Reactions of β-substituted amines-IV: Kinetics and stereochemistry of the thermal to (r) 3-chloro-1-ethylpiperidine,and the stereo-chemical course of their reactions with nucleophiles

The rate of the thermal rearrangement of (S) 2 chloromethyl-1-ethylpyrrolidine [(S)-1a] to (R)-3-chloro-1-ethylpiperidine [(R) 2a] has been examined at three temperatures in benzene by PMR and polarimetry. The rearrangement was shown to be completely stereospecific and to obey a simple first order rate law. The calculated E_a ΔH3 and ΔS3 were 22 ± 2 $\text{kcal}\text{mole}$ (25°), 21 ± 2.5 $\text{kcal}\text{mole}$ (25°) and - 10 ± 2 e.u. (0°K) respectively. The effect of solvents having differing dielectric constants was also studied. A transition state 9'a and an ion pair intermediate 3a are suggested for the rearrangement. The stereochemical course of the reactions of (S)-1a, (R)-2a and (S)-2a with hydroxide and methoxide ions have been shown to be 100% stereospecific with an uncertainty of about 1%. The absolute configurations of all optically active reactants and products [(S)- and (R)-4a, (S)-4b (R)- and (S)-5a, (R)-5b, (S,S')-6a, (S,R')-7a and (R,R')-8a] were established by chemical correlations with known compounds or by ORD and chemical inference. The ring opening of both the primary and secondary aziridinium ion positions of 1-azonia-1-ethylbicyclo [3.1.0]hexane [(S)-3a] by nucleophiles proceeds entirely by S_N2 processes. The conversion of (R)-1-ethyl-3-hydroxypiperidine [(R)-5a] to (S)-2a. HCl with thionyl chloride in chloroform proceeds by inversion with 4.8% racemization, whereas the thermal rearrangement of (S)-1a to (R)-2a occurs with complete retention of absolute configuration.     

Synthesis of monohydridohexamethylbenzeneruthenium(II) complexes containing group V donor ligands. Isomerism arising from cyclometallation of a tertiary phosphine at aliphatic and aromatic carbon atoms

The η-hexamethylbenzenehydridoruthenium(II) complexes RuHCl(η-C₆Me₆)L (L = PPh₃ (11), AsPh₃ (12), P(C₆H₄-p-F)₃ (14), P(C₆H₄-p-Me)₃ (15), P(C₆H₄-p-OMe)₃ (16), P-t-BuPh₂ (17), P-i-PrPh₂ (18), P-i-Pr₃ (19), PCy₃ (20) and P-t-BuMe₂ (21)) have been made by heating [RuCl₂(η-C₆Me₆)]₂, the ligand and sodium carbonate in propan-2-ol. The triarylphosphine complexes 11, 14 and 15 react with methyllithium to give aryl ortho-metallated hydridoruthenium(II) complexes such as $\text{RuH(}\text{o}\text{-C}{}_6\text{H}{}_4\text{P}$Ph₂)(η-C₆Me₆) (22) and 19 similarly gives the isopropyl cyclometallated complex $\text{RuH(CH}{}_2\text{CHMeP}$-i-Pr₂(η-C₆Me₆) (29) as a mixture of diastereomers. Reaction of 17 with methyllithium gives initially the t-butyl cyclometallated complex $\text{RuH(CH}{}_2\text{CMe}{}_2\text{P}$Ph₂)(η-C₆Me₆) (25) which isomerizes by a first order process (k$\text{0}\text{?}$.2 h^?1 in C₆D₆ or THF-d₈ at 50°C) to the aryl ortho-metallated complex $\text{RuH(}\text{o}\text{-C}{}_6\text{H}{}_4\text{P}$-t-BuPh)(η-C₆Me₆) (26). The similarly generated isopropyl cyclometallated complex $\text{RuH(CH}{}_2\text{CHMeP}$Ph₂)(η-C₆Me₆) (27) has not been isolated in a pure state owing to rapid isomerization to $\text{RuH(}\text{o}\text{-C}{}_6\text{H}{}_4\text{P}$-i-PrPh)(η-C₆Me₆) (28); both 27 and 28 exist as a pair of diastereomers. The formation of the cyclometallated complexes and the isomerizations are thought to involve intermediate 16-electron ruthenium(O) complexes Ru(η-C₆Me₆)L.     

