Conformational analysis of some 1R,4S‐2‐arylidene‐p‐menthan‐3‐ones by 1H NMR spectroscopy and molecular simulation

Based on ¹H NMR spectral analysis combined with molecular simulation, conformational states of the cyclohexanone ring were studied for some 1R,4S‐2‐(4‐X‐benzylidene)‐p‐menthan‐3‐ones (X = COOCH₃ or C₆H₅) in CDCl₃ and C₆D₆. The co‐existence of chair conformers with an axial orientation of both alkyl substituents and twist‐boat forms was established for the compounds studied at room temperature (22–23° C). The substituent X does not influence appreciably the ratio of these conformers, but the fraction of twist‐boat forms increases noticeably in benzene solutions as compared with CDCl₃ solutions. Rotameric states of the isopropyl fragment were also characterised for the compounds studied. Distinctions in conformational states for the 1R,4S‐2‐arylidene‐p‐menthan‐3‐ones and (?)‐menthone were revealed and are discussed. Copyright © 2002 John Wiley & Sons, Ltd.     

Ring Opening of Homochiral Bicyclic Oxazolidinones: Synthesis of Allylglycinol Derivatives

(4R,6aS)-2-Oxo-4-phenyl-2,4,5,6a,7-hexahydrooxazolo[3,2-c]oxazole and its 4-methyl analog were synthesized using (R)-phenylglycinol and (S)-alaninol as the chiral source, respectively. The ring opening reaction of the bicyclic oxazolidinones by an allyltrimethylsilane–titanium tetrachloride mixture afforded the corresponding substitution products with diastereoselectivity of up to ～3:1. The major substitution product was readily converted to allylglycinol derivatives.     

An Ab Initio Study and NBO Analysis of the Stability and Conformational Properties of Hexakis(trimethylelementhyl)benzene (Element = C,Si, Ge,and Sn)

Ab initio molecular orbital and density functional theory were used to investigate energetic and structural properties of the various conformations of hexa-tertbutylbenzene (1), hexakis(trimethylsilyl)benzene (2), hexakis (trimethylgermyl)benzene (3), and hexakis(trimethylstannyl)benzene (4). HF/3-21G//HF/3-21G and B3LYP/3-21G//HF/3-21G results revealed that the Twist-Boat (TB) conformer of compound 1 is more stable than the 1-Chair (C), 1-Boat (B), and 1-Planar (P) conformers. B3LYP/3-21G//HF/3-21G results show that the 1- TB conformer is more stable than 1- C, 1- B, and 1- P conformers of about 1.13, 4.34, and 99.94 kcal mol^?1 , respectively. Contrary to the stability order of compound 1 conformers, the C conformer of compounds 2–4 is more stable than TB, B, and P conformations, as calculated by B3LYP/3-21G//HF/3-21G and HF/3-21G//HF/3-21G levels of theory. The energy gap between the C and P conformers in compounds 1–4 is decreased in the following order: ΔE(4: C, P) < ΔE (3: C, P) < ΔE(2: C, P) < ΔE (1: C, P). This fact can be explained in terms of the increase of C _aromatic -M (M═C, Si, Ge, and Sn) bond lengths and the decrease of steric (van der Waals) repulsions in the previously discussed compounds. For compounds 1–3, the calculations were also performed at the B3LYP/ 6-31G*//HF/3-21G level of theory. However, the comparison showed that the results at B3LYP/3-21G//HF/3-21G methods correlated well with those obtained at the B3LYP/6-31G*// HF/6-31G method. Further, NBO analysis revealed that in compounds 1–4, the resonance energy associated with the σ_M-C1 to σ*_C2-C3 delocalization is 5.20, 9.68, 11.15, and 12.27 kcal mol^?1, respectively. These resonance energy values could explain the easiness of the ring flipping processes of C, B, and TB conformers of compounds 4 to 1. Also, the NBO results showed that by an increase of the σ_M-C1 → σ *_C2-C3 resonance energies in compounds 1–4, the σ_M-C1 bonding orbital occupancies decrease. This fact could fairly explain the increase of the C_aryl-M bond length from compound 1 to 4. The NBO results are also in good agreement with the calculated energy barriers for the ring flipping of the chair conformations in compounds 1–4, as calculated by B3LYP and HF methods.     

