Density-functional study for the NOx (x = 1, 2) dissociation mechanism on the Cu(1 1 1) surface

Spin-polarized density functional theory calculation is employed to study the adsorption and dissociation of NO₂ molecule on Cu(1 1 1) surface. It is shown that the most favorable adsorption structure is the NO₂ (T,T-O-,O′-nitrito) configuration which has an adsorption energy of −1.49 eV. The barriers for step-wise NO₂ dissociation reaction, NO_2(g) → N_(a) + 2O_(a), are 1.05 (for O–N–O bond activation), and 2.08 eV (for N–O bond activation), respectively, and the entire process is 0.6 eV exothermic. The energetics of single N–O dissociation with and without the presence of N atom or O atom on the surface are also calculated. The results indicate that in the presence of O atom on Cu(1 1 1) surface would raise the N–O dissociation barrier, whereas in the presence of N atom decrease it. The interaction nature between adsorbates and substrate is analyzed by the local density of states (LDOS) calculation.     

Trilinearity deviation ratio: A new metric for chemometric analysis of comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry data

Comprehensive two-dimensional gas chromatography coupled with time-of-flight mass spectrometry (GC × GC–TOFMS) is a well-established instrumental platform for complex samples. However, chemometric data analysis is often required to fully extract useful information from the data. We demonstrate that retention time shifting from one modulation to the next, Δ²t_R, is not sufficient alone to quantitatively describe the trilinearity of a single GC × GC–TOFMS run for the purpose of predicting the performance of the chemometric method parallel factor analysis (PARAFAC). We hypothesize that analyte peak width on second dimension separations, ²W_b, also impacts trilinearity, along with Δ²t_R. The term trilinearity deviation ratio, TDR, which is Δ²t_R normalized by ²W_b, is introduced as a quantitative metric to assess accuracy for PARAFAC of a GC × GC–TOFMS data cube. We explore how modulation ratio, M_R, modulation period, P_M, temperature programming rate, T_ramp, sampling phase (in-phase and out-of-phase), and signal-to-noise ratio, S/N, all play a role in PARAFAC performance in the context of TDR. Use of a P_M in the 1–2 s range provides an optimized peak capacity for the first dimension separation (500–600) for a 30 min run, with an adequate peak capacity for the second dimension separation (12–15), concurrent with an optimized two-dimensional peak capacity (6000–7500), combined with sufficiently low TDR values (0–0.05) to facilitate low quantitative errors with PARAFAC (0–0.5%). In contrast, use of a P_M in the 5 s or greater range provides a higher peak capacity on the second dimension (30–35), concurrent with a lower peak capacity on the first dimension (100–150) for a 30 min run, and a slightly reduced two-dimensional peak capacity (3000–4500), and furthermore, the data are not sufficiently trilinear for the more retained second dimension peaks in order to directly use PARAFAC with confidence.     

Critical parameters for isobutane determined by the image analysis

(p, ρ, T) Measurements and visual observations of the meniscus for isobutane were carried out carefully in the critical region over the range of temperatures: −15 mK ? (T − T_c) ? 35 mK, and of densities: −7.5 kg · m⁻³ ? (ρ − ρ_c) ? 7.5 kg · m⁻³ by a metal-bellows volumometer with an optical cell. Vapor pressures were also measured at T = (310, 405, 406, 407, and 407.5) K. The critical point of T_c and ρ_c was determined by the image analysis of the critical opalescence which is proposed in this study. The critical pressure p_c was determined to be the pressure measurement at the critical point. Comparisons of the critical parameters with values given in the literature are presented.     

