Binuclear trans‐Bis(β‐iminoaryloxy)palladium(II) Complexes Doubly Linked with Pentamethylene Spacers: Structure‐Dependent Flapping Motion and Heterochiral Association Behavior of the Clothespin‐Shaped Molecules

The synthesis, structure, and solution‐state behavior of clothespin‐shaped binuclear trans‐bis(β‐iminoaryloxy)palladium(II) complexes doubly linked with pentamethylene spacers are described. Achiral syn and racemic anti isomers of complexes 1 – 3 were prepared by treating Pd(OAc)₂ with the corresponding N,N′‐bis(β‐hydroxyarylmethylene)‐1,5‐pentanediamine and then subjecting the mixture to chromatographic separation. Optically pure (100 % ee) complexes, (+)‐anti‐ 1 , (+)‐anti‐ 2 , and (+)‐anti‐ 3 , were obtained from the racemic mixture by employing a preparative HPLC system with a chiral column. The trans coordination and clothespin‐shaped structures with syn and anti conformations of these complexes have been unequivocally established by X‐ray diffraction studies. ¹H NMR analysis showed that (±)‐anti‐ 1 , (±)‐anti‐ 2 , syn‐ 2 , and (±)‐anti‐ 3 display a flapping motion by consecutive stacking association/dissociation between cofacial coordination planes in [D₈]toluene, whereas syn‐ 1 and syn‐ 3 are static under the same conditions. The activation parameters for the flapping motion (ΔH^≠ and ΔS^≠) were determined from variable‐temperature NMR analyses as 50.4 kJ mol^?1 and 60.1 J mol^?1 K^?1 for (±)‐anti‐ 1 , 31.0 kJ mol^?1 and ?22.7 J mol^?1 K^?1 for (±)‐anti‐ 2 , 29.6 kJ mol^?1 and ?57.7 J mol^?1 K^?1 for syn‐ 2 , and 35.0 kJ mol^?1 and 0.5 J mol^?1 K^?1 for (±)‐anti‐ 3 , respectively. The molecular structure and kinetic parameters demonstrate that all of the anti complexes flap with a twisting motion in [D₈]toluene, although (±)‐anti‐ 1 bearing dilated Z‐shaped blades moves more dynamically than I‐shaped (±)‐anti‐ 2 or the smaller (±)‐anti‐ 3 . Highly symmetrical syn‐ 2 displays a much more static flapping motion, that is, in a see‐saw‐like manner. In CDCl₃, (±)‐anti‐ 1 exhibits an extraordinary upfield shift of the ¹H NMR signals with increasing concentration, whereas solutions of (+)‐anti‐ 1 and the other syn/anti analogues 2 and 3 exhibit negligible or slight changes in the chemical shifts under the same conditions, which indicates that anti‐ 1 undergoes a specific heterochiral association in the solution state. Equilibrium constants for the dimerizations of (±)‐ and (+)‐anti‐ 1 in CDCl₃ at 293 K were estimated by curve‐fitting analysis of the ¹H NMR chemical shift dependences on concentration as 26 M ^?1 [K_D(racemic)] and 3.2 M ^?1 [K_D(homo)], respectively. The heterochiral association constant [K_D(hetero)] was estimated as 98 M ^?1, based on the relationship K_D(racemic)=1/2 K_D(homo)+1/4 K_D(hetero). An inward stacking motif of interpenetrative dimer association is postulated as the mechanistic rationale for this rare case of heterochiral association.     

Chemistry of NOx and HNO3 Molecules with Gas-Phase Hydrated O.− and OH− Ions

The gas-phase reactions of O ^{. −}(H₂O)_n and OH⁻(H₂O)_n, n=20–38, with nitrogen-containing atmospherically relevant molecules, namely NO_x and HNO₃, are studied by Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometry and theoretically with the use of DFT calculations. Hydrated O ^{. −} anions oxidize NO ^. and NO₂ ^. to NO₂⁻ and NO₃⁻ through a strongly exothermic reaction with enthalpy of −263±47 kJ mol⁻¹ and −286±42 kJ mol⁻¹, indicating a covalent bond formation. Comparison of the rate coefficients with collision models shows that the reactions are kinetically slow with 3.3 and 6.5 % collision efficiency. Reactions between hydrated OH⁻ anions and nitric oxides were not observed in the present experiment and are most likely thermodynamically hindered. In contrast, both hydrated anions are reactive toward HNO₃ through proton transfer from nitric acid, yielding hydrated NO₃⁻. Although HNO₃ is efficiently picked-up by the water clusters, forming (HNO₃)_0–2(H₂O)_mNO₃⁻ clusters, the overall kinetics of nitrate formation are slow and correspond to an efficiency below 10 %. Combination of the measured reaction thermochemistry with literature values in thermochemical cycles yields ΔH_f(O⁻(aq.))=48±42 kJ mol⁻¹ and ΔH_f(NO₂⁻(aq.))=−125±63 kJ mol⁻¹.     

