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1.
Density functional method B3LYP plus the AUG‐cc‐pVDZ and AUG‐cc‐pVTZ basis sets is used to investigate ring normal modes of halogen‐substituted pyridines involved in the N ··· H? X H‐bonds with HX (X = F, Cl). The results demonstrated that the formation of hydrogen bond leads to an increase in the frequencies of the ring breathing mode v1, the N‐para‐C stretching mode v6a and the meta‐CC stretching mode v8a, whereas there is no change in the triangle mode v12 for free pyridine and a smaller blue shift for substituted pyridines. There is a strong coupling between the C? Y stretching vibration and the triangle mode (ortho‐ and para‐substituted) or the breathing mode (meta‐substituted) in substituted pyridines, which leads to the frequency decrease in the triangle or breathing modes. The natural bond orbital analysis suggests that electrostatic interaction and charge transfer caused by the intermolecular and intramolecular hyperconjugations are the origin of the frequency blue shift in the ring stretching modes. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012  相似文献   

2.
We use a variant of the focal point analysis to refine estimates of the relative energies of the four low‐energy torsional conformers of glycolaldehyde. The most stable form is the cis‐cis structure which enjoys a degree of H‐bonding from hydroxyl H to carbonyl O; here dihedral angles τ1 (O?C? C? O) and τ2 (C? C? O? H) both are zero. We optimized structures in both CCSD(T)/aug‐cc‐pVDZ and aug‐cc‐pVTZ; the structures agree within 0.01 Å for bond lengths and 1.0 degrees for valence angles, but the larger basis brings the rotational constants closer to experimental values. According to our extrapolation of CCSD(T) energies evaluated in basis sets ranging to aug‐cc‐pVQZ the trans‐trans form (180°, 180°) has a relative energy of 12.6 kJ/mol. The trans‐gauche conformer (160°, ±75°) is situated at 13.9 kJ/mol and the cis‐trans form (0°, 180°) at 18.9 kJ/mol. Values are corrected for zero point vibrational energy by MP2/aug‐cc‐pVTZ frequencies. Modeling the vibrational spectra is best accomplished by MP2/aug‐cc‐pVTZ with anharmonic corrections. We compute the Watsonian parameters that define the theoretical vibrational‐rotational spectra for the four stable conformers, to assist the search for these species in the interstellar medium. Six transition states are located by G4 and CBS‐QB3 methods as well as extrapolation using energies for structures optimized in CCSD(T)/aug‐cc‐pVDZ structures. We use two isodesmic reactions with two well‐established thermochemical computational schemes G4 and CBS‐QB3 to estimate energy enthalpy and Gibbs energy of formation as well as the entropy of the gas phase system. Our extrapolated electronic energies of species appearing in the isodesmic reactions produce independent values of thermodynamic quantities consistent with G4 and CBS‐QB3. © 2013 Wiley Periodicals, Inc.  相似文献   

3.
The conventional strain energies for azetidine and phosphetane are determined within the isodesmic, homodesmotic, and hyperhomodesmotic models. Optimum equilibrium geometries, harmonic vibrational frequencies, and corresponding electronic energies and zero‐point vibrational energies are computed for all pertinent molecular systems using self‐consistent field theory, second‐order perturbation theory, and density functional theory and using the correlation consistent basis sets cc‐pVDZ, cc‐pVTZ, and cc‐pVQZ. Single point fourth‐order perturbation theory, CCSD, and CCSD(T) calculations using the cc‐pVTZ and the cc‐pVQZ basis sets are computed using the MP2/cc‐pVTZ and MP2/cc‐pVQZ optimized geometries, respectively, to ascertain the contribution of higher order correlation effects and to determine if the quadruple‐zeta valence basis set is needed when higher order correlation is included. In the density functional theory study, eight different functionals are used including B3LYP, wB97XD, and M06‐2X to determine if any functional can yield results similar to those obtained at the CCSD(T) level. © 2012 Wiley Periodicals, Inc.  相似文献   