A new generation of cyanide ion-selective membranes for flow injection application: part II. Comparative study of cyanide flow-injection detectors based on thin electroplated silver chalcogenide membranes

Using induced cathodic electrodeposition a number of silver chalcogenide thin layer membranes of non-trivial composition have been synthesized and their performance as ion-selective flow-injection potentiometric detectors (FIPDs) for free cyanide has been critically estimated in the context of the stringent requirements for toxic cyanide environmental monitoring. AgSCN/Ag₂S, Ag₂S, Ag_2+δSe, Ag_2+δSe_1−xTe_x (0 < δ < 0.25 and x ≈ 0.13), Ag₂Se and Ag₂Se_1−xTe_x electroplated membranes were selected for the present performance-based comparative study in order to obtain a feedback information about the effect of membrane composition. Both silver selenide and Te-doped silver selenide membranes, irrespective of their stoichiometry with respect to silver, exhibit the lowest detection limit for CN⁻ (52 ppb) with linear double-Nernstian response down to 130 ppb. The type of chalcogene anion in the membrane composition proves to exert dominant effect on the general performance characteristics of the newly developed FIPDs. The silver stoichiometry (intrinsic defects factor) and the inclusion of Te-dopant (extrinsic defects factor) have more pronounced effect on the profile of the output signal and exert moderate control on the detectors selectivity and baseline stability. This new generation of CN⁻—ion-selective membranes for FIPDs exhibits high selectivity against the common interferents present in cyanide effluents such as SCN⁻, S₂O₃²⁻, Cl⁻ and do not get poisoned in the presence of S²⁻. Moreover, their long-term stability and signal reproducibility, which make redundant the regular day-to-day calibration, coupled with the cost-effective technology for membranes preparation and easy re-generation make them attractive candidates for incorporation into automated in-field devices for in situ cyanide toxic species monitoring.     

Effect of phase behavior, density, and isothermal compressibility on the constant-volume heat capacity of ethane + n-pentane mixed fluids in different phase regions

The phase behavior, density, and constant-volume molar heat capacity (C_v,m) of ethane + n-pentane binary mixtures have been measured in the supercritical region and subcritical region at T=309.45 K. In addition, the isothermal compressibility (κ_T) has been calculated using the density data determined. For a mixed fluid with a composition close to the critical composition, C_v,m and κ_T increase sharply as the pressure approaches the critical point (CP), the dew point (DP), or the bubble point (BP). However, C_v,m is not sensitive to pressure in the entire pressure range if the composition of the mixed fluid is far from the critical composition. To tune the properties of the binary mixtures effectively by pressure, both the composition and the pressure should be close to the critical point of the mixture. The intermolecular interactions in the mixture are also discussed on the basis of the experimental results.     

Theoretical study of the thermochemistry and the kinetics of the SFxCl (x = 0-5) series

A systematic thermodynamic and kinetic study of the entire SF_xCl (x = 0-5) series has been carried out. High-level quantum chemical composite methods have been employed to derive enthalpy of formation values from calculated atomization and isodesmic energies. The resulting values for the SCl, SFCl, SF₂Cl(C₁), SF₃Cl(C_s), SF₄Cl(C_s) and SF₅Cl molecules are 28.0, −36.0, −64.2, −134.3, −158.2 and −237.1 kcal mol⁻¹. A comparison with previous experimental and theoretical values is presented. Statistical adiabatic channel model/classical trajectory, SACM/CT, calculations of selected complex-forming and recombination reactions of F and Cl atoms with radicals of the series have been performed between 200 and 500 K. The reported rate coefficients span over the normal range of about 6 × 10⁻¹² and 5 × 10⁻¹¹ cm³ molecule⁻¹ s⁻¹ expected for this type of barrierless reactions.     

Are closed clusters expected from the (n + 1) skeletal electron pairs rule in alanes and gallanes? A DFT structural study of AnHn + 2 (A = Al, Ga, and n = 4-6)