High-level computational study on the thermochemistry of saturated and unsaturated three- and four-membered nitrogen and phosphorus rings

The heats of formation and strain energies for saturated and unsaturated three- and four-membered nitrogen and phosphorus rings have been calculated using G2 theory. G2 heats of formation (ΔH_f298) of triaziridine [(NH)₃], triazirine (N₃H), tetrazetidine [(NH)₄], and tetrazetine (N₄H₂) are 405.0, 453.7, 522.5, and 514.1 kJ mol⁻¹, respectively. Tetrazetidine is unstable (121.5 kJ mol⁻¹ at 298 K) with respect to its dissociation into two trans-diazene (N₂H₂) molecules. The dissociation of tetrazetine into molecular nitrogen and trans-diazene is highly exothermic (ΔH₂₉₈ = −308.3 kJ mol⁻¹ calculated using G2 theory). G2 heats of formation (ΔH_f298) of cyclotriphosphane [(PH)₃], cyclotriphosphene (P₃H), cyclotetraphosphane [(PH)₄], and cyclotetraphosphene (P₄H₂) are 80.7, 167.2, 102.7, and 170.7 kJ mol⁻¹, respectively. Cyclotetraphosphane and cyclotetraphosphene are stabilized by 145.8 and 101.2 kJ mol⁻¹ relative to their dissociations into two diphosphene molecules or into diphosphene (HP(DOUBLE BOND)PH) and diphosphorus (P₂), respectively. The strain energies of triaziridine [(NH)₃], triazirine (N₃H), tetrazetidine [(NH)₄], and tetrazetine (N₄H₂) were calculated to be 115.0, 198.3, 135.8, and 162.0 kJ mol⁻¹, respectively (at 298 K). While the strain energies of the nitrogen three-membered rings in triaziridine and triazirine are smaller than the strain energies of cyclopropane (117.4 kJ mol⁻¹) and cyclopropene (232.2 kJ mol⁻¹), the strain energies of the nitrogen four-membered rings in tetrazetidine and tetrazetine are larger than those of cyclobutane (110.2 kJ mol⁻¹) and cyclobutene (132.0 kJ mol⁻¹). In contrast to higher strain in cyclopropane as compared with cyclobutane, triaziridine is less strained than tetrazetidine. The strain energies of cyclotriphosphane [(PH)₃, 21.8 kJ mol⁻¹], cyclotriphosphene (P₃H, 34.6 kJ mol⁻¹), cyclotetraphosphane [(PH)₄, 24.1 kJ mol⁻¹], and cyclotetraphosphene (P₄H₂, 18.5 kJ mol⁻¹), calculated at the G2 level are considerably smaller than those of their carbon and nitrogen analog. Cyclotetraphosphene containing the P(DOUBLE BOND)P double bond is less strained than cyclotetraphosphane, in sharp contrast to the ratio between the strain energies for the analogous unsaturated and saturated carbon and nitrogen rings. © 1997 John Wiley & Sons, Inc. Int J Quant Chem 62 : 373–384, 1997     

The vibrational and NMR spectra,conformations and ab initio calculations of aminomethylene,propanedinitrile and itsN-methyl derivatives

