Hydroxylation of sesquiterpenes by enzymes from chicory (Cichorium intybus L.) roots

A microsomal enzyme preparation of chicory roots catalyses the hydroxylation of various sesquiterpene olefins in the presence of NADPH. Most of these hydroxylations take place at an isopropenyl or isopropylidene group. The number of products obtained from any of the substrates is confined to one or, in a few cases, two sesquiterpene alcohols. In addition, the conversion of (+)-valencene into nootkatone through β-nootkatol was observed. The involvement of (+)-germacrene A hydroxylase (a cytochrome P450 enzyme) and other enzymes of sesquiterpene lactone biosynthesis in these reactions is discussed.     

Identification and synthesis of volatiles released by the myxobacterium Chondromyces crocatus

Cultures of the myxobacterium Chondromyces crocatus on agar plates were analysed by closed-loop-stripping analysis or solid phase micro extraction. The odour profiles consist mainly of pyrazines, sesquiterpenoids and some aromatic compounds, summing up to more than 50 components. Several new pyrazines as 2-(1-hydroxy-1-methylethyl)-3-methoxypyrazine (9), 2-(1-hydroxy-1-methylpropyl)-3-methoxypyrazine (10), and 2-(1-hydroxy-2-methylpropyl)-3-methoxypyrazine (11) were identified besides several known pyrazines. A major pyrazine occurring in most samples was 2,5-bis-(1-methylethyl)pyrazine (3). While the well known sesquiterpenoid geosmin (1) was present in low amounts, the related compound (1(10)E,5E)-germacradien-11-ol (21) was identified in most samples in larger quantities. Other prominent sesquiterpenoids not reported before from microorganisms were (6S,10S)-6,10-dimethylbicyclo[4.4.0]dec-1-en-3-one (16), which was accompanied by smaller amounts of several derivatives. The biosynthesis of these compounds is discussed in relation to the recently proposed biosynthetic pathways to 1 and 21.     

Effect of the aging on lees and other alternative techniques on the low molecular weight phenols of Tempranillo red wine aged in oak barrels

The effect of different alternative techniques to the traditional aging on lees on the low molecular weight phenolic compounds of red wines was study as well as their evolution during the aging in oak wood barrels for six months. The study was carried out with Tempranillo red grapes from two consecutive vintages. The techniques assayed were the traditional aging on lees with or without the addition of exogenous β-glucanase enzymes, the use of yeast derivative preparations also with or without the addition of exogenous β-glucanase enzymes, the micro-oxygenation applied together with the aging on lees, and the use of non-toasted oak wood chips.     

Quantification of the push-pull effect in substituted alkenes

The quotient of the occupation numbers of π bonding and π* antibonding orbitals of the central CC partial double bond, , proved to be a useful parameter to quantify the push-pull effect completely for the first time in substituted alkenes by examination of a comprehensive set of compounds.     

Evaluation of antioxidant activity of the polysaccharides extracted from Lycium barbarum fruits in vitro

Polysaccharides, one of the most important functional constituent in Lycium barbarum fruits, a famous Chinese medicinal herb, are isolated with boiling water decoction. Analysis shows that its carbohydrate content is up to 97.54% mainly composed of d-rhamnose, d-xylose, d-arabinose, d-fucose, d-glucose, and d-galactosc. In the present study, the antioxidant activity of the polysaccharides extracted from L. barbarum fruits was evaluated by six established in vitro methods, namely superoxide radical () scavenging activity, reducing power, β-carotene-linoleate model, inhibition of mice erythrocyte hemolysis mediated by peroxyl free radicals, 1,1-diphenyl-2 picrylhydrazyl (DPPH⁻) radical-scavenging and metal chelating activity. The polysaccharides showed notable inhibitory activity in the β-carotene-linoleate model system in a concentration-dependent manner. Furthermore, it exhibited a moderate concentration-dependent inhibition of the DPPH⁻ radical. The multiple antioxidant activity of the polysaccharides was evident as it showed significant reducing power, superoxide scavenging ability, inhibition of mice erythrocyte hemolysis mediated by peroxyl free radicals and also ferrous ion chelating potency. The data obtained in the in vitro models clearly establish the antioxidant potency of the polysaccharides extracted from L. barbarum fruits.     