4.
The CCSD(T) interaction energies for the H‐bonded and stacked structures of the uracil dimer are determined at the aug‐cc‐pVDZ and aug‐cc‐pVTZ levels. On the basis of these calculations we can construct the CCSD(T) interaction energies at the complete basis set (CBS) limit. The most accurate energies, based either on direct extrapolation of the CCSD(T) correlation energies obtained with the aug‐cc‐pVDZ and aug‐cc‐pVTZ basis sets or on the sum of extrapolated MP2 interaction energies (from aug‐cc‐pVTZ and aug‐cc‐pVQZ basis sets) and extrapolated ΔCCSD(T) correction terms [difference between CCSD(T) and MP2 interaction energies] differ only slightly, which demonstrates the reliability and robustness of both techniques. The latter values, which represent new standards for the H‐bonding and stacking structures of the uracil dimer, differ from the previously published data for the S22 set by a small amount. This suggests that interaction energies of the S22 set are generated with chemical accuracy. The most accurate CCSD(T)/CBS interaction energies are compared with interaction energies obtained from various computational procedures, namely the SCS–MP2 (SCS: spin‐component‐scaled), SCS(MI)–MP2 (MI: molecular interaction), MP3, dispersion‐augmented DFT (DFT–D), M06–2X, and DFT–SAPT (SAPT: symmetry‐adapted perturbation theory) methods. Among these techniques, the best results are obtained with the SCS(MI)–MP2 method. Remarkably good binding energies are also obtained with the DFT–SAPT method. Both DFT techniques tested yield similarly good interaction energies. The large magnitude of the stacking energy for the uracil dimer, compared to that of the benzene dimer, is explained by attractive electrostatic interactions present in the stacked uracil dimer. These interactions force both subsystems to approach each other and the dispersion energy benefits from a shorter intersystem separation.  相似文献   

5.
The O···H? O and Cl···H? O hydrogen bonding interactions were analyzed for HOCl dimers by using B3LYP, MP2, CCSD, and MP4(SDTQ) methods in conjunction with the various basis sets. Five isomers were found for the HOCl dimer. The ZPE and BSSE corrected binding energies were computed at the different levels of theory. At the optimized geometries obtained at CCSD/AUG‐cc‐pVDZ level, energies were re‐evaluated at MP4(SDTQ)/AUG‐cc‐pVTZ and CCSD(T)/cc‐pVTZ levels of theory. We found an average of ?20.9 and ?9.6 kJ/mol for the strength of the O···H and Cl···H hydrogen bonding interactions, respectively. Excitation and vertical ionization energies as well as rotational constants were computed at different levels of theory. The quantum theory of atoms in molecules (QTAIM) and natural bond orbital (NBO) analysis were used to elucidate the nature of the interactions of HOCl dimers. The interaction energies were decomposed by Morokuma methodology. We have computed ΔfH°(HOCl) and ΔfH°(HOCl+) using the atomization reactions. The Δf298(HOCl) values are ?17.85 and ?18.05 kcal/mol by using CBS‐Q and CBS‐QB3 extrapolation models, respectively, in good agreement with the results given in JANAF tables. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010  相似文献   

6.
In this study, 12 bound complexes were selected to construct a database for testing 15 dispersion‐improved exchange‐correlation (XC) functionals, including hybrid generalized gradient approximation (GGA), modified using the Grimme's pairwise strategy, and double hybrid XC functionals, for specifically characterizing the CO2 binding by alcoholamines. Bound complexes were selected based on the characteristics of their hydrogen bonds, dispersion, and electrostatic (particularly between the positive charge of CO2 and the lone pair of N of alcoholamines) interactions. The extrapolated binding energy from the aug‐cc‐pVTZ (ATZ) to aug‐cc‐pVQZ (AQZ) basis set at the CCSD(T)/CBS(MP2+DZ) level was used as the reference for the XC functional comparison. M06‐2X produced the optimal agreement if the optimized geometries at MP2/ATZ level were chosen for all the test bound complexes. However, M06‐L, ωB97X, and ωB97, and were preferred if the corresponding density functional theory (DFT) optimized geometries were adapted for the benchmark. Simple bimolecular reaction between CO2 and monoethanolamine simulated using polarizable continuum solvation model confirmed that ωB97, ωB97X, and ωB97XD qualitatively reproduced the energetics of MP2 level. The inconsistent performance of the tested XC functionals, observed when using MP2 or DFT optimized geometries, raised concerns regarding using the single‐point ab initio correction combined with DFT optimized geometry, particularly for determining the nucleophilic attack by alcoholamines to CO2. © 2014 Wiley Periodicals, Inc.  相似文献   

