PHOTOSENSITIZED DIMERIZATION OF THYMINE

Abstract— In contrast with previous reports from other laboratories, four isomeric dimers were isolated from the photochemical reaction of thymine sensitized by either acetone or propiophenone. Product analyses, made by use of nuclear magnetic resonance spectroscopy, showed that the distribution of dimers is dependent on the character of the solvent medium. Mass spectra for all four dimers were obtained and are here presented.     

Synthesis of ether- and carbon-linked polycarboranyl porphyrin dimers for cancer therapies

Porphyrin dimers bearing multiple carborane cages for potential use as sensitizers in boron neutron capture therapy (BNCT) and photodynamic therapy (PDT) were synthesized from protoporphyrin dimethyl ester and characterized. Diastereomeric ether-linked dimers bearing four closo carborane cages (40 boron atoms) were found to be unstable to the acidic conditions necessary for conversion into water-soluble salts. In contrast, the carbon---carbon-linked dimers bearing six icosahedral carboranes (60 boron atoms) were stable to acid and could be isolated as water-soluble sodium salts. In vitro and in vivo studies of these novel molecules are currently under investigation.     

C,C‐ and N,C‐Coupled Dimers of 2‐Aminotetraphenylporphyrins: Regiocontrolled Synthesis,Spectroscopic Properties,and Quantum‐Chemical Calculations

β,β′‐Bisporphyrins are intrinsically chiral porphyrin dimers with fascinating properties. The configurational stability at their axes can be directed by variation of the central metal atoms. Herein, we present a regioselective functionalization of the monomeric 2‐amino‐tetraphenyl‐porphyrin as a versatile substrate for dimerization by oxidative coupling. By simple variation of the reaction conditions (solvent and oxidant), the oxidation selectively gave either the axially chiral C,C‐coupled diaminobisporphyrin in high yields or, under Ullmann conditions, the twofold N,C‐linked achiral dimer, also in good yields. A generalized mechanism for the coupling reaction is proposed based on DFT calculations. The axially chiral β,β′‐coupled porphyrin dimers were isolated as racemic mixtures, but can be resolved by HPLC on a chiral phase. TDDFT and coupled‐cluster calculations were used to explain the spectroscopic properties of the aminoporphyrins and their dimers and to elucidate the absolute configurations of the C,C‐coupled bisporphyrins.     

PHOTOSENSITIZED SPLITTING OF PYRIMIDINE DIMERS IN DNA BY INDOLE DERIVATIVES AND TRYPTOPHAN-CONTAINING PEPTIDES

Abstract —Indole derivatives, such as serotonin or the oligopeptide Lys-Trp-Lys, are able to photosensitize the splitting of thymine dimers in DNA. These indole derivatives have to be bound to DNA in order to efficiently photosensitize the splitting reaction. Serotonin may also induce the photosensitized formation of thymine-containing dimers in native DNA. In this case, an equilibrium is reached when 5 per cent of the total thymines are dimerized. In both cases (splitting and dimer formation), the formation of electron donor-acceptor complexes between either dimers or two adjacent thymine monomers, and excited indole rings, could be an intermediate step in the reactions. Thymine-dimer splitting would then result from an electron transfer reaction involving the indole ring as the electron donor. These results are discussed with respect to the mechanism of action of the photoreactivating enzyme.     

Dimers and Trimers of Diphosphenes: A Wealth of Cyclo‐Phosphanes

Various new P‐based ring systems were synthesised by transferring established reaction routes from NP chemistry to the analogous PP compounds. Due to the different electronic situations of phosphorus and nitrogen with respect to s and p character of the lone pair, different reactivity of the phosphorus compounds was observed, especially with regard to the specificity of the reactions and the stability of the products. Whereas Mes*N?PCl (Mes*=2,4,6‐tri‐tert‐butylphenyl) is stable in the solid state and in solution, the formal phosphorus congener Mes*P?PCl is highly reactive and could not be observed. Instead, several formal dimers and trimers of Mes*P?PCl could be isolated, which constitute an intriguing variety of three‐ and four‐membered ring systems.     

