Oxidation of DNA Bases Influenced by the Presence of Other Bases

Electrochemical detection of DNA is a highly important topic. Here we show that the electrochemical responses of one DNA base (guanine, adenine, cytosine or thymine), in terms of oxidation potential, current intensity, peak width and resolution can be highly influenced by the presence of other DNA bases at electrochemically reduced graphene oxide (ER‐GO) as well as standard glassy carbon electrode. We have observed that the effects were more significant for adenine base on ER‐GO and cytosine base on glassy carbon (GC) electrode. Differences in responses were generally low in a mixture of four different DNA bases but interestingly, deviations become significantly larger when only one or two other bases were present. Our findings are of paramount importance for future developments in DNA detection and analysis since individual DNA bases are not present in isolation in nature or in typical biosensing systems.     

On oxygen-containing groups in chemically modified graphenes

Reduced graphenes (belonging to the class of chemically modified graphenes, CMG) are one of the most investigated and utilized materials in current research. Oxygen functionalities on the CMG surfaces have dramatic influences on material properties. Interestingly, these functionalities are rarely comprehensively characterized. Herein, the four most commonly used CMGs, mainly electrochemically reduced graphene oxide (ER-GO), thermally reduced graphene oxide (TR-GO), and the corresponding starting materials, that is, graphene oxide and graphite oxide, were comprehensively characterized by a wide variety of methods, such as high-resolution X-ray photoelectron spectroscopy, electrochemical impedance spectroscopy, UV/Vis spectroscopy, transmission electron microscopy (TEM), and voltammetry, to establish connections between the structures of these materials that carry different oxygen functionalities and their electrochemical behaviors. This was followed by the quantification of the negatively charged oxygen-containing groups (OCGs) by UV/Vis spectroscopy and of the electrochemically reducible OCGs by voltammetry. Lastly, a biofunctionalization with gold nanoparticle (AuNP)-modified DNA sequences was performed by the formation of covalent bonds with the carboxylic groups (-COOH) on the CMG surfaces. There was an evident predominance of functionalizable -COOH groups on the ER-GO surface, as confirmed by a higher amount of Au detected both with differential-pulse voltammetry and impedance spectroscopy, coupled with visualization by TEM. We exploited the DNA-Au bioconjugates as highly specific stains to localize and visualize the positions of carboxylic groups. Our findings are very important to clearly identify the presence, nature, and distribution of oxygen functionalities on different chemically modified graphenes.     

Graphene platforms for the detection of caffeine in real samples

The analysis of food components is of high importance due to food safety and security. Here the electrochemical detection of caffeine was performed on different chemically modified graphene (CMG) surfaces carrying diverse amount of defects and oxygen functionalities. The analytical performances of graphite oxide (GPO), graphene oxide (GO), and electrochemically reduced graphene oxide (ERGO) were compared for the first time for the detection of caffeine. It was found that ERGO showed the most favourable analytical parameters, such as lower oxidation potential, sensitivity, linearity and reproducibility of the response. ERGO was then used for the analysis of real samples. Caffeine levels of soluble coffee, teas and energetic drinks were measured without the need of any sample pre-treatment. Our findings are very important to gain more insight into the applicability of different graphene materials to real samples for sense-and-act analysis.     

In situ Electroreduction of Graphene Oxide: Increased Sensitivity for the Determination of NADH

A novel and useful method to catalyze the electro‐oxidation of nicotinamide adenine dinucleotide (NADH) over a glassy carbon electrode (GCE) modified with graphene oxide (GO) is presented. Based on the presence of oxygen moieties in GO, which can be easily reduced, an in situ electrochemical generation of reduced graphene oxide (denoted as erGO) applying a sufficient negative potential. A potential of ?1.000 V was selected to generate the erGO/GCE as a pretreatment potential before the detection of NADH. The in situ generated erGO/GCE system produces a decrease in the overpotential of NADH oxidation from +0.720 V to +0.230 V compared with GCE. The process also produced an important increase in current signals. The modified electrode was characterized by scanning electron (SEM) and electrochemical microscopies (SECM), cyclic voltammetry and by Raman spectroscopy. Amperometric detection of NADH via this straightforward electrocatalytic method provides a wide linear range between 10 and 100 μM, a lower detection limit of 0.36 μM and an excellent sensitivity of (1.47±0.09) μA mM^?1.     

