Substituted <Emphasis Type="Italic">N</Emphasis>-aminothioglycolurils containing thiosemicarbazone moiety and their cytotoxic activity in vitro

A library of hybrid molecules bearing thioglycoluril and (hetero)aromatic aldehyde thiosemicarbazone moieties was synthesized via a tandem hydrazone formation—ring contraction reaction of 5,7-dialkyl-3-thioxoperhydroimidazo[4,5-e]-1,2,4-triazin-6-ones with (hetero)aromatic aldehydes. All synthesized compounds were tested for their cytotoxic activity against rhabdomyosarcoma, A549, and MS human cancer cell lines by MTT-assay. Among the derivatives, (E)-4-benzylideneamino-1,3-dimethyl-5-thioxohexahydroimidazo[4,5-d]imidazol-2(1H)-one 1f was found to have the most marked antiproliferative activity toward the tested cell lines (1f: IC\(_{50}= 20.6,\) 23.7, and 6.4 \(\upmu \)M, respectively). The IC\(_{50}\) value of thioglycoluril 1f against normal human embryonic kidney cells HEK293 was 72.5 \(\upmu \)M, which appeared to be 3–11-fold higher than IC\(_{50}\) values of 1f against human cancer cells.     

An efficient and facile synthesis of new tetracyclic fused pyrazolo[4,3-<Emphasis Type="Italic">c</Emphasis>][1,2,4]triazino[4,5-<Emphasis Type="Italic">a</Emphasis>]quinolin-4(5<Emphasis Type="Italic">H</Emphasis>)-ones

Reaction of amidrazones 1a–1i with (1,5-dihydro-3-methyl-5-oxo-1-phenyl-4H-pyrazol-4-ylidene)propanedinitrile (2) in ethyl acetate solution in one-step reaction led to the formation of unprecedented pyrazolo[4,3-c][1,2,4]triazino[4,5-a]quinolin-4(5H)-ones 3a–3g along with pyrazolo[4,3-c][1,2,4]triazino[4,5-a]quinolin-12b-oles 3h–3m in moderate to excellent yields. These novel heterocycles were formed via a Michael addition reaction followed by intramolecular cyclization via a dearomatization process.     

Synthesis and antifungal activity of dehydroabietic acid-based 1,3,4-thiadiazole-thiazolidinone compounds

In an attempt to search for new natural products-based antifungal agents, a series of novel dehydroabietic acid derivatives bearing a 1,3,4-thiadiazole-thiazolidinone moiety were designed and synthesized. The primary bioassay used showed that at a concentration of \(50\,\upmu \hbox {g}/\hbox {mL}\), the target compounds 3c, 3f, and 3n exhibited excellent antifungal activity (91.3 % inhibition) against Gibberella zeae, which was equivalent to the commercial antifungal drug azoxystrobin (positive control).     

Synthesis and antibacterial evaluation of new N- and S-glycosides analogues with dinitrophenyl-substituted heterocyclic bases

Four N- and S-glycosides 13–16 having nucleobases 7–12 binding to sugar molecules from one side and to 3,5-dinitrophenyl moieties from another side were synthesized from 3,5-dinitrobenzoic acid 2. The synthetic intermediates, hydrazide 5 and thiosemicarbazide 6 regarded as important key compounds for the synthesis of nucleobases 7–12, each was obtained by two approaches. Structures of synthesized compounds were determined spectroscopically. Antibacterial activities for synthetic intermediates and glycosides were assessed using the paper disk diffusion method against Gram-negative bacteria: Pseudomonas aeruginosa, Pseudomonas fluorescens, and Escherichia coli and Gram-positive bacteria: Bacillus cereus and Staphylococcus aureus. Some of the synthetic compounds showed variant activity against some of the microorganisms tested. Nucleobases 8–10 and 12 showed moderate to slight activity against microorganisms under test at relatively high concentration, while the N-glycosides 14 and 15 exhibited persistent effect even at lower concentrations. Commercially available antibiotics polymyxine and oxytetracycline were used as positive controls.     