The synthesis of head-to-tail (H-T) dimers of 3-substituted thiophenes by the hypervalent iodine(III)-induced oxidative biaryl coupling reaction

The head-to-tail (H-T) dimers could be obtained selectively by the oxidative coupling reaction of 3-substituted thiophenes using a combination of hypervalent iodine(III) reagents and trimethylsilyl trifluoromethanesulfonate.     

Anthracene derivatives and the corresponding dimers with TEMPO radicals

Anthracene derivatives with several TEMPO radicals (2-4, 10) were prepared, and each photodimerization reaction was investigated. Although the photodimerization was unsuccessful in obtaining the dimers of anthracenes 2 and 3, which could be alternatively prepared in a stepwise manner, the photodimers of anthracenes 4 and 10 were available by the direct photoreaction. The dissociation reaction of the dimers proceeded well by heating them in solution to give the corresponding monomers in each case, and thus the reversible system could be constructed in the latter two systems. While no large difference was observed in their magnetic behaviors between the monomer/dimer pair of 4 and 8, an intriguing difference was found in the magnetic behaviors for the pair of 10 and 11 from ferromagnetic interactions in 10 to the variable magnetic interactions in 11 depending on the solvent molecules incorporated in the crystals.     

Manganese(III) acetate-mediated radical reaction of [60]fullerene with phosphonate esters affording unprecedented separable singly-bonded [60]fullerene dimers

Radical reaction of [60]fullerene with phosphonate esters mediated by manganese(III) acetate in chlorobenzene afforded singly-bonded fullerene dimers, of which the individual meso and racemic isomers could be unexpectedly separated out for the first time.     

Evidence for the pairwise disposition of grafting sites on highly dehydroxylated silicas via their reactions with Ga(CH3)3

Molecules encountering silica interfaces interact primarily with the hydroxyl groups that terminate the bulk structure. When the nominal surface density is very low, these "silanols" are presumed to be isolated. Nevertheless, silicas that are highly dehydroxylated by pretreatment at 800 °C react with Ga(CH(3))(3) at room temperature to give primarily disilanolate-bridged digallium sites, [(CH(3))(2)Ga(μ-OSi≡)](2). The EXAFS at the Ga K-edge shows a prominent Ga-Ga scattering path, regardless of whether an excess or a limiting amount of Ga(CH(3))(3) is used. Some dimers are formed by the concerted reaction of Ga(CH(3))(3) with an "isolated" silanol and an adjacent siloxane bond. These grafting sites are proposed to be hydroxyl-substituted 2-rings, formed by condensation within a vicinal Q(2)-Q(3) pair. Other dimers are formed by reaction of Ga(CH(3))(3) with vicinal Q(3)-Q(3) pairs which have not condensed, even at 800 °C. In a computational model for the dimer sites, the O-O distance is <2.6 ?, which is far shorter than the calculated mean interhydroxyl separation for the thermally treated silicas (12.2 ?). This highly nonrandom distribution of surface silanols, in combination with the coupled reaction of "isolated" silanols and strained siloxane bonds, accounts for the preferential formation of grafted site pairs rather than isolated grafted sites when silica surfaces are chemically modified.     

"Dimers" and "trimers" of tetrahydroindenes and hexahydroazulenes, respectively generated from [2-(1-cycloalkenyl)ethynyl]carbene complexes (M = W, Cr) by cascade cyclization/cycloaddition reactions

