Specific heat spectra of non-interacting fermions in a quasiperiodic ladder sequence

We compute the specific heat spectra of non-interacting fermions whose energy spectrum was obtained from a quasiperiodic ladder sequence (Fibonacci and Rudin-Shapiro type), mimicking a DNA molecule model. The specific heat is calculated from their underlying multi-fractal energy spectrum, considering several values of energy densities. Comparisons are made with a real DNA sequence, namely the human chromosome 22 (Ch22).     

Low-temperature specific heat spectra considering nonextensive long-range correlated quasiperiodic DNA molecules

We consider the low-temperature specific heat spectra of long-range correlated quasiperiodic DNA molecules using a q-gaussian distribution, and compare them with those considering the Boltzmann-Gibbs distribution. The energy spectra are calculated using the one-dimensional Schrödinger equation in a tight-binding approximation with the on-site energy exhibiting long-range disorder and non-random hopping amplitudes. We focus our attention at the low temperature region, where the specific heat spectra presents a logarithmic-periodic oscillations as a function of the temperature T around a mean value given by a characteristic dimension of the energy spectrum.     

Electronic density of states in sequence dependent DNA molecules

We report in this work a numerical study of the electronic density of states (DOS) in π-stacked arrays of DNA single-strand segments made up from the nucleotides guanine G, adenine A, cytosine C and thymine T, forming a Rudin-Shapiro (RS) as well as a Fibonacci (FB) polyGC quasiperiodic sequences. Both structures are constructed starting from a G nucleotide as seed and following their respective inflation rules. Our theoretical method uses Dyson’s equation together with a transfer-matrix treatment, within an electronic tight-binding Hamiltonian model, suitable to describe the DNA segments modelled by the quasiperiodic chains. We compared the DOS spectra found for the quasiperiodic structure to those using a sequence of natural DNA, as part of the human chromosome Ch22, with a remarkable concordance, as far as the RS structure is concerned. The electronic spectrum shows several peaks, corresponding to localized states, as well as a striking self-similar aspect.     

Electronic transport in double-strand poly(dG)-poly(dC) DNA segments

We study the electronic properties of a double-strand quasiperiodic DNA molecule modeled by a one-dimensional effective Hamiltonian, which includes contributions from the nucleobasis system as well as the sugar-phosphate backbone. Our theoretical approach makes use of Dyson's equation together with a transfer-matrix treatment, considering an electronic tight-binding Hamiltonian model to investigate the electronic density of states (DOS) and the electronic transmissivity of sequences of DNA finite segments. To mimic the DNA segments, we consider the finite quasiperiodic sequences of Fibonacci's type, in a poly(dG)-poly(dC) configuration, whose building blocks are the bases guanine G and cytosine C. We compared the electronic transport found for the quasiperiodic structure to those using a sequence of natural DNA, as part of the human chromosome Ch22.     

Entanglement in One-Dimensional Anderson Model with Long-Range Correlated Disorder

By using the measure of concurrence, the entanglement of the ground state in the one-dimensional Anderson model is studied with consideration of the long-range correlations. Three kinds of correlations are discussed. We compare the effects of the long-rang Gaussian and power-law correlations between the site energies on the concurrence, and demonstrate the existence of the band structure of the concurrence in the power-law case. The emergence of the sharp kink on the concurrence curve shown in the intraband or in the interband indicates the position at which the localization extent of the state may have the severe variation. We use the Rudin-Shapiro model to describe the site energy distribution of the nucleotides of the DNA chain： guanine （G）, adenine （A）, cytosine（C）, thymine （T）. This model is a tetradic quasiperiodic sequence and is shown to be long-range correlated. Our results show that correlations between the site energies increase the concurrences.     

Long-range correlations and charge transport properties of DNA sequences

By using Hurst's analysis and transfer approach, the rescaled range functions and Hurst exponents of human chromosome 22 and enterobacteria phage lambda DNA sequences are investigated and the transmission coefficients, Landauer resistances and Lyapunov coefficients of finite segments based on above genomic DNA sequences are calculated. In a comparison with quasiperiodic and random artificial DNA sequences, we find that λ-DNA exhibits anticorrelation behavior characterized by a Hurst exponent 0.5<H<1 while, as far as the segments selected in our Letter are concerned, Ch22 sequence displays a transition from correlation behavior to anticorrelation behavior. The resonant peaks of the transmission coefficient in genomic sequences can survive in longer sequence length than in random sequences but in shorter sequence length than in quasiperiodic sequences. It is shown that the genomic sequences have long-range correlation properties to some extent but the correlations are not strong enough to maintain the scale invariance properties.     

