A convenient approach to the synthesis of 2-(2-aminoethyl)pyrroles and their heterocyclization into hydrogenated pyrrolopyridines and related pyrroloindolizines

2-(2-Aminoethyl)pyrroles and 2-(2-succinimidoethyl)pyrroles were prepared from acetals of ethyl 4-oxoalkanoates via latent vinyl 1,4-dicarbonyl compounds as the key intermediates. The Pictet-Spengler condensation of 2-(2-aminoethyl)pyrroles with aromatic aldehydes gave 4,5,6,7-tetrahydro-1H-pyrrolo[3,2-c]pyridines in good yields. 4,5,7,8,9,9a-Hexahydro-3H-pyrrolo[2,3-g]indolizines were prepared in a similar way starting from 2-(2-succinimidoethyl)pyrroles.     

Synthesis of Octasubstituted Porphyrins

The synthesis of porphyrins having high solubility in organic solvents requires the presence of long chain aliphatic substituents. Such substituted porphyrins are readily prepared in good yields by extension of our general procedure¹ which involves the synthesis of α,β-unsaturated ketones, conversion of these to 3,4-disubstituted pyrroles followed by acid catalyzed condensations of these pyrroles with formaldehyde in the presence of air.     

Synthesis and Characterization of Six New Carbazolyl Porphyrins

Novel 4-(N-carbazole methyl) benzoic acid and N-carbazolacetic acid are synthesized, then six new carbazolyl porphyrins are synthesized by bonding these acids to hydroxy porphyrin or amido porphyrin via acyl chloride or N,N′-dicyclohexylcarbodiimide (DCC)–dimethylaminopyndine methods. The formations of these title compounds, as well as their intermediates are characterized by ¹H NMR, mass spectrometry, Fourier transform–infrared, and elemental analysis.     

Electrostatic interaction between cationic calix[4]pyrroles and anionic porphyrins in water

The formation and characterization of molecular assemblies resulting from mixing of solutions of tetracationic calix[4]pyrroles and tetraanionic porphyrins in water are reported. The self-assembly of the complementary building blocks was quantitatively studied by UV–vis, ¹H NMR, Fluorescence and ESI–MS. Binding constants calculated by absorption spectroscopic titrations were in the range of 10³–10⁵ M^?1. The results indicate that the cationic thiacalix[4]pyrroles show greater binding affinity towards metal free porphyrins than metalloporphyrins under neutral conditions.     

Nitrogen NMR spectroscopy: Application to some substituted pyrroles

A series of ¹⁵N labeled 2-acylpyrroles was prepared and the nitrogen and proton n.m.r. spectra obtained. ¹⁵N chemical shifts for these compounds are reported for the first time. No correlation between the nitrogen chemical shift and any Hammett substituent constant could be found. No variation in J(¹⁵N? H) was observed for any compound with changes in solvent, temperature or concentration, ruling out any observable tautomeric equilibria for these systems. An increase in J(¹⁵N? H) with the addition of electron withdrawing groups indicates increasing polarization of the N? H bond and acidity of these molecules. Two and three bond ¹⁵N couplings are also reported.     

Fluorinated photosensitizers: synthesis, photophysical, electrochemical, intracellular localization, in vitro photosensitizing efficacy and determination of tumor-uptake by F in vivo NMR spectroscopy

For in vivo NMR studies, starting from pyrroles, a series of fluorinated porphyrins were synthesized by following the MacDonald reaction conditions. Upon reaction with osmium tetroxide, a fluorinated porphyrin containing four trifluoromethyl groups (12 fluorine units) was converted into the related chlorin and bacteriochlorin which exhibited long-wavelength absorptions at 652 and 720 nm, respectively. All compounds produced good singlet oxygen production efficiency. A comparative study of nine porphyrins with and without fluorine substituents indicated no adverse effects of the presence of fluorinated groups in the photophysical properties of the porphyrins, chlorins or bacteriochlorins. The first and second one-electron reduction potentials (vs SCE) of the investigated compounds range between −1.29 and −1.49 V and between −1.66 and −1.84 V in PhCN containing 0.1 M TBAP. UV-visible spectroelectrochemical data suggested the formation of π-anion and π-cation radicals upon the first reduction and first oxidation. The in vivo ¹⁹F MR study of a representative fluorine labeled compound with twelve equivalent fluorines confirmed the presence of the fluorine labeled sensitizer in mouse (C3H/HeJ) implanted with RIF tumors on mouse foot dorsum by inoculating 2×10⁵ cells (the studies were repeated on four tumored mice to confirm the feasibility and reproducibility). All fluorinated compounds were found to be quite effective in vitro. In a comparative intracellular localization study with Rhodamine-123 in RIF tumor cells, the most soluble porphyrin containing two propionic ester side chains was found to localize in mitochondria as well as the related chlorin and bacteriochlorin.     

