Surface-enhanced raman scattering from poly(4-vinyl pyridine)

Surface-enhanced Raman scattering (SERS) has been observed for poly(4-vinyl pyridine) absorbed onto silver island films. Bands near 1219 and 1613 cm^?1, which are weak in normal Raman spectra of PVP, are strong in SERS spectra, and the band near 1020 cm^?1, which is the strongest band in the normal spectra, is relatively weak in SERS. The strongest bands in the SERS spectra all belong to the same symmetry species as α_ZZ, implying that the pyridine moieties are adsorbed through the nitrogen atoms with a vertical conformation. The ring breathing mode of the pyridine rings is observed near 1020 cm^?1, a frequency characteristic of pyridinium ions or coordinated pyridine, providing further evidence for adsorption through the nitrogen atoms. Silver catalyzed photooxidation, which can lead to the appearance of artifacts in SERS spectra, particularly of polymers, can be reduced by overcoating SERS samples with thin films of polymers such as poly(methyl methacrylate) that have low Raman scattering cross sections.     

High-resolution NMR spectra of n-alkanes penetrating into carbon fibers and of protons in carbon fibers

We present a simple NMR method for microscopically exploring the local environment in carbon fibers. The method utilizes n-alkanes as probe molecules, where the n-alkanes penetrate carbon fibers of interest. The high-resolution (1)H NMR spectra for a mixture of a carbon fiber and n-alkanes acquired by this method show a shift of the resonance line, which is due to the local structure of the fiber. The utility of this method is discussed on the basis of the (1)H NMR spectra obtained. In addition, the (1)H distribution and the local motion in the structure of the carbon fiber are revealed in view of the (1)H NMR spectra.     

Charge transfer in the Cl-CO cluster induced by core ionization

Ab initio calculations of core-ionization spectra of the anion-molecule Cl-CO cluster are performed. Particular attention is paid to the investigation of charge-transfer screening processes accompanying core ionization of the CO molecule in the cluster. The charge-transfer processes are very efficient and favored by the presence of a low-lying unoccupied pi* orbital in CO capable of accepting an electron from Cl-. The O1s(-1) and C1s(-1) core-ionization spectra are calculated and compared. Both reveal a breakdown of the quasiparticle picture of core ionization caused by the charge-transfer processes. Remarkable differences between these two spectra are found which manifest themselves in distinct intensity distributions in the prominent low-energy spectral bands. The underlying reason for these differences is elucidated and linked with the preference of the pi* orbital to localize mainly on carbon. Core-ionization spectra of anion-molecule clusters are very sensitive to the type of the molecule involved as the comparative analysis of the O1s(-1) core-ionization spectra of the Cl-CO and Cl-H(2)O clusters show.     

Orientation effects on nitric acid dihydrate films

An investigation of orientation effects in films of nitric acid dihydrate (NAD) is presented, based on a systematic study of transmission and reflection-absorption infrared (RAIR) spectra of samples of varying thickness. The samples are prepared by vapor deposition on Ge (for transmission spectroscopy) and on Al substrates (for RAIR spectroscopy) at 175 K to produce crystalline alpha-NAD films. Transmission spectra were recorded at normal incidence, and RAIR spectra were recorded at a grazing angle of 75 degrees, with polarized radiation. The observed spectra are compared with predictions of a classical Fresnel model, to test the available optical indices of NAD, which are of great importance for the accurate interpretation of data from remote sensing measurements. Whereas the procedure yields satisfactory results for transmission and s-polarized RAIR spectra, it is found that the agreement is not acceptable for p-polarized RAIR spectra. An explanation is suggested in terms of a preferential alignment of the films, with the (10-1) crystallographic plane of the crystal situated parallel to the substrate. The infrared activity of a band at approximately 1170 cm(-1) is explained in terms of a preferential orientation of the crystal domains in the film.     