The IR and Raman spectra of aminomethylene propanedinitrile (AM) [H₂N-CH=C(CN)₂], (methylamino)methylene propanedinitrile (MAM) [CH₃NH-CH=C(CN)₂] and (dimethylamino)methylene propanedinitrile (DMAM) [(CH₃)₂N-CH=C(CN)₂] as solids and solutes in various solvents have been recorded in the region 4000-50 cm^–1. AM and DMAM can exist only as one conformer. From the vibrational and NMR spectra of MAM in solutions, the existence of two conformers with the methyl group orientedanti andsyn toward the double C=C bond were confirmed. The enthalpy difference H ⁰ between the conformers was measured to be 3.7±1.4 kJ mol^–1 from the IR spectra in acetonitrile solution and 3.4±1.1 kJ mol^–1 from the NMR spectra in DMSO solution. Semiempirical (AM1, PM3, MNDO, MINDO3) and ab initio SCF calculations using a DZP basis set were carried out for all three compounds. The calculations support the existence of two conformersanti andsyn for MAM, withanti being 7.8 kJ mol^–1 more stable thansyn from ab initio and 8.6, 13.4, 11.6, and 10.8 kJ mor^–1 from AM1, PM3, MNDO, and MINDO3 calculations, respectively. Finally, complete assignments of the vibrational spectra for all three compounds were made with the aid of normal coordinate calculations employing scaled ab initio force constants. The same scale factors were optimized on the experimental frequencies of all three compounds, and a very good agreement between calculated and experimental frequencies was achieved.     

Mechanism and structural aspects of thermal Curtius rearrangement. Quantum chemical study

The electronic and geometric structures of formyl, acetyl, and benzoyl azides were studied and fragments of the potential surfaces for the thermal Curtius rearrangement of these azides into the corresponding isocyanates were calculated by density functional theory at the PBE/TZ2P level. Acyl azides adopt two stable, conformations syn and anti, with respect to the C-N bond. The syn conformers are more stable than their anti analogs. The activation energies of the syn-anti isomerization in the series under study are 9.4, 7.0, and 9.2 kcal mol⁻¹, respectively, and the activation energies of the reverse reaction are 8.5, 6.1, and 2.5 kcal mol⁻¹. The rearrangement of syn-acyl azides is a one-step process, in which elimination of N₂ occurs synchronously with the rearrangement of atoms and bonds to form isocyanates. The activation energies of the rearrangements of syn-HC(O)N₃, syn-MeC(O)N₃, and syn-PhC(O)N₃ are 28.0, 32.9, and 34.5 kcal mol⁻¹, respectively. The rearrangement of the anti conformers of the above-mentioned azides involves the formation of singlet acylnitrene. The activation energies of the latter process are 34.6, 32.9, and 32.3 kcal mol⁻¹, respectively. The activation energies of the rearrangement of acylnitrenes into isocyanates are 20.9, 18.9, and 13.6 kcal mol⁻¹, respectively. The energy characteristics of the process and the structural data for the starting compounds, final products, and transition states provide evidence that the thermal Curtius rearrangement occurs predominantly by a concerted mechanism. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 2200–2209, October, 2005.     

The kinetics and mechanisms of gas phase elimination of primary,secondary, and tertiary 2‐hydroxyalkylbenzenes

2‐Phenylethanol, racemic 1‐phenyl‐2‐propanol, and 2‐methyl‐1‐phenyl‐2‐propanol have been pyrolyzed in a static system over the temperature range 449.3–490.6°C and pressure range 65–198 torr. The decomposition reactions of these alcohols in seasoned vessels are homogeneous, unimolecular, and follow a first‐order rate law. The Arrhenius equations for the overall decomposition and partial rates of products formation were found as follows: for 2‐phenylethanol, overall rate log k₁(s⁻¹)=12.43−228.1 kJ mol⁻¹ (2.303 RT)⁻¹, toluene formation log k₁(s⁻¹)=12.97−249.2 kJ mol⁻¹ (2.303 RT)⁻¹, styrene formation log k₁(s⁻¹)=12.40−229.2 kJ mol⁻¹(2.303 RT)⁻¹, ethylbenzene formation log k₁(s⁻¹)=12.96−253.2 kJ mol⁻¹(2.303 RT)⁻¹; for 1‐phenyl‐2‐propanol, overall rate log k₁(s⁻¹)=13.03−233.5 kJ mol⁻¹(2.303 RT)⁻¹, toluene formation log k₁(s⁻¹)=13.04−240.1 kJ mol⁻¹(2.303 RT)⁻¹, unsaturated hydrocarbons+indene formation log k₁(s⁻¹)=12.19−224.3 kJ mol⁻¹(2.303 RT)⁻¹; for 2‐methyl‐1‐phenyl‐2‐propanol, overall rate log k₁(s⁻¹)=12.68−222.1 kJ mol⁻¹(2.303 RT)⁻¹, toluene formation log k₁(s⁻¹)=12.65−222.9 kJ mol⁻¹(2.303 RT)⁻¹, phenylpropenes formation log k₁(s⁻¹)=12.27−226.2 kJ mol⁻¹(2.303 RT)⁻¹. The overall decomposition rates of the 2‐hydroxyalkylbenzenes show a small but significant increase from primary to tertiary alcohol reactant. Two competitive eliminations are shown by each of the substrates: the dehydration process tends to decrease in relative importance from the primary to the tertiary alcohol substrate, while toluene formation increases. © 1999 John Wiley & Sons, Inc. Int J Chem Kinet 31: 401–407, 1999     