A renormalization approach to describe charge transport in quasiperiodic dangling backbone ladder (DBL)-DNA molecules

We study the charge transport properties of a dangling backbone ladder (DBL)-DNA molecule focusing on a quasiperiodic arrangement of its constituent nucleotides forming a Rudin-Shapiro (RS) and Fibonacci (FB) Poly (CG) sequences, as well as a natural DNA sequence (Ch22) for the sake of comparison. Making use of a one-step renormalization process, the DBL-DNA molecule is modeled in terms of a one-dimensional tight-binding Hamiltonian to investigate its transmissivity and current-voltage (I-V) profiles. Beyond the semiconductor I-V characteristics, a striking similarity between the electronic transport properties of the RS quasiperiodic structure and the natural DNA sequence was found.     

Electronic properties of a class of one-dimensional quasiperiodic systems

Electronic properties of a class of one-dimensional quasiperiodic systems are studied by the extended Kohmoto-Kadanoff-Tang (KKT) renormalization-group method. The employed models are tight-binding diagonal and off-diagonal models. It is showed that the energy spectra of the quasiperiodic systems are Cantor-like, namely the spectra are self-similar and the energy gaps are every-where dense on the realE-line.     

Special interaction between quasiperiodic grain boundaries and lattice dislocations in crystalline solids

A theoretical model is suggested which describes phason imperfections (specific excitations) in a quasiperiodic grain boundary in a polycrystalline solid as dilatation flexes. In the framework of the model, an elastic stress field of the quasiperiodic grain boundary is calculated as a stress field created by an ensemble of dilatation flexes (phason imperfections) located in the boundary. It is shown that there is a special elastic interaction between crystal lattice defects and quasiperiodic grain boundaries comprising phason imperfections. The strengthening effect in plastically deformed polycrystalline solids is quantitatively described which is related to the special elastic interaction between lattice dislocations and quasiperiodic grain boundaries. Received: 29 October 1996 / Revised: 22 August 1997 / Accepted: 13 November 1997     

Quasiperiodically driven Josephson junctions: strange nonchaotic attractors, symmetries and transport

We consider the dynamics of the overdamped Josephson junction under the influence of an external quasiperiodic driving field. In dependence on parameter values either a quasiperiodic motion or a strange nochaotic attractor (SNA) can be observed. The latter corresponds to a resistive state in the current-voltage characteristics while for quasiperiodic motion a finite superconducting current exists for zero voltage. It is shown that in the case of SNA a nonzero mean voltage across the junction can appear due to symmetry breakings. Based on this observation a detailed symmetry consideration of the generalized equation of motion is performed and symmetry conditions ensuring zero mean voltage across the junction are found. Received 16 August 2001 and Received in final form 22 January 2002     

Phonon dispersion in quasiperiodic semiconductor superlattices

The phonon spectra of unstrained and strained quasiperiodic semiconductor superlattices (QSSL) have been calculated using one-dimensional linear chain model. We consider two types of quasiperiodic systems, namely cantor triadic bar (CTB) and Fibonacci sequences (FS), constituting of AlAs, GaAs and GaSb of which the latter two have a lattice mismatch of about 7%. The calculations have been made using transfer matrix method and also with and without the inclusion of strain. We present the results on phonon spectra of two component CTB and two as well as three component FS semiconductor superlattices (SSL), thickness and order dependence on LO mode of GaAs, effect of strain on LO frequency of GaAs. The calculated results show that the strain generated due to lattice mismatch reduces significantly the magnitudes of the confined optical phonon frequency of GaAs.     

Fractal spectra in generalized Fibonacci one-dimensional magnonic quasicrystals

In this work we carry out a theoretical analysis of the spectra of magnons in quasiperiodic magnonic crystals arranged in accordance with generalized Fibonacci sequences in the exchange regime, by using a model based on a transfer-matrix method together random-phase approximation (RPA). The generalized Fibonacci sequences are characterized by an irrational parameter σ(p,q)$\sigma (p,q)$, which rules the physical properties of the system. We discussed the magnonic fractal spectra for first three generalizations, i.e., silver, bronze and nickel mean. By varying the generation number, we have found that the fragmentation process of allowed bands makes possible the emergence of new allowed magnonic bulk bands in spectra regions that were magnonic band gaps before, such as which occurs in doped semiconductor devices. This interesting property arises in one-dimensional magnonic quasicrystals fabricated in accordance to quasiperiodic sequences, without the need to introduce some deferent atomic layer or defect in the system. We also make a qualitative and quantitative investigations on these magnonic spectra by analyzing the distribution and magnitude of allowed bulk bands in function of the generalized Fibonacci number F_n and as well as how they scale as a function of the number of generations of the sequences, respectively.     

