Synthesis of the C5-C9 Fragment of the Polypropionate Unit of the Geodiamolides and Jaspamide

An alternative stereoselective approach to the C₅C₉ fragment of the polypropionate unit of the geodiamolide and jaspamide is described.     

Ascorbigen A—NMR identification

The connectivities of all atoms in ascorbigen A, an important metabolite, were determined unambiguously for the first time. The connectivity between carbon atoms was established by 2D INADEQUATE, and one-bond ¹³C–¹³C coupling constants were determined for all pairs of directly connected carbon atoms except for two strongly coupled carbon pairs. The ¹³C–¹³C coupling in one of the pairs was proved by a modification of standard INADEQUATE; however, the signals from the other pair were too weak to be observed. The connectivity within the two strongly coupled C–C pairs was confirmed by a combination of COSY and gHSQC; the latter experiment also identified all C–H bonds. The proton nuclear magnetic resonance (¹H NMR) spectra in dry dimethyl sulfoxide allowed identification and assignment of the signals due to NH and OH protons. The derived structure, 3-((1H-indol-3-yl)methyl)-3,3a,6-trihydroxytetrahydrofuro[3,2-b]furan-2(5H)-one, agrees with the structure suggested for ascorbigen A in 1966. The density functional theory (DFT) calculations showed that among 16 possible stereoisomers, only two complied with the almost zero value of the measured ³J(H6–H6a). Of the two stereoisomers, 3S,3aS,6S,6aR and 3R,3aR,6R,6aS, the latter was excluded on synthetic grounds. The nuclear Overhauser effect measurements unveiled close proximity between H2′ proton of the indole and the H6a proton of the tetrahydrofuro[3,2-b]furan part. Detailed structural interpretation of the measured NMR parameters by means of DFT NMR was hampered by rotational flexibility of the indole and tetrahydrofuro[3,2-b]furan parts and inadequacy of Polarizable Continuum Model (PCM) solvent model.     

QSAR studies of phenylhydrazine-substituted tetronic acid derivatives based on the 1H NMR and 13C NMR chemical shifts

The quantitative structure–activity relationship models of 40 phenylhydrazine-substituted tetronic acid derivatives were established between the ¹H nuclear magnetic resonance (NMR) and ¹³C NMR chemical shifts and the antifungal activity against Fusarium graminearum, Botrytis cinerea, Rhizoctonia cerealis, and Colletotrichum capsici. The models were validated by R, R², R_A², variance inflation factor, F, and P values testing and residual analysis. It was concluded from the models that the ¹³C NMR chemical shifts of C8, C10, C7, and the ¹H NMR chemical shifts of Ha contributed positively to the activity against Fusarium graminearum, Botrytis cinerea, Colletotrichum capsici, and Rhizoctonia cerealis, respectively. The models indicated that decreasing the election cloud density of specific nucleuses in compounds, for example, by the substituting of electron withdrawing groups, would improve the antifungal activity. These models demonstrated the practical application meaning of chemical shifts in the quantitative structure–activity relationship study. Furthermore, a practical guide was provided for further structural optimization of the antifungal phenylhydrazine-substituted tetronic acid derivatives based on the ¹H NMR and ¹³C NMR chemical shifts.     

Ajanolide A, a new germacranolide fromAjania fruticulosa

A new germacranolide, ajanolide A, was isolated from aerial parts ofAjania fruticulosa by means of extraction with CHCl₃ and adsorption chromatography. This compound was identified as (1(10)E,3S,4Z,6R,7S,11R)-3-acetoxygermacra-1(10),4-dien-12,6-olide ((1S,7S,10R,13R)-7-acetoxy-4,8,13-trimethyl-11-oxabicyclo[8.3.0]trideca-4(E),8(Z)-dien-12-one) by X-ray diffraction analysis. 2D¹H−¹H (COSY) and¹³C−¹H (COSY) NMR spectroscopy was used for assigning the¹H and¹³C NMR signals in the spectra of ajanolide A. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 167–170, January, 1998.     

