Electron impact fragmentation mechanisms of some cyclic esters with helical structures

The electron impact mass spectra of several cyclic esters with helical structures have been studied. Their fragmentation pathways were proposed and confirmed by mass-analyzed ion kinetic energy (MIKE) and high-resolution data. In general, the dominant fragmentation pathways in the spectra of these compounds originate from a alpha-cleavage with loss of a hydrogen or methyl group. The difference between hydrogen and methyl group loss greatly affects the subsequent fragmentations. Although, due to their helicity, these cyclic esters are optically active no stereo-related fragmentation pathway was observed. Copyright 2000 John Wiley & Sons, Ltd.     

Tracing glycoprotein structures: electrospray ionization tandem mass spectrometric analysis of sugar-peptide adducts

Owing to the diversity of carbohydrate structures and their significance for the function of many biopolymers, structural analysis of various carbohydrate-related compounds is of great importance. Electrospray ionization tandem mass spectrometry (ESI-MS/MS) was used to establish the fragmentation behaviour of a range of sugar-peptide adducts as model compounds of widespread glycoprotein structures. The compounds used in this study were chosen to provide correlation of distinct fragment ions with specific structural differences, namely position and type of carbohydrate-peptide bond and structure of the sugar moiety. All compounds show N- and C-terminal sequence ions along with losses of up to three water molecules. Fructose-related Amadori compounds exhibit M + 78 modified N-terminal peptide fragment ions. Fragmentation of glucose-peptide esters is characterized by the sugar ring fragmentation. Additionally, under the ESI-MS conditions applied, the esters studied undergo intramolecular reaction giving cyclic sugar-peptide structures that can be traced by the presence of N-terminal peptide M + 42 adducts. Detailed analysis of cyclic fructose-related compound comprising structural features of both studied groups revealed a rich fragmentation pattern derived from amino acid residues and water molecules losses from [M - 2H(2)O + H](+) ion. Also, some interesting differences were found with respect to the nature of carbohydrate moieties.     

Gas chromatography-mass spectrometry and gas chromatography-tandem mass spectrometry of cyclic fatty acid monomers isolated from heated fats

The analysis of hydrogenated cyclic fatty acid monomers isolated from heated linseed and sunflower oils is achieved by gas chromatography-tandem mass spectrometry of their pentafluorobenzyl esters. Collisionally activated dissociation of the carboxylate anions produced by electron-capture ionization shows remote charge-site fragmentation that allows location of cyclopentane and cyclohexane rings by examining the resulting mass-analysed ion kinetic energy spectra. Oxidative ozonolysis of the methyl esters of the unsaturated cyclic fatty acid monomers allows location of some double bonds. However, preliminary results obtained with remote charge fragmentation of synthetic unsaturated models make this approach an alternative for double bond location in the cyclic fatty acid monomers isolated from heated fats.     

Die massenspektrometrische Fragmentierung von Neopentylpolyolestern. 1—Pentaerythrittetrafettsäureester

The fragmentation of the homologous fatty acid tetraesters of pentaerythritol (C-2 to C-14) upon electron impact was investigated. The main fragment ions are [M? RCOO]⁺ and [M? RCOOH]⁺, for which cyclic acetal structures are postulated. Subsequent fragmentation was elucidated by ‘direct analysis of daughter ion’ (DADI) measurements and high resolution measurements. Esters of branched fatty acids can be distinguished from esters of n-fatty acids by characteristic ions. Isomeric esters of n-fatty acids cannot be separated by gas chromatography but identification is also possible by mass spectrometry.     

Thermal and mass spectrometric fragmentation of esters of deuterated long chain carboxylic acids

A method combining thermal fragmentation and mass spectrometry for the determination of the position of double bonds in an unsaturated ester is presented. The thermal fragmentation of methyl esters of deuterated long chain carboxylic acids yields a homologous series of olefins plus a homologous series of unsaturated esters. The positions of the deuterium atoms in the original ester are revealed by the deuterium content of its fragments as determined by mass spectrometry. Therefore, the positions of double bonds of a polyunsaturated acid can be determined by pyrolysis after saturation by deuterium. The structures of the unsaturated fragments are ascertained by mass spectrometric method, and the formation of the ion [M – 32] in the mass spectrometric fragmentation of unsaturated methyl esters is studied by means of deuterium labeling.     