7.
Through the use of ab initio theoretical models based on MP2/aug‐cc‐pVDZ‐optimized geometries and CCSD(T)/aug‐cc‐pVTZ and CCSD(T)/aug‐c‐pVDZ total energies, it has been shown that the significant electron density rearrangements that follow the formation of a beryllium bond may lead to the appearance of a σ‐hole in systems that previously do not exhibit this feature, such as CH3OF, NO2F, NO3F, and other fluorine‐containing systems. The creation of the σ‐hole is another manifestation of the bond activation–reinforcement (BAR) rule. The appearance of a σ‐hole on the F atoms of CH3OF is due to the enhancement of the electronegativity of the O atom that participates in the beryllium bond. This atom recovers part of the charge transferred to Be by polarizing the valence density of the F into the bonding region. An analysis of the electron density shows that indeed this bond becomes reinforced, but the F atom becomes more electron deficient with the appearance of the σ‐hole. Importantly, similar effects are also observed even when the atom participating in the beryllium bond is not directly attached to the F atom, as in NO2F, NO3F, or NCF. Hence, whereas the isolated CH3OF, NO2F, and NO3F are unable to yield F ??? Base halogen bonds, their complexes with BeX2 derivatives are able to yield such bonds. Significant cooperative effects between the new halogen bond and the beryllium bond reinforce the strength of both noncovalent interactions.  相似文献   

8.
9.
应用B3LYP方法,结合6-31G**、cc-pVDZ、aug-cc-pVDZ和cc-pVTZ基组对硫代乙酸的两种异构体CH3C(O)SH和CH3C(S)OH在基态势能面上的9个单分子反应进行了研究。本文计算预测硫代乙酸主要以CH3C(O)SH的形式存在,两种异构体均以顺式构象为优势构象。通过对比CH3C(O)SH、CH3C(S)OH和 CH3C(O)OH的反应性差异,我们可以得出结论:CH3C(O)OH中-OH基团的O被S取代后,只有当-SH作为一个整体参加反应时才对分子解离过程有较大影响;而C=O或C=S对反应性影响较小。  相似文献   

10.
The rate constants of the H‐abstraction reactions from cyclopropane by H, O (3P), Cl (2P3/2), and OH radicals have been calculated over the temperature range of 250?2500 K using two different levels of theory. Calculations of optimized geometrical parameters and vibrational frequencies are performed using the MP2 method combined with the cc‐pVTZ basis set and the 6–311++G(d,p) basis set. Single‐point energy calculations have been carried out with the highly correlated ab initio coupled cluster method in the space of single, double, and triple (perturbatively) electron excitations CCSD(T) using either the cc‐pVTZ, aug‐cc‐pVTZ, and aug‐cc‐pVQZ basis sets or the 6–311++G(3df,3pd) basis set. The CCSD(T) calculated potential energies have been extrapolated to the complete basis limit (CBS) limit. The Full Configuration Interaction (FCI) energies have been also estimated using the continued‐fraction approximation as proposed by Goodson (J. Chem. Phys., 2002, 116, 6948–6956). Canonical transition‐state theory combined with an Eckart tunneling correction has been used to predict the rate constants as a function of temperature using two kinetic models (direct abstraction or complex mechanism) at two levels of theory (CCSD(T)‐cf/CBS//MP2/cc‐pVTZ and CCSD(T)‐cf/6–311++G(3df,3pd)//MP2/6–311++G(d,p)). The calculated kinetic parameters are in reasonable agreement with their literature counterparts for all reactions. In the light of these trends, the use of the Pople‐style basis sets for studying the reactivity of other systems such as larger cycloalkanes or halogenated cycloalkanes is recommended because the 6–311++G(3df,3pd) basis set is less time consuming than the aug‐cc‐pVQZ basis set. Based on our calculations performed at the CCSD(T)‐cf/CBS//MP2/cc‐pVTZ level of theory, the standard enthalpy of formation at 298 K for the cyclopropyl radical has been reassessed and its value is (290.5 ± 1.6) kJ mol?1.  相似文献   