Fourier transform infrared imaging and microscopy studies of Pinus radiata pulps regarding the simultaneous saccharification and fermentation process

The distribution and chemical patterns of lignocellulosic components at microscopic scale and their effect on the simultaneous saccharification and fermentation process (SSF) in the production of bioethanol from Pinus radiata pulps were analyzed by the application of diverse microscopical techniques, including scanning electronic microscopy (SEM), confocal laser scanning microscopy (CLSM) and attenuated total reflectance (ATR) – Fourier transform infrared microspectroscopy. This last technique was accompanied with multivariate methods, including principal component analysis (PCA) and multivariate curve resolution with alternating least squares (MCR-ALS) to evaluate the distribution patterns and to generate pure spectra of the lignocellulosic components of fibers. The results indicate that the information obtained by the techniques is complementary (ultrastructure, confocality and chemical characterization) and that the distribution of components affects the SSF yield, identifying lignin coalescence droplets as a characteristic factor to increase the SSF yield. Therefore, multivariate analysis of the infrared spectra enabled the in situ identification of the cellulose, lignin and lignin-carbohydrates arrangements. These techniques could be used to investigate the lignocellulosic components distribution and consequently their recalcitrance in many applications where minimal sample manipulation and microscale chemical information is required.     

Enhanced production of poly(vinyl alcohol)-degrading enzymes by mixed microbial culture using 1,4-butanediol and designed fermentation strategies

Nowadays, poly(vinyl alcohol) (PVA) has caused serious pollution in the natural environment. To eliminate PVA pollution, PVA-degrading enzymes (PVADE) were studied. Previously our group has detected PVADE in a mixed microbial culture. In this study, it was found that 1,4-butanediol could enhance PVADE production. High PVADE activity (3.43 U ml⁻¹), which was 4.6 folds of the control (0.75 U ml⁻¹), was achieved with 1,4-butanediol as carbon source. Concomitantly, the average PVA-degrading rate improved 2.0 folds compared to the control. Specifically, diauxic growth coupled with increased PVA-degrading rate was observed. Based on this phenomenon, two-stage fermentation by adding another carbon source at a proper time was designed. By applying this strategy, high PVADE productivity (60.8 U l⁻¹ h⁻¹) was achieved. Further, the two-stage fermentation was extended to three-stage fermentation by adding PVA to improve PVADE production. The PVADE activity per unit biomass (Y_PVADE/x) was significantly enhanced over two-stage fermentation and the maximum increment was 418 U g⁻¹.     

Quantification of isoorientin and total flavonoids in Passiflora edulis fruit pulp by HPLC-UV/DAD

A method is reported for the quantification of isoorientin (using a standard addition method) and total flavonoids (expressed as rutin, using the external standard method) in passion fruit pulp (Passiflora edulis Sims f. flavicarpa Degener, Passifloraceae). Extraction of flavonoids was optimized by experimental design methodology, and quantitative analysis was performed by high-performance liquid chromatography with photo-diode array detection (HPLC-UV/DAD). The method was developed and validated according to ICH requirements for specificity, linearity, accuracy, precision (repeatability and intermediate precision), LOD and LOQ. Rutin was chosen as standard for the quantification of total flavonoids in order to propose a HPLC method feasible for routine analysis of the flavonoids in the passion fruit pulp. The passion fruit pulp contained 16.226 ± 0.050 mg L^− 1 of isoorientin and 158.037 ± 0.602 mg L^− 1 of total flavonoid, suggesting that P. edulis fruits may be comparable with other flavonoid food sources such as orange juice or sugarcane juice.     

Fingerprint quality control of Angelica sinensis (Oliv.) Diels by high-performance liquid chromatography coupled with discriminant analysis

High-performance liquid chromatography (HPLC) was employed in the fingerprint analysis of Angelica sinensis (Oliv.) Diels. A chromatographic profile of A. sinensis (Oliv.) Diels from the Dingxi District of Gansu province, China, was established as the characteristic fingerprint. The feasibility and advantages of employing chromatographic fingerprint combined with discriminant analysis were investigated and demonstrated for the evaluation of A. sinensis (Oliv.) Diels for the first time. Our results showed that the chromatographic fingerprint combining with discriminant analysis can efficiently distinguish A. sinensis (Oliv.) Diels from various areas.     

