Nonadditivity of methyl group in single‐electron hydrogen bond of methyl radical‐water complex

The nonadditivity of methyl group in the single‐electron hydrogen bond of the methyl radical‐water complex has been studied with quantum chemical calculations at the UMP2/6‐311++G(2df,2p) level. The bond lengths and interaction energies have been calculated in the four complexes: CH₃? H₂O, CH₃CH₂? H₂O, (CH₃)₂CH? H₂O, and (CH₃)₃C? H₂O. With regard to the radicals, tert‐butyl radical forms the strongest hydrogen bond, followed by iso‐propyl radical and then ethyl radical; methyl radical forms the weakest hydrogen bond. These properties exhibit an indication of nonadditivity of the methyl group in the single‐electron hydrogen bond. The degree of nonadditivity of the methyl group is generally proportional to the number of methyl group in the radical. The shortening of the C···H distance and increase of the binding energy in the (CH₃)₂CH? H₂O and (CH₃)₃C? H₂O complexes are less two and three times as much as those in the CH₃CH₂? H₂O complex, respectively. The result suggests that the nonadditivity among methyl groups is negative. Natural bond orbital (NBO) and atom in molecules (AIM) analyses also support such conclusions. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

CF3CH(ONO)CF3: Synthesis,IR spectrum,and use as OH radical source for kinetic and mechanistic studies

The synthesis, IR spectrum, and first‐principles characterization of CF₃CH(ONO)CF₃ as well as its use as an OH radical source in kinetic and mechanistic studies are reported. CF₃CH(ONO)CF₃ exists in two conformers corresponding to rotation about the RCO? NO bond. The more prevalent trans conformer accounts for the prominent IR absorption features at frequencies (cm^?1) of 1766 (N?O stretch), 1302, 1210, and 1119 (C? F stretches), and 761 (O? N? O bend); the cis conformer contributes a number of distinct weaker features. CF₃CH(ONO)CF₃ was readily photolyzed using fluorescent blacklamps to generate CF₃C(O)CF₃ and, by implication, OH radicals in 100% yield. CF₃CH(ONO)CF₃ photolysis is a convenient source of OH radicals in the studies of the yields of CO, CO₂, HCHO, and HC(O)OH products which can be difficult to measure using more conventional OH radical sources (e.g., CH₃ONO photolysis). CF₃CH(ONO)CF₃ photolysis was used to measure k(OH + C₂H₄)/k(OH + C₃H₆) = 0.29 ± 0.01 and to establish upper limits of 16 and 6% for the molar yields of CO and HC(O)OH from the reaction of OH radicals with benzene in 700 Torr of air at 296 K. © 2003 Wiley Periodicals, Inc. Int J Chem Kinet 35: 159–165, 2003     

Determination of the isomerization rate constant HOCH2CH2CH2CH(OO·)CH3 →HOC·HCH2CH2CH(OOH)CH3. Importance of intramolecular hydroperoxy isomerization in tropospheric chemistry

