Synthesis,p-Nitrophenolate Complexation and Competitive Anion Signaling of Novel Calixpyrrole Dimer

A novel dimeric calixpyrrole has been synthesized. The dimer forms stable complexes with p-nitrophenolate ion with a concomitant reduction in extinction coefficient. The chromogenic anion is displaced by the addition of various anions like fluoride and acetate. Effective optical sensing of these anions is accomplished using the calixpyrrole dimer.     

A new calix[4]pyrrole derivative and its anion (fluoride)/cation (mercury and silver) recognition

A new calix[4]pyrrole-based macrocycle, meso-tetramethyl-tetrakis{4-[2-(ethylthio)ethoxy]phenyl}calix[4]pyrrole, 7, has been synthesized and fully characterized. Unlike other calixpyrrole derivatives that show selective interaction with anions, calixpyrrole 7 described in the present work forms stable complexes with both metal cations and anions. The thermodynamics of complexation of this ditopic calixpyrrole derivative with metal cations (Hg2+ and Ag+) and the fluoride anion in nonaqueous solutions have been determined by titration calorimetry, and the host-guest composition has been investigated by using conductance measurements at 298.15 K. 1H NMR studies provide clear evidence about the sites of complexation of 7 with the ionic species, which show that the NH groups are taking part in the complexation of this ligand with the fluoride anion while the sulfur donor atoms are responsible for the interaction with metal cations. Using the present data on 7 and structurally related analogues (1-6), the complexation behavior is discussed comparatively from the thermodynamic point of view. Possessing four sulfur-containing pendent arms, 7 displays an enhanced hosting ability for Hg2+ in acetonitrile. As compared with 1, the calixpyrrole derivative, 7, shows a unique interaction with fluoride among the anions investigated in acetonitrile and dimethyl sulfoxide. As far as the fluoride complex is concerned, the medium effect is assessed in terms of the thermodynamics of the transfer of reactants and product from acetonitrile (reference solvent) to dimethyl sulfoxide.     

Sulfur-containing hetero-calix[4]pyrroles as mercury(II) cation-selective receptors: thermodynamic aspects

Two sulfur-containing hybrid calix[4]pyrrole derivatives (III and IV) have been synthesized and fully characterized. Several analytical techniques (1H NMR, conductance measurements, UV-vis spectrophotometry, titration potentiometry, and titration calorimetry) have been used to assess the interaction between these hybrid calixpyrrole receptors and metal cations in acetonitrile and dimethylsulfoxide. The partition constants of calix[4]pyrrole, I, II, and IV in the acetonitrile-hexane solvent system and the solubilities of the ligands in various solvents at 298.15 K were determined. 1H NMR measurements reveal the sites of interaction of calixpyrrole ligands with metal cations in CD3CN. Conductance and UV-vis spectrophotometric measurements were performed to establish the composition of mercury(II) calixpyrrole complexes in acetonitrile at 298.15 K. Titration calorimetry was used to quantitatively assess Hg(II)-calixpyrrole interactions. Thus the thermodynamics of complexation of calixpyrrole ligands with the mercury(II) cation in acetonitrile at 298.15 K are reported. Potentiometric titrations were also used to establish the stepwise stability constants for the complexation of calix[3]thieno[1]pyrrole with the Hg(II) cation in acetonitrile at 298.15 K. The results show that replacement of one or more pyrrole units by thiophene rings in calix[4]pyrrole has tuned significantly the discrimination ability of these ligands between anions and enables the produced hybrid calixpyrroles to bind selectively with Hg(II) in acetonitrile. No interaction was observed between these ligands and other metal cations in acetonitrile.     