Synthesis and three-dimensional quantitative structure-activity relationship study of quinazoline derivatives containing a 1,3,4-oxadiazole moiety as efficient inhibitors against <Emphasis Type="BoldItalic">Xanthomonas axonopodis pv. citri</Emphasis>

A series of quinazoline derivatives containing a 1,3,4-oxadiazole moiety were synthesized and evaluated for their antibacterial activities against Xanthomonas axonopodis pv. citri (Xac) and Ralstonia solanacearum (Rs). Antibacterial bioassays indicated that most of target compounds exhibited significant antibacterial activities against Xac and Rs in vitro. Strikingly, compounds 6d–6i, 6m–6r and 6u–6x showed antibacterial activity against Xac, with \(\hbox {EC}_{50}\) values ranging from 14.42 to 38.91 \(\upmu \)g/mL, which are better than that of bismerthiazol (39.86 \(\upmu \)g/mL). Based on the antibacterial activity against Xac, comparative molecular filed analysis and comparative molecular similarity index analysis models were generated to investigate the structure-activity relationship of title compounds against Xac. The analytical results indicated that the above models exhibited good predictive accuracy and could be used as practical tools for guiding the design and synthesis of more potent quinazoline derivatives containing a 1,3,4-oxadiazole moiety.     

The dynamic structure of <Emphasis Type="Italic">cis</Emphasis> and <Emphasis Type="Italic">trans</Emphasis> conformers of substituted phosphinous acids

The potential energy surfaces of bis-(trifluoromethyl)-phosphinous (III), diemthylphosphinous (IV), and bis-(pentafluorophenyl)-phosphinous (V) acids, the geometric parameters of the cis and trans conformers of these acids, and their P-O and O-H stretching vibration frequencies were calculated by the density functional theory method (PBE, 4Z). The potential energy surface sections corresponding to internal rotations about the P-O bonds were constructed, and dynamic problems for such a motion of the proton in a cyclic potential were solved by the Ritz method using a basis set of 100 trigonometric functions. According to calculations, the energy differences between the cis and trans conformers of acids III–V were of 4–7 kJ/mol, and the heights of potential barriers separating these conformers were of from 11 to 16 kJ/mol. In acids III and V, the cis, and, in IV, the trans conformer was stabler. At 298 K, only the ground vibrational states were populated for both rotamers of IV and V and the cis conformer of III. The special features of the potential of III were such that, at 298 K, the first excited vibrational level of its trans conformer was also noticeably populated.     

Role of critical fluctuations in the formation of a skyrmion lattice in MnSi

The region in the H–T phase diagram near the critical temperature (T _c ) of the cubic helicoidal MnSi magnet is comprehensively studied by small-angle neutron diffraction. Magnetic field H is applied along the [111] axis. The experimental geometry is chosen to simultaneously observe the following three different magnetic states of the system: (a) critical fluctuations of a spin spiral with randomly orientated wavevector k _f , (b) conical structure with k _c ∥ H, and (c) hexagonal skyrmion lattice with k_sk ⊥ H. Both states (conical structure, and skyrmion lattice) are shown to exist above critical temperature T _c = 29 K against the background of the critical fluctuations of a spin spiral. The conical lattice is present up to the temperatures where fluctuation correlation length ξ becomes comparable with pitch of spiral d _s . The skyrmion lattice is localized near T _c and is related to the fluctuations of a spiral with correlation length ξ ≈ 2d _s , and the propagation vector is normal to the field (k_sk ⊥ H). These spiral fluctuations are assumed to be the defects that stabilize the skyrmion lattice and promote its formation.     