Two Three‐Dimensional Metal‐Organic Frameworks Constructed from Alkaline Earth Metal Cations (Sr and Ba) and 5‐Nitroisophthalicacid – Synthesis,Charaterization, and Thermochemistry

Two MOFs of [Sr^II(5‐NO₂‐BDC)(H₂O)₆] ( 1 ) and [Ba^II(5‐NO₂‐BDC)(H₂O)₆] ( 2 ) have been synthesized in water using alkaline earth metal salts and the rigid organic ligand 5‐NO₂‐H₂BDC. The compounds were characterized by elemental analysis, infrared spectrum, thermal analysis, and X‐ray crystallography. Crystal structure analyses have shown that the two complexes are isostructural as evidenced by IR spectra and TG‐DTA. Both compounds present three‐dimensional frameworks built up from infinite chains of edge‐sharing twelve‐membered rings through O–H···O hydrogen bonds. The specific heat capacities of the title complexes have been determined by an improved RD496‐III microcalorimeter with the values of (109.29 ± 0.693) J mol⁻¹ K⁻¹ and (81.162 ± 0.858) J mol⁻¹ K⁻¹ at 298.15 K, and the molar enthalpy changes of the formation reactions of complexes at 298.15 K were calculated as (4.897 ± 0.008) kJ mol⁻¹ and (2.617 ± 0.009) kJ mol⁻¹, respectively.     

Studies on the oxidation mechanism of H2S based on direct examination of the key reactions

By conducting an excimer laser photolysis (193 and 248 nm) behind shock waves, three elementary reactions important in the oxidation of H₂S have been examined, where, H, O, and S atoms have been monitored by the atomic resonance absorption spectrometry. For HS + O₂ → products (1), the rate constants evaluated by numerical simulations are summarized as: k₁ = 3.1 × 10⁻¹¹exp|-75 kJ mol⁻¹/RT| cm³molecule⁻¹s⁻¹ (T = 1400-1850 K) with an uncertainty factor of about 2. Direct measurements of the rate constants for S + O2 → SO + O (2), and SO + O₂ → SO₂ + O (3) yield k₂ = (2.5 ± 0.6) × 10⁻¹¹ exp|-(15.3 ± 2.5) kJ mol⁻¹/RT| cm³molecule⁻¹s⁻¹ (T = 980-1610 K) and, k₃ = (1.7 ± 0.9) × 10⁻¹² exp|-(34 ± 11) kJ mol⁻¹/RT| cm³molecule⁻¹s⁻¹ (T = 1130-1640 K), respectively. By summarizing these data together with the recent experimental results on the H(SINGLE BOND)S(SINGLE BOND)O reaction systems, a new kinetic model for the H₂S oxidation process is constructed. It is found that this simple reaction scheme is consistent with the experimental result on the induction time of SO₂ formation obtained by Bradley and Dobson. © 1997 John Wiley & Sons, Inc. Int J Chem Kinet 29: 57–66, 1997.     