Cation spectroscopy and binding energy determination for 1,4-benzodioxan-Ar1 and -Ar2 complexes

Cation vibronic spectra are measured for 1,4-benzodioxan (BZD) and van der Waals complexes of BZD with one and two Ar atoms using zero electron kinetic energy and mass analyzed threshold ionization spectroscopy. The spectra of the monomer cation were used to measure the frequencies of the two key low-frequency modes which had previously been extensively studied in the neutral S0 and S1 states. The aliphatic ring twisting mode, nu25, has an energy of 146 cm(-1) in the cation, intermediate between the values found in the S0 and S1 states. The bending, butterfly-like mode nu48 has an energy of 125 cm(-1), which is of higher frequency than either of the neutral states. The S1 spectra of the BZD-Ar1 and BZD-Ar2 complexes are recorded and observed to have modest red shifts from the monomer. The cation spectra of the complexes are also measured using mass analyzed threshold ionization spectroscopy including scans at higher energy which are used to determine the Ar binding energies. The energies for the loss of one Ar atom were determined to be 630 +/- 10 and 650 +/- 10 cm(-1) for BZD-Ar and BZD-Ar2, respectively. The similar cation spectra and similar binding energies indicate that each Ar atom in BZD-Ar2 has a similar binding geometry. Quantum chemical calculations were performed which had fair agreement with the measured binding energies and give some insight into the specific binding geometry.     

Properties of a mixed-valence (Fe(II))2(Fe(III))2 square cell for utilization in the quantum cellular automata paradigm for molecular electronics

The di-mixed-valence complex [{(eta(5)-C5H5)Fe(eta(5)-C5H4)}4(eta(4)-C4)Co(eta(5)-C5H5)]2+, 1(2+), has been evaluated as a molecular four-dot cell for the quantum cellular automata paradigm for electronic devices. The cations 1(1+) and 1(2+) are prepared in good yield by selective chemical oxidation of 1(0) and are isolated as pure crystalline materials. The solid-state structures of 1(0) and 1(1+) and the midrange- and near-IR spectra of 1(0), 1(1+), 1(2+), and 1(3+) have been determined. Further, the variable-temperature EPR spectra of 1(1+) and 1(2+), magnetic susceptibility of 1(1+) and 1(2+), M?ssbauer spectra of 1(0), 1(1+), and 1(2+), NMR spectra of 1(0), and paramagnetic NMR spectra of 1(1+) and 1(2+) have been measured. The X-ray structure determination reveals four ferrocene "dots" arranged in a square by C-C bonds to the corners of a cyclobutadiene linker. The four ferrocene units project from alternating sides of the cyclobutadiene ring and are twisted to minimize steric interactions both with the Co(eta(5)-C5H5) fragment and with each other. In the solid state 1(2+) is a valence-trapped Robin and Day class II compound on the 10(-12) s infrared time scale, the fastest technique used herein, and unambiguous evidence for two Fe(II) and two Fe(III) sites is observed in both the infrared and M?ssbauer spectra. Both EPR and magnetic susceptibility measurements show no measurable spin-spin interaction in the solid state. In solution, the NMR spectra show that free rotation around the C-C bonds connecting the ferrocene units to the cyclobutadiene ring becomes increasingly hindered with decreasing temperature, leading to spectra at the lowest temperature that are consistent with the solid-state structure. Localization of the charges in the cations, which is observed in the paramagnetic NMR spectra as a function of temperature, correlates with the fluxional behavior. Hence, the alignment between the pi systems of the central linker and the ferrocene moieties most likely controls the rate of electron exchange between the dots.     

