Raman and infrared spectroscopy of selected vanadates

Raman and infrared spectroscopy has been used to study the structure of selected vanadates including pascoite, huemulite, barnesite, hewettite, metahewettite, hummerite. Pascoite, rauvite and huemulite are examples of simple salts involving the decavanadates anion (V10O28)6-. Decavanadate consists of four distinct VO6 units which are reflected in Raman bands at the higher wavenumbers. The Raman spectra of these minerals are characterised by two intense bands at 991 and 965 cm(-1). Four pascoite Raman bands are observed at 991, 965, 958 and 905 cm(-1) and originate from four distinct VO6 sites. The other minerals namely barnesite, hewettite, metahewettite and hummerite have similar layered structures to the decavanadates but are based upon (V5O14)3- units. Barnesite is characterised by a single Raman band at 1010 cm(-1), whilst hummerite has Raman bands at 999 and 962 cm(-1). The absence of four distinct bands indicates the overlap of the vibrational modes from two of the VO6 sites. Metarossite is characterised by a strong band at 953 cm(-1). These bands are assigned to nu1 symmetric stretching modes of (V6O16)2- units and terminal VO3 units. In the infrared spectra of these minerals, bands are observed in the 837-860 cm(-1) and in the 803-833 cm(-1) region. In some of the Raman spectra bands are observed for pascoite, hummerite and metahewettite in similar positions. These bands are assigned to nu3 antisymmetric stretching of (V10O28)6- units or (V5O14)3- units. Because of the complexity of the spectra in the low wavenumber region assignment of bands is difficult. Bands are observed in the 404-458 cm(-1) region and are assigned to the nu2 bending modes of (V10O28)6- units or (V5O14)3- units. Raman bands are observed in the 530-620 cm(-1) region and are assigned to the nu4 bending modes of (V10O28)6- units or (V5O14)3- units. The Raman spectra of the vanadates in the low wavenumber region are complex with multiple overlapping bands which are probably due to VO subunits and MO bonds.     

Raman properties of chlorophyll d, the major pigment of Acaryochloris marina: studies using both Raman spectroscopy and density functional theory

The Raman spectroscopy of purified chlorophyll (Chl) d extracted from Acaryochloris marina has been measured over the wide region of 250-3200 cm(-1) at 77 K following excitation of its Soret band at 488 nm and analyzed with the aid of hybrid density-functional vibrational analyses. A Raman peak specific to Chl d, which arises from the formyl group 3(1) C=O stretching, was clearly observed at 1659 cm(-1) with medium intensity. Peaks due to other C=O stretching vibrations of the 13(1) keto-, 13(3) ester- and 17(3) groups were also observed. Four very strong peaks were observed in the range of 1000-1600 cm(-1), assigned to the CC stretching and mixtures of the CH3 bend and CN stretching. CCC and NCC bending contribute to medium intensity peaks at 986 and 915 cm(-1). Out-of-plane CH bending at Chl d methine sites 10, 5 and 20 contribute to observed peaks at 885, 864 and 853 cm(-1), respectively. A few modes involving the MgN stretching and MgNC bending motions were observed in the very low frequency range. Density functional theory (DFT) calculations have been used to make assignments on the observed Raman spectrum and the DFT results have been found to be in good agreement with the experimental results.     

Molecular dynamics simulation of liquid methanol. II. Unified assignment of infrared, Raman, and sum frequency generation vibrational spectra in methyl C-H stretching region