Thermochemical properties from ab initio calculations: π- and σ-Free radicals of importance in soot formation: •C3H3 (propargyl), •C4H3, •C13H9 (phenalenyl), •C6H5 (phenyl), •C10H7 (naphthyl), •C14H9 (anthryl), •C14H9 (phenanthryl), •C16H9 (pyrenyl), •C12H7 (acenaphthyl), and •C12H9 (biphenylyl)

The calculated difference in the standard heat of formation Δ Δ_fH°(298.15) of n- and i-C₄H₃^• free radicals is 37.9 kJ mol⁻¹ for G3MP2B3 and 45.0 kJ mol⁻¹ for CCSD(T)-CBS (W1U) calculations, which seems to preclude the direct even-carbon radical pathway to benzene and higher PAH (polycyclic aromatic hydrocarbon) formation including soot in a hydrocarbon flame. For the phenyl-type σ-radicals listed in the title, absolute values of Δ_fH°(298.15) have been calculated using G3MP2B3-computed values of bond dissociation energies D°(298.15) and combined with experimental values of Δ_fH° (298.15) for the parent hydrocarbon because of a slight systematic overprediction of the thermodynamic stability of large PAHs by the applied computational G3MP2B3 method. Standard enthalpies of formation Δ_fH°(298.15) as well as absolute entropies S° and heat capacities C°_p are given for a series of π- and σ-free radicals important to combustion as a function of temperature. A spread of roughly 40 kJ mol⁻¹ in the average C H bond strength of PAH leading to σ-radicals has been calculated, the lowest leading to 4-phenanthryl (463.6 kJ mol⁻¹), the highest leading to 2-biphenylyl radical (502.5 kJ mol⁻¹). © 2008 Wiley Periodicals, Inc. Int J Chem Kinet 40: 395–415, 2008     

Kinetic study of the ligand substitution on the trimethylplatinum(iv) complexes with unidentate ligands

Ligand substitution kinetics for the reaction [Pt^IVMe₃(X)(NN)]+NaY=[Pt^IVMe₃(Y)(NN)]+NaX, where NN=bipy or phen, X=MeO⁻, CH₃COO⁻, or HCOO⁻, and Y=SCN⁻ or N₃⁻, has been studied in methanol at various temperatures. The kinetic parameters for the reaction are as follows. The reaction of [PtMe₃(OMe)(phen)] with NaSCN: k₁=36.1±10.0 s⁻¹; ΔH₁^≠=65.9±14.2 kJ mol⁻¹; ΔS₁^≠=6±47 J mol⁻¹ K⁻¹; k₋₂=0.0355±0.0034 s⁻¹; ΔH₋₂^≠=63.8±1.1 kJ mol⁻¹; ΔS₋₂^≠=−58.8±3.6 J mol⁻¹ K⁻¹; and k₋₁/k₂=148±19. The reaction of [PtMe₃(OAc)(bipy)] with NaN₃: k₁=26.2±0.1 s⁻¹; ΔH₁^≠=60.5±6.6 kJ mol⁻¹; ΔS₁^≠=−14±22 J mol⁻¹K⁻¹; k₋₂=0.134±0.081 s⁻¹; ΔH₋₂^≠=74.1±24.3 kJ mol⁻¹; ΔS₋₂^≠=−10±82 J mol⁻¹K⁻¹; and k₋₁/k₂=0.479±0.012. The reaction of [PtMe₃(OAc)(bipy)] with NaSCN: k₁=26.4±0.3 s⁻¹; ΔH₁^≠=59.6±6.7 kJ mol⁻¹; ΔS₁^≠=−17±23 J mol⁻¹K⁻¹; k₋₂=0.174±0.200 s⁻¹; ΔH₋₂^≠=62.7±10.3 kJ mol⁻¹; ΔS₋₂^≠=−48±35 J mol⁻¹K⁻¹; and k₋₁/k₂=1.01±0.08. The reaction of [PtMe₃(OOCH)(bipy)] with NaN₃: k₁=36.8±0.3 s⁻¹; ΔH₁^≠=66.4±4.7 kJ mol⁻¹; ΔS₁^≠=7±16 J mol⁻¹K⁻¹; k₋₂=0.164±0.076 s⁻¹; ΔH₋₂^≠=47.0±18.1 kJ mol⁻¹; ΔS₋₂^≠=−101±61 J mol⁻¹ K⁻¹; and k₋₁/k₂=5.90±0.18. The reaction of [PtMe₃(OOCH)(bipy)] with NaSCN: k₁ =33.5±0.2 s⁻¹; ΔH₁^≠=58.0±0.4 kJ mol⁻¹; ΔS₁^≠=−20.5±1.6 J mol⁻¹ K⁻¹; k₋₂=0.222±0.083 s⁻¹; ΔH₋₂^≠=54.9±6.3 kJ mol⁻¹; ΔS₋₂^≠=−73.0±21.3 J mol⁻¹ K⁻¹; and k₋₁/k₂=12.0±0.3. Conditional pseudo-first-order rate constant k₀ increased linearly with the concentration of NaY, while it decreased drastically with the concentration of NaX. Some plausible mechanisms were examined, and the following mechanism was proposed. [Note to reader: Please see article pdf to view this scheme.] © 1998 John Wiley & Sons, Inc. Int J Chem Kinet 30: 523–532, 1998     

The synthesis and conformational behaviour of 2,11-dithia[3,3]metacyclophanes with internal phenyl substituents.