Electron ionization mass spectral fragmentation of C19 isoprenoid aldehydes and carboxylic acid methyl and trimethylsilyl esters

The electron ionization (EI) mass spectra of saturated and alpha,beta-unsaturated C(19) isoprenoid aldehydes and carboxylic acid methyl and trimethylsilyl esters are reported. Different pathways are proposed in order to explain the main fragmentations observed. The conjugated double bond migrates more or less readily before gamma-hydrogen rearrangement according to the structure of the considered compound. Configurations of the double bond of alpha,beta-unsaturated C(19) isoprenoid aldehydes and fatty acid methyl and trimethylsilyl esters can be easily determined thanks to the peaks at m/z 97, 127 and 185, respectively, which are much more abundant in the mass spectra of the Z isomers owing to the formation of a cyclic ion. In the case of trimethylsilyl esters, subsequent fragmentation of the cyclic ion at m/z 185 affords two other diagnostic ions at m/z 95 and 169.     

Mass-spectrometric and quantum-chemical study of fragmentation of diallyl esters of dicarboxylic acids

In a mechanistic study of thermal breakdown of diallyl polymers, six diallyl esters of dicarboxylic acids have been investigated by means of mass spectrometry. A characteristic feature of the fragmentation of these compounds is the low stability of the molecular ions and detachment of the allyl cation, the peak of which is usually the highest in the mass spectrum. In interpreting such an unusual path of fragmentation of esters, quantum-chemical calculations have been carried out in the MINDO/3 approximation; the preferred conformation of the diallyl maleate molecule and the distribution of electron density in this conformation have been determined, and the most stable cyclic structure of the intermediate cation [CH=CH(CO)₂OH]⁺ has been established. The nature of the bridge between the carboxyl groups in diallyl esters of dicarboxylic acids has practically no influence on the direction of fragmentation. The decisive factor in the fragmentation is the electrostatic interaction of charges on the atoms of carbonyl carbon and ester oxygen of the second carboxyl group. A fragmentation scheme with the formation of intermediate cyclic cations is proposed.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 26, No. 3, pp. 300–307, May–June, 1990.     

甲基取代的手性环酯化合物的螺旋结构与旋光性分析

利用螺旋片段判定规则,结合X射线衍射结构图及模型结构,对4个大环酯类化合物及甲基取代产物的螺旋结构与旋光性进行了定量分析,检测结果证明了理论分析的正确性;对旋光值变化规律给予了合理解释.     

MASS SPECTROMETRY OF SULFINAMIDES AND SULFINATE ESTERS

Abstract

The low resolution mass spectra of alkyl and aryl sulfinamides containing alkyl, cycloalkyl, aryl and cyclic amine functions were recorded and the major fragmentation modes were elucidated with the aid of metastable peaks. In addition, the behavior of a variety of sulfinate esters upon electron-impact was similarly established.     

Studies on pyrimidine derivatives. Michael addition of β-nitrostyrenes to substituted 6-aminouracils

A series of 5-(2-nitro-l-phenyl)ethyluracils were obtained when β-nitrostyrenes were reacted with 1,3-di-methyl-6-substituted uracil derivatives, instead of cyclic compounds. The structures of the compounds 5, 6 , and 7 were proved by spectroscopic methods and their mass fragmentation patterns are discussed.     