N-lines and chromium-pairs in the luminescence spectra of the spinels ZnAl2O4:Cr3+ and MgAl2O4:Cr3+

It is shown that the N-lines in the luminescence spectra of the two spinels ZnAl₂O₄:Cr³⁺ and MgAl₂O₄:Cr³⁺ exhibit quite similar dependencies on chromium concentration, excitation frequency, and thermal treatment of the samples. While most of these lines are structure dependent, the line N₄ at $\text{ν}{}_{\mathrm{R}}\text{?}\text{ν}\text{≈ 400}\text{cm}{}^{\mathrm{?1}}$ and two very weak lines are in both cases due to chromium-pairs. The exchange Hamiltonian H_ex = JS₁ · S₂ + j(S₁ · S₂)² used for the ground-state splitting is fitted by the parameters J = 40.9 cm^?1, j = 1.5 cm^?1 and J = 45.6 cm^?1, j = 2.0 cm^?1 for ZnAl-spinel and MgAl-spinel, respectively. The differences between the spectra of low-doped and high-doped samples are in both cases caused by the existence of a phonon sideband of the N₄-line, which is in many respects similar to the well-known phonon side band of the R-line.     

Intramolecular cyclization of cycloalkene carboxylic acid chlorides

Thermal cyclization of cyclooctene-4-yl-carboxylic acid chloride (5) and cycloheptene-4-yl-carboxylic acid chloride (10) yielded mixtures of mainly endo and exo 2-chlorobicyclo[3.3.1]nonane-9-one (7 and 8), and mixtures of endo and exo 2-chlorobicyclo[3.2.1]octane-8-one (12 and 13), respectively. AlCl₃-catalyzed cyclization of 10 gave the same product composition as the uncatalyzed reaction. In the AlCl₃-catalyzed cyclization of 5 considerable amounts of bicyclo[3.3.1]non-2-en-9-one (6) and exo 3-chlorobicyclo[3.3.1]nonane-9-one (9) were obtained in addition to 7 and 8.     

Synthetic routes toward pentasaccharide repeating unit corresponding to the O-antigen of Escherichia coli O181

An efficient synthetic strategy has been developed for the synthesis of the pentasaccharide repeating unit corresponding to the O-antigen of Escherichia coli O181. A one-pot, two step iterative glycosylation and [2?+?3] block glycosylation strategy have been adopted for the construction of the pentasaccharide derivative 2, which was then transformed into target compound 1 after a series of functional group transformations. Here H₂SO₄-silica has been used successfully as a promoter for all glycosylation reaction. The stereoselective outcomes of all glycosylation reactions were very good. The 2-acetamido-2,6-dideoxy-l-glucose (l-QuipNAc) building block was obtained from known carbohydrate l-rhamnose precursors.     

Crown ethers with converging neutral binding sites: Synthesis and complexation with t-butylammonium hexafluorophosphate

The influence of substituents in close proximity to crown ether cavities, on the stability of complexes of the crown ethers with t-butylammonium salts, has been investigated. Crown ethers with intra-annular donor substituents (2–4) were prepared by the reaction of 2-acetylresorcinol (1) with polyethylene glycol ditosylates and subsequent modification of the acetyl group. Crown ethers with substituents above and below the plane of the crown ether 0 atoms were synthesized by the reaction of 2,2'-dihydroxy-1,1'-biphenyls with polyethylene glycol ditosylates. Chloromethylation of 5,5'-dimethyl-1,1'-biphenyl crown ethers (6) yielded 4,4'-bis(chloromethyl)-1,1'-biphenyl crown ethers (10). 3,3'-Disubstituted-1,1'-biphenyl crown ethers (13–24) were synthesized by the reaction of 3,3'-diallyl-2,2'-dihydroxy-1,1'-biphenyl (12) with polyethylene glycol ditosylates. The allyl groups of 13 were isomerized with sodium hydride to propen- 1-yl groups. Ozonolysis of 13 and 14 gave the corresponding dialdehydes (15 and 18) which were converted into other 3,3'-disubstituted biphenyl-20-crown-6 derivatives (RCH₂COOMe, CH₂COOH, CH₂OH, CH₂Cl, CH₂OMe, OH and Me) by standard operations. The thermodynamic stability of the complexes of these functionalized crown ethers with t-butylammonium hexafluorophosphate has been studied in deuterochloroform in competition experiments with m-xyleno-18-crown-5 and benzo-15-crown-5 as the reference compounds. The nature of the 2-substituents in the crown ethers 2 and 3 has little effect on the stability of the complexes. The stability of the complexes of 3,3'-disubstituted biphenyl crown ethers depends of ringsize and the size and nature of the substituents. The most stable complexes are those of 24 (R = Me) and 14 (R=CH=CHMe).The Me groups in 24 represent the optimum between relief of O-O repulsion in the polyether ring and steric hindrance of complexation. The propen-1-yl substituents of 14 stabilize the complex because they provide extended π-electron donor stabilization. Substitution at the 4- and 4'-positions of the aryl groups has little effect on the stability of the complexes.     

