Estimating the Polydispersity of GPC Slices Due to Coeluting Comb‐Polymers Synthesized by Grafting Monodisperse Side Chains Onto a Backbone Having Broad Molecular Weight Distribution

The molecular weight distribution, polydispersity and the distribution of side chains within a GPC‐slice have been calculated for coeluting comb‐shaped polymers. It is assumed that the polymers were synthesized by grafting monodisperse side chains onto a backbone having a broad molecular weight distribution. Despite the broad polydispersity of the backbone the polydispersity within a GPC‐slice is rather narrow, as is the distribution of side chains. Consequently the effect of polydispersity on properties, which can be obtained by GPC coupled with molar mass sensitive detectors is negligible. However, this result is true only for the specific branching mechanism investigated.     

Adsorption of comb copolymers on weakly attractive solid surfaces

In this work continuum and lattice Monte Carlo simulation methods are used to study the adsorption of linear and comb polymers on flat surfaces. Selected polymer segments, located at the tips of the side chains in comb polymers or equally spaced along the linear polymers, are attracted to each other and to the surface via square-well potentials. The rest of the polymer segments are modeled as tangent hard spheres in the continuum model and as self-avoiding random walks in the lattice model. Results are presented in terms of segment-density profiles, distribution functions, and radii of gyration of the adsorbed polymers. At infinite dilution the presence of short side chains promotes the adsorption of polymers favoring both a decrease in the depletion-layer thickness and a spreading of the polymer molecule on the surface. The presence of long side chains favors the adsorption of polymers on the surface, but does not permit the spreading of the polymers. At finite concentration linear polymers and comb polymers with long side chains readily adsorb on the solid surface, while comb polymers with short side chains are unlikely to adsorb. The simple models of comb copolymers with short side chains used here show properties similar to those of associating polymers and of globular proteins in aqueous solutions, and can be used as a first approximation to investigate the mechanism of adsorption of proteins onto hydrophobic surfaces.     

High stability of the polyproline II helix in polypeptide bottlebrushes

Polymer bottlebrushes with monodisperse oligoproline side chains were efficiently synthesized, and the conformation of the peptide side chains in different solvents was investigated. Polymers with number-average degrees of polymerization (DPn) of 89 and 366 were obtained by polymerization of the macromonomer in iPrOH/MeCN (1:1) and hexafluoroisopropanol, respectively. Circular dichroism (CD) spectra of the bottlebrush polymers in the neutral and charged states reveal that the oligoproline side chains attain stable polyproline II (PPII) helical conformations not only in aqueous solution, but also in aliphatic alcohol solutions. Dense attachment of oligopeptides onto a linear polymer chain did not lead to an increase in helix content. The possible effects of the main-chain length on the conformational stability were examined. The switching between the polyproline I (PPI) and PPII helical conformations for the oligoproline side chains in aliphatic alcohol solutions is believed to be inhibited by the overcrowded structure in the polymer bottlebrushes.     

Functionalization of polypropylene by hydroboration

This article relates to functionalized polypropylene with high molecular weight and high crystallinity. The chemistry involves the hydroboration of poly(propylene-co-1,4-hexadiene) with borane reagents, such as diborane and 9-BBN. In turn, the borane-containing polymers are very versatile and can be easily converted to various functionalized polymers under mild reaction conditions. Despite the heterogeneous reaction conditions, both hydroboration and interconversion reactions were very effective using appropriate solvents. Apparently, the double bonds in the side chains are located in the amorphous phase and are ready for reaction with reagents. Overall, this functionalization process preserves the molecular weight and most of the crystallinity of poly(propylene-co-1,4-hexadiene). © 1993 John Wiley & Sons, Inc.     

Importance of chirality and reduced flexibility of protein side chains: a study with square and tetrahedral lattice models