Changes in Dissociation Efficiency and Kinetics of Peptide Ions Induced by Basic Residues and Their Mechanistic Implication

With matrix-assisted laser desorption ionization (MALDI) time-of-flight (TOF) mass spectrometry, total abundance of product ions formed by dissociation inside (in-source decay, ISD) and outside (post-source decay, PSD) the source was measured for peptide ions [Y ₅ X + H]⁺, [XY ₅ + H]⁺, [Y ₂ XY ₃ + H]⁺, and [XY ₄ X + H]⁺ (X = tyrosine (Y), histidine (H), lysine (K), and arginine (R) with H for the ionizing proton). α-Cyano-4-hydroxycinammic acid was used as matrix. Product abundance became smaller in the presence of basic residues (H, K, and R), in the order Y > H ≈ K > R. In particular, product abundances in ISD of peptide ions with R were smaller than those with H or K by an order of magnitude, which, in turn, were smaller than that for [Y ₆ + H]⁺ by an order of magnitude. Product abundance was affected by the most basic residue when more than one basic residue was present. A kinetic explanation for the data was attempted under the assumption of quasi-thermal equilibrium for peptide ions in MALDI plume which undergoes expansion cooling. Dramatic disparity in product abundance was found to arise from small difference in critical energy and entropy. Results indicate similar transition structures regardless of basic residues present, where the ionizing proton keeps interacting with a basic site. Further implication of the results on the dissociation mechanism along b-y channels is discussed.     

Kinetik und Mechanismus der Diazotierung, 18. Mitt.: Kinetik und Mechanismus der Diazotierung des Anilins in chlorwasserstoffsaurem Methanol

Ohne ZusammenfassungI.H. Schmid undG. Muhr, Ber. dtsch. chem. Ges.70, 421 (1937); II.H. Schmid, Z. Elektrochem.43, 626 (1937); III.H. Schmid, Atti X. Congr. internat. Chim. Roma2, 484 (1938); IV.H. Schmid undA. Woppmann, Mh. Chem.83, 346 (1952); V. und VI.H. Schmid undR. Pfeifer, Mh. Chem.84, 829, 842 (1953); VII.H. Schmid, Mh. Chem.85, 424 (1954); zusammenfassender Ber.:H. Schmid, Chemiker-Ztg.78, 565, 683 (1954); VIII.H. Schmid, Mh. Chem.86, 668 (1955); IX.H. Schmid undA. F. Sami, Mh. Chem.86, 904 (1955); X.H. Schmid undE. Hallaba, Mh. Chem.87, 560 (1956); XI.H. Schmid undA. Woppmann, Mh. Chem.88, 411 (1957);H. Schmid, Mh. Chem.88, 161, 344 (1957); XII.H. Schmid undM. G. Fouad, Mh. Chem.88, 631 (1957);H. Schmid, Österr. Pat. 191 399, Kl. 12e₂ (Juni 1957);H. Schmid, Chemiker-Ztg.81, 603 (1957); XIII. und XIV.H. Schmid undCh. Essler, Mh. Chem.88, 1110 (1957);90, 222 (1959); XV.H. Schmid undA. Woppmann, Mh. Chem.90, 903 (1959); XVI.H. Schmid undCh. Essler, Mh. Chem.91, 484 (1960); XVII.H. Schmid undG. Muhr, Mh. Chem.91, 1198 (1960);H. Schmid, Mh. Chem.92, 174 (1961).     

An efficient synthesis of 1-cyanoacetyl-5-halomethyl-4,5-dihydro-1<Emphasis Type="Italic">H</Emphasis>-pyrazoles in ionic liquid

The synthesis of eleven 1-cyanoacetyl-5-hydroxy-5-halomethyl-4,5-dihydro-1H-pyrazoles from the reaction of 4-alkoxy-3-alken-2-ones f(R ³C(O)C(R ²) = C(R ¹)OR, where R ³ = CF₃, CCl₃, CHCl₂, CO₂ Et; R ²/R ¹ = H/H, H/Me, H/Et, -(CH₂)₄-, Me/H, H/Pr, and R = Me, Et) with cyanoacetohydrazide is reported. The reaction was carried out in the ionic liquid ([bmim][BF₄]) and molecular solvents. The results showed that when the ionic liquid was used as reaction medium, the reaction time was drastically decreased and the yield was improved. Correspondence: Marcos A. P. Martins, Núcleo de Química de Heterociclos – NUQUIMHE, Universidade Federal de Santa Maria, Santa Maria, RS, Brazil.     