Classification of commercial wines from the Canary Islands (Spain) by chemometric techniques using metallic contents

Eleven elements, K, Na, Ca, Mg, Fe, Cu, Zn, Mn, Sr, Li and Rb, were determined in dry and sweet wines bearing the denominations of origin of El Hierro, La Palma and Lanzarote islands (Canary Islands, Spain). Analyses were performed by flame atomic absorption spectrophotometry, with the exceptions of lithium and rubidium for which flame atomic emission spectrophotometry was used. Sweet wines from La Palma were elaborated as naturally sweet with over-ripe grapes and significant differences were found in all the analysed elements with the exceptions of sodium, iron and rubidium with regard to dry wines from the same island. Contrarily, sweet wines from Lanzarote elaborated with grapes in a similar ripening state to dry wines did not present significant differences between them with the exception of strontium, the content of which was greater in dry wines. Among the three islands, significant differences in mean content were found with the exceptions of iron and copper. Cluster analysis and principal component analysis show differences in wines according to the island of origin and the ripening state of the grapes. Linear discriminant analysis using rubidium, sodium, manganese and strontium, the four most discriminant elements, gave 100% recognition ability and 95.6% prediction ability. The sensitivity and specificity obtained using soft independent modelling of class analogy (SIMCA) as a modelling multivariate technique were both 100% for El Hierro and Lanzarote, and 100 and 95%, respectively, for La Palma. The modelling and discriminant capacities of the different metals were also studied.     

(6Z,9Z,12Z)-6,9,12-Octadecatriene and (3Z,6Z,9Z,12Z)-3,6,9,12-icosatetraene, the novel sex pheromones produced by emerald moths

(6Z,9Z,12Z)-6,9,12-Octadecatriene and (3Z,6Z,9Z,12Z)-3,6,9,12-icosatetraene, hydrocarbons unsaturated more highly than usual lepidopteran Type II pheromones, were identified from geometrid females of Hemithea tritonaria and Thalassodes immissaria intaminata, respectively. The triene was synthesized by a double Wittig reaction between hexanal and an ylide derived from (Z)-1,6-diiodo-3-hexene, and the tetraene was synthesized by a coupling between (Z)-3-undecenal and an ylide derived from (3Z,6Z)-1-iodo-3,6-nonadiene. Each synthetic compound attracted males of the corresponding emerald moths in a field.     

Microsensor in vivo monitoring of oxidative burst in oilseed rape (Brassica napus L.) leaves infected by Sclerotinia sclerotiorum

Oxidative burst is the rapid and transient production of large amounts of reactive oxygen species, including superoxide anion, hydrogen peroxide (H₂O₂), and hydroxyl radical. A rapid and simple technique was employed for in vivo detection of oxidative burst in oilseed rape (Brassica napus L.) leaves, using a modified electrode. Platinum (Pt) micro-particles were dispersed on a Pt electrode, coated with a poly (o-phenylenediamine) film. This exhibited high sensitivity, selectivity and stability in H₂O₂ detection. Amperometry was used to obtain satisfactory linear relationships between reductive current intensities and H₂O₂ concentrations at −0.1 V potential in different electrolytes. This electrode was used in vivo to detect oxidative burst in oilseed rape following fungal infection. Oxidative bursts induced by infection of the fungal pathogen Sclerotinia sclerotiorum (Lib.) de Bary exhibited notably different mechanisms between a susceptible and a resistant glucose oxidase-transgenic genotype.     

On the nature of oxoiron (IV) intermediate in dioxygen activation by non-heme enzymes

We discuss electronic properties of the molecular systems with the short distance Fe–O unit, which are presumably formed as reaction intermediates during oxygen activation by non-heme enzymes. By performing an analysis of electronic densities in terms of multiconfigurational expansions of wavefunctions with localized orbitals the electronic properties of the Fe–O moiety in two model complexes are compared. The first one refers to the enzymatic intermediate, and the second biomimetic complex models a synthetic compound [Fe(O)(TMC)(NCCH₃)](OTf)₂ with a terminal Fe–O unit, which is experimentally characterized as the Fe(IV)=O species. We show that the orbital pictures of the FeO unit in both model complexes share common features. According to these simulations, the non-heme enzymatic intermediates may be assigned to the systems with the oxidation state of Fe between III and IV, as recently proposed for the TauD enzyme in experimental spectroscopic studies.     