The rate constant of the title reaction is determined during thermal decomposition of di-n-pentyl peroxide C₅H₁₁O( )OC₅H₁₁ in oxygen over the temperature range 463–523 K. The pyrolysis of di-n-pentyl peroxide in O₂/N₂ mixtures is studied at atmospheric pressure in passivated quartz vessels. The reaction products are sampled through a micro-probe, collected on a liquid-nitrogen trap and solubilized in liquid acetonitrile. Analysis of the main compound, peroxide C₅H₁₀O₃, was carried out by GC/MS, GC/MS/MS [electron impact EI and NH₃ chemical ionization CI conditions]. After micro-preparative GC separation of this peroxide, the structure of two cyclic isomers (3S*,6S*)3α-hydroxy-6-methyl-1,2-dioxane and (3R*,6S*)3α-hydroxy-6-methyl-1,2-dioxane was determined from ¹H NMR spectra. The hydroperoxy-pentanal OHC( )(CH₂)₂( )CH(OOH)( )CH₃ is formed in the gas phase and is in equilibrium with these two cyclic epimers, which are predominant in the liquid phase at room temperature. This peroxide is produced by successive reactions of the n-pentoxy radical: a first one generates the CH₃C·H(CH₂)₃OH radical which reacts with O₂ to form CH₃CH(OO·)(CH₂)₃OH; this hydroxyperoxy radical isomerizes and forms the hydroperoxy HOC·H(CH₂)₂CH(OOH)CH₃ radical. This last species leads to the pentanal-hydroperoxide (also called oxo-hydroperoxide, or carbonyl-hydroperoxide, or hydroperoxypentanal), by the reaction HOC·H(CH₂)₂CH(OOH)CH₃+O₂→O()CH(CH₂)₂CH(OOH)CH₃+HO₂. The isomerization rate constant HOCH₂CH₂CH₂CH(OO·)CH₃→HOC·HCH₂CH₂CH(OOH)CH₃ (k₃) has been determined by comparison to the competing well-known reaction RO₂+NO→RO+NO₂ (k₇). By adding small amounts of NO (0–1.6×10¹⁵ molecules cm⁻³) to the di-n-pentyl peroxide/O₂/N₂ mixtures, the pentanal-hydroperoxide concentration was decreased, due to the consumption of RO₂ radicals by reaction (7). The pentanal-hydroperoxide concentration was measured vs. NO concentration at ten temperatures (463–523 K). The isomerization rate constant involving the H atoms of the CH₂( )OH group was deduced: or per H atom: The comparison of this rate constant to thermokinetics estimations leads to the conclusion that the strain energy barrier of a seven-member ring transition state is low and near that of a six-member ring. Intramolecular hydroperoxy isomerization reactions produce carbonyl-hydroperoxides which (through atmospheric decomposition) increase concentration of radicals and consequently increase atmospheric pollution, especially tropospheric ozone, during summer anticyclonic periods. Therefore, hydrocarbons used in summer should contain only short chains (<C₄) hydrocarbons or totally branched hydrocarbons, for which isomerization reactions are unlikely. © 1998 John Wiley & Sons, Inc. Int J Chem Kinet 30: 875–887, 1998     

The hydroxyl radical reaction rate constant and products of 3,5‐dimethyl‐1‐hexyn‐3‐ol

A bimolecular rate constant,k_DHO, of (29 ± 9) × 10^?12 cm³ molecule^?1 s^?1 was measured using the relative rate technique for the reaction of the hydroxyl radical (OH) with 3,5‐dimethyl‐1‐hexyn‐3‐ol (DHO, HC?CC(OH)(CH₃)CH₂CH(CH₃)₂) at (297 ± 3) K and 1 atm total pressure. To more clearly define DHO's indoor environment degradation mechanism, the products of the DHO + OH reaction were also investigated. The positively identified DHO/OH reaction products were acetone ((CH₃)₂C?O), 3‐butyne‐2‐one (3B2O, HC?CC(?O)(CH₃)), 2‐methyl‐propanal (2MP, H(O?)CCH(CH₃)₂), 4‐methyl‐2‐pentanone (MIBK, CH₃C(?O)CH₂CH(CH₃)₂), ethanedial (GLY, HC(?O)C(?O)H), 2‐oxopropanal (MGLY, CH₃C(?O)C(?O)H), and 2,3‐butanedione (23BD, CH₃C(?O)C(?O)CH₃). The yields of 3B2O and MIBK from the DHO/OH reaction were (8.4 ± 0.3) and (26 ± 2)%, respectively. The use of derivatizing agents O‐(2,3,4,5,6‐pentalfluorobenzyl)hydroxylamine (PFBHA) and N,O‐bis(trimethylsilyl)trifluoroacetamide (BSTFA) clearly indicated that several other reaction products were formed. The elucidation of these other reaction products was facilitated by mass spectrometry of the derivatized reaction products coupled with plausible DHO/OH reaction mechanisms based on previously published volatile organic compound/OH gas‐phase reaction mechanisms. © 2004 Wiley Periodicals, Inc. Int J Chem Kinet 36: 534–544, 2004     

α‐Halogenoacetanilides as Hydrogen‐Bonding Organocatalysts that Activate Carbonyl Bonds: Fluorine versus Chlorine and Bromine