Three new dibromopyrrole alkaloids from the South China Sea sponge Agelas nemoechinata

Three new dibromopyrrole alkaloids, 9-N-methylcylindradine A (1), 1-N-methylugibohlin (2), nemoechine H (3), together with one known dibromopyrrole alkaloid N-methyldibromoisophakellin (4) were isolated from the South China Sea sponge Agelas nemoechinata. Their structures were elucidated by comprehensive spectroscopic methods including HRESIMS and NMR, and the absolute configuration of compound 1 was further confirmed by comparison of optical rotation. Compound 3 exhibited moderate cytotoxic activity against K562 and L-02 with IC₅₀ values of 6.1 μM and 12.3 μM, respectively.     

Total synthesis of two isoflavone C-glycosides (6-tert-butyl puerarin and 6-tert-butyl-4′-methoxypuerarin) through the deoxybenzoin pathway

The total synthesis of two isoflavone C-glycosides (6-tert-butylpuerarin and 6-tert-butyl-4′-methoxypuerarin) was achieved through the deoxybenzoin pathway with overall yields of 14.6% and 14.2%. The key intermediate 12 was obtained by de-tert-butylation of 10 with trifluoroacetic acid and Friedel-Crafts acetylation of 2-C-β-d-glucopyranoside 11. The ring closure of 12 with the POCl₃/DMF reagent resulted glucosyl isoflavone formation 13, which was debenzylated and demethylated by BBr₃ to obtain 14 and 15. This pathway represents a novel synthetic pathway based on Friedel-Crafts acetylation and Vilsmeier-Haack cyclization to achieve isoflavone C-glycosides in high yields.     

Phenylethylene glycol-derived LpxC inhibitors with diverse Zn2+-binding groups

The Zn²⁺-dependent bacterial deacetylase LpxC is a promising target for the development of novel antibiotics. Most of the known LpxC inhibitors carry a hydroxamate moiety as Zn²⁺-binding group. However, hydroxamic acids generally exhibit poor pharmacokinetic properties. (S)-N-Hydroxy-2-{2-hydroxy-1-[4-(phenylethynyl)phenyl]ethoxy}acetamide (3) is a known phenylethylene glycol derivative potently inhibiting LpxC with a K_i of 66?nM. In vitro experiments have confirmed in silico predictions that the hydroxamate moiety of 3 is indeed metabolically labile. In this study, several strategies were explored to replace the hydroxamate moiety by other Zn²⁺-binding groups while maintaining target activity. In total, 15 phenylethylene glycol derivatives with diverse Zn²⁺-binding groups like carboxylate, hydrazide, carboxamide, sulfonamide, vicinal diol, thiol, thioester, and hydroxypyridinone moieties were prepared in divergent syntheses. However, their biological evaluation revealed that the replacement of the hydroxamate moiety of 3 by any of the investigated Zn²⁺-binding groups is detrimental for LpxC inhibitory and antibacterial activity.     

