Ambidentate coordination of dimethyl sulfoxide in rhodium(III) complexes

The two dimethyl sulfoxide solvated rhodium(III) compounds, [Rh(dmso-κO)(5)(dmso-κS)](CF(3)SO(3))(3) (1 & 1* at 298 K and 100 K, respectively) and [Rh(dmso-κO)(3)(dmso-κS)(2)Cl](CF(3)SO(3))(2) (2), crystallize with orthorhombic unit cells in the space group Pna2(1) (No. 33), Z = 4. In the [Rh(dmso)(6)](3+) complex with slightly distorted octahedral coordination geometry, the Rh-O bond distance is significantly longer with O trans to S, 2.143(6) ? (1) and 2.100(6) ? (1*), than the mean Rh-O bond distance with O trans to O, 2.019 ? (1) and 2.043 ? (1*). In the [RhCl(dmso)(5)](3+) complex, the mean Rh-O bond distance with O trans to S, 2.083 ?, is slightly longer than that for O trans to Cl, 2.067(4) ?, which is consistent with the trans influence DMSO-κS > Cl > DMSO-κO of the opposite ligands. Raman and IR absorption spectra were recorded and analyzed and a complete assignment of the vibrational bands was achieved with support by force field calculations. An increase in the Rh-O stretching vibrational frequency corresponded to a decreasing trans-influence from the opposite ligand. The Rh-O force constants obtained were correlated with the Rh-O bond lengths, also including previously obtained values for other M(dmso)(6)(3+) complexes with trivalent metal ions. An almost linear correlation was obtained for the MO stretching force constants vs. the reciprocal square of the MO bond lengths. The results show that the metal ion-oxygen bonding of dimethyl sulfoxide ligands is electrostatically dominated in those complexes and that the stretching force constants provide a useful measure of the relative trans-influence of the opposite ligands in hexa-coordinated Rh(III)-complexes.     

The hydration of the scandium(III) ion in aqueous solution and crystalline hydrates studied by XAFS spectroscopy, large-angle X-ray scattering and crystallography

The structures of the hydrated scandium(III) ion and of the hydrated dimeric hydrolysis complex, [Sc2(mu-OH)2]4+, in acidic aqueous solutions have been characterized by X-ray absorption fine structure (XAFS) and large-angle X-ray scattering (LAXS) methods. Comparisons with crystalline reference compounds containing hydrated scandium(III) ions in well characterized six-, seven- and eight-coordinated polyhedra have been used to evaluate the coordination numbers and configurations in aqueous solution. In strongly acidic aqueous solution the structure of the hydrated scandium(III) ion is found to be similar to that of the eight-coordinated scandium(III) ion with distorted bicapped trigonal prismatic coordinating geometry in the crystalline [Sc(H2O)(8.0)](CF3SO3)3 compound. The EXAFS data reveal for the solution, as for the solid, a mean Sc-O bond distance of 2.17(1) Angstrom to six strongly bound prism water molecules, 2.32(4) Angstrom to one capping position, with possibly another capping position at about 2.5 Angstrom. The LAXS study supports this structural model and shows furthermore a second hydration sphere with approximately 12 water molecules at a mean Sc...O(II) distance of 4.27(3) Angstrom. In less acidic concentrated scandium(III) aqueous solutions, the dimeric hydrolysis product, [Sc2(mu-OH)2(H2O)10]4+, is the predominating species with seven-coordinated scandium(III) ions in a double hydroxo bridge and five terminal water molecules at a mean Sc-O bond distance of 2.145 Angstrom. Hexahydrated scandium(III) ions are found in the crystal structure of the double salt [Sc(H2O)6][Sc(CH3SO3)6], which crystallizes in the trigonal space group R3[combining macron] with Z = 6 and the unit cell dimensions a = 14.019(2) and c = 25.3805(5) Angstrom. The Sc-O distances in the two crystallographically unique, but nearly identical, [Sc(H2O)6]3+ entities (both with 3[combining macron] imposed crystallographic symmetry) are 2.085(6) and 2.086(5) Angstrom, while the mean Sc-O distance in the near octahedral [Sc(OSO2CH3)6]3- entities (with three-fold symmetry) is 2.078 Angstrom.     