α‐Halogenoacetanilides (X=F, Cl, Br) were examined as H‐bonding organocatalysts designed for the double activation of C?O bonds through NH and CH donor groups. Depending on the halide substituents, the double H‐bond involved a nonconventional C?H???O interaction with either a H?CX_n (n=1–2, X=Cl, Br) or a H?C_Ar bond (X=F), as shown in the solid‐state crystal structures and by molecular modeling. In addition, the catalytic properties of α‐halogenoacetanilides were evaluated in the ring‐opening polymerization of lactide, in the presence of a tertiary amine as cocatalyst. The α‐dichloro‐ and α‐dibromoacetanilides containing electron‐deficient aromatic groups afforded the most attractive double H‐bonding properties towards C?O bonds, with a N?H???O???H?CX₂ interaction.     

Isomer‐dependent reaction mechanisms of cyclic ether intermediates: cis‐2,3‐dimethyloxirane and trans‐2,3‐dimethyloxirane

Oxiranes are a class of cyclic ethers formed in abundance during low‐temperature combustion of hydrocarbons and biofuels, either via chain‐propagating steps that occur from unimolecular decomposition of β‐hydroperoxyalkyl radicals (β‐?QOOH) or from reactions of H?O with alkenes. The cis‐ and trans‐isomers of 2,3‐dimethyloxirane are intermediates of n‐butane oxidation, and while rate coefficients for β‐?QOOH → 2,3‐dimethyloxirane + ?OH are reported extensively, subsequent reaction mechanisms of the cyclic ethers are not. As a result, chemical kinetics mechanisms commonly adopt simplified chemistry to describe the consumption of 2,3‐dimethyloxirane by convoluting several elementary reactions into a single step, which may introduce mechanism truncation error—uncertainty derived from missing or incomplete chemistry. The present research examines the isomer dependence of 2,3‐dimethyloxirane reaction mechanisms in support of ongoing efforts to minimize mechanism truncation error. Reaction mechanisms are inferred via the detection of products from Cl‐initiated oxidation of both cis‐2,3‐dimethyloxirane and trans‐2,3‐dimethyloxirane using multiplexed photoionization mass spectrometry (MPIMS). The experiments were conducted at 10 Torr and temperatures of 650 K and 800 K. To complement the experiments, the enthalpies of stationary points on the ?R + O₂ surfaces were computed at the ccCA‐PS3 level of theory. In total, 28 barrier heights were computed on the 2,3‐dimethyloxiranylperoxy surfaces. Two notable aspects are low‐lying pathways that form resonance‐stabilized ketohydroperoxide‐type radicals caused by ?QOOH ring‐opening when the unpaired electron is localized adjacent to the ether group, and cis‐trans isomerization of ?R and ?QOOH radicals, via inversion, which enable reaction pathways otherwise restricted by stereochemistry. Several species were identified in the MPIMS experiments from ring opening of 2,3‐dimethyloxiranyl radicals. Neither of the two conjugate alkene isomers prototypical of ?R + O₂ reactions were detected. Products were also identified from decomposition of ketohydroperoxide‐type radicals. The present work provides the first analysis of 2,3‐dimethyloxirane oxidation chemistry and reveals that consumption pathways are complex and require the expansion of submechanisms in chemical kinetics mechanisms.     

3,3′‐Seleno­bis­(propionic acid)

In contrast to Se[CH₂C(O)OH]₂versus S[CH₂C(O)OH]₂, the title compound, Se[CH₂CH₂C(O)OH]₂ or C₆H₁₀O₄Se, is structurally quite similar to its sulfur analogue. The mol­ecule has twofold symmetry. The C—Se—C bond angle is 96.48 (8)° and the Se—C bond lengths are 1.9610 (14) Å. The shortest Se?O intermolecular distance is 3.5410 (11) Å. The O?O distances in the carboxyl­ic acid dimers are 2.684 (2) Å. The temperature dependence of the IR spectrum suggests tautomerism in the solid state.     

