Qualitative and quantitative analysis of oxytetracycline by near-infrared spectroscopy

Near-infrared (NIR) spectroscopy, in combination with chemometrics, enable the analysis of raw materials without time-consuming sample preparation methods. The aim of our work was to estimate critical parameters in the analytical specification of oxytetracycline, and consequently the development of a method for quantification and qualification of these parameters by NIR spectroscopy. A Karl Fischer (K.F.) titration to determine the water content, a colorimetric assay method, and Fourier transform-infrared (FT-IR) spectroscopy to identify the oxytetracycline base, were used as reference methods, respectively. Multivariate calibration was performed on NIR spectral data using principal component analysis (PCA), partial least-squares (PLS 1) and principal component regression (PCR) chemometric methods. Multivariate calibration models for NIR spectroscopy have been developed. Using PCA and the Soft Independent Modelling of Class Analogy (SIMCA) approach, we established the cluster model for the determination of sample identity. PLS 1 and PCR regression methods were applied to develop the calibration models for the determination of water content and the assay of the oxytetracycline base. Comparing the PLS and PCR regression methods we found out that the PLS is better established by NIR, especially as the spectroscopic data (NIR spectra) are highly collinear and there are many wavelengths due to non-selective wavelengths. The calibration models for NIR spectroscopy are convenient alternatives to the colorimetric method and to the K.F. method, as well as to FT-IR spectroscopy, in the routine control of incoming material.     

Rapid qualitative and quantitative evaluation of deer antler (Cervus elaphus) using near-infrared reflectance spectroscopy

Near-infrared (NIR) spectroscopy has been applied for both the qualitative and quantitative evaluation of the velvet deer antler. The most important parameters of determining the quality of velvet antler are the habitat (the country of origin) and ash content. Conventionally, the habitat is determined by examining the appearance of samples (by human eye), which lacks objectivity. Ash content is measured by an ignition method (measurement ash residue), however, it is too slow (4–5 h) to be used for rapid at-site measurement. Velvet antlers from three different habitats (China, New Zealand, and Russia), albeit the same species of Cervus elaphus, were evaluated in this paper. Soft independence modeling of class analogies (SIMCA) and partial least squares (PLS) were used for classification of habitat and determination of ash content. The habitat was successfully identified with over 80% accuracy, and the ash content prediction result using PLS regression showed good correlation with the reference ignition method with a standard error of prediction (SEP) of 1.264%.     

Discrimination of Polygoni Multiflori radix and Cynanchi Auriculati radix using ultra‐high performance liquid chromatography fingerprints and chemical pattern recognition

In this work, a strategy was proposed to discriminate Polygoni Multiflori Radix (PMR) and its adulterant (Cynanchi Auriculati Radix, CAR). Ultra‐high performance liquid chromatography (UHPLC) fingerprints were established to analyze samples containing PMR, CAR and mixtures simultaneously. Multivariate classification methods were applied to analyze the obtained UHPLC fingerprints, including principal component analysis (PCA), partial least square discriminant analysis (PLS‐DA), soft independent modeling of class analogy (SIMCA), support vector machine discriminant analysis (SVMDA) and counter‐propagation artificial neural network (CP‐ANN). A plot of PCA score showed that PMR and CAR samples belonged to separate clusters (PMR class and CAR class), and samples of mixtures were located near PMR or CAR classes. Analysis by PLS‐DA, SVMDA and CP‐ANN performed well for recognition and prediction in terms of PMR and CAR samples. Moreover, the PLS‐DA method performed best in the detection of adulterated samples, even if the adulterant was about 25%.     

Classification and determination of total protein in milk powder using near infrared reflectance spectrometry and the successive projections algorithm for variable selection

This paper proposes a methodology for the classification and determination of total protein in milk powder using near infrared reflectance spectrometry (NIRS) and variable selection. Two brands of milk powder were acquired from three Brazilian cities (Natal-RN, Salvador-BA and Rio de Janeiro-RJ). The protein content of 38 samples was determined by the Kjeldahl method and NIRS analysis. Principal component regression (PCR) and partial least squares (PLS) multivariate calibrations were used to predict the total protein. Soft independent modeling of class analogy (SIMCA) was also used for full-spectrum classification, resulting in almost 100% classification accuracy, regardless of the significance level adopted for the F-test. Using this strategy, it was feasible to classify powder milk rapidly and nondestructively without the need for various analytical determinations. Concerning the multivariate calibration models, the results show that PCR, PLS and MLR-SPA models are good for predicting total protein in powder milk; the respective root mean square errors of prediction (RMSEP) were 0.28 (PCR), 0.25 (PLS), 0.11 wt% (MLR-SPA) with an average sample protein content of 8.1 wt%. The results obtained in this investigation suggest that the proposed methodology is a promising alternative for the determination of total protein in milk powder.     