Studies of peptide a- and b-type fragment ions using stable isotope labeling and integrated ion mobility/tandem mass spectrometry

The structures of peptide a- and b-type fragment ions were studied using synthetic peptides including a set of isomeric peptides, differing in the sequence location of an alanine residue labeled with ¹⁵N and uniformly with ¹³C. The pattern of isotope labeling of second-generation fragment ions derived via a _n and b _n ions (where n=4 or 5) suggested that these intermediates existed in part as macrocyclic structures, where alternative sites of ring opening gave rise to different linear forms whose simple cleavage might give rise to the observed final products. Similar conclusions were derived from combined ion mobility/tandem MS analyses where different fragmentation patterns were observed for isomeric a- or b-type ions that display different ion mobilities. These analyses were facilitated by a new approach to the processing of ion mobility/tandem MS data, from which distinct and separate product ion spectra are derived from ions that are incompletely separated by ion mobility. Finally, an example is provided of evidence for a macrocyclic structure for b _n ions where n=8 or 9.     

Porphyrins with exocyclic rings. Part 20: Synthesis and spectroscopic characterization of porphyrins with fused 2,1,3-benzoxadiazole and 2,1,3-benzoselenadiazole moieties

Porphyrins with fused 2,1,3-benzoxadiazole and 2,1,3-benzoselenadiazole units were prepared by the ‘3+1’ MacDonald-type methodology. 4-Nitro-2,1,3-benzoxadiazole, 6-chloro-4-nitro-2,1,3-benzoxadiazole and 4-nitro-2,1,3-benzoselenadiazole condensed with isocyanoacetates in the presence of the non-nucleophilic base DBU to give tricyclic pyrrole derivatives in excellent yields. Further cleavage of the ester moieties and decarboxylation afforded α-unsubstituted pyrroles and these were further condensed with 2 equiv of an acetoxymethylpyrrole tert-butyl ester to give crude preparations of tripyrranes. The tert-butyl ester protective groups were cleaved with TFA and following dilution with dichloromethane, ‘3+1’ condensation with a pyrrole dialdehyde, and oxidation with ferric chloride, the heterocyclic ring fused porphyrins were obtained in moderate yields. The yields were lower than expected because of difficulties in preparing required tripyrranes due to the reduced reactivity of the pyrrolic intermediates. The UV-vis spectra of these new porphyrin systems were highly modified showing broadened split Soret bands. In addition, the nickel(II), copper(II) and zinc complexes gave unusual UV-vis spectra with weakened split Soret bands and strong Q-type absorptions above 600 nm. These modified structures show some potential for applications as photosensitizers in photodynamic therapy.     

Structure and dynamics of silk fibroin studied with 13C, 15N and 2H solid state NMR

[1-¹³C]Gly, L-[1-¹³C]Ala, [¹⁵N]Gly, L-[¹⁵N]Ala, [2,2-²H₂]Gly, L-[3,3-²H₂]Ser and [3,3,3-²H₃]Ala labeled silk fibroin fibers from Bombyx mori and Samia cynthia ricini silkworms were prepared in order to analyze structure of backbone and dynamics of side chain. The torsion angles ϕ and Ψ were determined from the angular dependent ¹³C and ¹⁵N solid state NMR spectra for uniaxially oriented fiber samples. In addition, the characteristic side chain dynamics of Ser residue determined from solid state ²H NMR measurements was compared with those of Ala and Gly residues.     

1H and 13C NMR spectra of N-vinylpyrroles

The position of the substituants in 2, 3-dialkyl-1-vinylpyrroles and 7-methyl-1 vinyl-4,5,6,7-tetrahydroindole was established on the basis of the ¹H and ¹³C NMR spectra. It was found that the S-trans conformation of the N-vinyl group is preferred. It is shown that the condensation of ketoximes with acetylene proceeds through the formation of free pyrroles and that vinyl oximes are not intermediates in the condensation.     