Benzo‐Fused Double [7]Carbohelicene: Synthesis,Structures, and Physicochemical Properties

A benzo‐fused double [7]carbohelicene (D7H) was synthesized through a regioselective cyclodehydrogenation of a tetranaphthyl‐p ‐terphenyl‐based precursor. The twisted (D7H‐1) and anti ‐folded (D7H‐2) conformers of D7H were separated by recrystallization, and their double helicene structures with overlapping terminal benzene rings were unambiguously elucidated by X‐ray crystallography. A record‐high isomerization barrier (46.0 kcal mol⁻¹) in double helicenes was estimated based on density functional theory (DFT) calculation, which resulted in the excellent conformational stability of D7H. The physicochemical properties of D7H‐1 and D7H‐2 were investigated by UV/Vis absorption spectroscopy and cyclic voltammetry, displaying the variation of electronic structure upon conformational changes. The optical resolution of the racemic D7H‐1 was carried out by chiral HPLC, offering enantiopure D7H‐1‐(P ,P ) and D7H‐1‐(M ,M ), which were further characterized by circular dichroism spectroscopy.     

Influence de la structure sur l'hydrolyse des N-pyrrolylmethylene-2 anilines

Hydrolysis of the imine function of a series of Schiff bases derived from pyrrole-2-carboxaldehyde and substituted anilines (X = H, p-OCH₃, p-OC₂H₅, p-CH₃, p-Cl, p-Br, m-CN, m-NO₂, p-NO₂) was studied in all of the pH ranges. The hydrolysis curves log k_abs (mn^?1) = f(pH) were established in buffered aqueous methanol by polarography or amperometry. The shapes of the curves obtained for pH > 5 indicates that N-pyrrolylmethylene-2 anilines hydrolyse according to the same mechanism as N-benzylidene anilines. The particular stability of these products for pH < 5 permits one to obtain complete hydrolysis curves in acid media. A very good Hammett correlation (k_obs = + 1,73) has been established from the maxima which appear for strong acidity. This stability is interpreted as due to the specific electron-donating effect of the pyrrole nucleus. The influence of the structural parameter X on the morphology of the curves log k_abs = f(pH) and on the hydrolysis mechanism of the imine function is discussed in all of the pH ranges.     

Terpenoids from the barks of Magnolia maudiae (Dunn) Figlar

A new germacrenolide (1) and fourteen known terpenoids (2–15) were isolated from the barks of Magnolia maudiae (Dunn) Figlar (Magnoliaceae). The structure of (7αH,11βH)-2α,8α-dihydroxy-4α,5β-epoxy-germacr-1(10)-en-6α,12-olide (1) was elucidated by physical and spectroscopic data analysis, including 1D, 2D NMR and HR-ESI-MS. Lyratol F (9) was isolated from Magnolia for the first time. The structures of known compounds were established by comparing their spectroscopic data with those in literatures.     

An efficient synthesis of 1-cyanoacetyl-5-halomethyl-4,5-dihydro-1H-pyrazoles in ionic liquid

The synthesis of eleven 1-cyanoacetyl-5-hydroxy-5-halomethyl-4,5-dihydro-1H-pyrazoles from the reaction of 4-alkoxy-3-alken-2-ones f(R ³C(O)C(R ²) = C(R ¹)OR, where R ³ = CF₃, CCl₃, CHCl₂, CO₂ Et; R ²/R ¹ = H/H, H/Me, H/Et, -(CH₂)₄-, Me/H, H/Pr, and R = Me, Et) with cyanoacetohydrazide is reported. The reaction was carried out in the ionic liquid ([bmim][BF₄]) and molecular solvents. The results showed that when the ionic liquid was used as reaction medium, the reaction time was drastically decreased and the yield was improved.     

Bruceines D,E and H

The absolute stereochemistry of bruceines D, E and H has been confirmed to be 1S, 5S, 7R, 8R, 9R, 10S, 11R, 12S, 13R, 14R, 15R and additionally 2S for bruceine E by a combination of 2D nmr [¹H-¹H and ¹H-¹³C (one-bond and long-range) COSY] nOe and cd spectroscopic analyses.     