Reductive coupling of aliphatic cyclic imides and ω-amidoesters with benzophenones by low-valent titanium: Synthesis of 5-diarylmethylene-1,5-dihydropyrrol-2-ones, 6-diarylmethyl-2-pyridones,and ω-(diarylmethylene)lactams

The reductive coupling of cyclic imides and ω-amidoesters with benzophenones by Zn-TiCl₄ in THF and subsequent acid-catalyzed dehydration gave 5-diarylmethylene-1,5-dihydropyrrol-2-ones A, 6-diarylmethyl-2-pyridones B, and ω-(diarylmethylene)lactams C. In a similar manner, 3-((benzyloxy)carbonyl)amino substituted A, B, and C were synthesized from the corresponding 3-((benzyloxy)carbonyl)amino cyclic imides and ω-((benzyloxy)carbonyl)amino-ω-amidoesters prepared from L-aspartic and L-glutamic acids. In addition, 4- and 5-((benzyloxy)carbonyl)amino substituted C were also obtained by the same procedures from 2-((benzyloxy)carbonyl)amino-ω-amidoesters prepared from L-asparagine and L-glutamine, respectively.     

Bistachybotrysins D and E,one stereoisomeric pair of cytotoxic phenylspirodrimane dimers from Stachybotrys chartarum

Bistachybotrysins D and E (1 and 2), one stereoisomeric pair of phenylspirodrimane dimers, were isolated from Stachybotrys chartarum CGMCC 3.5365. They represent novel phenylspirodrimane dimers with a central [6,5,6]-tricyclic carbon scaffold containing a cyclopentanone core. The structures of 1 and 2 were elucidated through extensive spectroscopic data analysis, and their absolute configurations were characterized by calculated electronic circular dichroism (ECD). Compounds 1 and 2 displayed potent cytotoxic activity against the four human tumor cell lines HCT116, BGC823, Daoy and HepG2 with IC_ (50)values ranging from 6.7 μmol/L to 11.6 μmol/L. Furthermore, a plausible biogenetic pathway for 1 and 2 is proposed.     

Co(II), Mn(II) and Cu(II) complexes of fluoroquinolones: Synthesis, spectroscopical studies and biological evaluation against Trypanosoma cruzi

[MnCl₂(NOR)(H₂O)₂] (1), [MnCl₂(SPAR)(H₂O)₂] (2), [CoCl₂(NOR)(H₂O)₂] (3) [CoCl₂(SPAR)(H₂O)₂] (4), [CuCl₂(phen)(NOR)] (5) and [CuCl₂(phen)(SPAR)] (6) complexes with norfloxacin (NOR) and sparfloxacin (SPAR) were obtained from MnCl₂·4H₂O, CoCl₂·4H₂O and CuCl₂(phen). In all cases the NOR and SPAR coordinate in the neutral zwitterionic form. The electron paramagnetic resonance spectra of the Cu(II) complexes (5) and (6) in aqueous and DMSO solutions indicate mixture of mononuclear and binuclear complex. Complexes (1-6), together with the corresponding ligands were evaluated for their in vitro trypanocidal effect, against both bloodstream trypomastigotes and intracellular forms of Trypanosoma cruzi. SPAR and NOR were poorly effective upon T. cruzi, complexes (3) and (4) were active against intracellular forms of the parasite. The complexes (5) and (6) displayed a higher activity upon both bloodstream and intracellular forms. The potency of fluoroquinolones, specially those coordinated to Cu(II)-phen justify further trypanocidal screening assays with this compounds in vitro as well as upon experimental models of T. cruzi infection.     

Bousigonine A and B,bis- and tri-indole alkaloids from Bousigonia mekongensis and their preventing high glucose-induced podocyte injury activity

Bousigonine A (1), an unprecedented eburnamine-voaphylline type dimeric indole alkaloid, and Bousigonine B (2), the first example of eburnamine-eburnamine-aspidospermine type trimeric indole alkaloid were isolated from Bousigonia mekongensis. Their structures were elucidated mainly by spectroscopic analysis and compared to published data. Their preventing high glucose-induced podocyte injury activity were evaluated for the first time, and compound 1 exhibited significant effect with EC₅₀ value of 2.5 μM.     