Structure of solvated metal ions in nitrate and chloride solutions of erbium(III) and yttrium(III) in dimethyl sulfoxide

X-ray diffraction measurements on 1M yttrium(III) and erbium(III) nitrate and chloride solutions in dimethyl sulfoxide (DMSO) have shown that Er(III) and Y(III) solutions of equal compositions are isostructural. The intensity difference functions can then be used to derive the detailed structure of the coordination sphere around the metal ions. The DMSO molecules are coordinated over oxygen with average M-O-S bond angles of about 130°. Two different conformations, corresponding to different relative orientations of the M-O and O-S bonds, seem to be prevalent. In the nitrate solutions an average of about 1.5 nitrate ions are coordinated as bidentate ligands to each metal ion. In the chloride solutions about 1.3 chloride ions belong to the inner-coordination sphere.On leave from the Department of Inorganic Chemistry, Royal Institute of Technology, S-10044 Stockholm, Sweden     

An EXAFS spectroscopic, large-angle X-ray scattering, and crystallographic study of hexahydrated, dimethyl sulfoxide and pyridine 1-oxide hexasolvated mercury(II) ions

The structure of the solvated mercury(II) ion in water and dimethyl sulfoxide has been studied by means of large-angle X-ray scattering (LAXS) and extended X-ray absorption fine structure (EXAFS) techniques. The distribution of the Hg-O distances is unusually wide and asymmetric in both solvents. In aqueous solution, hexahydrated [Hg(OH(2))(6)](2+) ions in a distorted octahedral configuration, with the centroid of the Hg-O distance at 2.38(1) A, are surrounded by a diffuse second hydration sphere with HgO(II) distances of 4.20(2) A. In dimethyl sulfoxide, the six Hg-O and HgS distances of the hexasolvated [Hg{OS(CH(3))(2)}(6)](2+) complex are centered around 2.38(1) and 3.45(2) A, respectively. The crystal structure of hexakis(pyridine 1-oxide)mercury(II) perchlorate has been redetermined. The space group R(-)3 implies six equal Hg-O distances of 2.3416(7) A for the [Hg(ONC(5)H(5))(6)](2+) complex at 100 K. However, EXAFS studies of this compound, and of the solids hexaaquamercury(II) perchlorate and hexakis(dimethyl sulfoxide)mercury(II) trifluoromethanesulfonate, also with six equidistant Hg-O bonds according to crystallographic results, reveal in all cases strongly asymmetric Hg-O distance distributions. Vibronic coupling of valence states in a so-called pseudo-Jahn-Teller effect probably induces the distorted configurations.     

Molecular complexes of dimethyl sulfoxide with tri‐ and dichloromethane

Crystals of molecular complexes of dimethyl sulfoxide with trichloromethane (chloroform), (CH₃)₂SO·2CHCl₃, (I), and dichloromethane, (CH₃)₂SO·CH₂Cl₂, (II), have been grown in situ. In both compounds, the components are linked together by (Cl)C—H...O interactions. The dimethyl sulfoxide molecules in (I) are bound into chains by C—H...O interactions. In (II), pairs of the components form centrosymmetric rings, linked into a three‐dimensional network by C—H...O contacts and dipole–dipole interactions between dimethyl sulfoxide molecules.     

Highly hydrated cations: deficiency, mobility, and coordination of water in crystalline nonahydrated scandium(III), yttrium(III), and lanthanoid(III) trifluoromethanesulfonates