Side chains of amino acid residues are the determining factor that distinguishes proteins from other unstable chain polymers. In simple models they are often represented implicitly (e.g., by spin states) or simplified as one atom. Here we study side chain effects using two-dimensional square lattice and three-dimensional tetrahedral lattice models, with explicitly constructed side chains formed by two atoms of different chirality and flexibility. We distinguish effects due to chirality and effects due to side chain flexibilities, since residues in proteins are L residues, and their side chains adopt different rotameric states. For short chains, we enumerate exhaustively all possible conformations. For long chains, we sample effectively rare events such as compact conformations and obtain complete pictures of ensemble properties of conformations of these models at all compactness region. This is made possible by using sequential Monte Carlo techniques based on chain growth method. Our results show that both chirality and reduced side chain flexibility lower the folding entropy significantly for globally compact conformations, suggesting that they are important properties of residues to ensure fast folding and stable native structure. This corresponds well with our finding that natural amino acid residues have reduced effective flexibility, as evidenced by statistical analysis of rotamer libraries and side chain rotatable bonds. We further develop a method calculating the exact side chain entropy for a given backbone structure. We show that simple rotamer counting underestimates side chain entropy significantly for both extended and near maximally compact conformations. We find that side chain entropy does not always correlate well with main chain packing. With explicit side chains, extended backbones do not have the largest side chain entropy. Among compact backbones with maximum side chain entropy, helical structures emerge as the dominating configurations. Our results suggest that side chain entropy may be an important factor contributing to the formation of alpha helices for compact conformations.     

Protein polymer drag-tags for DNA separations by end-labeled free-solution electrophoresis

We demonstrate the feasibility of end-labeled free-solution electrophoresis (ELFSE) separation of DNA using genetically engineered protein polymers as drag-tags. Protein polymers are promising candidates for ELFSE drag-tags because their sequences and lengths are controllable not only to generate monodisperse polymers with high frictional drag, but also to meet other drag-tag requirements for high-resolution separations by microchannel electrophoresis. A series of repetitive polypeptides was designed, expressed in Escherichia coli, and purified. By performing an end-on conjugation of the protein polymers to a fluorescently labeled DNA oligomer (22 bases) and analyzing the electrophoretic mobilities of the conjugate molecules by free-solution capillary electrophoresis (CE), effects of the size and charge of the protein polymer drag-tags were investigated. In addition, the electrophoretic behavior of bioconjugates comprising relatively long DNA fragments (108 and 208 bases) and attached to uncharged drag-tags was observed, by conjugating fluorescently labeled polymerase chain reaction (PCR) products to charge-neutral protein polymers, and analyzing via CE. We calculated the amount of friction generated by the various drag-tags, and estimated the potential read-lengths that could be obtained if these drag-tags were used for DNA sequencing in our current system. The results of these studies indicate that larger and uncharged drag-tags will have the best DNA-resolving capability for ELFSE separations, and that theoretically, up to 233 DNA bases could be sequenced using one of the protein polymer drag-tags we produced, which is electrostatically neutral with a chain length of 337 amino acids. We also show that denatured (unfolded) polypeptide chains impose much greater frictional drag per unit molecular weight than folded proteins, such as streptavidin, which has been used as a drag-tag before.     

A CGenFF-based force field for simulations of peptoids with both cis and trans peptide bonds

Peptoids, or poly-n-substituted glycines, are peptide-like polymers composed of a flexible backbone decorated with diverse chemical side chains. Peptoids can form a variety of self-assembling structures based on the type and sequence of the side chains attached to their backbones. All-atom molecular dynamics simulations have been useful in predicting the conformational structures of proteins and will be valuable tools for identifying combinations of peptoid side chains that may form interesting folded structures. However, peptoid models must address a major degree of freedom not common in proteins – the cis/trans isomerization of the peptide bond. This work presents CHARMM general force field (CGenFF) parameters developed to accurately represent peptoid conformational behavior, with an emphasis on a correct representation of both the cis and trans isomers of the peptoid backbone. These parameters are validated against experimental and quantum mechanics data and used to simulate three peptoid side chains in explicitly solvated systems. © 2019 Wiley Periodicals, Inc.     

Diketopyrrolopyrrole‐based Conjugated Polymers Bearing Branched Oligo(Ethylene Glycol) Side Chains for Photovoltaic Devices

Conjugated polymers are essential for solution‐processable organic opto‐electronic devices. In contrast to the great efforts on developing new conjugated polymer backbones, research on developing side chains is rare. Herein, we report branched oligo(ethylene glycol) (OEG) as side chains of conjugated polymers. Compared with typical alkyl side chains, branched OEG side chains endowed the resulting conjugated polymers with a smaller π‐π stacking distance, higher hole mobility, smaller optical band gap, higher dielectric constant, and larger surface energy. Moreover, the conjugated polymers with branched OEG side chains exhibited outstanding photovoltaic performance in polymer solar cells. A power conversion efficiency of 5.37 % with near‐infrared photoresponse was demonstrated and the device performance could be insensitive to the active layer thickness.     