Mechanism for the gas‐phase reaction between OH and 3‐methylfuran: A theoretical study

The mechanism for the OH + 3‐methylfuran reaction has been studied via ab initio calculations to investigate various reaction pathways on the doublet potential energy surface. Optimizations of the reactants, products, intermediates, and transition structures are conducted using the MP2 level of theory with the 6‐311G(d,p) basis set. The single‐point electronic energy of each optimized geometry is refined with G3MP2 and G3MP2B3 calculations. The theoretical study suggests that the OH + 3‐methylfuran reaction is dominated by the formation of HC(O)CH?C(CH₃)CHOH (P7) and CH(OH)CH?C(CH₃)C(O)H (P9), formed from two low‐lying adducts, IM1 and IM2. The direct hydrogen abstraction pathways and the S_N2 reaction may play a minor or negligible role in the overall reaction of OH with 3‐methylfuran. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Axial Ligand and Spin‐State Influence on the Formation and Reactivity of Hydroperoxo–Iron(III) Porphyrin Complexes

The present study focuses on the formation and reactivity of hydroperoxo–iron(III) porphyrin complexes formed in the [Fe^III(tpfpp)X]/H₂O₂/HOO^? system (TPFPP=5,10,15,20‐tetrakis(pentafluorophenyl)‐21H,23H‐porphyrin; X=Cl^? or CF₃SO₃^?) in acetonitrile under basic conditions at ?15 °C. Depending on the selected reaction conditions and the active form of the catalyst, the formation of high‐spin [Fe^III(tpfpp)(OOH)] and low‐spin [Fe^III(tpfpp)(OH)(OOH)] could be observed with the application of a low‐temperature rapid‐scan UV/Vis spectroscopic technique. Axial ligation and the spin state of the iron(III) center control the mode of O? O bond cleavage in the corresponding hydroperoxo porphyrin species. A mechanistic changeover from homo‐ to heterolytic O? O bond cleavage is observed for high‐ [Fe^III(tpfpp)(OOH)] and low‐spin [Fe^III(tpfpp)(OH)(OOH)] complexes, respectively. In contrast to other iron(III) hydroperoxo complexes with electron‐rich porphyrin ligands, electron‐deficient [Fe^III(tpfpp)(OH)(OOH)] was stable under relatively mild conditions and could therefore be investigated directly in the oxygenation reactions of selected organic substrates. The very low reactivity of [Fe^III(tpfpp)(OH)(OOH)] towards organic substrates implied that the ferric hydroperoxo intermediate must be a very sluggish oxidant compared with the iron(IV)–oxo porphyrin π‐cation radical intermediate in the catalytic oxygenation reactions of cytochrome P450.     

Computational studies on the reactions of 3‐butenyl and 3‐butenylperoxy radicals

The reactions of 3‐butenyl (^?CH₂CH₂CH?CH₂) radicals—unimolecular decomposition, isomerization, as well as reaction with O₂—and the subsequent unimolecular rearrangement reactions of the 3‐butenylperoxy radicals have been investigated and are compared to the analogous reactions of butyl (^?CH₂CH₂CH₂CH₃) and butylperoxy radicals using transition‐state theory based on the quantum chemical calculations at the CBS‐QB3 level. For alkyl‐analogue processes, the reactions of 3‐butenyl and 3‐butenylperoxy radicals can be well characterized by the decreased and increased bond dissociation energies at the allylic and vinylic sites, respectively. The intramolecular addition reactions of the radical center atoms to the double bonds were found to be important non‐alkyl‐analogue reactions of 3‐butenyl and 3‐butenylperoxy radicals. As a consequence, the thermal decomposition of 3‐butenyl radicals was found to be slower than that of butyl radicals by one order of magnitude at temperature near 1000 K. Intramolecular addition reactions are suggested to be the predominant unimolecular rearrangement processes of 3‐butenylperoxy radicals over the entire temperature range investigated (500–1200 K). The intramolecular addition reactions of the alkenyl peroxy radicals, which have not been included in combustion kinetic models, and their implications for the autoignition of alkenes are discussed. © 2010 Wiley Periodicals, Inc. Int J Chem Kinet 42: 273–288, 2010     

Electron spin resonance of γ-irradiated poly(ethylene 2,6-naphthalene dicarboxylate)

The two types of radicals trapped in γ-irradiated poly(ethylene 2,6-naphthalene dicarboxylate) (PEN 2,6) have been identified by ESR as ? O? CH? CH₂? O? (radical I) and a radical located on the naphthalene ring (radical II). The relative concentrations of radicals in the gross polymer are 10–20% radical I and 80–90% radical II. Similar trapped radicals have been identified in γ-irradiated poly(ethylene terephthalate) (PET), a structurally related polymer which differs only in the aromatic moiety, but the relative radical concentrations are quite different. These results are discussed in relation to the radiation resistance of the two polymers.     