Trivalent lanthanide-like metal ions coordinate nine water oxygen atoms, which form a tricapped trigonal prism in a large number of crystalline hydrates. Water deficiency, randomly distributed over the capping positions, was found for the smallest metal ions in the isomorphous nonahydrated trifluoromethanesulfonates, [M(H2O)n](CF3SO3)3, in which M = Sc(III), Lu(III), Yb(III), Tm(III) or Er(III). The hydration number n increases (n = 8.0(1), 8.4(1), 8.7(1), 8.8(1) and 8.96(5), respectively) with increasing ionic size. Deuterium (2H) solid-state NMR spectroscopy revealed fast positional exchange between the coordinated capping and prism water molecules; this exchange started at temperatures higher than about 280 K for lutetium(III) and below 268 K for scandium(III). Similar positional exchange for the fully nonahydrated yttrium(III) and lanthanum(III) compounds started at higher temperatures, over about 330 and 360 K, respectively. An exchange mechanism is proposed that can exchange equatorial and capping water molecules within the restrictions of the crystal lattice, even for fully hydrated lanthanoid(III) ions. Phase transitions occurred for all the water-deficient compounds at approximately 185 K. The hydrated scandium(III) trifluoromethanesulfonate transforms reversibly (DeltaH degrees = -0.80(1) kJ mol(-1) on cooling) to a trigonal unit cell that is almost nine times larger, with the scandium ion surrounded by seven fully occupied and two partly occupied oxygen atom positions in a distorted capped trigonal prism. The hydrogen bonding to the trifluoromethanesulfonate anions stabilises the trigonal prism of water ligands, even for the crowded hydration sphere of the smallest metal ions in the series. Implications for the Lewis acid catalytic activity of the hydrated scandium(III) and lanthanoid(III) trifluoromethanesulfonates for organic syntheses performed in aqueous media are discussed.     

Dimeric molecular association of dimethyl sulfoxide in solutions of nonpolar liquids

Although many vibrational spectroscopic studies using infrared (IR) absorption and Raman scattering (RS) techniques revealed that dimethyl sulfoxide (DMSO) forms intermolecular dimeric associations in the pure liquid state and in solutions, the results of a number of dielectric relaxation studies did not clearly show the presence of such dimers. Recently, we found the presence of dimeric DMSO associations in not only the pure liquid but also in solutions of nonpolar solvents, such as tetrachloromethane (CCl(4)) and benzene (Bz), using dielectric relaxation (DR) techniques, which ranged from 50 MHz to 50 GHz at 25 °C. The dimeric DMSO associations cause a slow dielectric relaxation process with a relaxation time of ca. 23 ps for solutions in CCl(4) (ca. 17 ps in Bz) due to the dissociation into monomeric DMSO molecules, while the other fast relaxation is caused by monomeric DMSO molecules with a relaxation time of ca. 5.0 ps (ca. 5.5 ps in Bz) at 25 °C. A comparison of DR and vibrational spectroscopic data for DMSO solutions demonstrated that the concentration dependence of the relative magnitude of the slow and fast DR strength corresponds well to the two IR and RS bands assigned to the vibrational stretching modes of the sulfoxide groups (S═O) of the dimeric associations and the monomeric DMSO molecules, respectively. Moreover, the concentrations of the dimeric associations ([DIM]) and monomeric DMSO molecules ([MON]) were governed by a chemical equilibrium and an equilibrium constant (K(d) = [DIM](2)[MON](-1)) that was markedly dependent on the concentration of DMSO and the solvent species (K(d) = 2.5 ± 0.5 M(-1) and 0.7 ± 0.1 M(-1) in dilute CCl(4) and Bz solutions, respectively, and dramatically increased to 20-40 M(-1) in pure DMSO at 25 °C).     

Formation and characterization of the oxygen-rich scandium oxide/dioxygen complexes ScOn (n = 4, 6, 8) in solid argon

The reactions of scandium atoms and O(2) have been reinvestigated using matrix isolation infrared spectroscopy and density functional theory calculations. A series of new oxygen-rich scandium oxide/dioxygen complexes were prepared and characterized. The ground state scandium atoms react with dioxygen to form OSc(eta(2)-O(3)), a side-on bonded scandium monoxide-ozonide complex. The OSc(eta(2)-O(3)) complex rearranges to a more stable Sc(eta(2)-O(2))(2) isomer under visible light irradiation, which is characterized to be a side-on bonded superoxo scandium peroxide complex. The homoleptic trisuperoxo scandium complex, Sc(eta(2)-O(2))(3), and the superoxo scandium bisozonide complex, (eta(2)-O(2))Sc(eta(2)-O(3))(2), are also formed upon sample annealing. The Sc(eta(2)-O(2))(3) complex is determined to have a D(3h) symmetry with three equivalent side-on bonded superoxo ligands around the scandium atom. The (eta(2)-O(2))Sc(eta(2)-O(3))(2) complex has a C(2) symmetry with two equivalent side-on bonded O3 ligands and one side-on bonded superoxo ligand.     