Low-temperature properties of ferromagnetic Fibonacci superlattices

Theoretical analysis of the layered quasi-periodic Fibonacci structures (superlattices-sequence) is presented for the systems consisting of n_A and n_B ferromagnetically ordered planes within the layers with S_a and S_b spins, respectively, while the interfaces are coupled with bilinear and/or biquadratic exchange interaction, within the framework of localized spin model in the low-temperature limit. Transfer matrix method and direct diagonalization after the bosonization in Bloch's approximation resulted both in the same analytical expression for the magnon-excitation energy. The equivalence (at low-temperatures) of the transfer matrix (spin) and boson approach was discussed, as well as the role of the interlayer biquadratic coupling between different blocks constituting the Fibonacci sequences. Also, our approach allows the determination of the internal energy and calculation of the magnon contribution to the specific heat. It was clearly demonstrated that the magnon specific heat vanishes for T → 0. Our results are compared with the results of other authors.     

The DNA electronic specific heat at low temperature: The role of aperiodicity

The electronic specific heat spectra at constant volume (_CV$C_V$) of a long-range correlated extended ladder model, mimicking a DNA molecule, is theoretically analyzed for a stacked array of a double-stranded structure made up from the nucleotides guanine G, adenine A, cytosine C and thymine T  . The role of the aperiodicity on _CV$C_V$ is discussed, considering two different nucleotide arrangements with increasing disorder, namely the Fibonacci and the Rudin–Shapiro quasiperiodic structures. Comparisons are made for different values of the band fillings, considering also a finite segment of natural DNA, as part of the human chromosome Ch22.     

Spectral properties of quasiperiodic superlattices and study of wave functions

We report the study of the spectral properties of a quasiperiodic superlattice within a tight binding model. Numerical work is carried out using the transfer matrix method. An approximate analytical scheme is used to obtain expressions for the band gaps which explain all the features obtained numerically. Due to the fact that blocks of atoms are repeated quasiperiodically, the gaps are shown to vanish at specific energies. These states have much the same behaviour as the extended states but the amplitude is a quasiperiodic function of the site index. The total number of such extended states are estimated. Since it is known that other states in quasiperiodic systems are critical, these states are expected to exhibit a cross-over behaviour to the critical states as a function of the energy. Multifractal analysis of the quasiperiodic wave function show that it has the same signature as the extended wave function. We briefly comment on the cross-over behaviour.     

准周期对spin-Peierls模型中晶格畸变和能隙的影响

采用严格对角化方法和自洽方法，研究准周期相互作用对spin-Peierls模型中晶格畸变和能隙的影响.研究表明，引入准周期作用后，spin-Peierls模型中晶格畸变和能谱表现出准周期结构的自相似特性.另外，在弹性系数K取不同值时，随着准周期作用强度的增强，晶格畸变的平均值可能会增大、减小或先增大后减小，其对应的能隙也有相似的行为. 关键词： 准周期相互作用 spin-Peierls模型     

Optical transmission spectra in symmetrical Fibonacci photonic multilayers

We study the transmission properties of light through the symmetric Fibonacci photonic multilayers, i.e, a binary one-dimensional quasiperiodic structure, made up of both positive (SiO₂) and negative refractive index materials with a mirror symmetry. These spectra are calculated by using a theoretical model based on the transfer matrix approach for normal incidence geometry, in which many perfect transmission peaks (the transmission coefficients are equal to the unity) are numerically obtained. Besides, the transmission coefficient exhibits a six-cycle self-similar behavior with respect to the generation number of the Fibonacci sequence.     

Current-voltage characteristics of double-strand DNA sequences

We use a tight-binding formulation to investigate the transmissivity and the current-voltage (I-V) characteristics of sequences of double-strand DNA molecules. In order to reveal the relevance of the underlying correlations in the nucleotides distribution, we compare the results for the genomic DNA sequence with those of artificial sequences (the long-range correlated Fibonacci and Rudin-Shapiro one) and a random sequence, which is a kind of prototype of a short-range correlated system. The random sequence is presented here with the same first neighbors pair correlations of the human DNA sequence. We found that the long-range character of the correlations is important to the transmissivity spectra, although the I-V curves seem to be mostly influenced by the short-range correlations.     

Heat capacity of Heusler alloys: Ferromagnetic Ni2MnSb,Ni2MnSn,NiMnSb and antiferromagnetic CuMnSb

We report the results of the investigation of the specific heat of the ferromagnetic Heusler Ni₂MnSn, Ni₂MnSb, NiMnSb and antiferromagnetic CuMnSb alloys. The low-temperature behaviour of the specific heat may be described as C=γT+βT³ for ferromagnetic compounds and as C=γT+δ T²+βT³ for antiferromagnetic CuMnSb. The values of the density of states from the heat capacity measurements are higher than those from electronic band structure calculations. Debye temperatures are in a good agreement with those obtained from thermal expansion measurements. The Grüneisen parameter is calculated for Ni₂MnSn and CuMnSb from the magnetic contribution to the specific heat in the vicinity of T_C or T_N.