A practical multi-step synthesis of ethyl N-functionalized $$\varvec{\upbeta }$$-amino benzimidazole acrylate derivatives as promising cytotoxic agents

A series of 16 new ethyl \(\upbeta \)-amino benzimidazole acrylate derivatives 12(a–p) with a (2E)-s-cis/trans conformation and bearing two points of diversity was designed and synthesized by using a multi-step strategy (reductive amination, deprotection in acidic media and transamination) in moderate to good yields from ethyl 3-dimethylamino-2-(1H-benzimidazol-2-yl)acrylate (5) and monosubstituted N-Boc diamines (7a,7b) as starting building blocks. Products 12 were evaluated for their in vitro cytotoxic potential against six selected human cell lines (Huh7-D12, Caco2, MDA-MB231, HCT116, PC3 and NCI-H727). Compounds 12a, 12e and 12l exhibited selective and micromolar antitumor activities against Huh7-D12 and Caco2 cell lines.     

Substituent Dependent Optical Properties of <Emphasis Type="Italic">p</Emphasis>-phenyl Substituted ethenyl-<Emphasis Type="Italic">E</Emphasis>-thiophenes

Various electron donor and acceptor substituted (NO₂, CN, Cl, H, OCH₃, NH₂) p-phenyl ethenyl-E- thiophenes (1–6) were synthesized and substituent dependent optical properties (dipole moment, transition dipole moment, oscillator strength, optical band gap, hyperpolarizability) were studied using Solvatochromism and Density functional theory. It is shown that thiophene acts as a weak electron donor in presence of an electron withdrawing p-phenyl substituent (NO₂, CN, Cl), whereas thiophene acts as a weak electron acceptor in presence of an electron donating p-phenyl substituent (OCH₃, NH₂). In comparison to ethenyl thiophene 4, the HOMO-LUMO energy band gap is decreased upon increasing the electron donating or electron withdrawing capacity of p-phenyl substituent. From the excited state dipole moment calculation, it is shown that the excited state is highly dipolar for nitro and amino compounds 1 and 6, whereas compounds 2–5 show a non-polar excited state. As compared to the ethenyl thiophene 4, the first hyperpolarizability (β) increases upon substitution either with a strong electron withdrawing or strong electron donating p-phenyl substituent. A large β value is found for p-nitro phenyl ethenyl-E-thiophene and p-amino phenyl ethenyl-E- thiophene. Overall, these studies provide useful information in understanding the optical properties of phenyl and heterocyclic based ethenyl systems.     

Formation of the incommensurate ordered phase in TaC<Subscript>y</Subscript> carbide

Structural neutron diffraction studies indicate that only one ordered phase arises after the disorder-order transition in nonstoichiometric cubic tantalum carbide TaC_y. This phase arises in the composition range y = 0.79–0.89 due to long-term annealing with a decrease in temperature from 1600 to 300 K. It is incommensurate in the [1–11]_B1 direction, but it is close to commensurate M₆C₅ structures (C2/m and P3₁ space groups) in mutual arrangement of atoms and vacancies in nonmetallic (1–11)_B1 planes. The disorder-order transition channel that is associated with the formation of the incommensurate superstructure in TaC_y carbide includes two arms k ₅ ⁽⁶⁾ ≈ 0.473b₂ and k ₅ ⁽⁵⁾ = ?k ₅ ⁽⁶⁾ of the {k₅} star and arms of the {k₄} and {k₃} stars. The translation period of the incommensurate phase in the [1–11]_B1 direction is 8.9–9.1 nm, which is larger than that in the commensurate phase M₆C₅ by a factor of about 18.     

Synthesis of first ever 4-quinolone-3-carboxylic acid-appended spirooxindole-pyrrolidine derivatives and their biological applications