Comparison of PLS1-DA, PLS2-DA and SIMCA for classification by origin of crude petroleum oils by MIR and virgin olive oils by NIR for different spectral regions

This study compares results obtained with several chemometric methods: SIMCA, PLS2-DA, PLS2-DA with SIMCA, and PLS1-DA in two infrared spectroscopic applications. The results were optimized by selecting spectral ranges containing discriminant information. In the first application, mid-infrared spectra of crude petroleum oils were classified according to their geographical origins. In the second application, near-infrared spectra of French virgin olive oils were classified in five registered designations of origins (RDOs). The PLS-DA discrimination was better than SIMCA in classification performance for both applications. In both cases, the PLS1-DA classifications give 100% good results. The encountered difficulties with SIMCA analyses were explained by the criteria of spectral variance. As a matter of fact, when the ratio between inter-spectral variance and intra-spectral variance was close to the F_c (Fisher criterion) threshold, SIMCA analysis gave poor results. The discrimination power of the variable range selection procedure was estimated from the number of correctly classified samples.     

偏最小二乘法在红外光谱识别茶叶中的应用

采用漫反射傅立叶变换红外光谱(FTIR)法结合主成分分析(PCA)、偏最小二乘法(PLS)、簇类的独立软模式(SIMCA)识别法对十三种茶叶进行了分类判别研究。研究结果表明,通过多元散射校正(MSC)对原始光谱进行预处理,可以提高模式识别技术的分类判别效果。在此基础上,选取1 900~900 cm-1波长范围内的茶叶红外光谱建立识别模型,三种方法都得到了满意的分类判别效果。在对检验集中全部130个样本的判别中,PCA仅有两类样本无法判别,SIMCA的识别率和拒绝率都在90%以上,而PLS的识别效果最佳,全部样本都得到了正确的归类。这一研究结果表明傅立叶变换红外光谱法与化学计量学方法相结合可以实现茶叶品种的快速鉴别,这为茶叶的客观评审提供了一种新思路。     

Classification of commercial apple beverages using a minimum set of mid-IR wavenumbers selected by Procrustes rotation

When infrared spectral data are used in classification and/or multivariate regression methods there can be problems related to both chemical understanding and computation speed due to the large number of wavenumbers in each spectrum. Here, it is shown that the Procrustes rotation technique can be used to select a minimum set of spectral variables (wavenumbers) to perform classification and regression. Procrustes rotation was coupled to several multivariate methods as PLS, SIMCA and potential curves (a maximum likelihood classification method). The practical problem of implementing a screening methodology for classifying apple juice-based beverages according to their contents of "pure" apple juice was addressed using attenuated total reflectance, mid-IR spectroscopy. It is found that two of the original wavenumbers are almost as good predictors as all the 176 initial ones.     

Multivariate quality control solved by one‐class partial least squares regression: identification of adulterated peanut oils by mid‐infrared spectroscopy

The Partial least squares class model (PLSCM) was recently proposed for multivariate quality control based on a partial least squares (PLS) regression procedure. This paper presents a case study of quality control of peanut oils based on mid‐infrared (MIR) spectroscopy and class models, focusing mainly on the following aspects: (i) to explain the meanings of PLSCM components and make comparisons between PLSCM and soft independent modeling of class analogy (SIMCA); (ii) to correct the estimation of the original PLSCM confidence interval by considering a nonzero intercept term for center estimation; (iii) to investigate the potential of MIR spectroscopy combined with class models for identifying peanut oils with low doping concentrations of other edible oils. It is demonstrated that PLSCM is actually different from the ordinary PLS procedure, but it estimates the class center and class dispersion in the framework of a latent variable projection model. While SIMCA projects the original variables onto a few dimensions explaining most of the data variances, PLSCM components consider simultaneously the explained variances and the compactness of samples belonging to the same class. The analysis results indicate PLSCM is an intuitive and easy‐to‐use tool to tackle one‐class problems and has comparable performance with SIMCA. The advantages of PLSCM might be attributed to the great success and well‐established foundations of PLS. For PLSCM, the optimization of model complexity and estimation of decision region can be performed as in multivariate calibration routines. Copyright © 2011 John Wiley & Sons, Ltd.     