The synthesis of syn- and anti-9-methyl-18-phenyl- and anti-9, 18-diphenyl 2, 11 dithia[3,3]metacyclophanes is described, together with their variable temperature ¹Hmr spectra. Only partial rotation of the phenyl substituents (gD^≠_c ?50 kJ. mol^?1) is believed to occur.     

A structural and theoretical study of the intermolecular interactions in 8‐hydroxyquinolinium‐7‐carboxylate monohydrate

In the title compound, C₁₀H₇NO₃·H₂O, the zwitterionic organic molecules and the water molecules are connected by N—H...O and O—H...O hydrogen bonds to form ribbons, and π–π stacking interactions expand these ribbons into a three‐dimensional net. The energies of these hydrogen bonds adopt values typical for mildly weak interactions (3.33–7.75 kcal mol⁻¹; 1 kcal mol⁻¹ = 4.184 kJ mol⁻¹). The total π–π stacking interactions between aromatic molecules can be classified as mildly strong (energies of 15.3 and 33.9 kcal mol⁻¹), and they are made up of multiple constituent π–π interactions between six‐membered rings. The short intermolecular C—H...O contact between two zwitterionic molecules is nonbonding in character.     

A new polymorph of phenylselenium trichloride

A second polymorph of phenylselenium trichloride, PhSeCl₃ or C₆H₅Cl₃Se, is disclosed, which is comprised of asymmetric chlorine‐bridged noncovalent dimer units rather than polymeric chains. These dimers are each weakly bound to an adjacent dimer through noncovalent Se…Cl bonding interactions. Phenyl rings within each dimer are oriented in a syn fashion. Density functional theory (DFT) calculations reveal that the putative anti isomer is within 5 kJ mol^?1 of the experimentally observed form. This structure represents the first additional polymorph discovered for an organoselenium trihalide compound.     

Theoretical study of the structure and unimolecular decomposition pathways of ethyloxonium, [CH3CH2OH2]+

Ab initio molecular orbital calculations with split-valence plus polarization basis sets and incorporating valence-electron correlation have been performed to determine the equilibrium structure of ethyloxonium ([CH₃CH₂OH₂]⁺) and examine its modes of unimolecular dissociation. An asymmetric structure (1) is predicted to be the most stable form of ethyloxonium, but a second conformational isomer of C_s symmetry lies only 1.4 kJ mol^?1 higher in energy than 1. Four unimolecular decomposition pathways for 1 have been examined involving loss of H₂, CH₄, H₂O or C₂H₄. The most stable fragmentation products, lying 65 kJ mol^?1 above 1, are associated with the H₂ elimination reaction. However, large barriers of 257 and 223 kJ mol^?1 have to be surmounted for H₂ and CH₄ loss, respectively. On the other hand, elimination of either C₂H₄ or H₂O from ethyloxonium can proceed without a barrier to the reverse associations and, with total endothermicities of 130 and 160 kJ mol^?1, respectively, these reactions are expected to dominate at lower energies. A second important equilibrium structure on the surface is a hydrogen-bridged complex, lying 53 kJ mol^?1 above 1. This complex is involved in the C₂H₄ elimination reaction, acts as an intermediate in the proton-transfer reaction connecting [C₂H₅]⁺ +H₂O and C₂H₄ + [H₃O]⁺ and plays an important role in the isotopic scrambling that has been observed experimentally in the elimination of either H₂O or C₂H₄ from ethyloxonium. The proton affinity of ethanol was calculated as 799 kJ mol^?1, in close agreement with the experimental value of 794 kJ mol^?1.     