On Oxygen‐Containing Groups in Chemically Modified Graphenes

Reduced graphenes (belonging to the class of chemically modified graphenes, CMG) are one of the most investigated and utilized materials in current research. Oxygen functionalities on the CMG surfaces have dramatic influences on material properties. Interestingly, these functionalities are rarely comprehensively characterized. Herein, the four most commonly used CMGs, mainly electrochemically reduced graphene oxide (ER‐GO), thermally reduced graphene oxide (TR‐GO), and the corresponding starting materials, that is, graphene oxide and graphite oxide, were comprehensively characterized by a wide variety of methods, such as high‐resolution X‐ray photoelectron spectroscopy, electrochemical impedance spectroscopy, UV/Vis spectroscopy, transmission electron microscopy (TEM), and voltammetry, to establish connections between the structures of these materials that carry different oxygen functionalities and their electrochemical behaviors. This was followed by the quantification of the negatively charged oxygen‐containing groups (OCGs) by UV/Vis spectroscopy and of the electrochemically reducible OCGs by voltammetry. Lastly, a biofunctionalization with gold nanoparticle (AuNP)‐modified DNA sequences was performed by the formation of covalent bonds with the carboxylic groups (? COOH) on the CMG surfaces. There was an evident predominance of functionalizable ? COOH groups on the ER‐GO surface, as confirmed by a higher amount of Au detected both with differential‐pulse voltammetry and impedance spectroscopy, coupled with visualization by TEM. We exploited the DNA–Au bioconjugates as highly specific stains to localize and visualize the positions of carboxylic groups. Our findings are very important to clearly identify the presence, nature, and distribution of oxygen functionalities on different chemically modified graphenes.     

Influence of parent graphite particle size on the electrochemistry of thermally reduced graphene oxide

Electrochemical applications of graphene are of very high importance. For electrochemistry, bulk quantities of materials are needed. The most common preparation of bulk quantities of graphene materials is based on oxidation of graphite to graphite oxide and subsequent thermal exfoliation of graphite oxide to thermally reduced graphene oxide (TR-GO). It is important to investigate to which extent a reaction condition, that is, composition of the oxidation mixture and size of graphite materials, influences the properties of the resulting materials. We characterised six graphite materials with a range of particle sizes (0.05, 11, 20, 32, 35 and 41 μm) and the TR-GO products prepared from them by use of scanning electron microscopy, Raman spectroscopy and X-ray photoelectron spectroscopy. Cyclic voltammetric performance of the TR-GO samples was compared using ferro/ferricyanide and ascorbic acid. We observed no correlation between size of initial graphite and properties of the resultant TR-GO such as density of surface defects, amount of oxygen-containing groups, or rate of heterogeneous electron transfer (HET). A positive correspondence between HET rate and high defect density as well as low amounts of oxygen functionalities was noted. Our findings will have profound influence upon practical fabrication of graphene for applications in sensing and energy storage devices.     

Comparative Studies on Electrocatalytic Activities of Chemically Reduced Graphene Oxide and Electrochemically Reduced Graphene Oxide Noncovalently Functionalized with Poly(methylene blue)

This study compares the electrocatalytic activities of chemically reduced graphene oxide (crGO) and electrochemically reduced graphene oxide (erGO), which are both noncovalently functionalized with a polyaromatic dye, poly(methylene blue) (polyMB), toward the oxidation of β‐nicotinamide adenine dinucleotide (NADH). PolyMB‐crGO and polyMB‐erGO composites were obtained via electropolymerization of methylene blue on crGO and GO modified glassy carbon (GC) electrodes, respectively. Cyclic voltammetry (CV) results indicate that these two types of integrated electrodes reveal different electrocatalytic activities. PolyMB‐crGO integrated electrode possesses lower catalytic oxidation potential, suggesting higher catalytic activity. The present study is helpful for the understanding and screening of graphene‐based advanced carbon nanomaterials for potential electrochemical applications.     

Electrochemistry at chemically modified graphenes

Electrochemical applications of graphene are of great interest to many researchers as they can potentially lead to crucial technological advancements in fabrication of electrochemical devices for energy production and storage, and highly sensitive sensors. There are many routes towards fabrication of bulk quantities of chemically modified graphenes (CMG) for applications such as electrode materials. Each of them yields different graphene materials with different functionalities and structural defects. Here, we compare the electrochemical properties of five different chemically modified graphenes: graphite oxide, graphene oxide, thermally reduced graphene oxide, chemically reduced graphene oxide, and electrochemically reduced graphene oxide. We characterized these materials using transmission electron microscopy, Raman spectroscopy, high-resolution X-ray photoelectron spectroscopy, electrochemical impedance spectroscopy, and cyclic voltammetry, which allowed us to correlate the electrochemical properties with the structural and chemical features of the CMGs. We found that thermally reduced graphene oxide offers the most favorable electrochemical performance among the different materials studied. Our findings have a profound impact for the applications of chemically modified graphenes in electrochemical devices.     