Synthese von N-Methyl- und N,N-Dimethylmerucathin sowie von N-Methyl- und N,N-Dimethylpseudomerucathin aus L-Alanin

Synthesis of N-Methyl- and N,N-Dimethylmerucathine and of N-Methyl- and N,N--Dimethylpseudomerucathine Starting from L -Alanine Starting form L -alanine, N-methylmerucathine (= (3R,4S)-4-(methylamino)1-phenyl-1-penten-3-ol; (3R,4S,)- 6 ), N,N-dimethylmerucathine (= (3R,4S)-4-(dimethylamino)-1-phenyl-1-penten-3-ol; (3R,4S)- 9 ), N-methylpseudomerucathine (= (3S,4S)-4-(methylamino)-1-phenyl-1-penten-3-01; (3S,4S)-6), and N,N-dimethylpseudomerucathine (= (3S,4S)-4-(dimethylamino)-1-phenyl-1-penten-3-ol; (3S,4S)- 9 ) were synthesized. The four compounds were analyzed by HPLC and compared with a natural khat extract.     

Investigation of an Olfactoryly Active Ring-Like Conformer of a Chain-Type Odorant, (3S)-3,7-dimethyloctanal,by computer calculation and graphics

The odor of (3S)-3,7-dimethyloctanal, a chain-type odorant, has some resemblance to that of ethyl (1 R, 6S)-2,2,6-trimethylcyclohexane-1-carboxylate, a ring-type odorant. We investigated the ring-like conformers of (3S)-3,7-dimethyloctanal. Two approaches, (i) systematic conformational analysis and (ii) construction of the initial structure by referring to the structure of the ring-type odorant, were considered in the search for ring-like conformers of the chain-type odorant. As a result, it was found that two stable ring-like conformers of (3S)-3,7-dimethyloctanal, obtained from the two approaches, resembled conformers of ethyl (1R, 6S)-2,2,6-trimethylcyclohexane-1-carboxylate in their three-dimensional structural features. The shapes of the two ring-like ones were not exactly the same but were quite similar. Therefore, the two ring-like conformers were considered to approximate the olfactoryly active conformer that binds and stimulates the same odor receptor as that for ethyl (1R,6S)-2,2,6-trimethylcyclohexane-1-carboxylate. In addition, ring-like conformers of another chain-type odorant, 2-methylpent-2-enal, were investigated to check the validity of the calculation method used.     

Syntheses and structures of three chiral complexes derived from nucleophilic addition of L-proline to di-2-pyridyl ketone

In the presence of nickel acetate, a chiral ligand, (S)-Hdphp ((S)-N-[di(2-pyridyl)-hydroxy-methyl]-proline), was synthesized in situ by nucleophilic addition of L-proline to di-2-pyridyl ketone. Based on this ligand, three chiral mononuclear complexes, {Ni[(S)-dphp](DMF)(H₂O)}(ClO₄) (1), {Ni[(S)-dphp](H₂O)₂}(ClO₄)(H₂O)_1.5 (2), and {Ni[(S)-dphp](SCN)(H₂O)} (3), have been obtained and characterized by single-crystal X-ray diffraction, elemental analyses, and infrared spectra. By virtue of charge-assisted O–H?···?O hydrogen-bonding interactions, all the complexes possess double chain structures. The double chains were connected into 2-D networks via π?···?π stacking and CH?···?π interactions in 1. For 2, O–H?···?O hydrogen-bonding interactions between free water molecules and other oxygens as well as π?···?π stacking and CH?···?π interactions extend the chains into a 3-D network. Complex 3 exhibits 3-D structure via O–H?···?S interactions.     

One new cytochalasin metabolite isolated from a mangrove-derived fungus Daldinia eschscholtzii HJ001

One new cytochalasin metabolite [11]-cytochalasa-5(6),13-diene-1,21-dione-7,18-dihydroxy-16,18-dimethyl-10-phenyl-(7S*,13E,16S*,18R*) (1), together with three known compounds (2–4) were obtained from the EtOAc extract of the endophytic fungus Daldinia eschscholtzii HJ001 isolated from the mangrove Brguiera sexangula var. rhynchopetala collected in the South China Sea. Their structures were elucidated by the detailed analysis of comprehensive spectroscopic data. Compounds 1 and 2 were evaluated for their antibacterial and cytotoxic activities.     