On the microstructure and symmetry of apparently hexagonal BaAl2O4

The P6₃ (a=2a_p, b=2b_p, c=c_p) crystal structure reported for BaAl₂O₄ at room temperature has been carefully re-investigated by a combined transmission electron microscopy and neutron powder diffraction study. It is shown that the poor fit of this P6₃ (a=2a_p, b=2b_p, c=c_p) structure model for BaAl₂O₄ to neutron powder diffraction data is primarily due to the failure to take into account coherent scattering between different domains related by enantiomorphic twinning of the P6₃22 parent sub-structure. Fast Fourier transformation of [0 0 1] lattice images from small localized real space regions (∼10 nm in diameter) are used to show that the P6₃ (a=2a_p, b=2b_p, c=c_p) crystal structure reported for BaAl₂O₄ is not correct on the local scale. The correct local symmetry of the very small nano-domains is most likely orthorhombic or monoclinic.     

The effect of the C-methyl substitution on the molecular geometry of the silatrane skeleton: The crystal structures of 1-(4′-tolyl)-silatrane and 1-(4′-tolyl)-3,7,10-trimethylsilatrane

Unsubstituted (1) and 3,7,10-trimethyl substituted (2) 1-(4′-tolyl)-silatranes were synthesized. ¹H, ¹³C, ¹⁵N and ²⁹Si NMR spectra were recorded and assigned. The conformation of the 2 stereoisomers in solution were characterized by the NMR spectra. 1 is monoclinic, P2₁/c, with a = 13.454(2), b = 13.888(2), c = 14.345(2) Å, β = 99.10(2)°. The major stereoisomer fraction of 2 is orthorhombic, Pbca, with a = 12.168(2), b = 13.754(4), c = 20.260(3) Å. The structures were solved by direct methods and were refined by least squares to R values of 0.039 and 0.066 for 3523 and 2158 reflexions. The N→Si distances are 1: 2.169(2) (mean) and 2: 2.236(3) Å. The solid state conformation of the 2 major stereoisomer fraction is different from that in solution and this is the first example of a silatrane crystal structure where the silatrane moiety lacks C₃ symmetry.     

The nitro aromatic compounds detection by triazole carboxylic acid and its complex with the fluorescent property

The 5-methyl-1-(4-nitrophenyl)-1H-1, 2, 3-triazole-4-carboxylic acid (1) was synthesized by an improved method. By using the compound 1 as ligand, a new complex [Cu(L)₂][Cu(L)₂(H₂O)₂] (2) was prepared firstly under hydrothermal condition. Both 1 and 2 were all used as exclusive fluorescence sensor for 2, 4, 6-trinitrophenol (TNP) for the first time. The fluorescence exploration demonstrated that they exhibit highly selective and sensitive (K_SV = 393685 M^?1 and K_SV = 213269 M^?1, respectively) sensing to TNP from other nitro aromatic compounds (NACs) with high quenching efficiency QP value of 96.76% and 93.37%, as well as low detection limit (0.68 μM and 0.37 μM, respectively). It means that complex 2 had higher selectivity due to the less interference by 4-NT and 2-NP compared with 1. Moreover, the fluorescence quenching phenomenon of sensor 1 with TNP was analyzed by density functional theory (DFT).     

Ferrocenoyl peptides with sulfur-containing side chains: synthesis, solid state and solution structures

The synthesis and full characterization of a number of amino acid and dipeptide derivatives with sulfur-containing side chains derived from ferrocene carboxylic acid and ferrocene-1,1′-dicarboxylic acid is presented. In particular, compounds Fc-CO-(Aaa)_n-OMe (4) and Fe[C₅H₄-CO-(Aaa)_n-OMe]₂ (3) with (Aaa)_n = Cys(Bzl) (a), Cys(Bzl)-Cys(Bzl) (b), Cys(p-OMe-Bzl) (c), Cys(p-OMe-Bzl)-Cys(p-OMe-Bzl) (d), Met (e), and Met-Met (f) were prepared. Also, the free acid derivatives Fe[C₅H₄-CO-Met-OH]₂ (6e) and Fc-CO-Met-OH (7e) were prepared and characterized. The solid state structures of 3a, 4b, and 4e were determined by single crystal X-ray diffraction. Compound 3a shows a 1,3′ substitution pattern on the Cp rings in the solid state. Structures in solution were determined by NMR, IR and CD spectroscopy, with particular emphasis on the question of hydrogen bonding and helical chirality of the metallocene. As an example, the full assignment for the Cp signals in the disubstituted derivative 3a was achieved by simulation of the ¹H NMR signals from the cyclopentadienyl ring in combination with 2D-NOESY spectra. In solution, 3a has the known 1,2′ substitution pattern, which is stabilized by intramolecular hydrogen bonds.     