4‐Ethoxycarbonyl‐3‐hydroxy‐3‐phenylcyclohexanone

The title compound, ethyl 2‐hydroxy‐4‐oxo‐2‐phenyl­cyclo­hexane­carboxyl­ate, C₁₅H₁₈O₄, was obtained by a Michael–Aldol condensation and has the cyclo­hexanone in a chair conformation. The attached hydroxy, ethoxy­carbonyl and phenyl groups are disposed in β‐axial, β‐equatorial and α‐­equatorial configurations, respectively. An intermolecular hydrogen bond, with an O?O distance of 2.874 (2) Å, links the OH group and the ring carbonyl. Weak intermolecular C—H?O=C (ester and ketone), O—H?O=C (ketone) and C—H?OH hydrogen bonds exist.     

Atmospheric chemistry of CF3CH=CH2 and C4F9CH=CH2: products of the gas-phase reactions with Cl atoms and OH radicals

FTIR-smog chamber techniques were used to study the products of the Cl atom and OH radical initiated oxidation of CF3CH=CH2 in 700 Torr of N2/O2, diluent at 296 K. The Cl atom initiated oxidation of CF3CH=CH2 in 700 Torr of air in the absence of NOx gives CF3C(O)CH2Cl and CF3CHO in yields of 70+/-5% and 6.2+/-0.5%, respectively. Reaction with Cl atoms proceeds via addition to the >C=C< double bond (74+/-4% to the terminal and 26+/-4% to the central carbon atom) and leads to the formation of CF3CH(O)CH2Cl and CF3CHClCH2O radicals. Reaction with O2 and decomposition via C-C bond scission are competing loss mechanisms for CF3CH(O)CH2Cl radicals, kO2/kdiss=(3.8+/-1.8)x10(-18) cm3 molecule-1. The atmospheric fate of CF3CHClCH2O radicals is reaction with O2 to give CF3CHClCHO. The OH radical initiated oxidation of CxF2x+1CH=CH2 (x=1 and 4) in 700 Torr of air in the presence of NOx gives CxF2x+1CHO in a yield of 88+/-9%. Reaction with OH radicals proceeds via addition to the >C=C< double bond leading to the formation of CxF2x+1C(O)HCH2OH and CxF2x+1CHOHCH2O radicals. Decomposition via C-C bond scission is the sole fate of CxF2x+1CH(O)CH2OH and CxF2x+1CH(OH)CH2O radicals. As part of this work a rate constant of k(Cl+CF3C(O)CH2Cl)=(5.63+/-0.66)x10(-14) cm3 molecule-1 s-1 was determined. The results are discussed with respect to previous literature data and the possibility that the atmospheric oxidation of CxF2x+1CH=CH2 contributes to the observed burden of perfluorocarboxylic acids, CxF2x+1COOH, in remote locations.     

Molecular and Crystal Structures of TeCl4-Allylalcohol and -Allylacetate Adducts

1,2-electrophilic addition of TeCl₄ to the C=C bond of allylalcohol is observed, while with allylacetate, 1,3-addition occurs, due to migration of the acetate group. The allylalcohol adduct comprises two different kinds of molecules in the solid state, Cl₃Te[CH₂CH(Cl)CH₂OH→] and Cl₂Te[CH₂CH(Cl)CH₂CH-], with dative Te←O and covalent Te-O bonds, five-membered ring structures and Cl-Te?Cl and O-H?O bridges linking the different molecules. In the allylacetate adduct, Cl₃Te[CH₂CH(CH₂Cl)OC(CH₃)=O→], a six-membered ring is formed via an intramolecular dative Te←O interaction, the molecules being linked via C-Cl?Te bridges. Multinuclear NMR spectroscopy and ¹H-¹H-NOESY combined with ab initio (MP2/LANL2DZP) geometry optimisation show the geometry of the ring structures in solution to be similar to those in the solid state.     