Vibrational spectra of methyl C-H stretching region are notoriously complicated, and thus a theoretical method of systematic assignment is strongly called for in condensed phase. Here we develop a unified analysis method of the vibrational spectra, such as infrared (IR), polarized and depolarized Raman, and ssp polarized sum frequency generation (SFG), by flexible and polarizable molecular dynamics simulation. The molecular model for methanol has been developed by charge response kernel model to allow for analyzing the methyl C-H stretching vibrations. The complicated spectral structure by the Fermi resonance has been unraveled by empirically shifting potential parameters, which provides clear information on the coupling mechanism. The analysis confirmed that for the IR, polarized Raman, and SFG spectra, two-band structure at about 2830 and 2950 cm(-1) results from the Fermi resonance splitting of the methyl C-H symmetric stretching and bending overtones. In the IR spectrum, the latter, higher-frequency band is overlapped with prominent asymmetric C-H stretching bands. In the depolarized Raman spectrum, the high frequency band at about 2980 cm(-1) is assigned to the asymmetric C-H stretching mode. In the SFG spectrum, the two bands of the splitted symmetric C-H stretching mode have negative amplitudes of imaginary nonlinear susceptibility χ(2), while the higher-frequency band is partly cancelled by positive imaginary components of asymmetric C-H stretching modes.     

Raman spectroscopy of newberyite, hannayite and struvite

The phosphate minerals hannayite, newberyite and struvite have been studied by Raman spectroscopy using a thermal stage. Hannayite and newberyite are characterised by an intense band at around 980cm(-1) assigned to the v(1) symmetric stretching vibration of the HPO(4) units. In contrast the symmetric stretching mode is observed at 942cm(-1) for struvite. The Raman spectra are characterised by multiple v(3) anti-symmetric stretching bands and v(2) and v(4) bending modes indicating strong distortion of the HPO(4) and PO(4) units. Hannayite and newberyite are defined by bands at 3382 and 3350cm(-1) attributed to HOPO(3) vibrations and hannayite and struvite by bands at 2990, 2973 and 2874 assigned to NH(4)(+) bands. Raman spectroscopy has proven most useful for the analysis of these 'cave' minerals where complex paragenetic relationships exist between the minerals.     

Raman spectroscopy of the mineral rhodonite

The mineral rhodonite an orthosilicate has been characterised by Raman spectroscopy. The Raman spectra of three rhodonites from Broken Hill, Pachapaqui and Franklin were compared and found to be similar. The spectra are characterised by an intense band at around 1000 cm(-1) assigned to the nu(1) symmetric stretching mode and three bands at 989, 974 and 936 cm(-1) assigned to the nu(3) antisymmetric stretching modes of the SiO(4) units. An intense band at around 667 cm(-1) was assigned to the nu(4) bending mode and showed additional bands exhibiting loss of degeneracy of the SiO(4) units. The low wave number region of rhodonite is complex. A strong band at 421.9 cm(-1) is attributed to the nu(2) bending mode. The spectra of the three rhodonite mineral samples are similar but subtle differences are observed. It is proposed that these differences depend upon the cationic substitution of Mn by Ca and/or Fe(2+) and Mg.     

Raman spectroscopic studies on tropolone complexes with La, Nd, Sm, Yb

The complexes of tropolone (HL) with different lanthanide metals of lanthanum (La), neodymium (Nd), samarium (Sm), ytterbium (Yb) have been prepared respectively in the non-aqueous solution by the direct electrochemical oxidation of sacrificial metal anodes, and characterized by normal Raman spectroscopy. By comparing the spectra of the ligands and their complexes, the stretching vibrational band of OH disappeared in complexes, and the frequencies shifts of some relevant bands were observed, particularly for the stretching vibration of CO. In the low frequency region, new metal ion sensitive bands at 400-700 cm(-1) were observed, which could be assigned to the stretching vibrational mode of the bonding of lanthanide with oxygen. The stretching vibration of lanthanide-oxygen of tropolonate complexes showed a metal ion sensitivity. All the obvious change in spectral feature of Raman spectra revealed that CO and OH were coordinated with the center metal ions through oxygen atoms. Based on Raman results, the structures of the above complexes were proposed.     

Raman spectra of gas hydrates--differences and analogies to ice 1h and (gas saturated) water

It is generally accepted that Raman spectroscopic investigations of gas hydrates provide vital information regarding the structure of the hydrate, hydrate composition and cage occupancies, but most research is focused on the vibrational spectra of the guest molecules. We show that the shape and position of the Raman signals of the host molecules (H(2)O) also contain useful additional information. In this study, Raman spectra (200-4000 cm(-1)) of (mixed) gas hydrates with variable compositions and different structures are presented. The bands in the OH stretching region (3000-3800 cm(-1)), the O-H bending region (1600-1700 cm(-1)) and the O-O hydrogen bonded stretching region (100-400 cm(-1)) are compared with the corresponding bands in Raman spectra of ice Ih and liquid water. The interpretation of the differences and similarities with respect to the crystal structure and possible interactions between guest and host molecules are presented.     