Multiway decomposition of NMR spectra with coupled evolution periods

Coupling evolution periods in NMR experiments on proteins has recently attracted much attention for its substantial savings in measurement time. Using the concept of multiway decomposition, which already proved useful in many types of NMR applications, the novel tool PRODECOMP decomposes sets of spectra with coupled evolution periods and attempts to provide all information that would be found in a corresponding full-dimensional spectrum. It offers the following advantages: (1) all experimental spectra are used simultaneously, avoiding sensitivity loss associated with individual examination of the spectra, (2) folding (aliasing) caused by the linear combinations of individual shifts in the projected spectra is automatically resolved, allowing for better resolution due to smaller spectral widths, (3) various types of schemes for the coupling of evolution periods are possible, (4) reconstructions of various high-dimensional spectra, including the corresponding full-dimensional spectrum, are straightforward, (5) overlap in both the projected and the directly detected dimensions is efficiently resolved. The capabilities of PRODECOMP are illustrated for a 14 kD protein, for which 12 projections of a five-dimensional spectrum with the nuclei N, HN, CO, Calpha, and Halpha are analyzed.     

Vibrational Relaxation in beta-Carotene Probed by Picosecond Stokes and Anti-Stokes Resonance Raman Spectroscopy

Picosecond time-resolved Stokes and anti-Stokes resonance Raman spectra of all-trans-beta-carotene are obtained and analyzed to reveal the dynamics of excited-state (S(1)) population and decay, as well as ground-state vibrational relaxation. Time-resolved Stokes spectra show that the ground state recovers with a 12.6 ps time constant, in agreement with the observed decay of the unique S(1) Stokes bands. The anti-Stokes spectra exhibit no peaks attributable to the S(1) (2A(g) (-)) state, indicating that vibrational relaxation in S(1) must be nearly complete within 2 ps. After photoexcitation there is a large increase in anti-Stokes scattering from ground-state modes that are vibrationally excited through internal conversion. The anti-Stokes data are fit to a kinetic scheme in which the C=C mode relaxes in 0.7 ps, the C-C mode relaxes in 5.4 ps and the C-CH(3) mode relaxes in 12.1 ps. These results are consistent with a model for S(1)-S(0) internal conversion in which the C=C mode is the primary acceptor, the C-C mode is a minor acceptor, and the C-CH(3) mode is excited via intramolecular vibrational energy redistribution.     

Pendular-state spectroscopy of the S(1)-S(0) electronic transition of 9-cyanoanthracene

Fluorescence excitation spectra of the S(1)-S(0) origin band of 9-cyanoanthracene have been observed under a uniform electric field up to 200 kV/cm to explore pendular-state spectrum of an asymmetric-top molecule close to the strong field limit. The observed spectra exhibit distinct evolution of the band contour as a function of the applied electric field, which are much different from each other for different excitation configurations. An approximate method suitable for spectrum simulations of large asymmetric-top molecules in a pendular condition is developed for the analysis of the experimental results. The comparison of the observed and simulated spectra shows that the spectra are well ascribed in terms of the pendular-state selection rules, which have recently been derived from theoretical consideration of the pendular-limit representation of energy levels and spectra.     

Four-color hole burning spectra of phenol/ammonia 1:3 and 1:4 clusters

The hole burning spectra of phenol/ammonia (1:3 and 1:4) clusters were measured by a newly developed four-color (UV-near-IR-UV-UV) hole burning spectroscopy, which is a kind of population labeling spectroscopy. From the hole burning spectra, it was found that single species is observed in an n = 3 cluster, while three isomers are observed simultaneously for n = 4. A possibility was suggested that the reaction efficiency of the hydrogen transfer from the electronically excited phenol/ammonia clusters, which was measured by a comparison with the action spectra of the corresponding cluster, depends on the initial vibronic levels.     