11.
In this work, three forms (cis, trans and nonplanar) of ClOBrO and BrOClO were optimized at CCSD(T)/cc‐pVTZ level of theory. At the most stable forms (nonplanar form) of ClOBrO and BrOClO, the vertical excitation energies for the lowest six singlet states and two triplet states were calculated at the multireference internally contracted configuration interaction (MRCI) level of theory using cc‐pVDZ, Aug‐cc‐pVDZ, cc‐pVTZ, and Aug‐cc‐pVTZ basis sets. The scalar relativistic effect on the excited states of BrOClO and ClOBrO were estimated. In addition, the potential energy curves of the lowest six singlet states and two triplet states of BrOClO and ClOBrO, as well as BrOOCl were calculated at both MCSCF (complete active space self‐consistent field) and MRCI levels of theory using Aug‐cc‐pVDZ basis set on the active space (18e,12o) along the distances of BrO? ClO, ClO? BrO, and BrO? OCl. The results were compared among BrOOCl, ClOBrO, and BrOClO. The first singlet excited state of BrOOCl is 1.12 eV higher than that of BrOClO and 1.36 eV higher than that of ClOBrO at MRCI/cc‐pVTZ level of theory. The first triplet excited state of BrOOCl is 0.77 eV higher than that of BrOClO and 0.86 eV higher than that of ClOBrO at MRCI/cc‐pVTZ level of theory. Most of the excited states of BrOClO studied in this work are unbound states; but most of the ClOBrO and BrOOCl excited states studied in this work are weakly bound states at MRCI level of theory. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009  相似文献   

12.
For the first time the argon‐matrix low‐temperature FTIR spectra of β‐alanine are recorded. They reveal a quite complicated spectral pattern which suggests the presence of several β‐alanine conformers in the matrix. To interpret the spectra, the eighteen β‐alanine conformers, stable in the gas phase, are estimated at the B3LYP and MP2 levels combined with the aug‐cc‐pVDZ. Ten low‐energy structures are reoptimized at the QCISD/aug‐cc‐pVDZ and B3LYP and MP2 levels by using the aug‐cc‐pVTZ basis sets. Assignment of the experimental spectra is undertaken on the basis of the calculated B3LYP/aug‐cc‐pVDZ anharmonic IR frequencies as well as careful estimation of the conformer population. The presence of at least three β‐alanine conformers is demonstrated. The detailed analysis of IR spectra points to the possible presence of five additional β‐alanine conformers.  相似文献   

13.
We report a theoretical study on non‐conventional structures of 1:1 complexes between carbon dioxide and carbonyl compounds. These structures have never been reported before but are relevant for understanding the solubility of carbonyl compounds in supercritical CO2. The work is based on the results of ab initio calculations at the MP2 and CCSD(T) levels using aug‐cc‐pVDZ and aug‐cc‐pVTZ basis sets. Investigated systems include aldehydes, ketones and esters, together with some fluorinated derivatives. The results are interpreted in terms of natural bond orbital analyses. Harmonic vibrational frequency calculations have also been done in order to compare them with available experimental data. We show for the first time that complexes where CO2 behaves globally as a Lewis base are stable in the case of ketones and esters, but not in the case of aldehydes, and their stability is similar to that of traditional complexes in which CO2 behaves as a Lewis acid. This finding considerably modifies the concept of CO2‐philicity and may have important ramifications in the development of green reactions in supercritical CO2.  相似文献   

