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The bianthraquinonic biological pigments luteoskyrin and rugulosin and five polyhydroxyanthraquinone derivatives are studied by carbon-13 NMR in DMSO solution. Peak assignment for the fourteen carbon atoms of these compounds is achieved by proton spin decoupling and by investigating the effect of ionisation of the hydroxyl groups upon the carbon chemical shifts. Carbon chemical shifts in the planar hydroxyanthraquinones can be rationalised in terms of conjugation and intramolecular hydrogen bonding. The latter is responsible for the relative acidity of the hydroxyl groups in the analogues, and for the different conformations proposed for luteoskyrin and rugulosin. Tautomeric equilibria occur in DMSO and water–DMSO solutions for the anionic species [LS]2? and [RG]2?. This can account for the binding of luteoskyrin and rugulosin to nucleic acids.  相似文献   

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Using extensive Molecular Dynamics (MD) simulations we study the behavior of polyelectrolytes in poor solvents, where we take explicitely care of the counterions. The resulting pearl-necklace structures are subject to strong conformational fluctuations, only leading to small signatures in the form factor, which is a severe obstacle for experimental observations. In addition we study how the necklace collapses as a function of Bjerrum length. At last we demonstrate that the position of the first peak in the inter-chain structure factor varies with the monomer density close to for all densities. This is in strong contrast to polyelectrolyte solutions in good solvent.  相似文献   

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Solution-gel-crystal phase transitions in a polysaccharide-water-salt system were examined. Polysaccharide helices were shown to exhibit identical conformation in solutions, gels, and crystals containing up to 50 % of water.Translated fromIzvestiya Akademii Nauk. Seriya Khitnicheskaya, No. 6, pp. 1543–1546, June, 1996.  相似文献   

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Circular dichroism spectral and fluorescence decay methods have been employed to determine the conformations of mono[6-(p-tolylseleno)-6-deoxy]-β-CD(1), mono(6-anilino-6-deoxy) −β -CD (2) and mono[6-(L-tryptophan)-6-deoxy]−β -CD (3) in phosphate buffer solution (pH 7.2, 0.1 mol dm−3) at 298.15 K. The results indicate that compounds 2 and 3 formed self-inclusion complexes in aqueous buffer solution, while the substituent of compound 1 was not included into cyclodextrin cavity at all. Furthermore, the complex stability constant (logK s) and Gibbs free en-ergy change (−ΔAG °) of these three cylcodextrin derivatives with several cycloalkanols have been determined by circular dichroism spectral titration in phosphate buffer solution at 298.15 K. It is found that the location of the substituent affects the stability of host-guest complex in aqueous solution.  相似文献   

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Oxidation of 3b or 14c,d with Pb(OAc)4 in AcOH for 20 min at 25 degrees C and 1 h at 75 degrees C gave flavoskyrin-type dimers 6b and 15c,d in 53-86% yield. Heating a solution of 6b or 15c,d in pyridine under air for 1 h at 75-80 degrees C and then for 1-2 h at 110 degrees C afforded rugulosin-type dimers 10b and 17c,d in 61-88% yield. This two-step sequence provides a practical route to this unusual natural product skeleton.  相似文献   

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The structures of (+)rugulosin, (?)luteoskyrin and (?)rubroskyrin have been reexamined by NMR and new structures 18, 19 and 20 proposed respectively. Their absolute structures were established on the basis of the X-ray analysis of (+)dibromodehydrotetrahydrorugulosin (27). The minor analogous metabolites, (?)4a-oxyluteoskyrin (31) of P. islandicum and (+)4a-oxyrugulosin (32) of P. brunneum, have been formulated. On oxidation of (?)luteoskyrin and (+)rugulosin with pertrifluoroacetic acid (?)4a,4a′-dioxyluteoskyrin (33) and (+>4a,4a′-dioxyrugulosin (34) were formed, while with MnO2 (+)4a,4a′-dehydrorugulosin (35) was obtained. The structures of lumiluteoskyrin (37), and deoxylumiluteoskyrin (38), photooxidation products of luteoskyrin and deoxyluteoskyrin, respectively, have been elucidated.  相似文献   