A PLS-based extractive spectrophotometric method for simultaneous determination of carbamazepine and carbamazepine-10,11-epoxide in plasma and comparison with HPLC

Carbamazepine (CBZ) undergoes enzyme biotransformation through epoxidation with the formation of its metabolite, carbamazepine-10,11-epoxide (CBZE). A simple chemometrics-assisted spectrophotometric method has been proposed for simultaneous determination of CBZ and CBZE in plasma. A liquid extraction procedure was operated to separate the analytes from plasma, and the UV absorbance spectra of the resultant solutions were subjected to partial least squares (PLS) regression. The optimum number of PLS latent variables was selected according to the PRESS values of leave-one-out cross-validation. A HPLC method was also employed for comparison. The respective mean recoveries for analysis of CBZ and CBZE in synthetic mixtures were 102.57 (+/-0.25)% and 103.00 (+/-0.09)% for PLS and 99.40 (+/-0.15)% and 102.20 (+/-0.02)%. The concentrations of CBZ and CBZE were also determined in five patients using the PLS and HPLC methods. The results showed that the data obtained by PLS were comparable with those obtained by HPLC method.     

Alternative common bases and signal compression for wavelets application in chemometrics

Representation or compression of data sets in the wavelet space is usually performed to retain the maximum variance of the original or pretreated data, like in the compression by means of principal components. In order to represent together a number of objects in the wavelet space, a common basis is required, and this common basis is usually obtained by means of the variance spectrum or of the variance wavelet tree. In this study, the use of alternative common bases is suggested, both for classification and regression problems. In the case of classification or class-modeling, the suggested common bases are based on the spectrum of the Fisher weights (a measure of the between-class to within-class variance ratio) or on the spectrum of the SIMCA discriminant weights. In the case of regression, the suggested common bases are obtained by the correlation spectrum (the correlation coefficients of the predictor variables with a response variable) or by the PLS (Partial Least Squares regression) importance of the predictors (the product between the absolute value of the regression coefficient of the predictor in the PLS model and its standard deviation). Other alternative strategies apply the Gram–Schmidt supervised orthogonalization to the wavelet coefficients. The results indicate that, both in classification and regression, the information retained after compression in the wavelets space can be more efficient than that retained with a common basis obtained by variance.     

Canonical partial least squares—a unified PLS approach to classification and regression problems

We propose a new data compression method for estimating optimal latent variables in multi‐variate classification and regression problems where more than one response variable is available. The latent variables are found according to a common innovative principle combining PLS methodology and canonical correlation analysis (CCA). The suggested method is able to extract predictive information for the latent variables more effectively than ordinary PLS approaches. Only simple modifications of existing PLS and PPLS algorithms are required to adopt the proposed method. Copyright © 2009 John Wiley & Sons, Ltd.     

构建支持向量机-偏最小二乘法为药物构效关系建模

为研究药物构效关系积累样本数据的过程中,需为小样本建模。此时较易造成过拟合,影响模型的预测性能和稳定性。为此可用偏最小二乘(PLS)法从样本数据中成对地提取最优成分,消除自变量间的复共线性,并有效的降维,然后应用最小二乘支持向量机对成对成分进行非线性回归,并以基于误差修正的策略调整,使之更有效地表达自、因变量间的非线性关系。由此构建为EB-LSSVM-PLS算法,所建模型的预报精度高,稳定性良好。将其应用于新型黄烷酮类衍生物的QSAR建模,效果令人满意,其泛化性能优于其它方法。     

Determination of gadolinium in geological samples by inductively coupled plasma mass spectrometry and multivariate calibration

Gadolinium can be difficult to determine by ICP-MS. In a normal geological sample there are risks of spectroscopic interferences on all of its isotopes. In this study this problem has been solved by using partial least squares (PLS) regression. Two PLS models are investigated: the first is based on aqueous standards, and the second on reference materials. Both models are capable of determining Gd with good results in reference materials containing interfering elements. It was not necessary to correct for nonspectroscopic matrix interferences. PLS is compared to principal components regression (PCR), another multivariate calibration method. For the aqueous standards PLS leads to a simpler model, while similar results are obtained for the two methods in the model based on reference materials.     

Comparison of two vibrational procedures for the direct determination of mancozeb in agrochemicals

The direct determination of mancozeb in agrochemicals has been made by diamond attenuated total reflectance (ATR) Fourier transform infrared spectroscopy in the middle range (DATR-MIR) and diffuse reflectance infrared Fourier transform spectroscopy in the near range (DR-NIR) methods using in both cases a previous identification of the samples using a dendrographic classification and an appropriate partial least squares (PLS) calibration established from a set of nine external standards and optimized for each type of sample. It was analyzed a heterogeneous population of 11 samples obtained from the Spanish market, containing different co-formulated products, such as fosetyl-Al, copper oxychloride, metalaxyl or cymoxanil. High performance liquid chromatography (HPLC) was used as reference method for validation of both vibrational strategies. The close agreement between values found for both, DATR-MIR and DR-NIR methods, and reference HPLC values indicates the accuracy and reliability of the proposed techniques for the direct determination of mancozeb in commercially available formulations.     