Interaction Between DNA and Some Salicylic Acid Derivatives and Characterization of Their DNA Targets

A nanofiber polypyrrole (PPy) film was electrochemically deposited on a Pt electrode and used for immobilization of single‐stranded DNA (ssDNA) and investigation of hybridization events. Then, the interaction of DNA with four salicylic acid (SA) derivatives was studied with electrochemical methods. The oxidation peak of guanine was decreased by increasing the concentrations of salicylic acid derivatives. The binding constants of these compounds with four different sequences of DNA including different percentages of guanine‐cytosine and adenine‐thymine bases were calculated and it was clarified that sequences with higher percentage of adenine‐thymine bases have a higher binding constant in their interaction with SA derivatives.     

Inherent Electrochemistry and Activation of Chemically Modified Graphenes for Electrochemical Applications

Graphene research is currently at the frontier of electrochemistry. Many different graphene‐based materials are employed by electrochemists as electrodes in sensing and in energy‐storage devices. Because the methods for their preparation are inherently different, graphene materials are expected to exhibit different electrochemical behaviors depending on the functionalities and density of defects present. Electrochemical treatment of these “chemically modified graphenes” (CMGs) represents an easy approach to alter surface functionalities and consequently tune the electrochemical performance. Herein, we report a preliminary electrochemical characterization of four common chemically modified graphenes, namely: graphene oxide, graphite oxide, chemically reduced graphene oxide, and thermally reduced graphene oxide. These CMGs were compared with graphite as a reference material. Cyclic voltammetry was used to ascertain the chemical functionalities present and to understand the potential ranges in which the materials were electroactive. Electrochemical treatment with either an oxidative or a reductive fixed potential were then carried out to activate these chemically modified graphenes. The effects of such electrochemical treatments on their electrocatalytic properties were then investigated by cyclic voltammetry in the presence of well‐known redox probes, such as [Fe(CN)₆]^4?/3?, Fe^3+/2+, [Ru(NH₃)₆]^2+/3+, and ascorbic acid. Thermally reduced graphene oxide exhibited the best electrochemical behavior amongst all of the CMGs, with the fastest rate of heterogeneous electron transfer (HET) and the lowest overpotentials. These findings will have far‐reaching consequences for the evaluation of different CMGs as electrode materials in electrochemical devices.     

电位调控制备还原氧化石墨烯的电催化性能研究

本文通过控制电位还原氧化石墨烯,可控制备不同含氧官能团的石墨烯纳米材料。以多巴胺、[Fe(CN)_6]~(3-)、NADH为电活性探针,研究了石墨烯表面含氧官能团、缺陷、表面荷电性质以及导电性等对石墨烯电催化性能的影响。研究发现,低还原程度的氧化石墨烯表面含有大量缺陷和丰富的官能团,能够促进多巴胺自催化反应,也有利于K_3[Fe(CN)_6]在电极表面的电子转移;随着氧化石墨烯还原程度提高,其导电性逐渐得到改善,且其表面官能团和缺陷位点数量逐渐减少,对NAD~+的吸附变弱,因而能促进NADH发生电催化氧化。     

Graphene materials preparation methods have dramatic influence upon their capacitance

Graphene related materials are widely expected to play a major role as materials for the construction of supercapacitors. We demonstrate here that graphene oxides prepared by various well-established methods exhibit dramatically different capacitances. We exfoliated graphite oxide sonographically to graphene oxide (GO) and we reduced GO by chemical or electrochemical means to chemically reduced graphene oxide (CRGO) and electrochemically reduced graphene oxide (ERGO); in addition, graphite oxide was thermally exfoliated leading to thermally reduced graphene oxide (TRGO). We found clear dependence of weight specific capacitance upon amount of oxygen containing groups presented on the surface of these graphenes. GO exhibits the lowest and TRGO the highest values of weight specific capacitance.     

