中空铜纳米线的拉伸断裂分布与初始滑移分布的关系

构建了系列球形中空结构的纳米线(NW),采用分子动力学(MD)对每个模型300个不同初始态的样本开展拉伸形变模拟。并利用基于密度的噪声应用空间聚类(density-based spatial clustering of applications with noise,DBSCAN)机器学习算法,获得了初始滑移面的位置。基于大数据统计,分析了初始滑移位置分布以及断裂位置分布两者之间的相关性。研究结果表明：当内部中空半径较小时,断裂位置分布形成于塑性形变阶段,初始滑移分布与断裂位置分布之间无显著的相关性;但是对于脆性特征明显的大中空半径的NW,高能内表面诱导产生的滑移面迅速积累,产生颈缩并导致最终的断裂。因此当内部中空结构达到一定尺寸时初始滑移位置的分布与最终断裂位置的分布之间有明确的因果关系。     

中空铜纳米线的拉伸断裂分布与初始滑移分布的关系

构建了系列球形中空结构的纳米线(NW),采用分子动力学(MD)对每个模型300个不同初始态的样本开展拉伸形变模拟。并利用基于密度的噪声应用空间聚类(density-based spatial clustering of applications with noise,DBSCAN)机器学习算法,获得了初始滑移面的位置。基于大数据统计,分析了初始滑移位置分布以及断裂位置分布两者之间的相关性。研究结果表明：当内部中空半径较小时,断裂位置分布形成于塑性形变阶段,初始滑移分布与断裂位置分布之间无显著的相关性;但是对于脆性特征明显的大中空半径的NW,高能内表面诱导产生的滑移面迅速积累,产生颈缩并导致最终的断裂。因此当内部中空结构达到一定尺寸时初始滑移位置的分布与最终断裂位置的分布之间有明确的因果关系。     

π-SCF-Molecular Mechanics PIMM: Formulation,parameters, applications

Summary A -SCF/Molecular Mechanics method (PIMM) for the calculation of heats of formation, molecular geometries and charge density distributions of organic molecules is described. The method combines a -SCF molecular orbital calculation and the -charge evaluation procedure PEOE of Marsilli and Gasteiger with molecular mechanics. The formulas and parameters use are given. A series of results for small molecules is presented and compared with experimental data.     

K-Means聚类分析法筛选柠檬香茅茎叶差异蛋白及鉴定

柠檬香茅含有大量的香茅精油,运用十分广泛,然而其茎、叶的精油含量却相差悬殊。 为探索柠檬香茅精油代谢相关的蛋白途径,本文对柠檬香茅旗叶、成熟叶及茎秆等材料进行精油含量、总蛋白含量测定及双向凝胶电泳(2-DE)表达谱分析,运用k-means聚类分析方法对2-DE电泳中差异蛋白斑点的丰度、等电点和相对分子质量进行聚类分析和讨论,结果表明,旗叶和茎秆上调表达的蛋白质斑点的聚类对于相对分子质量变化敏感,成熟叶上调表达蛋白质斑点对于丰度的变化较为敏感。 预测了精油代谢功能相关的蛋白质斑点15个,挖取预测蛋白质斑点通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF/TOF-MS)成功鉴定了9个蛋白质。 本研究为柠檬香茅精油的蛋白代谢途径提供新的基础信息及研究思路。     

C D : a computer program to generate 1D, 2D and 3D grids of functions dependent on the molecular ab initio electron density

A program to compute many functions dependent on the electron density ρ(r) from the results of ab initio molecular calculations is presented. The program allows the generation of different one-, two-, and three-dimensional grids for further graphical representation or numerical analysis. Other options like extracting separate atom contributions to the function computed or locating maximum and minimum values are also implemented. A number of illustrative applications regarding different ρ(r)-dependent functions are presented and the performance and portability of the program is discussed.     

Planarization of 8π Rings. I. Confirmation of a speculation by Ermer on the ground state of a strained cyclooctatetraene and studies on analogous oxepins

We describe by ab initio calculations several rings containing eight π electrons, forced into planarity by altering the balance of strain with fused rings. These include a tricyclic fused-cyclopropano ring derivative of cyclooctatetraene suggested by Ermer to be planar in its ground state, an analogous tricyclic oxepin, and cyclobutano ring-fused cyclooctatetraene previously described experimentally. We verify that cyclopropano ring fusion planarizes rings with eight π electrons; however, by bond alternation and magnetic susceptibility suppression, forming the planar ring leaves the system anti-aromatic. © 1998 John Wiley & Sons, Inc. Int J Quant Chem 67: 367–376, 1998     

铈卤氧化物的ESCA表征（Ⅱ）—Ce的M5N45N45俄歇峰

研究了ＸＰＳ诱导的ＣｅＭ５Ｎ４５Ｎ４５俄歇峰，由于其终态空穴处于芯能级，俄歇峰有较好的分辨率，从ＣｅＭ５Ｎ４５Ｎ４５的俄歇峰可获得中心离子Ｃｅ的电子云密度等信息，发现其俄歇参数与配位体的极化变形程度有关，从而解释了双烯烃定向聚合必须有稀土卤氧键存在的原因。     

A systematic docking approach. Application to the α-cyclodextrin/phenyl-ethanol complex

A new approach for systematic docking is applied to the structure of the -cyclodextrin/phenyl-ethanol complex. This methodology includes systematic scanning of the possible guest positions, clustering of low energy structures into families and final refinement using molecular mechanics. The clustering was performed on internal parameters of the complex by a program named PROXIM based on a very simple proximity criterion. This program organized nearly 30 000 structures into about 100 families. Thirty conformations have been considered (10 and 20 for the complexation on the primary and secondary face respectively), the two forms of complexation encountered in the crystal packing yield the lowest energy combination.     