Theoretical study on the reaction of (Z)‐CF3CHCHCF3 with OH radicals

The mechanism on the OH‐initiated atmospheric oxidation reaction of (Z)‐CF₃CH?CHCF₃ with and without O₂/NO has been investigated theoretically. The electronic structure information of the potential energy surface was obtained at the M06‐2X/aug‐cc‐pVDZ level, and the single‐point energies were refined by MCG3/3 method. The calculations show that the (Z)‐CF₃CH?CHCF₃ + OH reaction occurs via addition‐elimination mechanism, leading to products CF₃ and CF₃CH?CH(OH), rather than H‐abstraction mechanism at low temperature. Under atmospheric condition, the OH‐addition intermediate is likely to react rapidly with O₂/NO, and the likely products are CF₃C(O)H, CF₂(O), CF₃CH(OH)CH(O), FNO, and HO₂, as is proposed by experiment. © 2013 Wiley Periodicals, Inc.     

Reactions of stabilized criegee intermediates from the gas‐phase reactions of O3 with selected alkenes

The gas‐phase reactions of O₃ with 1‐octene, trans‐7‐tetradecene, 1,2‐dimethyl‐1‐cyclohexene, and α‐pinene have been studied in the presence of an OH radical scavenger, primarily using in situ atmospheric pressure ionization tandem mass spectrometry (API‐MS), to investigate the products formed from the reactions of the thermalized Criegee intermediates in the presence of water vapor and 2‐butanol (1‐octene and trans‐7‐tetradecene forming the same Criegee intermediate). With H₃O⁺(H₂O)_n as the reagent ions, ion peaks at 149 u ([M + H]⁺) were observed in the API‐MS analyses of the 1‐octene and trans‐7‐tetradecene reactions, which show a neutral loss of 34 u (H₂O₂) and are attributed to the α‐hydroxyhydroperoxide CH₃(CH₂)₅CH(OH)OOH, which must therefore have a lifetime with respect to decomposition of tens of minutes or more. No evidence for the presence of α‐hydroxyhydroperoxides was obtained in the 1,2‐dimethyl‐1‐cyclohexene or α‐pinene reactions, although the smaller yields of thermalized Criegee intermediates in these reactions makes observation of α‐hydroxyhydroperoxides from these reactions less likely than from the 1‐octene and trans‐7‐tetradecene reactions. Quantifications of 2,7‐octanedione from the 1,2‐dimethyl‐1‐cyclohexene reactions and of pinonaldehyde from the α‐pinene reactions were made by gas chromatographic analyses during reactions with cyclohexane and with 2‐butanol as the OH radical scavenger. The measured yields of 2,7‐octanedione from 1,2‐dimethyl‐1‐cyclohexene and of pinonaldehyde from α‐pinene were 0.110 ± 0.020 and 0.164 ± 0.029, respectively, and were independent of the OH radical scavenger used. Reaction mechanisms are presented and discussed. © 2001 Wiley Periodicals, Inc. Int J Chem Kinet 34: 73–85, 2002     

Radical Stability Directs Electron Capture and Transfer Dissociation of β‐Amino Acids in Peptides

We report on the characteristics of the radical‐ion‐driven dissociation of a diverse array of β‐amino acids incorporated into α‐peptides, as probed by tandem electron‐capture and electron‐transfer dissociation (ECD/ETD) mass spectrometry. The reported results demonstrate a stronger ECD/ETD dependence on the nature of the amino acid side chain for β‐amino acids than for their α‐form counterparts. In particular, only aromatic (e.g., β‐Phe), and to a substantially lower extent, carbonyl‐containing (e.g., β‐Glu and β‐Gln) amino acid side chains, lead to N? C_β bond cleavage in the corresponding β‐amino acids. We conclude that radical stabilization must be provided by the side chain to enable the radical‐driven fragmentation from the nearby backbone carbonyl carbon to proceed. In contrast with the cleavage of backbones derived from α‐amino acids, ECD of peptides composed mainly of β‐amino acids reveals a shift in cleavage priority from the N? C_β to the C_α? C bond. The incorporation of CH₂ groups into the peptide backbone may thus drastically influence the backbone charge solvation preference. The characteristics of radical‐driven β‐amino acid dissociation described herein are of particular importance to methods development, applications in peptide sequencing, and peptide and protein modification (e.g., deamidation and isomerization) analysis in life science research.     