Identification of radiation‐induced radical structure in azocalix[4]arene: an EPR study

A macrocyclic azocalix[4]arene (1) based ester derivative was synthesized. The single crystals of azocalix[4]arene were produced by slow evaporation of concentrated ethyl acetate solutions. These single crystals were exposed to ⁶⁰Co gamma rays with a dose rate of 0.980 kGy h^‐1 for 48 and 72 h to produce a stable free radical. Electron paramagnetic resonance (EPR) measurements were performed in three mutually perpendicular planes of the single crystal in the magnetic field, in addition, temperature dependence of the EPR signal was studied between 120 K and 450 K. The spectra were found to be temperature and angular dependent. Analysis based on the spectra recorded showed that a free radical was formed by fission of a C–H bond. This radical is described as ^?C_aHC_bH₃ The averages of the principal values of the hyperfine parameters and g‐factor are: g = 2.0034, A_Ha = 1.28 mT, A_H1=H2 = 1.00 mT, and A_H3 = 0.49 mT. Copyright © 2013 John Wiley & Sons, Ltd.     

Kinetik und Mechanismus der Diazotierung, 17. Mitt.: Kinetik der Diazotierung in nicht wässerigen Lösungsmitteln

Ohne ZusammenfassungI.H. Schmid undG. Muhr, Ber. dtsch. chem. Ges.70, 421 (1937); II.H. Schmid, Z. Elektrochem.43, 626 (1937); III.H. Schmid, Atti X. Congr. internat. Chim. Roma2, 484 (1938); IV.H. Schmid undA. Woppmann, Mh. Chem.83, 346 (1952); V. und VI.H. Schmid undR. Pfeifer, Mh. Chem.84, 829, 842 (1953); VII.H. Schmid, Mh. Chem.85, 424 (1954); Zusammenfassender Ber.:H. Schmid, Chemiker-Ztg.78, 565, 683 (1954); VIII.H. Schmid, Mh. Chem.,86, 668 (1955); IX.H. Schmid undA. F. Sami, Mh. Chem.86, 904 (1955); X.H. Schmid undE. Hallaba, Mh. Chem.87, 560 (1956); XI.H. Schmid undA. Woppmann, Mh. Chem.88, 411 (1957);H. Schmid, Mh. Chem.88, 161, 344 (1957); XII.H. Schmid undM. G. Fouad, Mh. Chem.88, 631 (1957);H. Schmid, Österr. Pat. 191 399, Kl. 12 e₂ (Juni 1957);H. Schmid, Chemiker-Ztg.81, 603 (1957); XIII. und XIV.H. Schmid undCh. Essler, Mh. Chem.88, 1110 (1957);90, 222 (1959); XV.H. Schmid undA. Woppmann, Mh. Chem.90, 903 (1959); XVI.H. Schmid undCh. Essler, Mh. Chem.91, 484 (1960).     

Seragamides A-F, new actin-targeting depsipeptides from the sponge Suberites japonicus Thiele

Six new depsipeptides, seragamides A-F (1-6), and a known geodiamolide I (7) have been isolated as cytotoxic metabolites from the Okinawan sponge Suberites japonicus. Their structures were elucidated by means of spectroscopic analysis and chemical transformations. Seragamide A (1) promotes the polymerization of G-actin and stabilizes F-actin filaments.     

Acovulparine,a New Norditerpene Alkaloid from Aconitum vulparia

Acovulparine (=1α,6β,7R,8β,14α,16β)‐4‐(hydroxymethyl)‐1,6,14,16‐tetramethoxyaconit‐19‐ene‐7,8‐diol; 1 ), a new norditerpene alkaloid, was isolated from the MeOH extract of the whole plants of Aconitum vulparia Reichenb ., together with the known compounds lycoctonine ( 2 ) and delcosine ( 3 ). The structures were established by HR‐EI‐MS and advanced 2D‐NMR, including ¹H‐NMR, JMOD, ¹H,¹H‐COSY, HSQC, and HMBC experiments. Acovulparine was found to contain the rare C(19)?N azomethine group.     