Magnetic properties and crystal structure of a one-dimensional phase of tetrakis(mu2-benzoato-O,O')-bis(dimethyl sulfoxide)dicopper(II)

A new crystalline polymorphic phase of tetrakis(mu2-benzoato-O,O')-bis(dimethyl sulfoxide)dicopper(II) was obtained by direct synthesis, in space group P2(1)/n. The copper coordination is in a slightly distorted square pyramidal geometry with an intramolecular Cu...Cu distance of 2.6494(8) angstroms. The Cu-O distances of the two copper in a dimer are different, giving different chemical environments for each Cu ion. The crystal structure is built up of well-separated stacking columns oriented along the b-axis, with units uniformly spaced, producing a one-dimensional (1-D) zigzag chain through Cu(II)-S...S-Cu(II) interdimer interactions [S...S separation: 3.975(2) angstroms]. Magnetization measurements in the range 2-300 K indicate two magnetic orderings, at low temperature (T < 10 K) a weak ferromagnetic ordering is observed, and above this temperature an antiferromagnetic behavior takes place. ESR spectra at 300 and 77 K of a polycrystalline sample show the characteristic signal of zero-field with D = 0.354 cm(-1), consistent with a ferromagnetic Cu...Cu exchange interaction at low temperature.     

Covalency of Sc(III), Y(III), Ln(III) and An(III) as manifested in the enthalpies of solution of anhydrous rare earth halides

The position of scandium and yttrium within lanthanides in respect to the enthalpies of solution of anhydrous rare earth halides has been discussed. It has been indicated that although the respective shift of Sc(III) as a quasi-heavy lanthanide is less pronounced than for Y(III), the overall covalency within the trivalent ions of the scandium group, Ln(III) and An(III) included, is the most pronounced for Sc(III) due to participation of the empty orbitals in bonding: Sc(III)>An(III)>Ln(III)> Y(III). The irregularity of this trend is produced by the superimposed participation of the 5f (An(III)) and, to a lesser extent, of the 4f (Ln(III)) orbitals in bonding. The crucial factor of a maximum difference between the product and substrate coordination number (CN) of the central ion for covalency, separation factor and isotope effect in chemical exchange is emphasized.     

Thermodynamic and spectroscopic studies of lanthanides(III) complexation with polyamines in dimethyl sulfoxide

The thermodynamic parameters of complexation of Ln(III) cations with tris(2-aminoethyl)amine (tren) and tetraethylenepentamine (tetren) were determined in dimethyl sulfoxide (DMSO) by potentiometry and calorimetry. The excitation and emission spectra and luminescence decay constants of Eu3+ and Tb3+ complexed by tren and tetren, as well as those of the same lanthanides(III) complexed with diethylenetriamine (dien) and triethylenetetramine (trien), were also obtained in the same solvent. The combination of thermodynamic and spectroscopic data showed that, in the 1:1 complexes, all nitrogens of the ligands are bound to the lanthanides except in the case of tren, in which the pendant N is bound. For the larger ligands (trien, tren, tetren) in the higher complexes (ML2), there was less complete binding by available donors, presumably due to steric crowding. FT-IR studies were carried out in an acetonitrile/DMSO mixture, suitably chosen to follow the changes in the primary solvation sphere of lanthanide(III) due to complexation of amine groups. Results show that the mean number of molecules of DMSO removed from the inner coordination sphere of lanthanides(III) is lower than ligand denticity and that the coordination number of the metal ions increases with amine complexation from approximately 8 to approximately 10. Independently of the number and structure of the amines, linear trends, similar for all lanthanides, were obtained by plotting the values of DeltaGj degrees, DeltaHj degrees, and TDeltaSj degrees for the complexation of ethylenediamine (en), dien, trien, tren, and tetren as a function of the number of amine metal-coordinated nitrogen atoms. The main factors on which the thermodynamic functions of lanthanide(III) complexation reactions in DMSO depend are discussed.     

Rates of ligand substitution by bromide,thiocyanate, and azide lons at iron (III) ion in dimethyl sulfoxide as solvent

Rate constants for ligand substitution by bromide, thiocyanate and azide ions at iron(III) ion in dimethyl sulfoxide as solvent, determined by stopped-flow spectrophotometry, are similar and are consistent with a dissociative mechanism. In addition, azide ion gives a second much slower, reaction, attributed to formation of a binuclear complex. Results of similar measurements with thiocyanate ion in acetonitrile were more complicated, attributed to a marked influence of residual water on the reactivity of iron (III) ion.     