Infrared and Raman spectra of 3,5-diamino-6-(o-C6H4X)-1,2,4-triazines [X = F,Cl, Br,CH3

Raman and infrared spectra of four substituted 3,5-diamino-6-(ortho-substituted phenyl)-1,2,4-triazines, having ortho-fluoro, -chloro, -bromo and -methyl groups on the phenyl ring, are reported and discussed. Bands due to substituent sensitive phenyl vibrations are observed in both the Raman and infrared spectra. The Raman spectra of all four compounds have strong bands near 770 and 1330 cm(-1) which are assigned to the ring breathing vibration of the 1,2,4-triazine ring and an asymmetric triazine C-NH2 stretching vibration, respectively. A medium/strong band near 800 cm(-1) in the infrared spectra is attributed to an out-of-plane bending vibration of the substituted 1,2,4-triazine ring.     

Raman and infrared spectroscopic study of the anhydrous carbonate minerals shortite and barytocalcite

The Raman spectra of shortite and barytocalcite complimented with infrared spectra have been used to characterise the structure of these carbonate minerals. The Raman spectrum of barytocalcite shows a single band at 1086cm(-1) attributed to the (CO(3))(2-) symmetric stretching mode, in contrast to shortite where two bands are observed. The observation of two bands for shortite confirms the concept of more than one crystallographically distinct carbonate unit in the unit cell. Multiple bands are observed for the antisymmetric stretching and bending region for these minerals proving that the carbonate unit is distorted in the structure of both shortite and barytocalcite.     

Towards a single crystal Raman spectrum of kaolinite at 77 K

The Raman spectra at 77 K of the hydroxyl stretching of kaolinite were obtained along the three axes perpendicular to the crystal faces. Raman bands were observed at 3616, 3658 and 3677 cm(-1) together with a distinct band observed at 3691 cm(-1) and a broad profile between 3695 and 3715 cm(-1). The band at 3616 cm(-1) is assigned to the inner hydroxyl. The bands at 3658 and 3677 cm(-1) are attributed to the out-of-phase vibrations of the inner surface hydroxyls. The Raman spectra of the in-phase vibrations of the inner-surface hydroxyl-stretching region are described in terms of transverse and longitudinal optic splitting. The band at 3691 cm(-1) is assigned to the transverse optic and the broad profile to the longitudinal optic mode. This splitting remained even at liquid nitrogen temperature. The transverse optic vibration may be curve resolved into two or three bands, which are attributed to different types of hydroxyl groups in the kaolinite.     

The infrared and Raman spectra of trans- and cis-tetrachloro-tetramethylbicyclopropylidene

The title compounds trans- and cis-2,2,2',2'-tetrachloro-3,3,3',3'-tetramethyl-bicyclopopylidene were synthesized, and their infrared and Raman spectra were recorded. Non-coincidence between the IR and Raman bands of the trans compound suggested C(2h) symmetry and a planar ring system. In the cis compound most of the IR and Raman bands coincided and a C(2v) symmetry seems likely. The exocyclic CC double bond gave rise to a medium/weak Raman band at 1,847 cm(-1) in the trans compound. In the cis derivative IR and Raman bands both at 1,825 cm(-1) were observed. From similarities with related molecules, the ring breathing, the antisymmetric ring stretch, the CCl(2) out-of-phase and in-phase stretch and the out-of-plane ring bending modes have been tentatively assigned for the trans and cis compounds.     