It has been suggested recently that the alanes Al_nH_n + 2 can be treated by the polyhedral skeletal electron pair theory (PSEPT) of Wade and Mingos (W-M) as it was successful for their borane congeners such as B_nH_n + 2, well known as the deprotonated B_nH_n²⁻. To do so, the neutral Al_nH_n + 2 have been considered as Al_nH_n²⁻ + 2H⁺. The additional hydrogens donate their electrons to the Al_nH_n polyhedral framework and according to the n + 1 electron pairs rule; these clusters should have closo-polyhedral structures. In this work the homologous gallanes, the structures and stabilities of Ga_nH_n + 2 are studied at high levels of calculational theory and we investigated the applicability of the W-M rule to the alanes and gallanes A_nH_n + 2 (n = 4-6; A = Al, Ga). It will be shown that the presence of bridging hydrogen atoms reduces the compactness of the corresponding polyhedron and so these species do not have the closed structures. The computations were performed at B3LYP/6-311+G(d,p), BPW91/6-311G(d,p) and B3LYP/6-311+G(3df,2p) levels of theory. Our interest in these compounds includes their potential use as hydrogen storage species and future clean sources of energy.     

Binaphthyl-based chiral macrocyclophanes with variously sized cavities: Dn-symmetrical structure constructed from unidirectionally-inclined rod segments

As new and chiral macrocyclophanes with unique structures, variously sized Pn and Mn (n=2–7=number of ‘rod’ segments) with D₂–D₇ symmetry were constructed by alternating connection of axially chiral binaphthyls and linear biphenyls via –CH₂O– moieties, so that the macrocycle consists of multiple rod-like naphthalene–biphenyl–naphthalene units linked together at the binaphthyl bonds. The dihedral angle of the two naphthalene rings of binaphthyl is restricted to around 90°, and the calculated values of strain energy difference per naphthalene–biphenyl unit in P2–P7 are almost independent of the macrocycle size, presumably owing to the flexibility of the –CH₂O– connectors.     

A pyrazole-based orthogonal ferromagnetically coupled [2 × 2] homoleptic square Cu4 grid: Magnetostructural correlations

The synthesis and structure of a pyrazole-based orthogonal ferromagnetically coupled tetracopper(II) 2 × 2 homoleptic grid complex [Cu₄(PzOAPyz)₄(ClO₄)₂](ClO₄)₂ · 6H₂O (1), formed by the reaction between the ditopic ligand PzOAPyz and Cu(ClO₄)₂ · 6H₂O, are described. The ligand contains terminal pyrazole and pyrazine residues bound to a central flexible diazine subunit (N–N) as well as one potentially bridging alkoxo group. The two adjacent metal centers are linked by an alkoxo oxygen forming essentially a square Cu₄(μ-O₄) cluster. In the Cu₄(μ-O₄) core, out of the four copper centers, two copper centers are penta-coordinated and the remaining two are hexa-coordinated. In each case of hexa-coordination, the sixth position is occupied by one of the oxygen atoms of a coordinated perchlorate ion. Complex 1 has been characterized structurally and magnetically. Although the large Cu–O–Cu bridge angles (137–138°) and short Cu–Cu distances (3.964–3.970 Å) are suitable for the transmission of the expected antiferromagnetic coupling, the square-based Cu₄(μ-O₄) cluster exhibits an intramolecular ferromagnetic exchange (J = 7.47 cm⁻¹) between the metal centers with an S = 2 magnetic ground state associated with the quasi orthogonal arrangement of the magnetic orbitals (d_x2-y2${\text{d}}_{x^2-y^2}$). The exchange pathway parameters have been evaluated from density functional calculations.     

Synthesis and characterization of metal substituted AlxCr1−x(acetylacetonate)3 single-source precursors for their application to MOCVD of thin films

A detailed study, involving the synthesis of a single-source precursor containing two metal ions sharing the same crystallographic site, has been undertaken to elucidate the use of such a single-source precursor in a CVD process for growing thin films of oxides comprising these two metals, ensuring a uniform composition and distribution of metal ions. The substituted complexes Cr_1−xAl_x(acac)₃, where acac = acetylacetonate, have been prepared by a co-synthesis method, and characterized using UV–Vis spectroscopy, TGA/DTA measurements, and single crystal X-ray diffraction at low temperature. All the studied compositions crystallize in the monoclinic space group P2₁/c with Z = 4 in the unit cell. It was observed that the ratio (Al:Cr) of the site occupancy for the metal ions, obtained from single crystal refinement, is in agreement with the results obtained from complexometric titrations. All the solid state structures have the metal in an octahedral environment forming six-membered chelate rings. M–O acac bond lengths and disorder in the terminal carbon have been studied in detail for these substituted metal–organic complexes. One composition among these was chosen to evaluate their suitability as a single-source precursor in a LPMOCVD process (low-pressure metal–organic chemical vapour deposition) for the deposition of a substituted binary metal oxide thin film. The resulting thin films were characterized by X-ray diffraction, scanning electron microscopy, and infrared spectroscopy.     