Near-infrared spectroscopy of newly developed PEGylated lipids

Near-infrared (NIR) spectroscopy has been used to analyze a suite of synthesized PEGylated lipids (1-3) trademarked as QuSomes. The three amphiphiles used in this study, differ in their hydrophobic chain length and contain various units of polyethylene glycol (PEG) head groups. Whilst the spectra of QuSomes show a common pattern, differences in the spectra are observed which enable the lipids to be distinguished. NIR absorption spectra of these new artificial lipids have been recorded in the spectral range of 4800-9000 cm(-1) (approximately 2100-1100 nm) by using a new miniaturized spectrometer based on micro-optical-electro-mechanical systems (MOEMS) technology. Three NIR spectral regions are identified, (a) the high wavenumber region between 6500 and 9000 cm(-1) attributed to the first overtone of the hydroxyl stretching and second overtone of the C-H stretching mode; (b) the 5350-5900 cm(-1) region attributed to first overtone of the C-H stretching mode; and (c) the 4800-5300 cm(-1) region attributed to the combination O-H stretching and second overtone of the C=O stretching mode. For each of these regions, the lipids show distinctive spectra which allow their identification and characterization. NIR spectroscopy is a less used technique which does have great potential for the study of lipids, particularly to examine the behaviour of nanovesicles (liposomes) formed from lipids in aqueous suspensions. The study of such lipids is important since they are used as membrane models and prominent candidate for substance and drug delivery systems.     

六氟磷酸二(4,4'-二甲基-2,2'-联吡啶)·(2,2'-联吡啶-4,4'-二羧酸)合钌(Ⅱ)的二维核磁共振

用1H NMR和13C NMR谱研究了新型电化学发光探针六氟磷酸二(4,4'-二甲基-2,2'-联吡啶)·(4,4'-二羧酸-2,2'-联吡啶)合钌(Ⅱ)的立体结构,通过1H-1H COSY、13C-1H HETCOR谱对其氢谱和碳谱中的各谱峰进行了归属,并给出了氢谱和碳谱峰的化学位移值.     

Dynamic NMR: A new procedure for the estimation of mixing times in the 2D EXSY experiments. A four-site exchange system studied by 1D and 2D EXSY spectroscopy

A procedure for the estimation of the mixing time between the last two 90° pulses in the classic three-pulse sequence NOESY/EXSY is proposed and tested and some considerations for the treatment of the two-dimensional (2D) ¹H NMR exchange spectra are given. The rate constants are thus obtained with reasonable precision. This procedure was followed to obtain the 2D spectra of the model compound α-[bis(dimethylamino)methylene]-4-nitrophenylacetonitrile, which represents a four-site exchange system. The barriers to restricted rotations found in this compound were also determined from one-dimensional (1D) ¹H NMR spectra, which were processed with the iterative complete lineshape analysis (CLSA) method. The double-fit approach was incorporated in the CLSA method. It is shown that the results from the 2D dynamic NMR spectral studies corroborate those obtained by the CLSA double-fit method.     

Structural and spectroscopic studies of some copper(I) halide tert-butyl isocyanide adducts

Single-crystal structural characterizations confirm the existence of the unusual 1 : 4 copper(I) halide : unidentate ligand adducts [Cu(CNt-Bu)4]X for X = Cl, Br (two forms), I (the chloride and one form of the bromide being solvated) with crystal packing dominated by stacks of interleaving cations. Cu-C range between 1.941(2) and 1.972(4) A. The structure of the 1 : 2 chloride complex is also recorded, being [ClCu(CNt-Bu)2], with the copper(I) atom environment trigonal planar, while CuCN : (CNt-Bu) (1 : 1) is a single-stranded polymer which spirals about a crystallographic 3-axis (CN scrambled), the ligands being pendant from the ...CuCNCuCN... string. The (5Cu static broadline NMR spectra of [Cu(CNt-Bu)4]I and [Cu(CNt-Bu)4]Br.H2O in the solid state exhibit dominant, narrow -1/2 <--> +1/2 central transition resonances and associated +/-1/2 <--> +/-3/2 satellite transition resonances which are characteristic of first-order quadrupole broadened systems, while associated high-resolution 65Cu MAS NMR data provide accurate measurement of the 65Cu isotropic chemical shifts. Both approaches provide complete data on the quadrupole and chemical shift interactions which contribute to these spectra. Far-IR spectra of products of reactions involving a range of CuX : t-BuNC ratios reveal the existence of 1 : 1.5 adducts for X = Br, I. Metal-carbon and metal-halogen bands are assigned in the far-IR spectra, which indicate a binuclear double halogen-bridged structure for the 1 : 1.5 complexes.     