Synthesis of “living” chains of polyvinylpyridine and their application to the construction of homo- and hybrid polymer with complex architecture

Experimental conditions ensuring the formation of living poly(2- and 4-vinyl pyridine) chains in the vinyl pyridine - allyl derivatives of chromium, molybdenum and tungsten systems are described. Variation of the reagents nature, polarity of the solvent permits to obtain polymers differing in their structural and molecular parameters. Synthesized polymers contain block and graft sequences, as well as macrocyclic fragments. Living chains under consideration were applied for polymerization of different monomers. Hybrid polymers obtained by this way were studied in detail by the same methods as the homopolymers.     

Well-packed chains and aggregates in the emission mechanism of conjugated polymers

We synthesized dialkoxy-substituted poly[phenylene vinylene]s (dROPPV-1/1, 0.2/1, and 0/1) consisting of two repeating units with different side-chain lengths (methoxy and 3,7-dimethyloctyloxy). These polymers can serve as a model system to clarify roles of aggregates (the sites with ground-state interchain interactions) and the independent chain segments in the well-packed chains (the chain segments that are compactly packed without interaction) in the emission mechanism of conjugated polymers. Due to the packing of polymer chains, films of all of these polymers are accessible to interchain excitations, after which excitons can re-form to result in delayed luminescence. Besides, some chains form aggregates so that the delayed luminescence is no more the ordinary single-chain emission but red-shifted and less structured. Not only the re-formation of these indirect excitons but also the aggregation of chains are facilitated in the polymers with short methoxy side groups, revealing that both packing and aggregation of chain segments require a short spacing between polymer chains. However, the incorporation of other side chains such as the 3,7-dimethyloctyloxy group to dROPPVs is necessary for the formation of aggregates because these long branched side chains can reduce the intrachain order imposed by the short methoxy groups, which accounts for the absence of aggregate emission in the well-studied poly[2,5-dimethoxy-1,4-phenylene vinylene]. This study reveals that the well-packed chains do not necessarily form aggregates. We also show that the photophysical properties and the film morphology of conjugated polymers can be deliberately controlled by fine-tuning of the copolymer compositions, without altering the optical properties of single polymer chains (e.g., as in dilute solutions).     

PAMAM-containing semiconducting polymers: Effect of dendritic side chains on optoelectronic and solid-state properties

Dendronized polymers are a particularly interesting platform for the preparation of advanced semiconductors given their high degree of functionalization, monodispersity, and bulkiness. Despite advantageous features, the incorporation of dendritic moieties in semiconducting polymers is still relatively underexplored, and the impact on the optoelectronic, thermomechanical, and solid-state properties are difficult to predict. This work focuses on the incorporation of polyamidoamine (PAMAM) dendritic side chains to semicrystalline polymers based on diketopyrrolopyrrole. Using a versatile synthetic strategy based on the azide-alkyne Huisgen 1,3-dipolar cycloaddition, dendronized semiconducting polymers were prepared and the effect of the dendritic side chains on different properties were carefully characterized using different techniques. The dendritic side chains were found to reduce aggregation and crystallinity of the polymers in thin films. PAMAM-containing semiconducting polymers were also shown to have good charge transport properties in organic field-effect transistors, within the same order of magnitude to that of diketopyrrolopyrrole-based polymers bearing branched alkyl chains. This new design approach is particularly interesting to develop advanced semiconducting polymers given its synthetic versatility and the structural diversity of the dendronized moieties. Furthermore, the utilization of dendritic moieties in semiconducting polymers is a promising approach to fine-tune the thermomechanical properties toward semiconducting polymers for next-generation organic electronics.     

Poly(L-lysine) containing azobenzene units in the side chains: influence of the degree of substitution on liquid crystalline structure and thermotropic behaviour

The structure of poly(L-lysine)s containing between 20% and 100% of azobenzene units in the side chains has been studied by X-ray diffraction, between room temperature and 250 C. Except for samples having very low contents of azobenzene, the polymers are found to exhibit mesomorphic structures of the smectic A1 type deriving from the beta -structure of polypeptides. For polymers in which all lysine residues were substituted, the polypeptide main chains are arranged in layers corresponding to the sheets of a polypeptide 'antiparallel' beta -structure, and the side chains are perpendicular to the smectic layers. For polymers containing both substituted and free lysine side chains, each smectic layer results from the superposition of two layers: one layer contains the free lysine side chains; the other contains the azobenzenemodified lysine side chains and the polypeptide main chains that are arranged in 'antiparallel' beta -structures. All polymers exhibit only one smectic A mesophase as a function of temperature. The thickness of the smectic layers increases with increasing temperature until a thickness is reached that corresponds to the maximum interaction between the azobenzene mesogens in their trans -configuration.     