Purine 3′:5′‐cyclic nucleotides with the nucleobase in a syn orientation: cAMP,cGMP and cIMP

Purine 3′:5′‐cyclic nucleotides are very well known for their role as the secondary messengers in hormone action and cellular signal transduction. Nonetheless, their solid‐state conformational details still require investigation. Five crystals containing purine 3′:5′‐cyclic nucleotides have been obtained and structurally characterized, namely adenosine 3′:5′‐cyclic phosphate dihydrate, C₁₀H₁₂N₅O₆P·2H₂O or cAMP·2H₂O, (I), adenosine 3′:5′‐cyclic phosphate 0.3‐hydrate, C₁₀H₁₂N₅O₆P·0.3H₂O or cAMP·0.3H₂O, (II), guanosine 3′:5′‐cyclic phosphate pentahydrate, C₁₀H₁₂N₅O₇P·5H₂O or cGMP·5H₂O, (III), sodium guanosine 3′:5′‐cyclic phosphate tetrahydrate, Na⁺·C₁₀H₁₁N₅O₇P⁻·4H₂O or Na(cGMP)·4H₂O, (IV), and sodium inosine 3′:5′‐cyclic phosphate tetrahydrate, Na⁺·C₁₀H₁₀N₄O₇P⁻·4H₂O or Na(cIMP)·4H₂O, (V). Most of the cyclic nucleotide zwitterions/anions [two from four cAMP present in total in (I) and (II), cGMP in (III), cGMP⁻ in (IV) and cIMP⁻ in (V)] are syn conformers about the N‐glycosidic bond, and this nucleobase arrangement is accompanied by C_rib—H…N_pur hydrogen bonds (rib = ribose and pur = purine). The base orientation is tuned by the ribose pucker. An analysis of data obtained from the Cambridge Structural Database made in the context of syn–anti conformational preferences has revealed that among the syn conformers of various purine nucleotides, cyclic nucleotides and dinucleotides predominate significantly. The interactions stabilizing the syn conformation have been indicated. The inter‐nucleotide contacts in (I)–(V) have been systematized in terms of the chemical groups involved. All five structures display three‐dimensional hydrogen‐bonded networks.     

Cross‐Aldol Reaction of Isatin with Acetone Catalyzed by Leucinol: A Mechanistic Investigation

Comprehensive mechanistic studies on the enantioselective aldol reaction between isatin ( 1 a ) and acetone, catalyzed by L ‐leucinol ( 3 a ), unraveled that isatin, apart from being a substrate, also plays an active catalytic role. Conversion of the intermediate oxazolidine 4 into the reactive syn‐enamine 6 , catalyzed by isatin, was identified as the rate‐determining step by both the calculations (ΔG^≠=26.1 kcal mol^?1 for the analogous L ‐alaninol, 3 b ) and the kinetic isotope effect (k_H/k_D=2.7 observed for the reaction using [D₆]acetone). The subsequent reaction of the syn‐enamine 6 with isatin produces (S)‐ 2 a (calculated ΔG^≠=11.6 kcal mol^?1). The calculations suggest that the overall stereochemistry is controlled by two key events: 1) the isatin‐catalyzed formation of the syn‐enamine 6 , which is thermodynamically favored over its anti‐rotamer 7 by 2.3 kcal mol^?1; and 2) the high preference of the syn‐enamine 6 to produce (S)‐ 2 a on reaction with isatin ( 1 a ) rather than its enantiomer (ΔΔG^≠=2.6 kcal mol^?1).     

Facile Conversion of syn‐[FeIV(O)(TMC)]2+ into the anti Isomer via Meunier's Oxo–Hydroxo Tautomerism Mechanism

The syn and anti isomers of [Fe^IV(O)(TMC)]²⁺ (TMC=tetramethylcyclam) represent the first isolated pair of synthetic non‐heme oxoiron(IV) complexes with identical ligand topology, differing only in the position of the oxo unit bound to the iron center. Both isomers have previously been characterized. Reported here is that the syn isomer [Fe^IV(O_syn)(TMC)(NCMe)]²⁺ ( 2 ) converts into its anti form [Fe^IV(O_anti)(TMC)(NCMe)]²⁺ ( 1 ) in MeCN, an isomerization facilitated by water and monitored most readily by ¹H NMR and Raman spectroscopy. Indeed, when H₂¹⁸O is introduced to 2 , the nascent 1 becomes ¹⁸O‐labeled. These results provide compelling evidence for a mechanism involving direct binding of a water molecule trans to the oxo atom in 2 with subsequent oxo–hydroxo tautomerism for its incorporation as the oxo atom of 1 . The nonplanar nature of the TMC supporting ligand makes this isomerization an irreversible transformation, unlike for their planar heme counterparts.     