Synthesis and cofluorescence of Eu(Y) complexes with salicylic acid and o-phenanthroline

A series of dinuclear complexes of salicylic acid (HSal) and o-phenanthroline (Phen) with different molar ratios of Eu3+ to Y3+ have been synthesized. Their compositions are Eu(x)Y(1-x) (Sal)3(Phen) (x = 0 to approximately 1). Their UV spectra, IR spectra, and fluorescence spectra were studied. The UV spectra of the complexes reflect essentially absorption of the ligands for the fact that no obvious change of wavelength and band shape is found between the spectra of the complexes and that of the ligands except slight red shift. The IR absorption spectra indicate that salicylic acid is coordinated to the rare earth ions and chemical bonds are formed between rare earth ions and nitrogen atoms of o-phenanthroline. The fluorescence spectra of the complexes indicate that the fluorescence emission intensity of europium ion was enhanced by the addition of Y3+, which is referred to as cofluorescence. These facts show that not only the ligands but also the yttrium complex can transfer the absorbed energy to Eu3+ ion in the complexes. Formation of polynuclear complexes appears to be responsible for cofluorescence.     

Synthesis and spectroscopic characterization of copper(II)-nitrito complexes with hydrotris(pyrazolyl)borate and related coligands

This study focuses on the geometric (molecular) structures, spectroscopic properties, and electronic structures of copper(II)-nitrito complexes as a function of second coordination sphere effects using a set of closely related coligands. With anionic hydrotris(pyrazolyl)borate ligands, one nitrite is bound to copper(II). Depending on the steric demand of the coligand, the coordination mode is either symmetric or asymmetric bidentate, which leads to different ground states of the resulting complexes as evident from EPR spectroscopy. The vibrational spectra of these compounds are assigned using isotope substitution and DFT calculations. The results demonstrate that nu sym(N-O) occurs at higher energy than nu asym(N-O), which is different from the literature assignments for related compounds. UV-vis absorption and MCD spectra are presented and analyzed with the help of TD-DFT calculations. The principal binding modes of nitrite to Cu(II) and Cu(I) are also investigated applying DFT. Using a neutral tris(pyrazolyl)methane ligand, two nitrite ligands are bound to copper. In this case, a very unusual binding mode is observed where one nitrite is eta1-O and the other one is eta1-N bound. This allows to study the properties of coordinated nitrite as a function of binding mode in one complex. The N-coordination mode is easily identified from vibrational spectroscopy, where N-bound nitrite shows a large shift of nu asym(N-O) to >1400 cm-1, which is a unique spectroscopic feature. The optical spectra of this compound exhibit an intense band around 300 nm, which might be attributable to a nitrite to Cu(II) CT transition. Finally, using a bidentate neutral bis(pyrazolyl)methane ligand, two eta1-O coordinated nitrite ligands are observed. The vibrational and optical (UV-vis and MCD) spectra of this compound are presented and analyzed.     

An experimental value for the B(1u) C-H stretch mode in benzene

We here present experimental infrared spectra on two (C(6)H(6))(C(6)D(6)) benzene dimer isomers in the gas phase. The spectra show that the two benzene molecules in the dimer are symmetrically inequivalent and have distinct IR signatures. One of the two molecules is in a site of low symmetry, which leads to the IR activation of fundamental modes that are IR forbidden by symmetry in the monomer. In the spectra, all four fundamental C-H stretch modes of benzene are observed. Modes in the dimer are shifted up to 3 cm(-1) to the red, compared to the modes that are known for the monomer. For the nu(13) B(1u) C-H stretch fundamental mode of benzene, a first experimental value of 3015(+2) (-5) cm(-1) is determined, in excellent agreement with anharmonic frequency calculations presented here.     