An Efficient and Modular Route to Sequence‐Defined Polymers Appended to DNA

Inspired by biological polymers, sequence‐controlled synthetic polymers are highly promising materials that integrate the robustness of synthetic systems with the information‐derived activity of biological counterparts. Polymer–biopolymer conjugates are often targeted to achieve this union; however, their synthesis remains challenging. We report a stepwise solid‐phase approach for the generation of completely monodisperse and sequence‐defined DNA–polymer conjugates using readily available reagents. These polymeric modifications to DNA display self‐assembly and encapsulation behavior—as evidenced by HPLC, dynamic light scattering, and fluorescence studies—which is highly dependent on sequence order. The method is general and has the potential to make DNA–polymer conjugates and sequence‐defined polymers widely available.     

侧链结构对磺化聚芳醚性能及微观形貌的影响

比较了3种主链结构相同而侧链结构不同的磺化聚芳醚(SPAE)材料的性能. 分析了侧链结构对聚合物的吸水、 溶胀及质子传导行为的影响. 结果表明, 在相同的离子交换容量(IEC)条件下, 具有柔顺脂肪族侧链的聚芳醚材料具有较高的质子传导率. 其原因是由于柔顺的脂肪族侧链比刚性的芳香族侧链更易运动, 有利于侧链末端磺酸基团的聚集, 进而形成离子簇. 3种聚合物微观形貌的分析结果表明, 含柔顺侧链结构的聚合物薄膜具有更大的质子传输通道, 其结果与聚合物的宏观吸水和传导现象相吻合.     

Synthesis of well‐defined comb‐like graft (co)polymers by nucleophilic substitution reaction between living polymers and polyhalohydrocarbon

A series of graft (co)polymers were synthesized by nucleophilic substitution reaction between iodinated 1,2‐polybutadiene (PB‐I, backbone) and living polymer lithium (side chains). The coupling reaction between PB‐I and living polymers can finish within minutes at room temperature, and high conversion (up to 92%) could be obtained by effectively avoiding side reaction of dimerization when living polymers were capped with 1,1‐diphenylethylene. By virtue of living anionic polymerization, backbone length, side chain length, and side chain composition, as well as graft density, were well controlled. Tunable molecular weight of graft (co)polymers with narrow molecular weight distribution can be obtained by changing either the lengths of side chain and backbone, or the graft density. Graft copolymers could also be synthesized with side chains of multicomponent polymers, such as block polymer (polystyrene‐b‐polybutadiene) and even mixed polymers (polystyrene and polybutadiene) as hetero chains. Thus, based on living anionic polymerization, this work provides a facile way for modular synthesis of graft (co)polymers via nucleophilic substitution reaction between living polymers and polyhalohydrocarbon (PB‐I). © 2013 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2013     

Controlling the structure of sequence‐defined poly(phosphodiester)s for optimal MS/MS reading of digital information

Digital polymers are monodisperse chains with a controlled sequence of co‐monomers, defined as letters of an alphabet, and are used to store information at the molecular level. Reading such messages is hence a sequencing task that can be efficiently achieved by tandem mass spectrometry. To improve their readability, structure of sequence‐controlled synthetic polymers can be optimized, based on considerations regarding their fragmentation behavior. This strategy is described here for poly(phosphodiester)s, which were synthesized as monodisperse chains with more than 100 units but exhibited extremely complex dissociation spectra. In these polymers, two repeating units that differ by a simple H/CH₃ variation were defined as the 0 and 1 bit of the ASCII code and spaced by a phosphate moiety. They were readily ionized in negative ion mode electrospray but dissociated via cleavage at all phosphate bonds upon collisional activation. Although allowing a complete sequence coverage of digital poly(phosphodiester)s, this fragmentation behavior was not efficient for macromolecules with more than 50 co‐monomers, and data interpretation was very tedious. The structure of these polymers was then modified by introducing alkoxyamine linkages at appropriate location throughout the chain. A first design consisted of placing these low dissociation energy bonds between each monomeric bit: while cleavage of this sole bond greatly simplified MS/MS spectra, efficient sequencing was limited to chains with up to about 50 units. In contrast, introduction of alkoxyamine bonds between each byte (i.e. a set of eight co‐monomers) was a more successful strategy. Long messages (so far, up to 8 bytes) could be read in MS³ experiments, where single‐byte containing fragments released during the first activation stage were further dissociated for sequencing. The whole sequence of such byte‐truncated poly(phosphodiester)s could be easily re‐constructed based on a mass tagging system which permits to determine the original location of each byte in the chain. Copyright © 2017 John Wiley & Sons, Ltd.     