Molecular dynamics simulations of monoclinic calcium apatites: A universal equation of state

Molecular dynamics simulations of monoclinic (P2₁/b) hydroxy- and chlorapatite were undertaken in the range 498 K < T < 1298 K, and for pressures up to 7.5 GPa. The all-atom Born–Huggins–Mayer force field, that had been previously used to successfully describe the room temperature isotherms of both compounds, was also used in this work. The isothermal sets of p–V data generated by simulation were each fitted to the three-parameter form of the isothermal Parsafar and Mason equation of state (EoS) with an accuracy better than 0.07%. Taking the temperature dependence of the coefficients into account, it was found that the MD data are satisfactorily reproduced by the universal EoS. The isothermal compressibility coefficient dependence with pressure can be described by a linear relation.     

Mercury(II) complex of inverted N-methylated porphyrin: HgPh(2-NCH3NCTPP)

The reaction of PhHgOAc with 2-NCH₃NCTPPH (2) gave a mercury(II) complex of (phenylato)(2-N-methyl-5,10,15,20-tetraphenyl-21-carbaporphyrinato-N,N′,N″)-mercury(II), [HgPh(2-NCH₃NCTPP); 7]; the coordination sphere around Hg(1) in 7 was a four-coordinate derivative with a seesaw geometry and dipole–dipole (DD) interaction governed the longitudinal relaxation rate for Hg(1)–Ph–H_2,6 protons of 7 in CDCl₃ (0.01 M) at 599.95 MHz.     

Highly selective acetoxylation of sulfonamides via using phenyliodine(III) diacetate

A highly efficient acetoxylation reaction of N-aryl-arylsulfonamides has been developed, presumably proceeding via the selective functionalization of N-aryl C–H bonds. A stoichiometric amount of PhI(OAc)₂ was generally employed as the oxidation reagent, and various para-acetoxylated sulfonamide derivatives had been generated in excellent yields. This chemistry endowed an economic synthesis of valuable acetoxylated sulfonamides through direct C–O bond formation processes.     

Synthesis,spectral characterization of the zinc(II) mixed-ligand complexes of N(4)-allyl thiosemicarbazones and N,N,N′,N′-tetramethylethylenediamine,and crystal structure of the novel [ZnL2(tmen)] compound

Mixed-ligand zinc complexes with N,N,N′,N′-tetramethylethylenediamine (tmen) and R-salicylaldehyde N(4)-allyl thiosemicarbazones (R: 3-OCH₃ (L₁), 5-Br(L₂)), [ZnL_1,2(tmen)], were synthesized and the complexes were characterized by elemental analysis, atomic absorption spectrometer, magnetic susceptibility, molar conductivity, electrospray ionization (ESI) and atmospheric pressure chemical ionization (APCI) mass spectra and IR, UV–Vis, ¹H NMR and ¹⁵N spectroscopies. Crystal of [ZnL₂(tmen)] have a slightly distorted square pyramid involving O, N, S atoms of thiosemicarbazone and one N atom of tmen in basal plane and the other N atom of tmen in apex of the pyramid. The non-coordinated allyl group is disordered.     