Gas-phase kinetics of N-substituted diacetamide

Gas-phase elimination reactions of number of N-substituted diacetamides have been studied. The rates of N-phenyl, 4-methoxyphenyl, 4-nitrophenyl, and benzyl diacetamide have been measured between 643–683, 642–693, 673–725, and 555–610 K, respectively. They undergo unimolecular first-order elimination reactions, for which log A = 12.8, 12.9, 12.8, and 11.0 s^?1 and E_a = 185.7, 191.4, 193.4, and 143.6 kJ mol^?1, respectively. The reactivity of these compounds has been compared with the unsubstituted diacetamide at 600 K. The kinetic data reveals that each of the N-aryldiacetamides is less reactive than the parent molecule. We attribute this observation to the resonance of the lone pair of electrons on the nitrogen with either the two carbonyl oxygen atoms or with the 6π electrons in the aromatic ring which will result in the stabilization of the N-aryldiacetamides related to the parent molecules. © 1994 John Wiley & Sons, Inc.     

Synthesis,characterization, and biocide activity of new dithiocarbamate-based complexes of In(III), Ga(III), and Bi(III) – Part III

In this work, we describe the syntheses, characterization, and antifungal activity of [In{S₂CNR(R¹)}₃] (1), [Ga{S₂CNR(R¹)}₃] (2), [Bi{S₂CNR(R¹)}₃] (3), [In{S₂CNR(R²)}₃] (4), [Ga{S₂CNR(R²)}₃] (5), and [Bi{S₂CNR(R²)}₃] (6) {R?=?Me; R¹?=?CH₂CH(OMe)₂; and R²?=?2-methyl-1,3-dioxolane}. All complexes have been characterized using infrared and ¹H and ¹³C spectroscopy, and the structures of 1, 3, 4, and 6 have been authenticated by X-ray diffraction. The In(III)–dithiocarbamate bonding scheme depicts a distorted octahedral with asymmetric In(III)–S bonds and S–In–S angles. A pentagonal bipyramid is observed for the corresponding Bi(III) complexes with intermolecular Bi–S associations through the lone pair of electrons. The antifungal activities of 1–6 have been screened against Aspergillus niger, Aspergillus parasiticus, and Penicillium citrinum, and the results have been compared with those of nystatin and miconazole nitrate, as control drugs.     

A tetranuclear nickel(II) heterocubane complex of a bidentate N,O-hydroxymethyl-oxazoline ligand. Synthesis,characterization, magnetic measurements and DFT investigations

Synthesis, structural, and magnetochemical characterization of the tetranuclear [Ni₄O₄] heterocubane cluster [NiCl(L1)(MeOH)]₄, 1, employing the bidentate N,O-ligand 2-hydroxymethyl-2-oxazoline, HL1, is reported. In the solid state, each nickel(II) is coordinated in a distorted octahedral environment, located on four corners of a [Ni₄(μ₃-O)₄] cubane core motif. Measurements of the magnetic susceptibility in solution (Evans method) as well as in the solid state (magnetic susceptibility balance) gave values of 5.74 and 6.08 unpaired electrons, respectively, indicating a spin ground state of S = 3. At maximum spin degeneracy (S = 4), eight unpaired electrons would be expected. Magnetic properties were further evaluated by SQUID measurements of 1, confirming the spin ground state of 1 to be S = 3. The observed deviation is caused by antiferromagnetic coupling between the four Ni atoms. In addition, broken-symmetry DFT calculations confirmed an overlap of magnetic orbitals resulting in exchange coupling between the four nickel(II) ions of 1.     