PHOTO-CIDNP STUDY OF PYRIMIDINE DIMER SPLITTING II: REACTIONS INVOLVING PYRIMIDINE RADICAL ANION INTERMEDIATES

A series of photo-CIDNP (chemically induced dynamic nuclear polarization) experiments were performed on pyrimidine monomers and dimers, using the electron-donor Nα-acetyltryptophan (AcTrp) as a photosensitizer. The CIDNP spectra give evidence for the existence of both the dimer radical anion, which is formed by electron transfer from the excited AcTrp* to the dimer, and its dissociation product, the monomer radical anion. The AcTrp spectra are completely different from those obtained with an oxidizing sensitizer like anthraquinone-2-sulfonate, because of different unpaired electron spin density distributions in pyrimidine radical anion and cation. In the spectra of the anti (1,3-dimethyluracil) dimers, polarization is detected that originates from a spin-sorting process in the dimer radical pair, pointing to a relatively long lifetime of the dimer radical anions involved. Although the dimer radical anions of the 1,1′-trimethylene-bridged pyrimidines may have a relatively long lifetime as well, their protons have only very weak hyperfine interaction, which explains why no polarization originating from the dimer radical pair is detected. In the spectra of the bridged pyrimidines, polarized dimer protons are observed as a result of spin sorting in the monomer radical pair, from which it follows that the dissociation of dimer radical anion into monomer radical anion is reversible. A study of CIDNP intensities as a function of pH shows that a pH between 3 and 4 is optimal for observing monomer polarization that originates from spin-sorting in the monomer radical pair. At higher pH the geminate recombination polarization is partly cancelled by escape polarization arising in the same product.     

杯吡咯和杂杯吡咯的结构、合成与应用

杯吡咯以其特殊的结构和优异性能, 在主客体化学尤其是分子识别等方面的应用前景已备受关注, 合成新型功能化杯吡咯及其衍生物已成为超分子化学领域的研究热点之一. 近年来通过引入新型芳烃基体合成了结构和性能多样的杂杯吡咯. 主要介绍了功能化的杯吡咯和杂杯吡咯的结构、合成及其在分子识别等领域的应用.     

Strapped and other topographically nonplanar calixpyrrole analogues. Improved anion receptors

Calixpyrroles and related macrocycles are non-aromatic synthetic anion receptors that have attracted considerable attention in recent years. The unfunctionalized, parent calix[4]pyrrole system, also known as octamethylporphyrinogen, may be prepared in one step and in high yield from pyrrole and acetone, and is an effective anion receptor, showing a preference for fluoride, phosphate, carboxylate and chloride anions in organic media. Efforts to improve the anion binding affinity of calix[4]pyrrole and to modify its inherent selectivity have led to the synthesis of a variety of new, modified calixpyrroles. Among the most effective of these are derivatives that contain bridging "straps". In this Feature Article, the preparation and properties of these and other topographically nonplanar calixpyrrole analogues are reviewed from the perspective of the anion recognition chemist.     

Structural peculiarities and the possibility of the existence of small water cluster anions (H2O) n − withn≤4

Structures of (H₂O) _n ⁻ anions withn≤4 were optimized at the UHF/4-31++G^** level and their stability was estimated at the MP2/4-31++G^** level. The trimer anion has a chain-like structure while the tetramer anion can exist either in a chain-like or a cyclic configuration. In the dimer anion and in the chain-like anions, the excess electron density is localized on the terminal water molecule, an acceptor of the H-bond proton. In the cyclic anion, it is uniformly distributed over the free hydrogen atoms. All considered anions have energy values higher than those of the corresponding neutral oligomers. The detachment of an electron from the anions should proceed with the liberation of energy. However, trimer and larger anions are stable against dissociation into individual water molecules and a free electron. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 41–46, January, 1997.     

Tetra­phenyl­phos­phonium 4‐hydroxy‐2,2,6,6‐tetra­methyl­piperidinyl­oxy‐4‐sulfonate

The title compound, C₂₄H₂₀P⁺·C₉H₁₇NO₅S⁻, consists of an organic monovalent cation and an organic monovalent anion, the latter being derived from the TEMPO radical (TEMPO is 2,2,6,6‐tetra­methyl­piperidin‐1‐oxyl). Two inversion‐related anions interact via two –O—H⃛O—S– hydrogen bonds, forming a dimer in which there are no short contacts between the spin centres (–N—O) of the TEMPO(OH)SO₃⁻ anions. Furthermore, no significant magnetic interaction is observed between the dimers because the dimer is surrounded by cations. These results are consistent with the paramagnetic behaviour of the title salt.     