Conformational Analysis of the 1,3‐Oxaphosphorinanes Formed from α,β‐Unsaturated Aldehydes and the (Hydroxymethyl)phosphines RP(CH2OH)2 (R = Ph or CH2OH)

Equimolar reactions of cinnamaldehyde or its 3,5‐dimethoxy‐4‐hydroxy derivative (sinapaldehyde) with RP(CH₂OH)₂ (R = Ph or CH₂OH) were studied in MeOH or CD₃OD at room temperature by NMR spectroscopy. In MeOH, nucleophilic attack of the phosphine at the C?C bond, with concomitant loss of CH₂O, affords the tertiary phosphine HOCH₂P(R)CH(Ar)CH₂CHO ( 3 ) that rapidly converts mainly into a 1,3‐oxaphosphorinane derivative ( 5 ) formed as a mixture of four diastereomers. Conformational analysis reveals that the Ar group in these is exclusively in an equatorial position while the OH and R groups can be equatorial‐oriented or axial‐oriented. In CD₃OD, 1,3‐oxaphosphorinanes monodeuterated in the C5 position are obtained as a mixture of eight diastereomers where the dominate diastereomers have an axial D‐atom. Diastereomeric ratios depend on the nature of the Ar and R groups.     

Insight into selected reactions in low-temperature dimethyl ether combustion from Born-Oppenheimer molecular dynamics

Dimethyl ether is under consideration as an alternative diesel fuel. Its combustion chemistry is as yet ill-characterized. Here we use Born-Oppenheimer molecular dynamics (BOMD) based on DFT-B3LYP forces to investigate the short-time dynamics of selected features of the low-temperature dimethyl ether (DME) oxidation potential energy surface. Along the chain propagation pathway, we run BOMD simulations from the transition state involving the decomposition of (*)CH(2)OCH(2)OOH to two CH(2)=O and an (*)OH radical. We predict that formaldehyde C-O stretch overtones are excited, consistent with laser photolysis experiments. We also predict that O-H overtones are excited for the (*)OH formed from (*)CH(2)OCH(2)OOH dissociation. We also investigate short-time dynamics involved in chain branching. First, we examine the isomerization transition state of (*)OOCH(2)OCH(2)OOH --> HOOCH(2)OCHOOH. The latter species is predicted to be a short-lived metastable radical that decomposes within 500 fs to hydroperoxymethyl formate (HPMF; HOOCH(2)OC(=O)H) and the first (*)OH of chain branching. The dissociation of HOOCH(2)OCHOOH exhibits non-RRKM behavior in its lifetime profile, which may be due to conformational constraints or slow intramolecular vibrational energy transfer (IVR) from the nascent H-O bond to the opposite end of the radical, where O-O scission occurs to form HPMF and (*)OH. In a few trajectories, we see HOOCH(2)OCHOOH recross back to (*)OOCH(2)OCH(2)OOH because the isomerization is endothermic, with only an 8 kcal/mol barrier to recrossing. Therefore, some inhibition of chain-branching may be due to recrossing. Second, trajectories run from the transition state leading to the direct decomposition of HPMF (an important source of the second (*)OH radical in chain branching) to HCO, (*)OH, and HC(=O)OH show that these products can recombine to form many other possible products. These products include CH(2)OO + HC(=O)OH, H(2)O + CO + HC(=O)OH, HC(=O)OH + HC(=O)OH, and HC(=O)C(=O)H + H(2)O, which (save CH(2)OO + HC(=O)OH) are all more thermodynamically stable than the original HCO + (*)OH + HC(=O)OH products. Moreover, the multitude of extra products suggest that standard statistical rate theories cannot completely describe the reaction kinetics of significantly oxygenated compounds such as HPMF. These secondary products consume the second (*)OH required for explosive combustion, suggesting an inhibition of DME fuel combustion is likely.