Five New Sesquiterpenoids from Parasenecio petasitoides

From the whole plants of Parasenecio petasitoides, five new sesquiterpenoids were isolated, (E,E)‐3α,9β‐dihydroxy‐6βH,11βH‐13‐norgermacra‐1(10),4‐dien‐11,6‐carbolactone ( 2 ), (E,E)‐2α,9β‐dihydroxy‐6βH,11βH‐13‐norgermacra‐1(10),4‐dien‐11,6‐carbolactone ( 3 ), (E,E)‐2α,9β‐dihydroxy‐6βH,11αH‐13‐norgermacra‐1(10),4‐dien‐11,6‐carbolactone ( 4 ), (E)‐15‐hydroxy‐2‐oxo‐6βH,11αH‐13‐norguaia‐3‐ene‐11,6‐carbolactone ( 7 ), and (E)‐11β,15‐dihydroxy‐2‐oxo‐6βH‐13‐norguaia‐3‐ene‐11,6‐carbolactone ( 8 ), together with three known compounds, deacetyl herbolide A ( 1 ), jacquilenin ( 5 ), and (E)‐15‐hydroxy‐2‐oxo‐6βH,11βH‐13‐norguaia‐3‐ene‐11,6‐carbolactone ( 6 ). The structures of these natural products were elucidated spectroscopically, especially by 1D‐ and 2D‐NMR techniques, in combination with high‐resolution mass spectroscopy.     

Concomitant polymorphism and conformational isomerism in 4‐acetylresorcinol

Two polymorphs of the title compound [systematic name: 1‐(2,4‐dihydroxyphenyl)ethanone], C₈H₈O₃, were investigated. The known structure [designated (I‐M); P2₁/c, Z = 4; previously investigated at room temperature by Robert, Moore, Eichhorn & Rillema (2007). Acta Cryst. E 63 , o4252] was redetermined at low temperature, and a new form [(I‐O); P2₁2₁2₁, Z = 12] was discovered in the same sample. In both forms, the molecules are planar (apart from the methyl H atoms) and they contain intramolecular O—H...O=C hydrogen bonds. In polymorph (I‐M), molecules are linked into chains by a single intermolecular O—H...O hydrogen bond, and the chains are linked into sheets by two C—H...O hydrogen bonds. Three O—H...O hydrogen bonds link the molecules of polymorph (I‐O) into chains and neighbouring chains are connected by one C—H...O interaction to form an offset layer structure. Two weak methyl C—H...O interactions link the layers.     

Exploiting Aromatic Interactions for β‐Peptide Foldamer Helix Stabilization: A Significant Design Element

Tetrameric H10/12 helix stabilization was achieved by the application of aromatic side‐chains in β‐peptide oligomers by intramolecular backbone–side chain CH–π interactions. Because of the enlarged hydrophobic surface of the oligomers, a further aim was the investigation of the self‐assembly in a polar medium for the β‐peptide H10/12 helices. NMR, ECD, and molecular modeling results indicated that the oligomers formed by cis‐[1S,2S]‐ or cis‐[1R,2R]‐1‐amino‐1,2,3,4‐tetrahydronaphthalene‐2‐carboxylic acid (ATENAC) and cis‐[1R,2S]‐ or cis‐[1S,2R]‐2‐aminocyclohex‐3‐enecarboxylic acid (ACHEC) residues promote stable H10/12 helix formation with an alternating backbone configuration even at the tetrameric chain length. These results support the view that aromatic side‐chains can be applied for helical structure stabilization. Importantly, this is the first observation of a stable H10/12 helix with tetrameric chain‐length. The hydrophobically driven self‐assembly was achieved for the helix‐forming oligomers, seen as vesicles in transmission electron microscopy images. The self‐association phenomenon, which supports the helical secondary structure of these oligomers, depends on the hydrophobic surface area, because a higher number of aromatic side‐chains yielded larger vesicles. These results serve as an essential element for the design of helices relating to the H10/12 helix. Moreover, they open up a novel area for bioactive foldamer construction, while the hydrophobic area gained through the aromatic side‐chains may yield important receptor–ligand interaction surfaces, which can provide amplified binding strength.     

Metabolites of microorganisms. 144th communication. The crystal and molecular structure of 3-hydroxy-4-methylproline

A new amino acid isolated from the acid hydrolysate of the antibiotic Echinocandin B is shown by X-ray analysis to be 2,3–trans-3,4-cis-3-hydroxy-4-methylproline. The crystals are orthorhombic, a = 5.633 Å, b = 8.760 Å, c = 14.314 Å, Z = 4, space group P2₁2₁2₁. The structure was determined by direct methods and refined by least-squares analysis to a final R value of 0.032 for 532 reflections. The molecule exists as a zwitterion forming one O? H…O and two N? H…O hydrogen bonds.