Halide Anion Mediated Dimerization of a meso‐Unsubstituted N‐Confused Porphyrin

The new N‐confused porphyrin (NCP) derivatives, meso‐unsubstituted β‐alkyl‐3‐oxo N‐confused porphyrin (3‐oxo‐NCP) and related macrocycles, were synthesized from appropriate pyrrolic precursors by a [3+1]‐type condensation reaction. 3‐Oxo‐NCP forms a self‐assembled dimer in dichloromethane that is stabilized by complementary hydrogen‐bonding interactions arising from the peripheral amide‐like moieties. The protonated form of 3‐oxo‐NCP was observed to bind halide anions (F^?, Cl^?) through the outer NH and the inner pyrrolic NH groups, thus affording a dimer in dichloromethane. The structure of the chloride‐bridged dimer in the solid state was determined by X‐ray diffraction analysis.     

Nanosecond pulse radiolysis studies in benzene-methanol mixtures using a rigid 7-amino 4-trifluoro methyl coumarin as a probe

Pulse radiolysis of benzene-methanol mixtures leads to the formation of triplets and dimer anions of the solute C153. The spectra of the dimer anions and triplet in these solvent mixtures are reported. The relative G-values of these transients are determined. Dimer anion yield was found to vary exponentially with the reciprocal of the dielectric constant of the mixture.     

An Electrochemical Study of Immobilized Ruthenocene in Aqueous Media

The voltammetric exploration of ruthenocene RuCp₂ in aqueous solution via abrasive modification on a basal plane pyrolytic graphite electrode is reported. It is found that ruthenocene undergoes a one‐electron electrochemically irreversible oxidation to ruthenocenium, which then rapidly dimerizes to form [RuCp₂] . Then, depending on the anion in solution, either disproportionates to [RuCp₂]²⁺ and subsequently decomposes to ruthenium oxide, or is anion stabilized. SEM images and cyclic voltammetry of the electrode surface indicates that in the presence of smaller anions the dimer is not stabilized, whereas for larger anions, such as sodium toluene sulfonate, the dimer is stabilized and decomposition is inhibited.     

Calix[4]pyrrole[2]carbazole: a new kind of expanded calixpyrrole

The synthesis and anion binding properties of a new class of calixpyrrole analogue, containing two carbazole subunits in lieu of two of the four acetone bridging elements normally found in calix[4]pyrrole, is described. The compound exists in a winglike structure in the solid state, as judged from single-crystal X-ray diffraction analyses of both the free system and the corresponding benzoate anion complex. Evidence for anion binding in dichloromethane solution was obtained from static fluorescent quenching experiments; these latter revealed a slight preference for acetate relative to other carboxylate anions (e.g., benzoate, oxalate, succinate), as well as various other anionic substrates (i.e., chloride and dihydrogen phosphate). No evidence of binding was observed in the case of bromide, nitrate, and hydrogen sulfate.     

Tetrakis(bicyclo[2.2.2]oct‐2‐ene)‐Fused Calix[4]pyrrole

Tetrakis(bicyclo[2.2.2]oct‐2‐ene)‐fused calix[4]pyrrole, 5 , was obtained starting from (E)‐1,2‐bis(phenylsulfonyl)ethylene. This new calixpyrrole derivative is the prospective precursor of tetrabenzocalix[4]pyrrole, a potential ion‐pair receptor and an attractive species as a possible deep‐walled ‘molecular container’.     