Identification of metabolomic markers of lavender and lavandin essential oils using mid-infrared spectroscopy

Lavender (Lavandula angustifolia) and lavandin (sterile hybrid of L. angustifolia P. Mill. × Lavandula latifolia (L.f.) Medikus) are widely cultivated in the Mediterranean area for produce essential oils. In this study, 80 lavandin and 55 lavender essential oil samples from various varieties were analyzed. Firstly, a chemometric treatment of mid-infrared spectra was used to evaluate the capacity of Partial Least Squares Discriminant Analysis (PLS-DA) regression to discriminate French lavandin and lavender essential oil (EO) samples and their varieties (Abrial, Fine, Grosso, Maillette, Matherone, Sumian and Super), and secondly, to quantify the main compounds such as linalyl acetate, linalool, eucalyptol and camphor by PLS regression using reference data from gas chromatography. The examination of PLS and PLS-DA regression coefficients allowed the identification of metabolomic markers. The lavender/lavandin EOs and their varieties were very well classified (100% for lavender/lavandin EOs and between 98 and 100% for varieties). The calibration models obtained by PLS regression for the determination of the main compound contents revealed good correlation (≥0.86) between the predicted and reference values. This method can be used to control the authenticity and traceability of lavender/lavandin and their varieties. Finally, mid-infrared and Raman spectroscopy results were compared.     

Simultaneous spectrophotometric determination of ethinylestradiol and levonorgestrel by partial least squares and principal component regression multivariate calibration

Two spectrophotometric methods for the determination of Ethinylestradiol (ETE) and Levonorgestrel (LEV) by using the multivariate calibration technique of partial least square (PLS) and principal component regression (PCR) are presented. In this study the PLS and PCR are successfully applied to quantify both hormones using the information contained in the absorption spectra of appropriate solutions. In order to do this, a calibration set of standard samples composed of different mixtures of both compounds has been designed. The results found by application of the PLS and PCR methods to the simultaneous determination of mixtures, containing 4–11 μg ml⁻¹ of ETE and 2–23 μg ml⁻¹ of LEV, are reported. Five different oral contraceptives were analyzed and the results were very similar to that obtained by a reference liquid Chromatographic method.     

Classification of Brazilian Coffee Using Near-Infrared Spectroscopy and Multivariate Calibration

This work describes the use of near infrared spectroscopy (NIRS) and chemometric techniques calibration for the classification of coffee samples from different lots and producers acquired in supermarkets and roasting industries in some Brazilian cities. Seventy-three samples of finely ground roasted coffee were acquired in the market and 91 samples of roasted ground Arabica beans were analyzed in the full NIR spectral range (800–2500 nm) using a diffuse reflectance accessory coupled to an MB160 Bomem spectrophotometer. Two classification models were constructed: Soft Independent Modeling Class Analogy (SIMCA) and PLS Discriminant Analysis (PLS-DA). All findings reveal that NIR spectroscopy, coupled with either SIMCA or PLS-DA multivariate models, can be a useful tool to differentiate roasted coffee grains and to replace sensory tests.     

Sparse matrix transform based weight updating in partial least squares regression

Regression from high dimensional observation vectors is particularly difficult when training data is limited. Partial least squares (PLS) partly solves the high dimensional regression problem by projecting the data to latent variables space. The key issue in PLS is the computation of weight vector which describes the covariance between the responses and observations. For small-sample-size and high-dimensional regression problem, the covariance estimation is usually inaccurate and the correlated components in the predictors will distort the PLS weight. In this paper, we propose a sparse matrix transform (SMT) based PLS (SMT-PLS) method for high-dimensional spectroscopy regression. In SMT-PLS, the observation data is first decorrelated by SMT. Then, in the decorrelated data space, the PLS loading weight is computed by least squares regression. SMT technique provides an accurate data covariance estimation, which can overcome the effect of small-sample-size and benefit both the PLS weight computation and subsequent regression prediction. The proposed SMT-PLS method is compared, in terms of root mean square errors of prediction, to PLS, Power PLS and PLS with orthogonal scatter correction on four real spectroscopic data sets. Experimental results demonstrate the efficacy and effectiveness of our proposed method.     

基于偏最小二乘回归的类模型方法用于中药牛黄的真伪鉴别

针对独立软模式类簇法(SIMCA)在确定主成分数和决策区间时遇到的困难,提出了一种基于PLSR的类模型方法——PLS类模型方法(PLSCM)。通过把类描述问题转化为常见的PLSR问题,采用成熟的蒙特卡罗交互验证法确定模型的隐变量数和决策区间。采用本方法对不同牛黄样品的近红外光谱数据(波长范围4000～9000 cm-1)进行分析,可成功鉴别牛黄的真伪。本方法的可操作性和鉴别准确率均优于经典的SIMCA方法。对于原始光谱数据,PLSCM的训练和预测准确率均为100%,对于经SNV处理的数据,训练和预测准确率分别为99%和100%。