Organoiron polymers containing azo dyes

The synthesis of cationic organoiron polymers with azobenzene moieties in their side chains has been accomplished via nucleophilic aromatic substitution and ring-opening metathesis polymerization (ROMP) reactions. Polyaromatic ethers and thioethers with azobenzene moieties in their side chains were functionalized with different chromophores to yield yellow-, orange- and red-colored polymers. Polynorbornenes with azobenzene-containing side chains were isolated following ROMP of their monomeric analogs. All of the organoiron polymers were soluble in polar organic solvents and underwent reversible electrochemical reduction processes. Photobleaching of the azobenzene-containing polymers was achieved in the presence of hydrogen peroxide. The metallated polymers had glass transition temperatures approximately 50 to 80°C higher than their organic analogs.     

RAFT polymerization of a novel allene‐derived asymmetrical divinyl monomer: A facile strategy to alkene‐functionalized hyperbranched vinyl polymers with high degrees of branching

Hyperbranched vinyl polymers with high degrees of branching (DBs) up to 0.43 functionalized with numerous pendent allene groups have been successfully prepared via reversible addition fragmentation chain transfer polymerization of a state‐of‐art allene‐derived asymmetrical divinyl monomer, allenemethyl methacrylate (AMMA). The gelation did not occur until high monomer conversions (above 90%), as a result of the optimized reactivity difference between the two vinyl groups in AMMA. The branched structure was confirmed by a combination of a triple‐detection size exclusion chromatography (light scattering, refractive index, and viscosity detectors) and detailed ¹H NMR analyses. A two‐step mechanism is proposed for the evolution of branching according to the dependence of molecular weight and DB on monomer conversion. Controlled radical polymerization proceeds until moderate conversions, mainly producing linear polymers. Subsequent initiation and propagation on the polymerizable allene side chains as well as the coupling of macromolecular chains generate numerous branches at moderate‐to‐high monomer conversions, dramatically increasing the molecular weight of the polymer. AMMA was also explored as a new branching agent to construct poly(methyl methacrylate)‐type hyperbranched polymers by its copolymerization with methyl methacrylate. The DB can be effectively tuned by the amount of AMMA, showing a linear increase trend. The pendent allene groups in the side chains of the copolymers were further functionalized by epoxidation and thiol‐ene chemistry in satisfactory yields. © 2013 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2013, 51, 2959–2969     

Synthesis,characterization, and electroluminescence properties of poly(fluorenevinylene benzobisthiazoles)

A series of vinylene‐linked copolymers based on electron‐deficient benzobisthiazole and electron‐rich fluorene moieties were synthesized via Horner–Wadsworth–Emmons polymerization. Three different polymers P1 , P2 , and P3 , were prepared bearing octyl, 3,7‐dimethyloctyl, and 2‐(2‐ethoxy)ethoxyethyl side chains, respectively. The polymers all possessed moderate molecular weights, good solubility in aprotic organic solvents, and high fluorescence quantum efficiencies in dilute solutions. P2 , which bore branched 3,7‐dimethyloctyl side chains, exhibited better solubility than the other polymers, but also exhibited the lowest thermal decomposition temperature of all polymers. Overall, the impact of the side chains on the polymers optical properties in solution was negligible as all three polymers gave similar absorption and emission spectra in both solution and film. Guest‐host light‐emitting diodes using dilute blends of the polymers in a poly(N‐vinylcarbazole) host gave blue‐green emission with P2 exhibiting the highest luminous efficiency, 0.61 Cd/A at ～500 nm. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2013     

Functional polythiiranes 7: Surface activity of polythiiranes with PEO side chains

 Some comb-like polythiiranes with PEO side chains were prepared from the corresponding macromonomers. These new materials are amphiphiles and act as surfactants. Their surface tension and interfacial tension are measured and studied in this paper on account of their structures. The lowering of surface tension measured in polymers bearing methyl terminal group in PEO side chains, are in the same range as these observed with polymers of identical structures but different main chains. An increase of the hydrophobic units in the main chain, obtained in copolymers with methylthiirane does not significantly modified the surface tensions. Better lowering is afforded with structures bearing large alkyl groups as terminal group of PEO side chains. On the contrary, some of these macro-molecules with an optimized EO content largely lower the water/xylene surface tension. The main interest of these new materials is their very low cmc and the stabilization of L₁-type microemulsions. Received: 20 May 1997 Accepted: 25 November 1997