Synthesis,Structure and Magnetic Properties of Two Cobalt(II) Dicyanamide (dca) Complexes with Heterocyclic Nitrogen Donors Tetra(2‐pyridyl)pyrazine (tppz) and 2,4,6‐Tri(2‐pyridyl)‐1,3,5‐triazine (tptz): [Co2(tppz)(dca)4]·CH3CN and [Co(tptz)(dca)(H2O)](dca)

Two new transition metal dicyanamide complexes [Co₂(tppz)(dca)₄]·CH₃CN ( 1 ) [tppz=tetra(2‐pyridyl)pyrazine, dca=dicyanamide] and [Co(tptz)(dca)(H₂O)](dca) ( 2 ) [tptz=2,4,6‐tri(2‐pyridyl)‐1,3,5‐triazine] were synthesized and characterized by single crystal X‐ray diffraction analysis. In 1 each cobalt(II) atom is coordinated to three dca anions and one tppz molecule to form a distorted octahedral geometry, the neigbour two cobalt(II) atoms are bridged by one tppz ligand to form a dimer, then the cobalt(II) atoms in each dimer are joined together to form a ladder chain structure. In 2 the coordination geometry around the central metal is also distorted octahedral, each cobalt(II) atom is coordinated by two dca anions, one tptz molecule and one water ligand to form a cationic part, and the cationic part is linked with the free dca anions via the electrostatic attraction to give an infinite chain structure. Magnetic susceptibility measurement in the range of 2–300 K indicates that there are antiferromagnetic couplings between adjacent metal ions in 1 (T>29 K, (=?9.78 K, C=4.92 cm³·K·mol^?1) and ferromagnetic couplings in 2 (T>150 K, (=7.97 K, C=2.59 cm³·K·mol^?1) respectively.     

The fluoride dilemma

The implications of environmental contamination by fluoride on human health call upon the need for the development of monitoring systems for the ‘in situ’ detection of fluoride in contaminated sources and new technologies approaches for their removal. This paper reports recent work on the design of calixpyrrole receptors selective for the fluoride anion. The various steps undertaken for the thermodynamic characterization of these receptors and their anionic complexes are discussed. Thus based on thermodynamic data, the medium and ligand effects on selectivity are quantitatively assessed using representative calixpyrrole derivatives.     

Ionic fullerene compounds containing negatively charged dimers and coordinatively bound anions

The review summarizes the results of investigations of ionic fullerene compounds containing negatively charged dimers and fullerene anions coordinated to metalloporphyrins. Fullerene radical anions were found to form diamagnetic singly bonded (C₆₀ ⁻)₂ and (C₇₀ ⁻)₂ dimers. Dimerization is reversible and leads to paramagnetic—diamagnetic phase transitions or a decrease in the magnetic moment of the complexes. The temperature, at which dissociation of the (C₆₀ ⁻)₂ dimers begins, varies from 140 to 320 K; the corresponding temperature for the (C₇₀ ⁻)₂ dimers varies from 260 to 360 K and higher. We prepared the first doubly bonded (C₆₀ ⁻)₂ dimer. At 300 K, this dimer exists as a biradical. The fullerene radical anions form Co—C coordination bonds with cobalt(II) porphyrinates. The resulting anions are diamagnetic. In some cases, Co—C coordination bonds undergo reversible dissociation, resulting in magnetic transitions from the diamagnetic to the paramagnetic state. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 361–381, March, 2007.     

A spiral-like chain from a hydrogen-bonded cyclic dichloride containing a water dimer in a quaternary diammonium dichloride trihydrate

The reaction of benzyl chloride with tetramethylethylenediamine (tmen) results in the formation of the quaternary diammonium dichloride trihydrate (dbtmen)Cl₂·3H₂O 1 (dbtmen is N,N′-dibenzyl-N,N,N′,N′-tetramethylethylenediammonium) in good yields. 1 crystallises in the monoclinic P2₁/c space group and its structure consists of N,N′-dibenzyl-N,N,N′,N′-tetramethylethylenediammonium dication, two chloride anions and three crystal water molecules all of which are located in general positions. The organic dication is H-bonded to the chloride anions and the crystal waters with the help of intra-and intermolecular C-H···Cl and C-H···O interactions, while the chloride anions are linked to the crystal waters via O-H···Cl interactions. One of the crystal waters is linked through an intermolecular O-H···O bond with another water resulting in the formation of a water dimer. The O-H···Cl and O-H···O interactions between the chloride anions and water molecules lead to the formation of a five-membered {O₃Cl₂} cyclic dichloride containing a water dimer. The five-membered rings are linked into a chain with the aid of a O-H···Cl interaction. The organic cations are organised in zigzag fashion on either side of the chain and are further linked to the anionic water chain via weak C-H···O and C-H···Cl interactions, leading to the supramolecular organisation of the rings into a spiral-like of chain. Dedicated to Prof. Sabyasachi Sarkar on the occasion of his 60^th birthday     

