MgMo₆O₁₈(OH)₆] · 5H₂O (I) has been synthesized and studied by mass spectrometry, IR spectroscopy, X-ray powder diffraction, and thermogravimetry. Crystals of I are monoclinic, space group P2₁/n, a = 15.10 Å, b = 11.64 Å, c = 13.53 Å, β = 74.28°, V = 2289.31 ų, ρ_calc = 1.09 g/cm³, Z = 1.     

Crystal structure of Cs[(UO<Subscript>2</Subscript>)<Subscript>2</Subscript>(C<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>2</Subscript>(OH)] · H<Subscript>2</Subscript>O

Single crystals of Cs[(UO₂)₂(C₂O₄)₂(OH)] · H₂O were synthesized and structurally studied using X-ray diffraction. The compound crystallizes in monoclinic space group P2₁/m, Z = 2, with the unit cell parameters a = 5.5032(4) Å, b = 13.5577(8) Å, c = 9.5859(8) Å, β = 97.012(3)°, V = 709.86(9) ų, R = 0.0444. The main building units of crystals are [(UO₂)₂(C₂O₄)₂(OH)]^? layers of the A₂K ₂ ⁰² M² (A = UO ₂ ²⁺ , K⁰² = C₂O ₄ ^2? , and M² = OH^?) crystal-chemical family. Uranium-containing layers are linked into a three-dimensional framework via electrostatic interactions with outer-sphere cations and hydrogen bonds with water molecules.     

Study of Acidic (Tetracaprolactam) Dodecamolybdosilicate of the Composition (C<Subscript>6</Subscript>H<Subscript>11</Subscript>NO)<Subscript>4.5</Subscript>Н<Subscript>4</Subscript>[SiМо<Subscript>12</Subscript>O<Subscript>40</Subscript>]

New caprolactam dodecamolybdosilicate of the composition (C₆H₁₁NO)_4.5Н₄[SiМо₁₂O₄₀] (I) is synthesized. Chemical and crystallographic analyses, NMR and IR spectroscopic studies are performed. Compound I is found to crystallize in the monoclinic system with the space group P2₁/n. Unit cell parameters are: a = 19.945(4) Å, b = 13.340(3) Å, c = 28.110(6) Å, β = 110.75(3)°, ρ_calc = 2.232 g/cm³, М = 2350.63, Z = 4, V = 6994(3) ų.     

Synthesis and structure of the complex [Mo<Subscript>3</Subscript>(μ<Subscript>3</Subscript>-S)(μ<Subscript>2</Subscript>-S<Subscript>2</Subscript>)<Subscript>3</Subscript>(Et<Subscript>2</Subscript>NCS<Subscript>2</Subscript>)<Subscript>3</Subscript>]I

The structure of tri-μ₂-disulfido-μ₃-thiotris(diethyldithiocarbamato)-S,S′-triangle-trimolybdenum iodide [Mo₃(μ₃-S)(μ₂-S₂)₃(Et₂NCS₂)₃]I was determined. The compound was characterized by differential thermal analysis and IR, Raman, and X-ray electronic spectroscopy.     

Crystal structure of Na<Subscript>4</Subscript>[Na<Subscript>2</Subscript>Cr<Subscript>2</Subscript>(C<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>6</Subscript>] · 10H<Subscript>2</Subscript>O

Single crystals of the Na₄[Na₂Cr₂(C₂O₄)₆] · 10H₂O complex were synthesized for the first time. The structure of the complex was determined by X-ray diffraction analysis. The compound crystallizes in the monoclinic crystal system with the unit cell parameters a = 17.290(4) Å, b = 12.521(3) Å, c = 15.149(3) Å, β = 100.45(3)°, Z = 4, space group Cc. Anionic layers [NaCr(C₂O₄)₃] _2n ^4n? can be distinguished in the crystal structure of the complex. The Na⁺ cations and water molecules, involved in the formation of a hydrogen bond network, are located between the anionic layers.     

Synthesis and Structure of [Co(NH<Subscript>3</Subscript>)<Subscript>6</Subscript>]<Subscript>2</Subscript>[W<Subscript>4</Subscript>Se<Subscript>4</Subscript>(CN)<Subscript>12</Subscript>]·8.5H<Subscript>2</Subscript>O

The compound [Co(NH₃)₆]₂[W₄Se₄(CN)₁₂]·8.5H₂O was obtained by evaporating an aqueous ammonia solution of K₆[W₄Se₄(CN)₁₂]·6H₂O and CoCl₂·6H₂O complexes. The starting Co(II) of CoCl₂·6H₂O transforms into [Co(NH₃)₆]³⁺ when exposed to air in a water-ammonia medium. Crystal data: triclinic crystal system, a = 10.7750(8) Å, b = 12.2843(9) Å, c = 19.6539(14) Å; α = 90.213(2)°, β = 99.910(2)°, γ = 114.737(1)°, V = 2319.1(3) ų, space group , Z = 2, D _x = 2.633 g/cm³.Original Russian Text Copyright © 2004 by I. V. Kalinina, Z. A. Starikova, F. M. Dolgushin, D. G. Samsonenko, and V. P. Fedin__________Translated from Zhurnal Strukturnoi Khimii, Vol. 45, No. 5, pp. 905–908, September–October, 2004.