A series of 4-quinolone-3-carboxylic acid-containing spirooxindole-pyrrolidine derivatives was synthesized via multicomponent 1,3-dipolar cycloaddition reactions of azomethine ylides with new (E)-4-oxo-6-(3-phenyl-acryloyl)-1,4-dihydroquinoline-3-carboxylic acids in good yields with high regioselectivity. The cycloadducts were characterized by analytical and spectral data including \(^{1}\hbox {H}\), \(^{13}\hbox {C}\), 2D NMR and mass spectroscopy. The structure of one of the compounds (8a) was investigated theoretically by computational techniques. DFT studies support the proposed mechanism for this cycloaddition reaction. Furthermore, antibacterial activities of the new compounds were evaluated against Gram-positive and Gram-negative bacterial strains. Compounds 8f, 8m and 8p showed potent inhibition activities against selected bacteria. The in vitro cytotoxicity of spirooxindole derivatives (8a–r) was evaluated against MCF-7 breast cancer cell line. Among the various compounds tested, compound 8f \((\hbox {IC}_{50} = 18.35~\upmu \hbox {M})\) showed significant cytotoxic activity compared to the standard drug doxorubicin \((\hbox {IC}_{50 }= 15.00~\upmu \hbox {M})\).     

Identification of a novel putative inhibitor of the <Emphasis Type="BoldItalic">Plasmodium falciparum</Emphasis> purine nucleoside phosphorylase: exploring the purine salvage pathway to design new antimalarial drugs

Malaria, a tropical parasitic disease caused by Plasmodium spp., continues to place a heavy social burden, with almost 200 million cases and more than 580,000 deaths per year. Plasmodium falciparum purine nucleoside phosphorylase (PfPNP) can be targeted for antimalarial drug design since its inhibition kills malaria parasites both in vitro and in vivo. Although the currently known inhibitors of PfPNP, immucillins, are orally available and of low toxicity to animals and humans, to the best of our knowledge, none of these compounds has entered clinical trials for the treatment of malaria. Using a pharmacophore-based virtual screening coupled to a consensual molecular docking approach, we identified 59 potential PfPNP inhibitors that are predicted to be orally absorbed in a Caco-2 cell model. Although most of these compounds are predicted to have high plasma protein binding levels, poor water solubility (except for compound 25) and CYP3A4 metabolic stability (except for 4, 7 and 8), four structures (4, 7, 8 and 25) remain as potential leads because of their plausible interaction with a specific hydrophobic pocket of PfPNP, which would confer them higher selectivity for PfPNP over human PNP. Additionally, both predicted Gibbs free energies for binding and molecular dynamics suggest that compound 4 may form a more stable complex with PfPNP than 5\(^{\prime }\)-methylthio-immucillin-H, a potent and selective inhibitor of PfPNP.     

Radiation of electromagnetic waves by a dipole in an external uniform electrostatic field

Exact solution for the electromagnetic field densities E and H of a dipole of uniformly accelerated point-charges with identical masses is discussed. It is shown that, for any fixed time t and a large distance R between the center of the dipole and the fieldpoint, |E| ~ R ^?4, |H| ~ R ^?5, while for large c|t| ~ R, |E| ~ |H| ~1/R as in spherical electromagnetic waves. Nevertheless, any irreversible radiation of electromagnetic waves is absent since the wave zone does not exist.     

Some exact solutions of the local induction equation for the motion of a vortex in a Bose–Einstein condensate with a Gaussian density profile

The dynamics of a vortex filament in a Bose–Einstein condensate whose equilibrium density in the reference frame rotating at the angular velocity Ω is Gaussian with the quadratic form r·D?r has been considered. It has been shown that the equation of motion of the filament in the local-induction approximation permits a class of exact solutions in the form R(β, t) = βM(t) + N(t) of a straight vortex, where β is the longitudinal parameter and is the time. The vortex slips over the surface of an ellipsoid, which follows from the conservation laws N · D?N=C ₁ and M · D?N=C ₀=0. The equation of the evolution of the tangential vector M(t) appears to be closed and has integrals of motion M ·D?M=C ₂ and (|M| ? M· G?Ω) = C, with the matrix G? = 2(I?TrD? ? D?)^?1. Crossing of the respective isosurfaces specifies trajectories in the phase space.     