A Reduced Graphene Oxide‐based Electrochemical DNA Biosensor for the Detection of Interaction between Cisplatin and DNA based on Guanine and Adenine Oxidation Signals

A glassy carbon electrode (GCE) was modified by electrochemically reduced graphene oxide (ERGO) for subsequent dsDNA immobilization. The interaction of cisplatin with dsDNA was studied at this modified electrode. Quantitative investigations were performed by adsorptive transfer stripping voltammetry (AdTSV) using differential pulse voltammetry (DPV). The morphology and structure of graphene oxide (GO) and ERGO modified GCEs (GO/GCE and ERGO/GCE, respectively) were characterized by UV‐vis, FT‐IR, Raman spectroscopy and cyclic voltammetry. Compared with the bare GCE and the GO/GCE, the ERGO/GCE exhibited excellent electrocatalytic activity towards the oxidation of dsDNA due to guanine and adenine groups, testified by high oxidation peak currents and decreased oxidation potentials. The interaction of micromolar concentrations of cisplatin with surface confined dsDNA was readily detected as inferred from the decrease of the voltammetric oxidation peaks of guanine and adenine. This trend was significantly greater at the ERGO/GCE compared to the GO/GCE. The interaction of cisplatin with dsDNA was also studied in solution phase by AdTSV with detection at the ERGO/GCE.     

Electrochemical tyrosine sensor based on a glassy carbon electrode modified with a nanohybrid made from graphene oxide and multiwalled carbon nanotubes

We report on a glassy carbon electrode that was modified with a composite made from graphene oxide (GO) and multiwalled carbon nanotubes (MWCNT) that enables highly sensitive determination of L-tyrosine. The sensor was characterized by transmission electron microscopy and electrochemical impedance spectroscopy, and its electrochemical properties by cyclic voltammetry, chronocoulometry and differential pulse voltammetry. The GO/MWCNT hybrid exhibits strong catalytic activity toward the oxidation of L-tyrosine, with a well defined oxidation peak at 761 mV. The respective current serves as the analytical information and is proportional to the L-tyrosine concentration in two ranges of different slope (0.05 to 1.0 μM and 1.0 to 650.0 μM), with limits of detection and quantification as low as 4.4 nM and 14.7 nM, respectively. The method was successfully applied to the analysis of L-tyrosine in human body fluids. The excellent reproducibility, stability, sensitivity and selectivity are believed to be due to the combination of the electrocatalytic properties of both GO and MWCNT. They are making this hybrid electrode a potentially useful electrochemical sensing platform for bioanalysis.

Roll‐to‐Roll printed PEDOT/PSS/GO Plastic Film for Electrochemical Determination of Carbofuran

In this work, we developed a roll‐to‐roll printed poly(3,4‐ethylenedioxythiophene)/polystyrene sulphoanate without graphene oxide (GO) (PEDOT/PSS) and with graphene oxide (PEDOT/PSS/GO) plastic films for the electrochemical determination of carbofuran. Both the PEDOT/PSS and PEDOT/PSS/GO plastic films showed electroactivity towards the oxidation of carbofuran. Incorporation of graphene oxide (GO) improves the electrochemical activity of carbofuran and increased its sensitivity. The printed plastic films were characterized by cyclic voltammetry (CV), linear sweep voltammetry (LSV), surface profilometer, four point probe and atomic force microscopy (AFM). The effects of pH, deposition time, deposition potential and film thickness on the oxidation peak current of carbofuran were investigated. Under the optimized conditions, a dynamic linear range of 1 μM–90 μM with a detection limit of 1.0×10^?7 M (S/N=3) were obtained. The printed PEDOT/PSS/GO plastic electrode was applied for the determination of carbofuran in vegetable and fruit samples with recoveries between 94.4 and 101.8 %.     

Development of a New Label‐free,Indicator‐free Strategy toward Ultrasensitive Electrochemical DNA Biosensing Based on Fe3O4 Nanoparticles/Reduced Graphene Oxide Composite

Electrochemistry offers sensitivity, selectivity and low cost for fabrication of sensors capable of detection of selected DNA targets or mutated genes associated with human disease. In this work, we have developed a novel label‐free, indicator‐free strategy of electrochemical DNA sensor based on Fe₃O₄ nanoparticles/reduced graphene oxide (Fe₃O₄/r‐GO) nanocomposite modified electrode. By using Fe₃O₄/r‐GO nanocomposite as a substrate to immobilize probe DNA and subsequent hybridization with target sequence to form dsDNA, a great signal amplification was achieved through measuring changes in DPV peak current of underlying Fe(II)/Fe(III) redox system. With the remarkable attomolar sensitivity and high specificity and at the same time, great simplicity, the proposed strategy may find great applications in different DNA assay fields.     