Harmonic and anharmonic features of IR and NIR absorption and VCD spectra of chiral 4-X-[2.2]paracyclophanes

The vibrational absorption spectra and vibrational circular dichroism (VCD) spectra of both enantiomers of 4-X-[2.2]paracyclophanes (X = COOCD3, Cl, I) have been recorded for a few regions in the range of 900-12000 cm(-1). The analysis of the VCD spectra for the two IR regions, 900-1600 cm(-1) and 2800-3200 cm(-1), is conducted by comparing with DFT calculations of the corresponding spectra; the latter region reveals common motifs of vibrational modes for the three molecules for aliphatic CH stretching fundamentals, whereas in the mid-IR region, one is able to identify specific signatures arising from the substituent groups X. In the CH stretching region between 2900 and 2800 cm(-1), we identify and interpret a group of three IR VCD bands due to HCH bending overtone transitions in Fermi resonance with CH stretching fundamental transitions. The analysis of the NIR region between approximately 8000 and approximately 9000 cm(-1) for X = COOCD3 reveals important features of the aromatic CH stretching overtones that are of value since the aromatic CH stretching fundamentals are almost silent. The intensifying of such overtones is attributed to electrical anharmonicity terms, which are evaluated here by ab initio methods and compared with literature data.     

A theoretical study of the XP and NEXAFS spectra of alanine: gas phase molecule, crystal, and adsorbate at the ZnO(10 ̅10) surface

The adsorption of alanine on the mixed-terminated ZnO(10 ?10) surface is studied by means of quantum-chemical ab initio calculations. Using a finite cluster model and the adsorption geometry as obtained both by periodic CPMD and embedded cluster calculations, the C1s, N1s and O1s X-ray photoelectron spectra (XPS) and near-edge X-ray absorption fine structure (NEXAFS) spectra are calculated for single alanine molecules on ZnO(10 ?10). These spectra are compared with the spectra calculated for alanine in the gas phase and in its crystalline form and with experimental XPS and NEXAFS data for the isolated alanine molecule and for alanine adsorbed on ZnO(10 ?10) at multilayer and monolayer coverage. The excellent agreement between the experimental and calculated XP and NEXAFS spectra confirms the calculated adsorption geometry: A single alanine molecule is bound to ZnO(10 ?10) in a dissociated bidentate form with the two O atoms of the acid group bound to two Zn atoms of the surface and the proton transferred to one O atom of the surface. Other possible structures, such as adsorption of alanine in one of its neutral or zwitterionic forms in which the proton of the -COOH group remains at this group or is transferred to the amino group, can be excluded since they would give rise to quite different XP spectra. In the multilayer coverage regime, on the other hand, alanine is in its crystalline form as is also shown by the analysis of the XP spectra.     

Simulation of the two-dimensional electronic spectra of the Fenna-Matthews-Olson complex using the hierarchical equations of motion method

We apply the Liouville space hierarchical equations of motion method to calculate the linear and two-dimensional (2D) electronic spectra of the Fenna-Matthews-Olson (FMO) protein complex from Chlorobium tepidum, using a widely used model Hamiltonian. The absorption and linear dichroism spectra of the FMO complex, as well as the main features of the 2D spectra are well reproduced. However, comparison with the recent experimental 2D spectra reveals several limitations of the current model: (1) The homogeneous and inhomogeneous broadening seems to be overestimated for the first exciton peak, but may be underestimated for several other exciton peaks. (2) The calculated oscillations of the diagonal and off-diagonal peaks in the 2D spectra are much weaker than the experimental observations, which indicates that an improved model is needed for the excitonic dynamics of the FMO complex.