Conventional and microwave-assisted synthesis of new indole-tethered benzimidazole-based 1,2,3-triazoles and evaluation of their antimycobacterial,antioxidant and antimicrobial activities

A new series of triheterocycles containing indole–benzimidazole-based 1,2,3-triazole hybrids have been synthesized in good yields via a microwave-assisted click reaction. All the compounds were characterized by IR, \(^{1}\hbox {H}\) NMR, \(^{13}\hbox {C}\) NMR and mass spectroscopy and were evaluated for their in vitro antitubercular activity against the Mycobacterium tuberculosis H37Rv strain. Compounds 4b, 4h and 4i displayed highly potent antitubercular activity with MIC 3.125–6.25 \(\upmu \hbox {g}/\hbox {mL}\). The antioxidant potential was evaluated using 2,2-diphenyl-1-picryl hydrazine and \(\hbox {H}_{2}\hbox {O}_{2}\) radical scavenging activity, and compounds 4e,4f and 4g showed excellent radical scavenging activity with \(\hbox {IC}_{50}\) values in the range of 08.50–10.05 \(\upmu \hbox {g}/\hbox {mL}\). Furthermore, the compounds were evaluated for antimicrobial activity against numerous bacterial and fungal strains, and compounds 4b, 4c and 4h were found to be the most promising potential antimicrobial molecules with MIC 3.125–6.25 \(\upmu \hbox {g}/\hbox {mL}\).     

Structure–activity relationship investigation of coumarin–chalcone hybrids with diverse side-chains as acetylcholinesterase and butyrylcholinesterase inhibitors

Chalcones containing tertiary amine side-chains have potent activity as acetylcholinesterase (AChE) inhibitors. However, the effects of the location of the tertiary amine groups as well as of other groups on AChE and butyrylcholinesterase (BChE) activity have not been reported. Here, we report the synthesis and testing of 36 new coumarin–chalcone hybrids (5d–7j, 9d–11f, 12k–13m) against AChE and BChE. The nature and position of the chalcone substituents had major effects on inhibitory activity as well as selectivity for AChE over BChE. Compounds with para-substituted chalcone fragments in which the substituents were choline-like had potent activity against AChE and poor activity against BChE, while ortho-substituted analogs exhibited an opposite effect. Replacement of the terminal amine groups by amide, alkyl or alkenyl groups abrogated activity. Compound 5e showed potent inhibitory activity \((\hbox {IC}_{50} = 0.15 \pm 0.01\, \upmu \hbox {mol}{/}\hbox {L}\)) and good selectivity for AChE over BChE (ratio 27.4), and a kinetic study showed that 5e exhibited mixed-type inhibition against AChE. Computational docking results indicate that 5e binds to Trp 279, Tyr334 and Trp 84 in AChE, but only to Trp 82 in BChE. Overall, the results show that coumarin–chalcone hybrids with choline-like side-chains have promising activity and selectivity against AChE and be promising therapeutic leads for Alzheimer’s disease.     

Effect of the intersite Coulomb interaction on chiral superconductivity at the noncollinear spin ordering

We investigate the effect of the intersite Coulomb interaction in a planar system with the triangular lattice on the structure of chiral order parameter Δ(p) in the phase of coexisting superconductivity and noncollinear 120° magnetic ordering. It has been established that the Coulomb correlations in this phase initiate the state where the quasi-momentum dependence Δ(p) can be presented as a superposition of the chiral invariants corresponding to the \({d_{{x^2} - {y^2}}} + i{d_{xy}}\) and p _x + ip _y symmetry types. It is demonstrated that the inclusion of the Coulomb interaction shifts the Δ(p) nodal point positions and, thereby, changes the conditions for a quantum topological transition.     