Kinetics and Mechanism Study of the Substitution Reactions of the Chloride Ligand in Dichloro(5,10,15,20)‐tetraphenyl‐21H,23H‐porphinato)tin(IV) by Organic Bases in Dimethylformamide Solvent

Substitution reactions of a Cl⁻ ligand in [SnCl₂(tpp)] (tpp=5,10,15,20‐tetraphenyl‐21H,23H‐porphinato(2−)) by five organic bases i.e., butylamine (BuNH₂), sec‐butylamine (^sBuNH₂), tert‐butylamine (^tBuNH₂), dibutylamine (Bu₂NH), and tributylamine (Bu₃N), as entering nucleophile in dimethylformamide at I=0.1M (NaNO₃) and 30–55° were studied. The second‐order rate constants for the substitution of a Cl⁻ ligand were found to be (36.86±1.14)⋅10⁻³, (32.91±0.79)⋅10⁻³, (22.21±0.58)⋅10⁻³, (19.09±0.66)⋅10⁻³, and (1.36±0.08)⋅10⁻³ M ⁻¹s⁻¹ at 40° for BuNH₂, ^tBuNH₂, ^sBuNH₂, Bu₂NH, and Bu₃N, respectively. In a temperature‐dependence study, the activation parameters ΔH^≠ and ΔS^≠ for the reaction of [SnCl₂(tpp)] with the organic bases were determined as 38.61±4.79 kJ mol⁻¹ and −150.40±15.46 J K⁻¹mol⁻¹ for BuNH₂, 40.95±4.79 kJ mol⁻¹ and −143.75±15.46 J K⁻¹mol⁻¹ for ^tBuNH₂, 30.88±2.43 kJ mol⁻¹ and −179.00±7.82 J K⁻¹mol⁻¹ for ^sBuNH₂, 26.56±2.97 kJ mol⁻¹ and −194.05±9.39 J K⁻¹mol⁻¹ for Bu₂NH, and 39.37±2.25 kJ mol⁻¹ and −174.68±7.07 J K⁻¹ mol⁻¹ for Bu₃N. From the linear rate dependence on the concentration of the bases, the span of k₂ values, and the large negative values of the activation entropy, an associative (A) mechanism is deduced for the ligand substitution.     

Ab Initio energetics of Si?O bond cleavage

A multilevel approach that combines high‐level ab initio quantum chemical methods applied to a molecular model of a single, strain‐free Si O Si bridge has been used to derive accurate energetics for Si O bond cleavage. The calculated Si O bond dissociation energy and the activation energy for water‐assisted Si O bond cleavage of 624 and 163 kJ mol⁻¹, respectively, are in excellent agreement with values derived recently from experimental data. In addition, the activation energy for H₂O‐assisted Si O bond cleavage is found virtually independent of the amount of water molecules in the vicinity of the reaction site. The estimated reaction energy for this process including zero‐point vibrational contribution is in the range of −5 to 19 kJ mol⁻¹. © 2017 Wiley Periodicals, Inc.     

The standard enthalpy of formation of silver pivalate

The standard enthalpy of combustion of crystalline silver pivalate, (CH₃)₃CC(O)OAg (AgPiv), was determined in an isoperibolic calorimeter with a self-sealing steel bomb, Δ_c H ⁰ (AgPiv, cr)= −2786.9±5.6 kJ mol⁻¹. The value of standard enthalpy of formation was derived for crystalline state: Δ_f H ⁰(AgPiv,cr)= −466.9±5.6 kJ mol⁻¹. Using the enthalpy of sublimation, measured earlier, the enthalpy of formation of gaseous dimer was obtained: Δ_f H ⁰(Ag₂Piv₂,g)= −787±14 kJ mol⁻¹. The enthalpy of reaction (CH₃)₃CC(O)OAg(cr)=Ag(cr)+(CH₃)₃CC(O)O^.(g) was estimated, Δ_r H ⁰=202 kJ mol⁻¹.