Synthesis,crystal structure and reactivity of a new pentacoordinated chiral dioxomolybdenum(VI) complex

The novel tridentate chiral ligand 2,6-bis{[(1R,2S,4R)-2-hydroxy-1,3,3-trimethyl-bicyclo[2.2.1]hept-2-yl]}pyridine (1) was readily prepared by reaction of 2,6-dilithiopyridine with (R)-(−)-fenchone. Reaction of 1 with [MoO₂(acac)₂] resulted in the formation of the new metal-oxo five-coordinated complex [MoO₂(ONO)] (2) [ONO = (1 – 2H)]. The reactivity of 2 has been studied and the derivatives [MoS₂(ONO)] (3) and [MoO(O₂)(ONO)] (4) were prepared. The compounds 1–4 have been characterised by ¹H and ¹³C{¹H} NMR, microanalysis and IR spectroscopy. Furthermore, the molecular structures of 1 and 2 have been determined by single-crystal X-ray diffraction. The behaviour of 2 as catalyst in oxotransfer and in nucleophilic substitution of propargylic alcohols reactions has been tested.     

Amidation of carboxylic acids via the mixed carbonic carboxylic anhydrides and its application to synthesis of antidepressant (1S,2R)-tranylcypromine

Primary amidations of carboxylic acids 1 or 3 with NH₄Cl in the presence of ClCO₂Et and Et₃N were developed to afford the corresponding primary amides in 22% to quantitative yields. Additionally, we have applied the amidation to the preparation of various amides containing hydroxamic acids and achieved the synthesis of (1S,2R)-tranylcypromine as an antidepressant medicine via Lossen rearrangement.     

Preparation,structures and reactivity of two new addition compounds of carbodiimides with ditungsten hexa-t-butoxide

The reactions of ditungsten hexa-t-butoxide, W₂(OCMe₃)₆, with dicyclohexylcarbodiimide, C₆H₁₁NCNC₆H₁₁, and diisopropylcarbodiimide, Me₂CHNCNCHMe₂, afford the 1:1 adducts, [W(OCMe₃)₃]₂(μ-C₆H₁₁NCNC₆H₁₁), 1, and [W(OCMe₃)₃]₂(μ-C₃H₇NCNC₃H₇), 2, respectively. These products were each shown by X-ray crystallography to be structurally homologous to the previously reported [W(OCMe₃)₃]₂(μ-CH₃C₆H₄NCNC₆H₄CH₃) and similar to [W(OCMe₃)₃(μ-C₆H₅NCO). It has been shown that the [W(OCMe₃)₃]₂(μ-RNCNR) compounds fail to react with further RNCNR, with PhNCO, PMe₃, LiOCMe₃ or LiOCHMe₂, CO or CO₂, and also that [W(OCMe₃)₃]₂(μ-PhNCO) does not afford any defined product when treated with C₆H₁₁NCNC₆H₁₁. Compounds 1 and 2 were fully characterized by IR and NMR spectroscopy and by X-ray crystallography. Compound 1 crystallizes in space group C2/c with unit cell dimensions a = 13.481(3) Å, b = 18.129(4) Å, c = 18.244(2) Å, β = 97.54(1)°, V = 4420(2) ų, Z = 4. It was refined to R = 0.0375, R_w = 0.0475. Compound 2 crystallizes in space group P2₁/c with unit cell dimensions a = 14.752(2) Å, b = 12.157(3) Å, c = 22.189(3) Å, β = 97.03(2)°, V = 3949(2) ų, Z = 4. The structure was refined to R = 0.053, R_w = 0.059. Each molecule has C₂-symmetry, with two W(OCMe₃) units united by RNCNR bridges across WW distances of 2.490(1) and 2.485(1) Å for 1 and 2, respectively.