Density functional theory and Raman spectroscopy applied to structure and vibrational mode analysis of 1,1',3,3'-tetraethyl-5,5',6,6'-tetrachloro- benzimidazolocarbocyanine iodide and its aggregate

We have measured electronic and Raman scattering spectra of 1,1',3,3'-tetraethyl-5,5',6,6'-tetrachloro-benzimidazolocarbocyanine iodide (TTBC) in various environments, and we have calculated the ground state geometric and spectroscopic properties of the TTBC cation in the gas and solution phases (e.g., bond distances, bond angles, charge distributions, and Raman vibrational frequencies) using density functional theory. Our structure calculations have shown that the ground state equilibrium structure of a cis-conformer lies ～200 cm(-1) above that of a trans-conformer and both conformers have C(2) symmetry. Calculated electronic transitions indicate that the difference between the first transitions of the two conformers is about 130 cm(-1). Raman spectral assignments of monomeric- and aggregated-TTBC cations have been aided by density functional calculations at the same level of the theory. Vibrational mode analyses of the calculated Raman spectra reveal that the observed Raman bands above 700 cm(-1) are mainly associated with the in-plane deformation of the benzimidazolo moieties, while bands below 700 cm(-1) are associated with out-of-plane deformations of the benzimidazolo moieties. We have also found that for the nonresonance excited experimental Raman spectrum of aggregated-TTBC cation, the Raman bands in the higher-frequency region are enhanced compared with those in the nonresonance spectrum of the monomeric cation. For the experimental Raman spectrum of the aggregate under resonance excitation, however, we find new Raman features below 600 cm(-1), in addition to a significantly enhanced Raman peak at 671 cm(-1) that are associated with out-of-plane distortions. Also, time-dependent density functional theory calculations suggest that the experimentally observed electronic transition at ～515 nm (i.e., 2.41 eV) in the absorption spectrum of the monomeric-TTBC cation predominantly results from the π → π? transition. Calculations are further interpreted as indicating that the observed shoulder in the absorption spectrum of TTBC in methanol at 494 nm (i.e., 2.51 eV) likely results from the ν(") = 0 → ν' = 1 transition and is not due to another electronic transition of the trans-conformer-despite the fact that measured and calculated NMR results (not provided here) support the prospect that the shoulder might be attributable to the 0-0 band of the cis-conformer.     

Resonance Raman study of free-base tetraphenylporphine and its dication

Resonance Raman spectra of free-base tetraphenylporphine and its dication obtained with 441.6, 476.5, 488.0 and 514.5 nm excitation lines in the frequency region 100-1625 cm(-1) are reported. Some bands due to in-plane and out-of-plane vibrational modes, which are symmetry forbidden under ideal D(2h), are also seen in the Raman spectra of these molecules. These bands arise due to dynamic and/or static coupling of out-of-plane modes with the allowed in-plane modes. Dynamic coupling may be facilitated by the proton tunneling, while static coupling is due to out-of-plane distortion in the geometrical structure of the molecule. Shift in the positions for certain bands in the Raman spectra of dication are interpreted on the basis of electronic changes due to sharing of electrons of the B(1u) orbital by the two added protons.     

Raman spectroscopic study of the tellurite minerals: rajite and denningite

Tellurites may be subdivided according to formula and structure. There are five groups based upon the formulae (a) A(XO3), (b) A(XO3).xH2O, (c) A2(XO3)3.xH2O, (d) A2(X2O5) and (e) A(X3O8). Raman spectroscopy has been used to study rajite and denningite, examples of group (d). Minerals of the tellurite group are porous zeolite-like materials. Raman bands for rajite observed at 740, and 676 and 667 cm(-1) are attributed to the nu1 (Te2O5)(2-) symmetric stretching mode and the nu3 (TeO3)(2-) antisymmetric stretching modes, respectively. A second rajite mineral sample provided a more complex Raman spectrum with Raman bands at 754 and 731 cm(-1) assigned to the nu1 (Te2O5)(2-) symmetric stretching modes and two bands at 652 and 603 cm(-1) are accounted for by the nu3 (Te2O5)(2-) antisymmetric stretching mode. The Raman spectrum of dennigite displays an intense band at 734 cm(-1) attributed to the nu1 (Te2O5)(2-) symmetric stretching mode with a second Raman band at 674 cm(-1) assigned to the nu3 (Te2O5)(2-) antisymmetric stretching mode. Raman bands for rajite, observed at (346, 370) and 438 cm(-1) are assigned to the (Te2O5)(2-)nu2 (A1) bending mode and nu4 (E) bending modes.     