A cascade of cyclization/cycloaddition reactions was triggered by addition of protic oxygen nucleophiles ROH 2 (RO = CH3CO2, PhCO2, PhO) to [2-(1-cyclohexenyl)ethynyl]carbene complexes 1b and 1c (M=W, Cr, respectively), affording highly strained "dimers" 11/11' and "trimers" 12 of the carbene ligand. The first reaction step involved the formation of 1-metalla1,3,5-hexatrienes 7, which readily gave tetrahydroindenes 8 by pi cyclization and extrusion of the metal unit. "Dimers" 11/11' were generated from tetrahydroindenes 8 by a highly exo selective [4+2] cycloaddition of compounds 1b and 1c to afford 1-metalla-1,3,5-hexatriene intermediates 9, and a spontaneous pi cyclization of the latter compounds involving the disengagement of the metal unit. Propenylidene cyclohexenes 13/13' were formed in "ene"-type side reactions to the pi cyclization of 1-metalla-1,3,5-hexatrienes 7, by loss of the metal unit. "Dimers" 11 were transformed into "trimers" 12 by a [4+2] cycloaddition and subsequent pi-cyclization of the resulting 1-metalla-1,3,5-hexatriene system. The course of the reaction was elucidated by means of model reactions with (2-phenylethynyl)carbene complex 14, in which 1-metalla-1,3,5-hexatriene intermediates 16 and 17 were isolated and characterized. Alkynyl benzene derivatives 19 were obtained by an unprecedented ring-expansion of a cyclopentadiene unit of "dimers" 11a and 11c, involving the insertion of a carbene carbon atom of compound 14 into a C=C bond. A reaction cascade leading to "dimers" 24/24' could also be triggered by treatment of compounds 2 with [2-(1-cycloheptenyl)ethynyl]carbene tungsten complex 1d.     

Structural and Quantitative Analyses of 4-Chloroaniline-Derived Oligomers

Abstract

The oxidation of 4-chloroaniline by a peroxidase resulted in eight oligomeric products. A reverse-phase high performance liquid chromatography (HPLC) method was developed so that substrate disappearance and the corresponding product formations could be quantitatively monitored. The product mixture was isolated from the aqueous reaction solution with solid-phase extraction and the extract components were separated by thin-layer chromatography (TLC). The individual TLC bands were extracted for mass spectrometric and proton nuclear magnetic resonance analyses. The product mixture was found to contain dimers, trimers, and tetramers with benzoquinone monoimine, benzopuinone di-mine, diaminobenzene, and azobenzene structures. Analytical methodologies were specific for the study of the oxidative transformation of 4-chloroaniline, but they should be applicable to other anilinederived oligomers.     

Formation of Dimers of Some 2‐Substituted Indan‐1‐one Derivatives during Base‐Mediated Cross‐Aldol Condensation

Unexpected dimers of some 2‐substituted indan‐1‐one derivatives were isolated during aldol condensation of indan‐1‐one with various aldehydes in the presence of KOH (see Scheme). Monomeric products, usually expected from aldol condensation, further underwent a base‐catalyzed nucleophilic addition reaction to their dimeric form in some cases. The structures of these dimers were characterized by using various spectral techniques and in one case, structural details were determined from a high‐resolution crystallographic analysis.     

In situ photochemical conversion from cinnamoyl-functionalized liquid-crystalline monomers to liquid-crystalline dimers

Liquid-crystalline (LC) monomers, which were functionalized with a cinnamoyl group on their extremity, were synthesized and irradiated with UV light in their LC phases. In the presence of a triplet sensitizer, most LC monomers were converted into the corresponding dimers, which were produced by the cycloaddition reaction of the cinnamoyl group. The photodimerization reaction could proceed while the LC phases were maintained, because the dimers showed LC phases whose temperature ranges were wider than those of the corresponding monomers. A ¹H NMR study of the LC dimers indicated that the cyclobutane unit dominantly had an anti-head-to-head configuration, that is, δ-truxinate. As the LC monomers, which had a phenyl biphenyl-4-carboxylate moiety as a mesogen, showed smectic A phases and the corresponding dimers also exhibited smectic A phases, we estimated the smectic layer distances by X-ray diffraction analysis and found that the dimers adopted the structure in which the two mesogens aligned laterally and existed in the same smectic layer in the LC phases.     

Design of main-chain polymers of chiral imidazolidinone for asymmetric organocatalysis application

Main-chain polymers of chiral imidazolidinone were successfully synthesized by reaction of chiral imidazolidinone dimers with disulfonic acid. Chiral imidazolidinones were incorporated into the main-chain of the polymer by ionic bonding. These polymers could be used as polymeric chiral organocatalysts for asymmetric Diels-Alder reactions.     