Determination of Sudan I Using Electrochemically Reduced Graphene Oxide

Electrochemically reduced graphene oxide (ER-GO) was prepared by reducing exfoliated graphene oxide sheets on a glassy carbon electrode (GCE). The voltammetric responses of Sudan I-IV were studied at the ER-GO modified GCE (ER-GO/GCE). Compared with chemically reduced graphene oxide (CR-GO) modified electrode (CR-GO/GCE), ER-GO/GCE showed higher voltammetric responses to Sudan I. The electrode had a linear response to Sudan I in the range of 0.04–8.0 µmol L^?1 and a detection limit of 0.01 µmol L^?1. The real sample determination indicated that the proposed method was reliable, effective, and sufficient.     

Poly(alizarin red)/Graphene modified glassy carbon electrode for simultaneous determination of purine and pyrimidine

In this work, a poly(alizarin red)/Graphene composite film modified glassy carbon electrode (PAR/Graphene/GCE) was prepared for simultaneous determination of four DNA bases (guanine, adenine, thymine and cytosine) without any pretreatment. The morphology and interface property of PAR/Graphene films were examined by scanning electron microscopy and electrochemical impedance spectroscopy. The PAR/Graphene/GCE exhibited excellent electrocatalytic activity toward purine (guanine and adenine) and pyrimidine (thymine and cytosine) in 0.1 M phosphate buffer solution (pH 7.4). Under optimum conditions, differential pulse voltammetry was used to detect the oxidation of purine and pyrimidine. The results showed that PAR/Graphene/GCE exhibited well-separated peaks, low detection limit, high sensitivity and wide linear range for simultaneous detection of purine and pyrimidine. The proposed sensor also has good stability and reproducibility. Furthermore, the modified electrode was applied for the detection of DNA bases in a fish sperm DNA sample with satisfactory results.     

Graphene Oxide Modified Chemically Activated Graphite Electrodes for Detection of microRNA

In our study, graphene oxide (GO) modified graphite electrodes were used for sensitive and selective impedimetric detection of miRNA. After chemical activation of pencil graphite electrode (PGE) surface using covalent agents (CA), GO modification was performed at the surface of chemically activated PGE. Then, CA‐GO‐PGEs were applied for impedimetric miRNA detection. The microscopic and electrochemical characterization of CA‐GO‐PGEs was performed by scanning electron microscopy (SEM) and electrochemical impedance spectroscopy (EIS). The optimization of experimental conditions; such as GO concentration, DNA probe concentration and miRNA target concentration was performed by using EIS technique. After the hybridization occurred between miRNA‐34a RNA target and its complementary DNA probe, the hybrid was immobilized onto the surface of CA‐GO‐PGEs. Then, the impedimetric detection of miRNA‐DNA hybridization was performed by EIS. The selectivity of our assay was also tested under the optimum experimental conditions.     

Electrochemical biosensor for simultaneous determination of guanine and adenine based on dopamine-melanin colloidal nanospheres–graphene composites

Dopamine-melanin colloidal nanospheres (Dpa-melanin CNDs)–graphene composites-modified glassy carbon electrode (GCE) was prepared by a simple procedure and then successfully used to simultaneously determine guanine and adenine. Scanning electron microscopy (SEM) images and transmission electron microscopy (TEM) were used to characterize the morphology of the Dpa-melanin CNSs–graphene composite. Cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS) were used to characterize the electrode modifying process. Differential pulse voltammetry (DPV) was used to study the electrocatalytic activity toward the electrochemical oxidation of guanine and adenine. The modified electrode exhibited enhanced electrocatalytic behavior and good stability for the simultaneous determination of guanine and adenine compared with bare GCE. The electrochemical biosensor exhibited wide linear range of 0.5 to 150 μM with detection limit of 0.05 and 0.03 μM for guanine and adenine detection (S/N?=?3), respectively. Furthermore, the biosensor showed high sensitivity, good selectivity, good reproducibility, and long-term stability to guanine and adenine detection. At the same time, the fabricated electrode was successfully applied for the determination of guanine and adenine in denatured DNA samples with satisfying results. These results demonstrated that Dpa-melanin CNSs–graphene composite was a promising substrate for the development of high-performance electrochemical biosensor.