Synthese von 3,3a-Dihydro-2H,5H-azeto[2,1-b]benzo[d]-1,3-oxazin-2,5-dionen,I

The thioformimidates4, which may be obtained by S-alkylation of the thioformamides3, react with chloroacetylchloride/triethylamine to yield the (3R, 4S/3S, 4R)-3-chloro-4-methylthio-2-azetidinones5. Dehalogenation of5 leads to6, which undergoes ring closure by the action of mercuric oxide. Treatment of8, which may be synthesized by chlorolysis of7, with triethylamine gives also the title compounds9.

     

Synthesis,structure and magnetic properties of Ni2(NO3)4(APTY)4 (APTY=1,5-dimethyl-2-phenyl-4-{[(1 E )-pyridine-4-ylmethylene]amino}-1,2-dihydro-3 H -pyrazol-3-one)

A novel dinuclear nickel(II) complex Ni₂(NO₃)₄(APTY)₄ (1) (APTY?=?1,5-dimethyl-2-phenyl-4-{[(1E)-pyridine-4-ylmethylene]amino}-1,2-dihydro-3H-pyrazol-3-one), was synthesized by solvothermal reaction of Ni(NO₃)₂?·?6H₂O with APTY in methanol at 353?K. The structure consists of centrosymmetric dimers resulting from octahedrally coordinated Ni atoms bridged by APTY ligands. Weak intermolecular interactions (C–H?···?N, C–H?···?O hydrogen bonding, C–H?···?π and π–π stacking interactions) are responsible for a supramolecular assembly of molecules in the lattice. Magnetic measurements over 1.8–300?K show weak antiferromagnetic coupling between Ni(II) ions with J?=?2.969?cm^?1, g?=?2.280, θ?=??5.903.     

Syntheses,characterization of and studies on the electrochemical behaviour of ferrocenyl dithiophosphonates and 4-methoxyphenyl dithiophosphonates

Some 1,3-dithiadiphosphetane 2,4-disulfides (X₂P₂S₄, X: Fc, FcLR; X: CH₃O?C₆H₄?, LR) were allowed to react with alcohols to obtain dithiophosphonic acids (X(OR)PS₂H). These were converted to the corresponding ammonium salts. The salts were of the structures [Fc(OR)PS₂]^?[NH₄]⁺, R: 3-methyl-1-butyl- for I; 1-phenyl-1-propyl- for II; 3-pentyl- for III; 3-phenyl-1-propyl- for IV and [CH₃O?C₆H₄(OR)PS₂]^?[NH₄]⁺, R: 3-methyl-1-butyl- for V and 1-phenyl-1-propyl- for VI. To the best of our knowledge, all the compounds except V were prepared for the first time.

The compounds synthesized were characterized by elemental analysis, NMR (¹H, ¹³C, ³¹P), MS, FTIR, and Raman spectroscopies. Electrochemical behaviors of I–VI at disposable pencil graphite electrode (PGE) were investigated by using cyclic voltammetry (CV) and square-wave voltammetry (SWV). Adsorption and diffusion patterns of all the compounds on the PGE were also studied.

Two electroactive groups were identified in the compounds I–IV and only one in V and VI. The ferrocenyl groups of I-IV were oxidized at around 0.4 V. The same compounds display a second, more intense CV band at 0.8 V. The corresponding band for the compounds V–VI appears at around 0.6 V with a much weaker intensity. It is suggested that the ferrocenyl group introduced into the structures stabilizes the radical species formed as the product of the oxidation of the dithiophosphonato group.     

A joint theoretical and experimental structural study of two novel 1,2,4-triazolo[3,4-<Emphasis Type="Italic">b</Emphasis>]-1,3,4-thiadiazine derivatives

In this study, two novel 1,2,4-triazolo[3,4-b]-1,3,4-thiadiazine derivatives, 3-[2-(4-methoxyphenyl)ethyl]-6-phenyl-7H-1,2,4-triazolo[3,4-b]-1,3,4-thiadiazine (compound 1) and 3-[2-(3,4,5-trimethoxyphenyl)ethyl]-6-phenyl-7H-1,2,4-triazolo[3,4-b]-1,3,4-thiadiazine (compound 2), having analgesic–anti-inflammatory activity were synthesized and characterized by IR, ¹H-NMR, and mass spectroscopic techniques besides elementary analysis. Additionally, the structures and molecular packings of the mentioned compounds have been investigated by X-ray single crystal diffraction. The six-membered thiadiazine ring adopts the screw boat conformation in both the compounds. In the crystal packings of the compounds 1 and 2, C–H···N and C–H···O interactions link the molecules into a two-dimensional network and generate infinite chains. Furthermore, C–H···π intermolecular interactions provide further stability to the molecular packing in both the molecules. The conformers have been predicted by the potential energy surface scan employing the AM1 method. Geometry optimizations and electrostatic properties have been obtained using AM1 and ab initio quantum methods.     