14.
A linear correlation between isotropic nuclear magnetic shielding constants for seven model molecules (CH2O, H2O, HF, F2, HCN, SiH4 and H2S) calculated with 37 methods (34 density functionals, RHF, MP2 and CCSD(T)), with affordable pcS‐2 basis set and corresponding complete basis set results, estimated from calculations with the family of polarization‐consistent pcS‐n basis sets is reported. This dependence was also supported by inspection of profiles of deviation between CBS estimated nuclear shieldings and shieldings obtained with the significantly smaller basis sets pcS‐2 and aug‐cc‐pVTZ‐J for the selected set of 37 calculation methods. It was possible to formulate a practical approach of estimating the values of isotropic nuclear magnetic shielding constants at the CCSD(T)/CBS and MP2/CBS levels from affordable CCSD(T)/pcS‐2, MP2/pcS‐2 and DFT/CBS calculations with pcS‐n basis sets. The proposed method leads to a fairly accurate estimation of nuclear magnetic shieldings and considerable saving of computational efforts. Copyright © 2013 John Wiley & Sons, Ltd.  相似文献   

15.
The reaction of propargyl alcohol with hydroxyl radical has been studied extensively at CCSD(T)/aug‐cc‐pVTZ//MP2/cc‐pVTZ level. This is the first time to gain a conclusive insight into the reaction mechanism and kinetics for this important reaction in detail. Two reaction mechanisms were revealed, namely addition/elimination and hydrogen abstraction mechanism. The reaction mechanism confirms that OH addition to C?C triple bond forms the chemically activated adducts, IM1 (·CHCOHCH2OH) and IM2 (CHOH·CCH2OH), and the hydrogen abstraction pathways (? CH2OH bonded to the carbon atom and alcohol hydrogen) may occur via low barriers. Harmonic model of Rice–Ramsperger–Kassel–Marcus theory and variational transition state theory are used to calculate the overall and individual rate constants over a wide range of temperatures and pressures. The calculated rate constants are in good agreement with the experimental data. At atmospheric pressure with Ar as bath gas, IM1 (·CHCOHCH2OH) and IM2 (CHOH·CCH2OH) formed by collisional stabilization are dominant in the low temperature range. The production of CHCCHOH + H2O via hydrogen abstraction becomes dominate at higher temperature. The fraction of IM3 (CH2COHCH2·O) is very significant over the moderate temperature range. © 2014 Wiley Periodicals, Inc.  相似文献   

16.
The intermolecular potential energy surface (PES) of argon with ethane has been studied by ab initio calculations at the levels of second‐order Møller–Plesset perturbation (MP2) theory and coupled‐cluster theory with single, double, and noniterative triple configurations (CCSD(T)) using a series of augmented correlation‐consistent basis sets. Two sets of bond functions, bf1 (3s3p2d) and bf2 (6s6p4d2f), have been added to the basis sets to show a dramatic and systematic improvement in the convergence of the entire PES. The PES of Ar–ethane is characterized by a global minimum at a near T‐shaped configuration with a well depth of 0.611 kcal mol?1, a second minimum at a collinear configuration with a well depth of 0.456 kcal mol?1, and a saddle point connecting the two minima. It is shown that an augmented correlation‐consistent basis set with a set of bond functions, either bf1 or bf2, can effectively produce results equivalent to the next larger augmented correlation‐consistent basis set, that is, aug‐cc‐pVDZ‐bf1 ≈ aug‐cc‐pVTZ, aug‐cc‐pVTZ‐bf1 ≈ aug‐cc‐pVQZ. Very importantly, the use of bond functions improves the PES globally, resulting accurate potential anisotropy. Finally, MP2 method is inadequate for accurate calculations, because it gives a potentially overestimated well depth and, more seriously, a poor potential anisotropy. © 2012 Wiley Periodicals, Inc.  相似文献   

17.
Isotropic nuclear shielding constants at the equilibrium molecular structure σeq and zero‐point vibrational corrections (ZPVCs) to σeq are evaluated using the B3LYP/aug‐cc‐pVTZ level of theory, as well as the KT2/aug‐cc‐pVTZ level of theory. Various scaling factors and systematic corrections are obtained by linear regression to experimental shielding constants. Comparisons of the scaled and systematically corrected equilibrium and vibrationally averaged shielding constants reveal that, at the 99% confidence level, the ZPVCs via second‐order perturbation theory do not improve the agreement of B3LYP/aug‐cc‐pVTZ and KT2/aug‐cc‐pVTZ calculated shielding constants with experiment. This holds true when the same analysis is applied to CCSD(T)/aug‐cc‐pCV[TQ]Z calculated σeq of Teale et al. [Journal of Chemical Physics 2013, 138, 024111]. In addition, at the 99% confidence level, B3LYP/aug‐cc‐pVTZ and KT2/aug‐cc‐pVTZ scaled and systematically corrected shielding constants are found to be statistically no different from CCSD(T)/aug‐cc‐pCV[TQ]Z calculated σeq. The use of scaling factors and systematic corrections could thus provide a cheaper but yet reasonably accurate alternative for the study of nuclear shielding constants of larger systems.  相似文献   