A Raman spectroscopic study of the uranyl sulphate mineral johannite

Raman spectroscopy at 298 and 77K has been used to study the secondary uranyl mineral johannite of formula (Cu(UO2)2(SO4)2(OH)2 x 8H2O). Four Raman bands are observed at 3593, 3523, 3387 and 3234cm(-1) and four infrared bands at 3589, 3518, 3389 and 3205cm(-1). The first two bands are assigned to OH- units (hydroxyls) and the second two bands to water units. Estimations of the hydrogen bond distances for these four bands are 3.35, 2.92, 2.79 and 2.70 A. A sharp intense band at 1042 cm(-1) is attributed to the (SO4)2- symmetric stretching vibration and the three Raman bands at 1147, 1100 and 1090cm(-1) to the (SO4)2- anti-symmetric stretching vibrations. The nu2 bending modes were at 469, 425 and 388 cm(-1) at 77K confirming the reduction in symmetry of the (SO4)2- units. At 77K two bands at 811 and 786 cm(-1) are attributed to the nu1 symmetric stretching modes of the (UO2)2+ units suggesting the non-equivalence of the UO bonds in the (UO2)2+ units. The band at 786cm(-1), however, may be related to water molecules libration modes. In the 77K Raman spectrum, bands are observed at 306, 282, 231 and 210cm(-1) with other low intensity bands found at 191, 170 and 149cm(-1). The two bands at 282 and 210 cm(-1) are attributed to the doubly degenerate nu2 bending vibration of the (UO2)2+ units. Raman spectroscopy can contribute significant knowledge in the study of uranyl minerals because of better band separation with significantly narrower bands, avoiding the complex spectral profiles as observed with infrared spectroscopy.     

Raman spectroscopy of potassium acetate-intercalated kaolinites at liquid nitrogen temperature

Raman microscopy has been used to study low and high defect kaolinites and their potassium acetate intercalated complexes at 298 and 77 K. Raman spectroscopy shows significant differences in the spectra of the hydroxyl-stretching region of the two types of kaolinites, which is also reflected in the spectroscopy of the hydroxyl-stretching region of the intercalation complexes. Additional bands to the normally observed kaolinite hydroxyl stretching frequencies are observed for the low and high defect kaolinites at 3605 and 3602 cm(-1) at 298 K. Upon cooling to liquid nitrogen temperature, these bands are observed at 3607 and 3604 cm(-1), thus indicating a weakening of the hydrogen bond formed between the inner surface hydroxyls and the acetate ion. Upon cooling to liquid nitrogen temperature, the frequency of the inner hydroxyls shifted to lower frequencies. Collection of Raman spectra at liquid nitrogen temperature did not give better band separation compared to the room temperature spectra as the bands increased in width and shifted closer together.     

Raman spectroscopic study of the tellurite minerals: carlfriesite and spiroffite

Raman spectroscopy has been used to study the tellurite minerals spiroffite and carlfriesite, which are minerals of formula type A(2)(X(3)O(8)) where A is Ca(2+) for the mineral carlfriesite and is Zn(2+) and Mn(2+) for the mineral spiroffite. Raman bands for spiroffite observed at 721 and 743 cm(-1), and 650 cm(-1) are attributed to the nu(1) (Te(3)O(8))(2-) symmetric stretching mode and the nu(3) (Te(3)O(8))(2-) antisymmetric stretching modes, respectively. A second spiroffite mineral sample provided a Raman spectrum with bands at 727 cm(-1) assigned to the nu(1) (Te(3)O(8))(2-) symmetric stretching modes and the band at 640cm(-1) accounted for by the nu(3) (Te(3)O(8))(2-) antisymmetric stretching mode. The Raman spectrum of carlfriesite showed an intense band at 721 cm(-1). Raman bands for spiroffite, observed at (346, 394) and 466 cm(-1) are assigned to the (Te(3)O(8))(2-)nu(2) (A(1)) bending mode and nu(4) (E) bending modes. The Raman spectroscopy of the minerals carlfriesite and spiroffite are difficult because of the presence of impurities and other diagenetically related tellurite minerals.     