Computational study of keto–enol equilibria of tropolone in gas and aqueous solution phase

Density functional theory calculations employing the B3LYP exchange-correlation functional, as well as Hartree–Fock computations, were performed on 2-hydroxy-2,4,6-cycloheptatrien-1-one (tropolone) and 3,5- and 3,6-cycloheptadiene-1,2-dione in gas and aqueous solution phases in order to determine the equilibrium constant for keto to enol interconversion of the isomers of C₇H₆O₂. Two standard basis sets were used throughout, namely 6-311++G^∗∗ and aug-cc-pVDZ. Solvent effects were modelled using two different self-consistent reaction field approaches – the Onsager dipole and the polarizable continuum models (PCM). In addition, the G3 method was used for calculations on species in the gas phase. Molecular geometries were fully optimized at each model chemistry, and it was found that the two keto isomers are always higher in energy than the enol form. From the results of B3LYP/6-311++G^∗∗ calculations of the difference in Gibbs free energy in the gas phase and using PCM, the relative pK values for the 2-hydroxy-2,4,6-cycloheptatrien-1-one ? 3,5- and 3,6-cycloheptadiene-1,2-dione system are 13.75 (g), 15.78 (g) and 13.05 (aq) and 13.45 (aq), respectively. That equilibrium is tilted almost exclusively in the direction of tropolone is due to resonance stabilization of the enol as a result of aromaticity, and is most easily understood on the basis of elementary Hückel theory.     

Lipophilicity data for some preservatives estimated by reversed-phase liquid chromatography and different computation methods

The chromatographic behavior of some preservatives was performed by reversed-phase high-performance liquid chromatography on C18 (LiChroCART, Purosphere RP-18e), C8 (Zorbax, Eclipse XDB-C8), CN100 (Säulentechnik, Lichrosphere) and NH₂ (Supelcosil LC-NH₂) columns. The lipophilicity estimated for the first time on the first three columns are comparable and very well correlated. The mobile phase was a mixture of methanol–water (0.1% formic acid) in different volume proportions from 40% to 60% (v/v) for RP-C18, RP-C8 and RP-CN100 column (exception for parabens on RP-C8 column—the methanol concentrations being from 55% to 65%) and from 30% to 50% (v/v) for RP-NH₂. Highly significant correlations were obtained between different experimental indices of lipophilicity (log k_w, S, φ₀, mean of k and log k, and scores of k and log k corresponding to the first principal component) and computed log P values, and C8 column seems to be more suited for estimating the lipophilicity of the investigated compounds. These direct correlations offer a very good opportunity to derive powerful predictive models via Collander-type equations. The reliability of scores values as lipophilic indices is shown by their high correlation with the log K_ow obtained using classical “shake-flask” technique, log k_w and also some of the computed log P values. In addition, the results obtained applying PCA to the retention data may be used in interpreting the molecular mechanism of interactions between eluents and stationary phases with different polarity and to explain the chromatographic behavior of compounds. Finally, the “congeneric lipophilicity chart” described by the scores corresponding to the first principal component has the effect of separating compounds from each other more effectively from congeneric ((dis)similarity) point of view. The parabens and tert-butylhydroquinone appeared to be the most lipophilic preservatives.     

Isolation of secondary metabolites from Hortia oreadica (Rutaceae) leaves through high-speed counter-current chromatography

High-speed counter-current chromatography (HSCCC) with a two-phase solvent system (hexane–ethanol–acetonitrile–water 10:8:1:1, v/v) was applied to examine the leaves of Hortia oreadica, which afforded the known limonoid guyanin (1), the alkaloids rutaecarpin (2) and dictamnine (6), the dihydrocinnamic acid derivatives methyl 5,7-dimethoxy-2,2-dimethyl-2H-1-benzopyran-6-propanoate (3), 5,8-dimethoxy-2,2-dimethyl-2H-1-benzopyran-6-propanoic acid (4), together with the new E-3,4-dimethoxy-α(3-hydroxy-4-carbomethoxyphenyl)cinnamic acid (5). The recovery of compounds 1–6 was determined by comparison with LC-atmospheric pressure chemical ionization MS/MS data: 66.2%, 93.1%, 102.5%, 101.2%, 99.0% and 84.9%, respectively. Compound 3 showed IC₅₀ of 23.6 μM against Plasmodium falciparum and 15.6 μM against Trypanosoma brucei rhodesienses and was not toxic to KB cells (IC₅₀ > 100 μM).