Chemical constituents of the lichen Usnea baileyi (Stirt.) Zahlbr

Investigation of the chemical constituents of the lichen Usnea baileyi (Stirt.) Zahlbr led to the isolation of a new dimeric xanthone, bailexanthone (1), and a novel depsidone, bailesidone (2), along with twenty-five known metabolites (3–27). Their structures were established by means of extensive spectroscopic analysis and comparison with data reported in the literatures. Compound 1 derives from secalonic acid scaffold with C-8/8′ reduction and compound 2 represents the first example of menegazziaic acid derivative with an unprecedented B-ring moiety. Two new compounds 1–2 were evaluated for their cytotoxic activities against A549 (human lung carcinoma) and HT29 (human colorectal adenocarcinoma) cell lines. All of them showed weak or no activity against two cell lines.     

On-line simultaneous monitoring of glucose and acetate with FIA during high cell density fermentation of recombinant E. coli

A two-channel flow injection analysis (FIA) system was developed for the simultaneous on-line monitoring of acetate and glucose during high cell density fed-batch fermentations of recombinant Escherichia coli. Acetate measurement was performed with a modified and optimised version of an existing method, based on acetate diffusion through a gas-diffusion chamber into a stream containing an acid-base indicator. The subsequent decrease in the absorbance was detected with an incorporated photometer. After method optimisation, it was possible to achieve linearity until 10 g/kg with no dilution step and with a detection level of 0.05 g/kg. Although some interferences were found, the performance of the method proved to be sufficiently reliable for on-line control purposes Commercially packed glucose oxidase (GOD) was used for the amperometric measurement of glucose. The method was linear up to 5 g/kg and it was possible to detect concentrations lower than 0.06 g/kg. For these measurements, no significant interferences were detected when the results were compared with other reference methods. The application of a simultaneous parallel configuration of the methods to a high cell density fed-batch E. coli fermentation was tested and reliable results were obtained within a 3 min delay. This information was made available to a supervisory computer running a developed LabVIEW™ programme via an Ethernet network, allowing the immediate implementation of control actions, improving the process performance.     

Effect of the oxidation level on the thermogravimetric kinetics of an oxidized galactoxyloglucan from Hymenaea courbaril (Jatobá) seeds

A natural hydrocolloid extracted from Hymenaea courbaril seeds contains Glc:Xyl:Gal:Ara in a molar ratio of 51:27:21:1. Selective TEMPO radical oxidation (2,2,6,6-tetramethylpiperidine-1-oxyl) at C-6 of the polysaccharide gave products with 3.0, 5.1 and 9.5% of carboxyl groups as determined colorimetrically. Molecular mass analyses showed a decrease in the M_w of the oxidized galactoxyloglucans and an increase in angular fit from the RMS ratio versus molar mass plot. This indicated that the oxidation process generated a more rigid structure, going from a random coil in the native polymer to a rod conformation in the oxidized samples, probably due to the polyanionic structure. Thermogravimetric kinetics of degradation was obtained using the Arrhenius equation and an increase in the degradation rate, was apparently directly dependent on the oxidation level.     

Charge equilibria and pK values of 5-carboxypyranomalvidin-3-glucoside (vitisin A) by electrophoresis and absorption spectroscopy

Apparent pK values of the wine pigment, 5-carboxypyranomalvidin-3-glucoside (vitisin A), were determined using UV-vis spectroscopy, viz. pK_a1=0.98 (±0.10), pK_H1=4.51 (±0.03) and pK_H2=7.57 (±0.02). An additional ionisation constant at high pH (pK_a4=8.84±0.06) was established by high-voltage paper electrophoresis. These data in conjunction with previously published pK_a values determined by high-voltage electrophoresis suggest that in wine (pH 3.2-3.8), 5-carboxypyranomalvidin-3-glucoside exists as a complex mixture of hydrated and non-hydrated, partially ionised species with the predominant species being the quinonoidal base (λ_max 498 nm).     

Identification of the biosynthetic units of Cypridina luciferin in Cypridina (Vargula) hilgendorfii by LC/ESI-TOF-MS

In a luminous ostracod Cypridina (Vargula) hilgendorfii, Cypridina luciferin with an imidazopyrazinone structure (3,7-dihydroimidazopyrazin-3-one) is utilized for the luminescence reaction. To identify the biosynthetic units of Cypridina luciferin, the stable isotope labeled compounds were examined by feeding experiments with living Cypridina specimens. The incorporation of the labeled compounds into Cypridina luciferin was identified by the method of LC/ESI-TOF-MS analyses and these results suggested that l-tryptophan, l-arginine and l-isoleucine are structural units of Cypridina luciferin.     