Extraction of scandium(III) by bis(diphenylphosphorylmethylcarbamoyl)alkanes

The extraction of trace amounts of scandium(III) from HCl,HNO₃, and HClO₄ solutions in the form of complexes with neutral polyfunctional organophosphorus compounds bis(diphenylphosphorylmethylcarbamoyl)alkanes [Ph₂P(O)CH₂C(O)NH]₂(CH₂) _n (n = 3, 5, 8) was studied. The effect of the structure of the extractant, the aqueous phase composition, and the nature of the organic solvent on the efficiency of transition of scandium(III) ions into the organic phase was considered, and the stoichiometry of the extracted complexes was determined. The studied ligands exhibit a higher extraction power toward scandium(III) ions than their analog Ph₂P(O)CH₂C(O)NHC₉H₁₉ containing only one bidentate carbamoylmethylphosphoryl moiety per molecule. Scandium(III) passes into the organic phase most efficiently in the presence of HClO4 in the aqueous phase. It was shown that scandium(III) can be selectively recovered and preconcentrated by a complexing adsorbent obtained by noncovalent immobilization of bis(diphenylphosphorylmethylcarbamoyl)pentane on a macroporous polymer matrix.     

Thermal decomposition of scandium(III) benzenetricarboxylates in air and nitrogen atmospheres

The conditions of thermal decomposition of scandium(III) hemimellitate, trimellitate and trimezinate in air and nitrogen atmospheres have been studied. On heating, the benzene-tricarboxylates of Sc(III) decompose in two stages. First, the hydrated complexes lose crystallization water; heating in air finally yields Sc₂O₃, and heating in a nitrogen atmosphere Sc₂O₃ and C. The dehydration of the complexes is associated with strong endothermic effects. The decomposition of benzenetricarboxylates in air is accompanied by an exothermic effect and in nitrogen by an endothermic effect. The activation energies of the dehydration and decomposition reactions have been calculated for the Sc(III) benzenetricarboxylates.     

Steric effects control the structure of the solvated lanthanum(III) ion in aqueous, dimethyl sulfoxide, and N,N'-dimethylpropyleneurea solution. An EXAFS and large-angle X-ray scattering study

The structure of the solvated lanthanum(III) ion has been determined in aqueous, dimethyl sulfoxide, and N,N'-dimethylpropyleneurea solution by means of the EXAFS and large-angle X-ray scattering (LAXS) techniques. The close agreement between the EXAFS spectra of solid nonaaqualanthanum(III) trifluoromethanesulfonate and of an aqueous lanthanum(III) perchlorate solution shows that the hydrated lanthanum(III) ion in aqueous solution most probably has the same structure as in the solid, i.e., nine water molecules coordinated in a tricapped trigonal prismatic configuration. The data analysis from EXAFS and LAXS measurements of the aqueous solution resulted in the La-O bond distances 2.52(2) and 2.65(3) A to the water molecules in the prism and the capping positions, respectively. The LAXS study shows a second hydration sphere consistent with approximately 18 water molecules at 4.63(2) A. The EXAFS spectra of solid octakis(dimethyl sulfoxide)lanthanum(III) trifluoromethanesulfonate and a dimethyl sulfoxide solution of this salt are also similar. The data analysis of EXAFS and LAXS measurements assuming eight-coordination around lanthanum yielded an La-O bond distance of 2.50(2) A, and an La...S distance of 3.70(3) A, giving an La-O-S angle of 133(2) degrees. The EXAFS data of an N,N'-dimethylpropyleneurea solution of lanthanum(III) trifluoromethanesulfonate gave the La-O bond distance 2.438(4) A and the La...C distance 3.41(2) A, which correspond to an La-O-C angle of 131(2) degrees. The La-O bond distance is consistent with seven-coordination around lanthanum, on the basis of the variation of the ionic radii of the lanthanum(III) ion with different coordination numbers.     