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Molecular simulation of amphiphilic (AB)n star diblock copolymers in dilute solution shows that the properties of the polymer are significantly affected by which of the ends of the diblock arm is attached to the center of the star. In dilute aqueous solution, stars having the solvophilic end of the diblock attached to the center of the star can undergo a dramatic conformational change in which the outer solvophobic blocks aggregate into one or more compact solvophobic globules. This aggregation transition is accompanied by a significant change in the size of the polymer as measured by the radius of gyration.  相似文献   

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Cycloundecane (1) was shown to exist at -183.1 degrees C as a mixture of the [12323] (approximately 59%) and [335] (approximately 41%) conformations. Populations were determined from the (13)C NMR spectrum, and assignments were based on the (13)C spectra, calculated free energies and chemical shifts, and information from the literature, including X-ray studies of solid derivatives and calculated barriers.  相似文献   

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Reliable conformational energetics is essential in interpreting and predicting structures of molecular crystals. We provide a combined density functional theory (DFT)-structural database study, demonstrating that this combination can be used as a foundation for this purpose. A subtle problem of nitrogen pyramidalization is used as the example in antipyrines, a group of bioactive molecules. Nitrogen pyramidalization on the two adjacent sp(3) nitrogens directly affects the orientation of the methyl and phenyl substituents, which tend toward opposite sides of the heteroaromatic ring, affecting crystal packing. Accordingly, the overwhelming majority of the structures of antipyrines in the Cambridge Structural Database (CSD) are either nearly planar or have substituents on the opposite sides of the ring. Recent powder X-ray structures by Lemmerer et al. identified propyphenazone, an antipyrine, to have two substituents on the same side in an apparently sterically crowded conformation. We show that the new structure, although counterintuitive, is not an outlier on the conformational map. A distribution of the conformations of all antipyrines listed in the CSD is in good agreement with the computed conformational map. We also examine the role of the hysteretic property of the phenyl torsion in propyphenazone and its indirect effects on its overall conformation.  相似文献   

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Discussion of the history of biopolymers is focused on proteins and polypeptides. Rubber elasticity is discussed from the early days onward, when the first and second laws of thermodynamics were established. Insight in the elasticity of elastin, an amorphous protein occurring in ligaments and arteries, is followed against this background. Denatured proteins also fit in this category. At present, the random-coil state that underlies the elasticity is rather well understood as a result of the new methods of analyzing the dimensions in terms of the conformations of the residues. Subsequently, the discovery of the α-helix, as well as that of the other helical structures of DNA and collagen, is described. The conversion to random coils is followed with emphasis on our insight into the cooperative nature of the transition. Finally, the least understood globular proteins are considered. Major progress was made with the successful analysis of x-ray patterns. The native state is characterized by closely packed residues in complicated, but unique, patterns. The conversion to random coils (denaturation) is sharp, not unlike a phase transition. Although the native state is rather closely packed, some mobility still exists. The implication of this mobility for enzymatic action is hinted at.  相似文献   

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The literature concerning the structures of compounds containing saturated, 4-carbon rings is reviewed critically, and the variety of conformations (dihedral angles of 0° to 30° ± 6°) of the cyclobutane ring are tabulated and discussed.  相似文献   

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Abstract

A series of iminophosphoranes o-X-C6H4-N=PPh3, where X=H(I),Me (II),Et (III),OMe(IV),OEt(V) were investigated by means of dipole moments method. Because of an orientation of aromatic fragment determines intramolecular interactions in the system (benzene ring - double N=P bond), the problem of internal rotation of N-Car bond is important. DM (exp.) of molecules (I-V), determined in dioxane are 4.30(I), 4.34(II), 4.53(III), 4.75(IV), 4.79 D(V), respectively.  相似文献   

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Laulimalide is one of the newest naturally occurring macrolides known to act as a microtubule stabilizing agent with properties similar to Taxol. It also stands as being one of the most flexible with 18 rotatable bonds. This large number of rotatable bonds allows for approximately 3(18) potential conformers. To examine the conformational energy surface of laulimalide, we have performed an NAMFIS deconvolution analysis for laulimalide in DMSO-d6. The latter has been supplemented with a post-NAMFIS energy analysis at the Becke3LYP/6-31G level that examines the opposing effects of internal hydrogen bonding and syn-pentane interactions. In this way, we have identified 15 laulimalide conformations that can be classified into 5 different families: Supine, Convex, Cobra, Stretch, and Concave motifs.  相似文献   

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