4‐Substituted 2,3‐Dihydroisoxazoles as Masked Azomethine Ylides: Access to Pyrrole Derivatives by 1,5‐ and 1,7‐Dipolar Electrocyclizations of Enynyl Derivatives

The enynyl‐substituted 2,3‐dihydroisoxazoles (‘isoxazolines') 9 – 14 were prepared by highly (Z)‐selective Peterson olefination reaction from the corresponding carbaldehydes 6 – 8 . On short‐time thermolysis (280 – 406°/10 s) the TMS derivatives 9 – 11 give rise to the annulated pyrrolines 18 – 20 , which, in some cases, suffer CH₄ elimination affording the pyrroles 15 – 17 . In contrast, thermolysis of the terminal alkyne derivatives 12 – 14 leads to the bicyclic compounds 21 – 23 . The reaction pathways are discussed on the basis of the formation of conjugated azomethine ylides as key intermediates, which either undergo a 1,5‐cyclization to 18 – 20 or a 1,7‐ring‐closure affording cycloallene intermediates of type V , which are further transformed into the azepino pyrroles 21 – 23 .     

NMR investigations on alanyl-[15% 13C, 95% 15N]-proline: 15N chemical shifts and 13C?15N coupling constants

The dipeptide alanylproline has been prepared with the proline residue both ¹³C (15%) and ¹⁵N (95%) enriched. ¹⁵N NMR spectra of alanylproline reveal signals for both possible conformations—cis and trans—of the dipeptide backbone in solution. Different pK values for both conformers are obtained from the pH dependence of the ¹⁵N chemical shifts using a least square programme based on the Henderson–Hasselbach equation. These different values are discussed in terms of interaction between the α-amino group and the carboxylate group and between the carboxylate oxygen and the carbonyl oxygen of the dipeptide via hydrogen bonding. Further evidence for these interactions is obtained from the pH dependence of the ratio of the ¹⁵N NMR signal intensities of the two conformers. One, two or three bonded ¹³C? ¹⁵N coupling constants measured in the ¹³C NMR high resolution spectra have different values in the cis and trans isomers of alanylproline and thus indicate different geometry in the pyrrolidine ring.     

Synthesis of Isotope-labeled Aminoacids Contained in Servamycin Antibiotic

Approach was developed to a preparative synthesis of isotope-labeled aminoacids contained in servamycin IIB antibiotic. Glutamines labeled with ¹⁵N, ¹³N, and ²H were prepared in 70-80% yield starting with the corresponding labeled glutamic acids under catalysis with the glutamine synthetase enzyme. ^{1 5}N-2-aminoisobutanoic acid and ¹⁵N-isovaline were obtained by Strecker method in 65 and 31% yields respectively. All compounds synthesized were identified and characterized by NMR spectroscopy.     

Orthogonal synthesis of pyrroles and 1,2,3-triazoles from vinyl azides and 1,3-dicarbonyl compounds

Tri- and tetrasubstituted N-H pyrroles were prepared by the simple treatment of vinyl azides with 1,3-dicarbonyl compounds in toluene at 100 °C via 2H-azirine intermediates generated in situ. When the reactions of vinyl azides and 1,3-dicarbonyl compounds were performed in DMF in the presence of a catalytic amount of K₂CO₃, 1-vinyl-1,2,3-triazoles were obtained via 1,3-dipolar cycloaddition. These methodologies exploited orthogonal modes of chemical reactivity of vinyl azides, which could be achieved by slight modification of the reaction conditions.     

Synthesis and Properties of Isoindoline Nitroxide‐containing Porphyrins

Isoindoline nitroxide‐containing porphyrins were synthesized by the reaction of 5‐phenyldipyrromethane and 5‐(4′‐nitrophenyl)‐dipyrromethane with 5‐formyl‐1,1,3,3‐tetramethylisoindolin‐2‐yloxyl using the Lindsey method. These spin‐labeled porphyrins were further characterized by MS, UV, FTIR, ¹H‐NMR, cyclic voltammetry, electron paramagnetic resonance (EPR), and fluorescence spectroscopy. The electrochemical assay demonstrated that these isoindoline nitroxides‐containing porphyrins had similar electrochemical and redox properties as 5‐carboxy‐1,1,3,3‐tetramethylisoindolin‐2‐yloxyl. Electron paramagnetic resonance test exhibited these porphyrins possessed the hyperfine splittings and characteristic spectra of isoindoline nitroxides, with typical nitroxide g‐values and nitrogen isotropic hyperfine coupling constants. Fluorescence spectroscopy revealed that these porphyrins indicated fluorescence suppression characteristic of nitroxide–fluorophore systems. Moreover, their reduced isoindoline nitroxide‐containing porphyrins eliminated the fluorescence suppression and displayed strong fluorescence. Thus, these isoindoline nitroxide‐containing porphyrins may be considered as the potential fluorescent and EPR probes.     