A vibrational spectroscopic study of perhamite, an unusual silico-phosphate

The silico-phosphate mineral perhamite has been studied using a combination of electron and vibrational spectroscopy. SEM photomicrographs reveal that perhamite morphology consists of very thin intergrown platelets that can form a variety of habits. Infrared spectroscopy in the hydroxyl-stretching region shows a number of overlapping bands which are observed in the range 3581-3078 cm(-1). These wavenumbers enable an estimation to be made of the hydrogen bond distances in perhamite: 3.176(0), 2.880(5), 2.779(6), 2.749(3), 2.668(1) and 2.599(7)A. Intense Raman bands are observed in the region 1110-1130 and 966-996 cm(-1) and are assigned to the SiO(4) and PO(4) symmetric stretching modes. Other bands are observed in the range 1005-1096 cm(-1) and are attributed to the nu(3) antisymmetric bending modes of PO(4). Some low intensity bands around 874 cm(-1) were discovered and remain unclassified. Bands in the low-wavenumber region are assigned to the nu(4) and nu(2) out-of-plane bending modes of the OSiO and PO(4) units. Raman spectroscopy is a useful tool in determining the vibrational spectroscopy of mixed hydrated multi-anion minerals such as perhamite. Information on such a mineral would be difficult to obtain by other means.     

Raman microscopy of autunite minerals at liquid nitrogen temperature

Uranyl micas are based upon (UO(2)PO(4))(-) units in layered structures with hydrated counter cations between the interlayers. Uranyl micas also known as the autunite minerals are of general formula M(UO2)2(XO4)2 x 8-12H2O where M may be Ba, Ca, Cu, Fe(2+), Mg, Mn(2+) or 1/2(HA1) and X is As or P. The structures of these minerals have been studied using Raman microscopy at 298 and 77K. Six hydroxyl stretching bands are observed of which three are highly polarised. The hydroxyl stretching vibrations are related to the strength of hydrogen bonding of the water OH units. Bands in the Raman spectrum of autunite at 998, 842 and 820 cm(-1) are highly polarised. Low intensity band at 915 cm(-1) is attributed to the nu(3) antisymmetric stretching vibration of (UO(2))(2+) units. The band at 820 cm(-1) is attributed to the nu(1) symmetric stretching mode of the (UO(2))(2+) units. The (UO(2))(2+) bending modes are found at 295 and 222 m(-1). The presence of phosphate and arsenate anions and their isomorphic substitution are readily determined by Raman spectroscopy. The collection of Raman spectra at 77K enables excellent band separation.     

Coherent Raman spectra of the nu1 mode of carbon suboxide

High-resolution (0.001 cm(-1)) coherent anti-Stokes Raman spectroscopy (CARS) has been used to study the nu1 symmetric CO stretching mode of the quasi-linear molecule carbon suboxide, C3O2. Q-branch transitions are seen that originate from the ground state and from thermally populated levels of the nu7 CCC bending mode, which is of unusually low frequency. The intensity variation of the Q-branch features on cooling to about 120 K in a jet expansion requires the reversal of the order of assignment given in a previous Raman study at low resolution. The identification of the nu1 sigma(g)+ <-- sigma(g)+ transition from the ground state is confirmed by the absence of J(odd) Q-branch lines in the resolved CARS spectrum. Analysis of this band in terms of a quasi-linear model gives a good fit to the observed transitions and leads to vibrational-rotational parameters (in cm(-1)) of nu1 = 2199.9773(12) and (B' - B') = -2.044(6) x 10(-4). Other transitions originating from higher nu7 levels occur at only slightly lower wavenumber values and permit the calculation of the double minimum potential in the Q7 bending coordinate. The results indicate that the ground-state barrier to linearity (21.5 cm(-1)) increases by only 0.6 cm(-1) when the CO symmetric stretch is excited.