Synthesis,structural, and spectroscopic (FT-IR,NMR, and UV) Characterization of 1-(Cyclohexylmethyl)-2-(pyridin-2-yl)-1<Emphasis Type="Italic">H</Emphasis>-benzo[<Emphasis Type="Italic">d</Emphasis>]imidazole by experimental techniques and quantum chemical calculations

The title compound (II), 1-(cyclohexylmethyl)-2-(pyridin-2-yl)-1H-benzo[d]imidazole (C₁₉H₂₁N₃), was synthesized via N-alkylation of 2-(pyridin-2-yl)-1H-benzo[d]imidazole (I). Both compounds I and II were characterized by IR, NMR and UV-vis spectroscopy. Solid-state structure of compound II was determined by single-crystal X-ray diffraction technique. Furthermore, quantum chemical calculations employing density functional theory (DFT/B3LYP) method with the 6–311++G(d, p) basis set were performed for the theoretical characterization of the molecular and spectroscopic features of the compounds. Using the TD-DFT method, electronic absorption spectra of the compounds have been predicted at same level. When the obtained results were compared with the experimental findings, it is seen that theoretical results support the experimental data and a good agreement exists between them.     

Electronic structure and fluorescent properties of malononitrile-based merocyanines with positive and negative solvatochromism

The behavior of the positions and shapes of the fluorescence bands of di-, tetra-, and hexamethine merocyanine dyes with 3H-indolyliden (dyes 1–3) and benzoimidazolyliden (dyes 4–6) as electron-donating substituents and malononitrile as an electron-accepting substituent is studied by the method of moments in solvents of different polarity. The solvatofluorochromic shifts have been found to be smaller than the solvatochromic shifts not only for negatively solvatochromic merocyanines 4–6, but also for dyes 1–3 whose solvatochromism is positive. For dyes 4–6, cases of a change of the sign of solvatofluorochromism with respect to the sign of solvatochromism are revealed. These nontrivial effects are accounted for by transitions between the polyene and polymethine electronic structures of merocyanines in the fluorescence state S ₁ that occur with increasing medium polarity. In contrast to the absorption spectra of merocyanines 1–3, an increase in the chain length results in an increase in the vinylene shifts in the fluorescence spectra of these dyes, as well as in a decrease in the deviations and in the narrowing of the bands. This is explained by the fact that the electronic structure of these merocyanines in the S ₁ state is closer to that of the ideal polymethine (the cyanine limit) than in the S ₀ state. The fluorescence bands of merocyanines 4–6 are observed to be broader compared to the absorption bands. This broadening is caused by a change in the relation between intermolecular and vibronic interactions during absorption and emission of light. The interactions of these types have a decisive effect on the behavior of the Stokes shifts and fluorescence quantum yields of merocyanines 1–6.     

Spin-frustrated antiferromagnets based on <Emphasis Type="Italic">BEDT-TTF</Emphasis> and manganese dicyanamide complexes

The magnetic properties of new radical cation salts (BEDT-TTF)₂[CuMn(dca)₄] (I) and (BEDT-TTF)₂[Mn(dca)₃] (II) [where BEDT-TTF = bis(ethylenedithio)tetrathiafulvalene and dca = N(CN₂)] are investigated using superconducting quantum interference device (SQUID) magnetometry and electron paramagnetic resonance (EPR) spectroscopy. It is established that, at temperatures below 25 K, both salts are characterized by antiferromagnetic deviations from the paramagnetic behavior. The Weiss constants for compounds I and II are determined to be ?5 and ?10 K, respectively. The corresponding correlations in the structure of compound I are short-range correlations and do not lead to a change in the effective spin equal to 5/2. It is found that the widths of the EPR lines attributed to the BEDT-TTF conducting sublattice correlate with the widths of the EPR lines associated with the magnetic sublattice of the Mn(dca) ₃ ^? counterion in the structure of salt II. This correlation suggests that the antiferromagnetic ordering in the magnetic sublattice of compound II affects the spin-lattice relaxation in the BEDT-TTF sublattice. The dependence of the magnetic moment on the magnetic field for compound II at a temperature of 2 K is typical of weakly frustrated uniaxial antiferromagnets and exhibits a kink in a magnetic field of 20 kOe, which corresponds to spin-flop transitions.