Structure evolution mechanism of poly(acrylonitrile/itaconic acid/acrylamide) during thermal oxidative stabilization process

Polyacrylonitrile (PAN) polymers with different compositions were prepared by an efficient aqueous free-radical polymerization technique.Thermal properties of polyacrylonitrile homopolymer (PAN),poly(acrylonitrile/itaconic acid) [P(AN/IA)] and poly(acrylonitrile/itaconic acid/acrylamide) [P(AN/IA/AM)] were studied by Fourier transform infrared spectroscopy,X-ray diffraction,differential scanning calorimetry and thermogravimetry in detail.It was found that AM had the ability to initiate and accelerate thermal oxidative stabilization process,which was confirmed by the lower initiation temperature and broader exothermic peak in P(AN/IA/AM) as compared with that in P(AN/IA) and PAN.The intensity of heat releasing during the thermal treatment was relaxed due to the presence of two separated exothermic peaks.Accompanied by DSC analysis and calculation of the apparent activation energy of cyclization reaction,two peaks were assigned to the ionic and free radical induction mechanisms,respectively.The higher rate constant in P(AN/IA/AM) indicated that the ionic mechanism actually had a kinetic advantage at promoting thermal stability over the free radical mechanism.This study clearly show that the synthesized P(AN/IA/AM) terpolymers possess larger room to adjust manufacture parameters to fabricate high performance of PAN-based carbon fibers.     

Towards the Pharmacological Validation and Phytochemical Profiling of the Decoction and Maceration of Bruguiera gymnorhiza (L.) Lam.—A Traditionally Used Medicinal Halophyte

Decoctions (leaves and roots) of Bruguiera gymnorhiza (L.) Lam. are traditionally used against diabetes in many countries, including Mauritius. This study endeavoured to evaluate the inhibitory potential of leaves, roots, twigs and fruits extracts (decoction and maceration) of B. gymnorhiza against key enzymes relevant to diabetes. Considering complications related to diabetes, other clinical enzymes, namely, acetylcholinesterase (AChE), butyrylcholinesterase (BChE), tyrosinase, elastase and pancreatic lipase, were used. Identification of compounds was carried out using ultra-high-performance liquid chromatography/electrospray ionization tandem mass spectrometry (UHPLC-ESI-MS/MS). Antioxidant capacities were assessed using DPPH, ABTS, FRAP, CUPRAC, phosphomolybdenum, metal chelating. The relationship between mode of extraction, plant parts and biological activities was determined using multivariate analysis. Macerated fruits, rich in phytochemicals (phenolic, flavanol, tannin, and triterpenoid), exhibited substantially high antioxidant capacities related to radical scavenging (DPPH: 547.75 ± 10.99 and ABTS: 439.59 ± 19.13 mg TE/g, respectively) and reducing potential (CUPRAC: 956.04 ± 11.90 and FRAP: 577.26 ± 4.55 mg TE/g, respectively). Additionally, the same extract significantly depressed AChE and BChE (3.75 ± 0.03 and 2.19 ± 0.13 mg GALAE/g, respectively), tyrosinase (147.01 ± 0.78 mg KAE/g), elastase (3.14 ± 0.08 mg OE/g) and amylase (1.22 ± 0.01 mmol ACAE/g) enzymatic activities. Phytochemical results confirmed the presence of 119 compounds in all maceration and 163 compounds in all decoction samples. The screening also revealed important compounds in the extracts, namely, quinic acid, brugierol, bruguierol A, epigallocatechin, chlorogenic acid, to name a few. Multivariate analysis reported that the plant parts of B. gymnorhiza greatly influenced the observed biological activities in contrast to the types of extraction methods employed. Docking calculations have supported the findings of the experimental part through the high binding affinity and strong interactions of some compounds against tyrosinase, AChE, BChE and elastase enzymes. The decocted root and leaf of B. gymnorhiza showed low to moderate antidiabetic activity, thereby partially supporting its traditional uses in the management of diabetes. However, the fruit, the most active organ, can be used as a diet supplement to reduce the risk of diabetes complications after evaluating its cytotoxic effects.