Do Photolyases Need To Provide Considerable Activation Energy for the Splitting of Cyclobutane Pyrimidine Dimer Radical Anions?

cis-syn Cyclobutane pyrimidine dimers, major UV-induced DNA lesions, are efficiently repaired by DNA photolyases. The key step of the repair reaction is a light-driven electron transfer from the FADH(-) cofactor to the dimer; the resulting radical anion splits spontaneously. Whether the splitting reaction requires considerable activation energy is still under dispute. Recent reports show that the splitting reaction of a dimer radical anion has a significant activation barrier (0.45 eV), and so photolyases have to provide considerable energy. However, these results contradict observations that cis-syn dimer radical anions split into monomers at -196 degrees C, and that the full process of DNA photoreactivation was fast (1.5-2 ns). To investigate the activation energies of dimer radical anions, three model compounds 1-3 were prepared. These include a covalently linked cyclobutane thymine dimer and a tryptophan residue (1) or a flavin unit (3), and the covalently linked uracil dimer and tryptophan (2). Their properties of photosensitised splitting of the dimer units by tryptophan or flavin unit were investigated over a large temperature range, -196 to 70 degrees C. The activation energies were obtained from the temperature dependency of splitting reactions for 1 and 2, 1.9 kJ mol(-1) and 0.9 kJ mol(-1) for the thymine and uracil dimer radical anions, respectively. These values are much lower than that obtained for E. coli photolyase (0.45 eV), and are surmountable at -196 degrees C. The activation energies provide support for previous observations that repair efficiencies for uracil dimers are higher than thymine dimers, both in enzymatic and model systems. The mechanisms of highly efficient enzymatic DNA repair are discussed.     

Structural studies on rare earth carboxylates: I. Studies on the crystal structure of tris(neopentanoato)-tris(neopentanoic acid)neodymium(III) dimer, [NdA3(HA)3]2

The title complex was synthesized and its structure was determined. The crystal is monoclinic with space group P2₁/n. Unit cell parameters are as follows: a=16.474(8), b=12.425(4), c=20.844(12)Å, β=109.27(4)°, Z=4. In each dimer, the two Nd atoms are connected through two pairs of bridging neopentanoate anions. The two carboxyl groups in each pair are in opposite position to Nd atom which are coplanar with them and the two planes are perpendicular with each other. In the complex each Nd atom is further coordinated with three neopentanoic acid molecules and one monodentate neopentanoate anion. The central atom is octa-coordinated in a square-antiprism arrangement.     

Anion-binding behavior of hybrid calixpyrroles

Hybrid calixpyrrole systems are calixpyrrole-like macrocycles that are based on more than one type of small molecule building block. Structurally, these "mixed-breed" macrocycles differ from calixpyrroles in that some pyrrolic units in the latter are replaced by other hetereocyclic units such as furan, thiophene, bipyrrole, and bithiophene. Although several such systems have been reported in recent years, only a few have been studied as possible anion receptors. In this paper, the results of detailed anion binding studies involving several prototypic systems are reported. Taken in concert, these results highlight the fact that some hybrid systems, including compounds 2-5, display anion affinities that are considerably weaker than those of the parent system 1. On the other hand, they also show that compounds 6-8 are good receptors for "Y-shaped" anions, such as carboxylates, and that they bind these species with high affinity. These findings are strongly supported by solid-state structural studies, which reveal an interesting "cross binding mode" for the binding of carboxylate anions by the bis-thiophene, bis-pyrrole system 7.