Separation and quantification of the linear and cyclic structures of polyamide-6 at the critical point of adsorption

The linear and cyclic structures of polyamide-6 were separated by liquid chromatography at critical conditions (LCCC) and identified with different mass spectrometric (MS) techniques and quantitated by LCCC with evaporative light-scattering detection (ELSD). Electrospray ionization MS was not suitable to identify the higher cyclic structures. For this purpose, matrix-assisted laser desorption ionization time-of-flight MS performed better and cyclic and linear structures were oligomerically resolved and separately identified in the mass spectrometer. The highest cyclic structure present and detected was the cyclic pentacontamer. It could be demonstrated that cyclic and linear oligomers follow different ionization and fragmentation routes/patterns. Quantification with ELSD of the components separated by LCCC using a universal calibration curve or an iterative procedure was developed. An area correction to account for different peak widths of coeluting components improves precision and accuracy of the calibration curve and improves quantitation accuracy for the samples analyzed. With these corrected values, no molecular mass dependency was observed for the cyclic and linear structures. Under critical conditions, the linear and cyclic structures of polyamide-6 were separated, identified and quantified.     

Insitu dehydro-oligomerization of castor oil,fatty acid ester into esters of dimer and oligomer acids over molybdenum oxide on silica-alumina catalyst

A process is described for the conversion of methylricinoleate, the major castor oil, fatty acid ester, directly into esters of dimer and oligomer acids by using molybdenum oxide on a silica–alumina catalyst. The dehydration of the methylricinoleate into a corresponding mixture of conjugated and nonconjugated olefins and the oligomerization reaction took place side by side in a continuous column, fixed-bed reactor. The products are characterized by IR, ¹H NMR, and MS. The fragmentation pattern in the mass spectrum of the dimeric species distilled from the mixture reveals that the product contains cyclic and acyclic isomeric structures. The mechanism of dimerization and oligomerization reactions to transition metal complexes and transition metal oxide catalyst systems is reviewed briefly and the possibility of a common mechanism for all similar systems is suggested. A general mechanism for oligomerization reactions to similar catalysts is proposed and the products of the present reaction are explained on the basis of the proposed mechanism.     

GC-MS investigation of α-polyfluoroalkylbenzyl phosphorus esters

The stereochemistry of some α-polyfluoroalkylbenzyl phosphorus esters has been studied by capillary gas chromatography (CGC). The compounds are mixtures of two or three diastereomers, depending on the number of asymmetric centers and the molecular symmetry. The primary fragmentation processes in the mass spectra of the phosphorus esters and their deuterated analogous have also been studied.     

The mass spectra of some benzyl esters and thioethers

The electron impact mass spectra of a large number of benzyl esters of carboxylic acids are reported. The fragmentation behaviour is discussed and the esters are divided into groups according to structure and fragmentation. For most esters benzylic cleavage with H transfer competes with simple cleavage.     

Cyclic and linear liquid crystalline functionalized polyesters with main-chain ortho-linked units. synthesis and characterization of cyclic lc unimers and dimers with “u”-shaped rigid mesogenic units with alkyl side chains

Although ortho-diphenols had not been extensively used in the synthesis of LC esters, a great variety of molecular structures of low and high molecular weight LC esters containing high proportions of these units can be synthesized. In this paper we describe the synthesis and characterization of new series of low and high molecular weight cyclic and linear LC esters with mesogenic “U”-shaped rigid units with terminal groups which are alkyl chains. Cyclic oligoesters and linear polyesters were formed by the polycondensation of 4,4'-[1,10-decamethylenebis(oxy)]bis(cinnamic acid) with monosubstituted catechols which are the alkyl esters of 3,4-dihydroxybenzoic acid. Although the great importance that concomitant cyclization reactions have in polyesterifications involving high proportions of ortho-diphenols does not seem to have been considered until now, we have found mat these polyesterifications produced linear polyesters along with high proportions of cyclic oligoesters even when reaction conditions disfavored cyclization. Copolymerization with p-hydroxybenzoic acid decreased the amount of cyclic oligomers, however it was necessary to copolymerize with proportions of PB higher than 50 mol-% to get copolyesters with low proportions of cyclic oligomers. As far as we know we describe the first examples of cyclic LC oligoesters and cyclic LC unimers and dimers which display enantiotropic LC mesophases stable over broad ranges of temperature. Cyclic dimers display mesophases whose isotropization temperatures ( > 300°C) are much higher than that of their linear high molecular mass homologues. Cyclic LC unimers and dimers, linear LC polyesters and model compounds were characterized by FAB-MS, GPC, ¹H NMR, DSC and hot-stage polarized microscopy. All these compounds contain reactive C=C double bonds and can be crosslinked thermally and photochemically. Cyclic unimers and dimers can be polymerized termally to produce high molecular mass polymers.     