18.
The mechanism and dynamics of the H + CD4 → CD3 + HD (I) and H + CH4 → CH3 + H2 (II) reactions have been investigated by electronic structure methods. The minimum‐energy path and vibrational frequencies along the intrinsic reaction coordinate are calculated at MP2/cc‐pVDZ level. Energy distributions of the products are also obtained by the direct classical trajectory calculations at the MP2/ cc‐pVDZ level. It is found that most of the available energy appears as product translational energy, and very little of the available energy is partitioned into internal excitation of the HD (H2) product for reaction I (II), which is in agreement with the experimental evidence. The results indicate that the experimental results could be reproduced by the direct MP2 molecular dynamics calculations. The rotational state distributions of the products show the HD (H2) products are formed with lower rotational quantum numbers than the CD3 (CH3) products. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011  相似文献   

19.
The computational investigations are carried out on heterodimers containing sulfur tetroxide (SO4(C2V)) with the nitrous oxide (NNO) through MP2/cc–pVDZ and MP2/aug–cc–pVTZ//MP2/cc–pVDZ levels. Eight heterodimers are located on the potential energy surface of SO4(C2V)–NNO system. Binding energies of heterodimers in the SO4(C2V)–NNO system corrected with BSSE and ZPE are in the range of 1.17–7.90 kJ/mol. The calculated results reveal that the individual interaction of NNO terminal nitrogen atom with one of oxygen atoms of OSO ring in the SO4(C2V) monomer leads to the formation of the more stable heterodimer of SO4(C2V)–NNO system. The atoms in molecules theory were applied to analyze the nature of intermolecular interactions.  相似文献   

20.
A detailed investigation of the accuracy of different quantum mechanical methods for the study of iron(III) spin crossover complexes is presented. The energy spin state gap between the high and low spin states; ΔE (HS‐LS) of nine iron(III) quinolylsalicylaldiminate complexes were calculated with nine different DFT functionals, then compared. DFT functionals: B3LYP, B3LYP‐D3, B3LYP*, BH&HLYP, BP86, OLYP, OPBE, M06L, and TPSSh were tested with six basis sets: 3‐21G*, dgdzvp, 6‐31G**, cc‐pVDZ, Def2TZVP, and cc‐pVTZ. The cations from the X‐ray crystal structures of [Fe(qsal‐OMe)2]Cl·MeCN·H2O, [Fe(qsal‐OMe)2]Cl·2MeOH·0.5H2O, [Fe(qsal‐OMe)2]BF4·MeOH, [Fe(qsal‐OMe)2]NCS·CH2Cl2, [Fe(qsal‐F)2]NCS, [Fe(qsal‐Cl)2]NCS·MeOH, [Fe(qsal‐Br)2]NCS·MeOH, [Fe(qsal‐I)2]OTf·MeOH, and [Fe(qsal)2]NCS?CH2Cl2 were used as starting structures. The results show that B3LYP, B3LYP‐D3, OLYP, and OPBE with a 6‐31G**, Def2TZVP, and cc‐pVTZ basis set give reasonable results of ΔE (HS‐LS) compared with the experimental data. The enthalpy of [Fe(qsal‐I)2]+ calculated with an OLYP functional and cc‐pVTZ basis set (1.48 kcal/mol) most closely matches the experimental data (1.34 kcal/mol). B3LYP* yields an enthalpy of 5.92 kcal/mol suggesting it may be unsuitable for these Fe(III) complexes, mirroring recent results by Kepp (Inorg . Chem ., 2016, 55 , 2717–2727).  相似文献   

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