小波变换用于色谱重叠峰的解析

利用小波变换的时频局部化性质，通过对色谱重叠峰信号小波变换后的某些频率段进行放大，使重叠谱峰得到了分离，并将此方法用于苯和甲苯二组分色谱体系的定量分析，重叠峰中各组分均得到了良好的线性关系及令人满意的定量分析。本文还讨论了不同小波基、分解的次数及放大系数在解析结果的影响。     

Heat-induced changes to lipid molecular structure in Vimy flaxseed: spectral intensity and molecular clustering

Autoclaving was used to manipulate nutrient utilization and availability. The objectives of this study were to characterize any changes of the functional groups mainly associated with lipid structure in flaxseed (Linum usitatissimum, cv. Vimy), that occurred on a molecular level during the treatment process using infrared Fourier transform molecular spectroscopy. The parameters included lipid CH(3) asymmetric (ca. 2959 cm(-1)), CH(2) asymmetric (ca. 2928 cm(-1)), CH(3) symmetric (ca. 2871 cm(-1)) and CH(2) symmetric (ca. 2954 cm(-1)) functional groups, lipid carbonyl CO ester group (ca. 1745 cm(-1)), lipid unsaturation group (CH attached to CC) (ca. 3010 cm(-1)) as well as their ratios. Hierarchical cluster analysis (CLA) and principal components analysis (PCA) were conducted to identify molecular spectral differences. Flaxseed samples were kept raw for the control or autoclaved in batches at 120°C for 20, 40 or 60 min for treatments 1, 2 and 3, respectively. Molecular spectral analysis of lipid functional group ratios showed a significant decrease (P<0.05) in the CH(2) asymmetric to CH(3) asymmetric stretching band peak intensity ratios for the flaxseed. There were linear and quadratic effects (P<0.05) of the treatment time from 0, 20, 40 and 60 min on the ratios of the CH(2) asymmetric to CH(3) asymmetric stretching vibration intensity. Autoclaving had no significant effect (P>0.05) on lipid carbonyl CO ester group and lipid unsaturation group (CH attached to CC) (with average spectral peak area intensities of 138.3 and 68.8 IR intensity units, respectively). Multivariate molecular spectral analyses, CLA and PCA, were unable to make distinctions between the different treatment original spectra at the CH(3) and CH(2) asymmetric and symmetric region (ca. 2988-2790 cm(-1)). The results indicated that autoclaving had an impact to the mid-infrared molecular spectrum of flaxseed to identify heat-induced changes in lipid conformation. A future study is needed to quantify the relationship between lipid molecular structure changes and functionality/availability.     

Recent developments in polymeric charge transfer complexes

The recent literature on polymeric charge transfer complexes is reviewed with emphasis on the author's own work. After a definition of the area and a survey of investigations on the spatial arrangement of donor and acceptor sites in the solid state, a variety of applications of these complexes is presented. Electrically conductive polymers are excluded. These applications are: compatibilization of polymer blends, liquid crystalline supramolecular organization, new developments in photo-conductivity, electroluminescence, nonlinear optical properties, photorefractivity and reversible optical storage.     

氢氧化镍正极材料的X射线衍射峰强比与其电化学性能关系研究

利用“管道式合成”方法合成了5种成分相同、结构不同的Ni(OH)2样品.采用X射线衍射(XRD)、场发射扫描电镜表征材料的微观结构及参数.测试了材料的电化学性能,考察了I101/I001比值与Ni(OH)2材料电化学性能的关系.研究结果表明,随I101/I001比值的增大,样品的电化学性能呈下降的趋势.说明XRD峰强比...     

Potential antioxidant compounds in Mallotus species fingerprints. Part I: Indication, using linear multivariate calibration techniques

Some Mallotus species are used in traditional medicine in Vietnam and China. Some also show interesting activities, such as antioxidant and cytotoxic ones. Combining fingerprint technology with data-handling techniques allows indicating the peaks potentially responsible for given activities. In this study it is aspired to indicate from chromatographic fingerprints the peaks potentially responsible for the antioxidant activity of several Mallotus species. Relevant information was extracted using linear multivariate calibration techniques, both before and after alignment of the fingerprints with correlation optimized warping (COW). From the studied techniques, Stepwise Multiple Linear Regression is least recommended as it made an inadequate variable selection. Principal Component Regression theoretically can take largely varying variables uncorrelated to the antioxidant activity into account. However, in practice in the actual case study this problem was limited. These problems in principle do not occur using Partial Least Squares (PLS) models. Of the tested PLS methods, Orthogonal Projections to Latent Structures was preferred because of its simplicity, reproducibility, reduced model complexity and improved interpretability of the regression coefficients, yielding a clearer view on the individual contribution of the compounds. Furthermore, reducing analysis times from 60 min to 35 and 22.5 min resulted in the same main compounds, indicated responsible for the antioxidant activity. Models built after alignment by COW did not result in additional information.     

Differential density matrix overlap: an index for assessment of electron correlation in atoms and molecules

Summary A new index, called the differential density matrix overlap (DDMO), is proposed for assessment of the electron correlation effects in atoms and molecules. DDMO can be easily calculated as the negative value of the correlation energy derivative with respect to the relative position of the occupied and virtual orbitals. DDMO is transparent to physical interpretation. It can serve as a tool for analyzing the accuracy of approximate electron correlation methods and the validity of the Hartree-Fock wavefunction as the zeroth-order approximation. The properties of DDMO are discussed using test calculations on 11 atoms and molecules as an example.