Photodissociation spectroscopy of trapped protonated tryptophan

We have coupled a quadrupole ion trap with a frequency doubled optical parametric oscillator laser. The photodissociation spectrum of the protonated tryptophan ion from 215 to 320 nm is reported. The yields of fragmentation on each mass channel as a function of the laser wavelength were obtained. We also report experiments involving multiple stages of laser induced dissociation and discuss possible structures for the fragmentation products.     

Mass spectra of aliphatic dicarboxylic acids and their dimethyl esters: Cyclic structures for the [M − H2O]+˙ ions from the diacids and [M − MeOH]+˙ ions from the dimethyl esters

Methyl 2-oxocycIoalkane carboxylate structures are proposed lor the [M ? MeOH]^+˙ ions from dimethyl adipate, pimelate, suberate and azelate. This proposal is based on a comparison of the metastable ion mass spectra and the kinetic energy releases for the major fragmentation reaction of these species with the same data for the molecular ions of authentic cyclic β-keto esters. The mass spectra of α,α,α′,α′-d₄-pimelic acid and its dimethyl ester indicate that the α-hydrogens are involved only to a minor extent in the formation of [M ? ROH]^+˙ and [M ? 2ROH]^+˙ ions, while these α-hydrogens are involved almost exclusively in the loss of ROH from the [M ? RO˙]⁺ ions (R = H or CH₃). The molecules XCO(CH₂)₇COOMe (X = OH, Cl) form abundant ions in their mass spectra with the same structure as the [M ? 2MeOH]^+˙ ions from dimethyl azelate.     

Das massenspektroskopische fragmentierungsverhalten von hydroxy- und methoxyphenazincarbonsäuren und ihren methylestern

The mass spectroscopic fragmentation behacior of isomeric hydroxy- and methoxyphenazine-1-carboxylic acids (and their methyl esters) is discussed with repoect to a possible structure elucidation of polysubstituted compounds.     

Identification tree based on fragmentation rules for structure elucidation of organophosphorus esters by electrospray mass spectrometry

Organophosphorus compounds have played important roles as pesticides, chemical warfare agents and extractors of radioactive material. Structural elucidation of phosphonates poses a particular challenge because their initial forms can be hydrolyzed, thus, degradation products may predominate in samples acquired in the field. The analysis of non‐volatile organophosphorus compounds and their degradation products is possible using electrospray tandem mass spectrometry ESI‐MS/MS. Here, we present a generic strategy that allows the unambiguous identification of substituents for two families of organophosphorus compounds: the phosphonates and phosphates. General fragmentation rules were deduced based on the study of decomposition pathways of 55 organophosphorus esters, including examples found in the literature. Multistage MS (MSⁿ) experiments at high resolution in a hybrid mass spectrometer provide accurate mass measurements, whereas collision‐induced dissociation experiments in a triple quadrupole give access to small fragment ions. The creation of a specific nomenclature for each possible structure of organophosphorus compound, depending on the alkyl side chain linked to the oxygen, was achieved by applying these fragmentation rules. This led to the creation of an ‘identification tree’ based upon the unique consecutive decomposition pathways uncovered for each individual compound. Hence, seven structural motifs were created that orient an unequivocal identification using the ‘identification tree’. Despite the similar structures of the ensemble of phosphate and phosphonate esters, distinct identifications based upon characteristic neutral losses and diagnostic fragment ions were possible in all cases. Copyright © 2013 John Wiley & Sons, Ltd.     

The mass spectra of 1,2,4-triazine and some of its derivatives

The mass spectra of some esters of 1,2,4-triazine-3-carboxylic acid and of 1,2,4-triazine itself are reported, and their fragmentation patterns are analyzed. The syntheses of the methyl and of the t-butyl esters of 1,2,4-triazine-3-carboxylate are described.