Acetylenchemie. 4 mitt. Synthese von haplophyllin und N-methylflindersin,zwei wege zu N-funktio-nalisierten pyrano[3,2-c]chinolin-alkaloiden

Pyrano[3,2-c]quinoline alkaloids 3 , suitable precursor for photobiomimetic dimerisations, are available by ptc-reactions of 4-hydroxyquinoline-2-ones 1 with 3-chloro-3-methylbut-1-yne, as byproducts uro[3,2-c]-quinoline-2-one is isomeres 5 are found. In the synthesis of flindersine ( 3a ) additionally the oxazolo[3,2-a]quinolin-5-one 4 could be isolated, while in the preparation of N-methylflindersine ( 3b ) a bis-(N-methyal-4′-hydroxyquinolin-2′-one-3′-yl)isopentene ( 7 ) was identified. Alkaloid dimers, which may be formed from the intermediates 6 , were not present. The structure of 7 confirms reaction pathways, discussed previously. Haplophylline ( 3c ) is synthesized for the first time by N-alkylation a of 3a with 3-methylcrotonyal chlormethyl ester.     

Solid-state tautomerism in 2-carboxyindan-1,3-dione

The structure of 2-carboxyindan-1,3-dione was investigated using a combination of quantum-chemical calculations and solid-state NMR and IR spectroscopy. Due to poor solubility of the compound in different solvents, no single crystals could be obtained. Two dimeric structures formed from the tautomers of 2-carboxyindan-1,3-dione are likely to coexist in the solid state. The dimers interconvert via intramolecular proton transfer in one of the tautomeric forms constituting the dimers. The energy barrier of the intramolecular proton transfer reaction is calculated as 5.82 kcal mol(-1) at the MP2/6-31++G level of theory.     

Generation and synthetic uses of stable 4-[2-isopropylidene]-phenol carbocation from bisphenol A

[reaction: see text] Stable 4-[2-isopropylidene]-phenol carbocation, IPP cation 1, was generated readily by addition of bisphenol A in concentrated sulfuric acid at ambient temperature, and the cation could be used for facile syntheses of 4-isopropenyl phenol (IPP), IPP dimers, and spiro-bisphenol derivatives.     

Aggregation of acetic and propionic acid in argon matrices--a matrix isolation and computational study

Monomeric acetic acid MA and propionic acid MP were isolated in argon matrices at 10K by using a pulse deposition technique. The dimerization of the monomers was induced by warming the matrices from 10 to 40 K. Under these conditions the diffusion of small trapped molecules is rapid and the dimerization could be monitored directly by IR spectroscopy. Both carboxylic acids form the symmetrical dimers B with two strong C=O...HO hydrogen bridges as the thermodynamically most stable dimers. With acetic acid a less stable dimer AA could be obtained if high concentrations of acetic acid in argon were used during the deposition of the matrix. On annealing this dimer rearranges to the more stable BA. In contrast, propionic acid does not form a corresponding less stable dimer under any experimental condition. These observations are rationalized on the basis of DFT and ab initio calculations.     

Stilbenoids in lianas of Gnetum parvifolium.

Five new stilbene dimers were isolated from the lianas of Gnetum parvifolium in addition to known stilbenoids. The structures of the compounds were established on the basis of spectroscopic evidence, including long-range coupling and nuclear Overhauser effect experiments, in NMR spectrum. Among the isolates, 2b-hydroxyampelopsin F showed potent inhibitory activity in the Maillard reaction.     

Achillinin B and C,new sesquiterpene dimers isolated from Achillea millefolium

Two novel sesquiterpene dimers, achillinin B and C, were isolated from the flowers of Achillea millefolium. The structures were elucidated by extensive spectroscopic analysis. A plausible biosynthetic pathway of achillinin B and C by Diels–Alder reaction of the corresponding guaiane sesquiterpenoids is also discussed.