Conformational analysis of 1,2,3,4-tetrahydroisoquinolines

Ring and nitrogen inversion account for the conformational equilibria of 3-phenyl-1, 2,3, 4-tetrahydroiso-quinolines. In order to quantitate the relative contribution of each conformer to the equilibrium, we undertook a molecular mechanics study on several substituted 3-phenyl-1, 2, 3, 4-tetrahydroisoquinolines. Predictions from calculations were checked against cmr chemical shift data. No boat conformation contributed significantly to the equilibrium. A general result of our calculations is that in all cases the 3-phenyl group in the equatorial position is strongly favored (by at least 2.50 kcal/mole). For 3-phenyl-1, 2, 3, 4-tetrahydroisoquinolines without substitution at nitrogen, N-H in equatorial position is preferred over the axial conformer, although the energy difference between both is always small (0.30–1.10 kcal/mole). For the cis-1,3-disubstituted compounds the le'3e conformers are the only species present (at least 99.8%). The calculated energy differences between the la′3a conformer and the le′3e conformer are always large (3.80–6.10 kcal/mole for the NHe conformers and 3.60–3.80 kcal/mole for the NHa conformers). The lack of a γ_1a upfield shift at C3 also points to the preference for the pseudoequatorial-equatorial conformer. For N-methyl-3-phenyl-1,2,3,4-tetrahydroisoquinoline a preference for the NMe group in the equatorial position is predicted (0.60–2.00 kcal/mole). The small downfield shift at C4 (γ_Na = 0.5 ppm) is consistent with the equatorial NMe preference. For the cis-1,2,3-trisubstituted compounds no significant γ_1a effect at C3 (γ_1a = -0.2 and 1.0 ppm) or γ_Na effect at C4 (γ_Na = 0.1 and 0.4 ppm) is observed. For these compounds, deformations due to steric congestion are evidenced by the deviation from the values of the C4a-C8a-Cl-N and C4a-C4-C3-N torsional angles, as compared to less crowded 3-phenyl-1,2,3,4-tetrahydroisoquinolines. Here the heterocyclic ring adopts a distorted half-chair conformation.     

Synthesis of Polyfunctionally Substituted Pyrazolonaphthyridine,Pentaazanaphthalene, and Heptaazaphenanthrene Derivatives

6-aminopyrazolo[3,4-b]pyridine-5-carbonitrile (2) was used as a precursor for the synthesis of a variety of pyrazolo[3,4-b][1,8]naphthyridines (3, 4) and pentaazacyclopenta[b]naphthalenes (5–10, 13, 14) via the initial addition to either the cyano or amino group followed by cyclization. Also, a series of heptaazadicyclopenta[a,g]naphthalenes (15–17) and heptaazacyclopenta[b]phenanthrenes (18, 19) were obtained via the interaction of 4-(dibenzothiophen-2-yl)-1,5-dihydro-5-imino-3-methyl-1-phenyl-1,2,6,8,9-pentaazacyclopenta[b]naphthalen-6-ylamine (14) with different reagents. The structures of the synthesized compounds were established by elemental and spectral analyses.     