The structures and formation of [C4H6N]+ ions 2—ion structures derived from 2-methylpropanenitrile

The loss of a hydrogen atom from ionized 2-methylpropanenitrile is preceded by a drastic rearrangement of the molecular ion. The result of this fragmentation is the generation of two stable structurally different [C₄H₆N]⁺ ions, formed via different pathways. Their structures can be established by a careful comparison of the metastable ion spectra, collision activation spectra, and charge stripping spectra from the compound and its three deuterium labeled analogues and from [C₄H₆N]⁺ ions generated from reference compounds via electron impact ionization or in selected ion/molecule reactions.     

Opp‐Dibenzoporphyrins as a Light‐Harvester for Dye‐Sensitized Solar Cells

New opp‐dibenzoporphyrins were prepared in a concise method that was based on a Pd⁰‐catalyzed cascade reaction. These porphyrins, which contained carboxylic‐acid linker groups on benzene rings that were fused to the porphyrin at their β,β′‐positions, were examined as sensitizers for dye‐sensitized solar cells for the first time. Whereas all of the porphyrins showed solar‐energy‐to‐electricity conversion, an opp‐dibenzoporphyrin with conjugated carboxylic‐acid linkers displayed the highest conversion efficiency and an exceptionally high J_sc value. Cyclic voltammetry of these porphyrins suggested that the fusion of two aromatic benzene rings onto the periphery of the porphyrin lowered the HOMO–LUMO energy gap; the incorporation of a conjugated carboxylic‐acid linker group decreased the HOMO–LUMO gap even further. These CV data are consistent with DFT calculations for these porphyrins and agree well with the UV/Vis absorption‐ and fluorescence spectra of these porphyrins.     

Synthesis and Characterization of a Series of Cationic Porphyrins Having Different Steric Effects

Abstract

A series of cationic porphyrins having only different steric effects and their cobalt complexes were synthesized. The cations of these porphyrins are meso-tetrakis(4-N-propylpyridyl)porphyrin (TPPyP⁴⁺), meso-tetrakis(4-N-ethylpyridyl)porphyrin (TEPyP⁴⁺) and meso-tetrakis(4-N-methylpyridyl)porphyrin (TMPyP⁴⁺), respectively. The anions are I^? (water soluble porphyrins) and ClO₄ ^? (organic solvent soluble porphyrins), respectively. The synthetic cationic porphyrins were characterized by elemental analysis, UV-visible absorption spectra, FTIR, MALDI-TOF-MS and ¹H-NMR spectra.     

Structural characterization of polypyrrole in the solid state by high resolution 15N NMR spectroscopy [II]

The solid-state ¹⁵N CP/MAS NMR spectra and ¹⁵N spin-lattice relaxation times (T₁) of doped and dedoped ¹⁵N-labeled polypyrroles prepared by electrochemical polymerization, have been measured by means of high-resolution solid-state ¹⁵N NMR. The ¹⁵N signal of polypyrrole consists of four peaks decomposed by line shape analysis. The four peaks obtained have been assigned to the various structures of polypyrrole. Further, the half-width of the ¹⁵N NMR spectra of polypyrroles is discussed as related to the electrical conductivity. © 1995 John Wiley & Sons, Inc.     

Synthesis of [18F]Fluoroarenes by Nucleophilic Radiofluorination of N‐Arylsydnones

A practical method for radiofluorination of anilines with [¹⁸F]fluoride via N ‐arylsydnone intermediates is described. These precursors are stable, easy to handle and facilitate direct and regioselective ¹⁸F‐labeling to prepare [¹⁸F]fluoroarenes. The value of this methodology is further highlighted by successful application to prepare an ¹⁸F‐labeled neuropeptide.