The resonance Raman effect of uranyl formate in dimethyl sulfoxide

The resonance Raman scattering spectra of uranyl formate (UO(2)(HCOO)(2)) in dimethyl sulfoxide ((CH(3))(2)SO, DMSO) have been measured under laser excitation of the uranyl ion in resonance with the 1Sigma(g)(+)-->(1)Phi(g) Laport forbidden f-f electronic transitions (ranging from 510 to 450 nm) by using ten output lines with wavelength ranging from 528.7 to 454.5 nm of the argon-ion laser at room temperature. The observed resonance excitation profile resembles the vibronic structure of the electronic absorption spectrum (ABS) but does not completely superimpose on it. Such a discrepancy is quantitatively explained by the interference effect, which occurs noticeably in the UO(2)L(2) (L=NO(3), CH(3)COO, Cl or HCOO)-DMSO system. Transform theory that makes use of the electronic ABS of the resonant electronic state has been applied to predict the Raman excitation profile (REP) of the uranyl totally symmetric stretching vibrational mode. Comparing the experimental REP with the transform theory prediction, it is found that the resonance Raman intensities of this stretching mode depend mainly on the vibronic interaction (non-Condon effect) in excited electronic states. Reliable value of the nuclear displacement on going the 1Sigma(g)(+)-->(1)Phi(g) electronic transition and the amount of charge transferred from the ligand to uranium of uranyl ion both in the ground and excited states are obtained. Elongation of the U-O equilibrium bond length due to the electronic transition is related to the magnitude of the change in the excitation profile, and has linear relation to the change in the amount of charge transferred from the ligand to uranium of uranyl ion in UO(2)L(2) type uranyl compounds in DMSO.     

Molecular structure of tris(acetylacetonato)scandium Sc(C5H7O2)3

Molecular structure of tris(acetylacetonato)scandium, Sc(C₅H₇O₂)₃, is investigated by gas-phase electron diffractometry. The main structural parameters of the molecule are evaluated. The average internuclear distances and angles correspond to C₃ symmetry. The chief structural motif is trigonal antiprisms of six oxygen, carbon, and hydrogen atoms with a scandium atom at the center. It is found that r_g(Sc-O) = 204.1(8) pm and r_g(C-O) = 124.7(4) pm. Translated fromZhumal Strukturnoi Khimii, Vol. 39, No. 4, pp. 633–639, July–August, 1998.     

Interaction of product analogues with the active site of rhodobacter sphaeroides dimethyl sulfoxide reductase

We report a structural characterization using X-ray absorption spectroscopy of Rhodobacter sphaeroides dimethyl sulfoxide (DMSO) reductase reduced with trimethylarsine and show that this is structurally analogous to the physiologically relevant dimethyl sulfide reduced DMSO reductase. Our data unambiguously indicate that these species should be regarded as formal MoIV species and indicate a classical coordination complex of trimethylarsine oxide, with no special structural distortions. The similarity of the trimethylarsine and dimethyl sulfide complexes suggests, in turn, that the dimethyl sulfide reduced enzyme possesses a classical coordination of DMSO with no special elongation of the S-O bond, as previously suggested.     

Scandium(III) coordination polymers containing capsules based on two p-sulfonatocalix[4]arenes

Reactions of sodium p-sulfonatocalix[4]arene and scandium(III) tristriflate in the presence, and absence, of [18]crown-6 give the crystalline complexes [Sc2(mu-OH)2(H2O)10][Na4(H2O)8-[calix[4]arene(SO3)4]2).13 H2O and [[Sc2(mu-OH)2(H2O)8][Sc(H2O)4]2[calix[4]-arene(SO3)4-H+]2([18]crown-6).16H2O. Both complexes involve novel coordination polymers with calixarene units linked through sodium or scandium centers and also feature capsule assemblies through to the head-to-head association of calixarenes. A linear array of capsules associated with an infinite chain of aquo-bridged sodium ions, and an aquated hydroxy-bridged scandium(III) dimer, [Sc2(mu-OH)2(H2O)10]4+, are found in the absence of the crown ether. In the presence of [18]crown-6 both hydrated scandium monomers and dimers bridge between calixarenes in a two-dimensional coordination network. The crown ethers reside in cavities created by two calixarenes from adjacent polymeric sheets via a variety of supramolecular interactions(hydrogen-bonding, shape complementarity), and effectively add a third dimension to the network. The extended structure of both of these polymers is highly porous, and resembles a bilayer.