Octahedral iron(II) complexes with pyridyl triazine and bipyridine ligands – synthesis,computational studies,mechanisms and kinetics with 1,10-phenanthroline and 2,2′,6,2″-terpyridine

[Bis(3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine)(2,2′-bipyridine)iron(II)], [Fe(PDT)₂(bpy)]²⁺ (1), [bis(3-(4-phenyl-2-pyridyl)-5,6-diphenyl-1,2,4-triazine)(2,2′-bipyridine)iron(II)], [Fe(PPDT)₂(bpy)]²⁺ (2), [bis(2,2′-bipyridine)(3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine)iron(II)], [Fe(PDT)(bpy)₂]²⁺ (3), and [bis(2,2′-bipyridine)(3-(4-phenyl-2-pyridyl)-5,6-diphenyl-1,2,4-triazine)iron(II)], [Fe(PPDT)(bpy)₂]²⁺ (4) have been synthesized and characterized. Substitution of the triazine and bipyridine ligands from the complexes by nucleophiles (nu), namely 1,10-phenanthroline (phen) and 2,2′,6,2″-terpyridine (terpy) was studied in a sodium acetate-acetic acid buffer over the pH range 3–6 at 25, 35, and 45°C under pseudo-first order conditions. Reactions are first order in the concentration of complexes 1–4. The reaction rates increase with increasing [nu] and pH whereas ionic strength has no effect on the rate. Straight-line plots with positive slopes are observed when the k_obs values are plotted against [nu] or 1/[H⁺]. The substitution reactions proceed by dissociative as well as associative paths and the latter path is predominant. Observed low E_a values and negative ΔS^# values support the dominance of the associative path. Phenyl groups on the triazine ring modulate the reactivity of the complexes. The π-electron cloud on the phenyl rings stabilizes the charge on metal center by inductive donation of electrons toward the metal center, resulting in a decrease in reactivity of the complex and the order is 1 < 2 < 3 < 4. Density functional theory (DFT) calculations also support the interpretations drawn from the kinetic data.     

Theoretical studies on thiabenzene and its fused derivatives: DFT and ab initio computations

The molecular structures of thiabenzene ( 1 ), 1‐thianaphthalene ( 2 ), 2‐thianaphthalene ( 3 ), and 9‐thiaanthracene ( 4 ) are studied using HF and DFT methods with 6‐31+G* basis set. The nonplanar boat conformers of 1–4 , with 6π‐electrons in their heterocyclic ring, appear more stable than the corresponding planar conformers with 8π‐electrons in the ring. This study focuses on the stability, the ylide character, the inversion barrier energy of sulfur atoms, and the conformational flexibility of the ring in 1–4 . © 2006 Wiley Periodicals, Inc. Heteroatom Chem 17:376–381, 2006; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20214     

A study of the Claisen rearrangement of 7-(3-phenyl-2-propenyloxy)-3-phenyl-(4H)-1-benzopyran-4-one derivatives

Summary The Claisen rearrangement of 7-(3-phenyl-2-propenyloxy)-3-phenyl-(4H)-1-benzopyran-4-one (2 a) gave 7-hydroxy-8-(1-phenyl-2-propenyl)-3-phenyl-(4H)-1-benzopyran-4-one (3 a) and 2,3-dihydro-2,6-diphenyl-3-methyl-(7H)furo[2,3-h]-1-benzopyran-7-one (7 a). 2-Methyl-7-(3-phenyl-2-propenyloxy)-3-phenyl-(4H)-1-benzopyran-4-one (2 b) afforded4 b and7 b. 8-Methyl-7-(3-phenyl-2-propenyloxy)-3-phenyl-(4H)-1-benzopyran-4-one (12) gave only the alkali soluble product 7-hydroxy-8-methyl-6-(1-phenyl-2-propenyl)-3-phenyl-(4H)-1-benzopyran-4-one (13).3 a,4 b, and13 were further cyclized in acidic medium to9 a,10 b, and14 followed by dehydrogenation.This paper is dedicated to Dr. F. M. Dean, Department of Organic Chemistry, Robert Robinson Laboratories, University of Liverpool, Liverpool, U. K., on his retirement     

Structure and Bonding in Cyclic Sulfur-Nitrogen Compounds—Molecular Orbital Considerations

The molecular structures of monocyclic sulfur-nitrogen ring systems, such as S₂N₂, S₃N, S₄N and S₅N, can be considered as examples of electron rich (4n + 2)π systems. The structures of S₄N₄, S₄N, P₄S₄, As₄S₄ and the bicyclic structures S₄N, S₄N as well as S₅N₆ can be rationalized on the basis of a planar tetrasulfur tetranitride with 12π electrons.