On the use of single-photon ionization for inorganic surface analysis

Summary A general surface analysis method has been developed based on non-selective photoionization of sputtered or desorbed neutral atoms and molecules above the surface, followed by time-of-flight mass spectrometry. The approach, currently utilizes two main types of ionizing radiation and a variety of desorption probes. For photoionization, coherent untuned sources are used; an intense focused pulsed UV laser beam is used for non-resonant multiphoton ionization to give elemental and limited chemical information, usually used for inorganic analysis; a coherent VUV source is used for single-photon ionization at 118 nm (10.5 eV) produced by frequency tripling of 355 nm light from a Nd:YAG laser. This paper focuses on single-photon ionization for inorganic systems. The desorption probes used are ion, electron, and laser beams as well as thermal desorption. For depth profiling, ion beams are specifically used. Any focused desorption probe beam can provide lateral spatial resolution.     

Multiphoton ionization detected by fourier-transform mass spectrometry

Ions produced by multiphoton ionization (MPI) of naphthalene, fluoranthene and triphenylene have been detected by Fourier-transform mass spectrometry (FT MS). Paret ions are produced very efficiently at 250 and 222 nm with pulse energies as low as 1 mJ. With FT MS a complete, high-resolution mass spectrum is obtained for each laser pulse.     

Structure of the naphthalene dimer from rare gas tagging

Excitation spectra of naphthalene dimer-argonn (n = 1-3) clusters are obtained by resonance enhanced multiphoton ionization time-of-flight mass spectroscopy. The spectra are generally independent of the number of attached argon atoms and reveal sharp structures which are fitted by superimposing independent monomer spectra. It is concluded that the rare-gas tagging technique reveals the presence of a T-shaped naphthalene dimer chromophore in the molecular beam.     

An evaluation of atmospheric pressure ionization techniques for the analysis of N-Methyl carbamate pesticides by liquid chromatography mass spectrometry

Atmospheric pressure ionization (API) techniques are evaluated for the mass spectral analysis of N-methyl carbamate pesticides. Atmospheric pressure chemical ionization (APCI) using a heated nebulizer interface provided both protonated molecules and abundant, characteristic fragment ions. With ion spray (ISP; pneumatically assisted electrospray ionization), which utilizes a milder “ion evaporation” process, primarily protonated molecules were obtained, although fragment ions similar to those observed in APCI could be induced by variation of the API orifice voltage. Product ion spectra of ISP-derived protonated molecules, generated by tandem mass spectrometry using collision-induced dissociation, are also presented. The APCI and ISP spectra of the carbamates are compared to those obtained with a thermospray interface and also to their electron ionization and methane CI spectra obtained with a particle beam interface. For all four interfaces, combined liquid chromatography mass spectrometry methods using conventional (4.6 mm i.d.) columns are described for the separation and detection of pesticide mixtures. These methods are applied to the confirmatory analysis of three representative carbamate pesticides, spiked at the 0.1-ppm level in green peppers. For those carbamates amenable to gas chromatography mass spectrometry, comparative results are presented.     

Sequence-specific fragmentation of benzyloxycarbonyl dipeptides by resonance-enhanced multiphoton ionization

The mechanism of fragment ion formation in resonance-enhanced multiphoton ionization (REMPI) of benzyloxycarbonyl (CBZ)-derivitized dipeptides is presented. At 266 nm, the entire multiphoton process can be thought of as a two-part scheme where ionization occurs by resonant two-photon ionization followed by photodissociation of the created ions. When the energy of two photons exceeds the molecular ionization energy by a significant amount, REMPI has the advantage of producing both parent ions and low appearance energy fragments in large amounts. For CBZ dipeptides, resonant two-photon ionization at 266 nm produces parent ions as well as A type sequence ions with high abundance. On the other hand, a three-photon process (resonant two-photon ionization followed by parent ion photodissociation) forms sequence-related ions which also involve complex fragmentations of the CBZ chromophore. These results are compared to mass spectra obtained by other ionization/dissociation methods and to REMPI mass spectra of related compounds. Factors related to molecular structure elucidation based upon REMPI mass spectra are discussed. Enhanced isomer distinction is demonstrated for CBZ-leu-ala-OCH₃ and CBZ-ile-ala-OCH₃ based upon REMPI fragmentation.     

Chemical ionization and electron impact mass spectra of thiosulfinates,thiosulfonates and sulfinyl sulfones

The chemical ionization and electron impact mass spectra of some thiosulfinates, thiosulfonates and sulfinyl sulfones have been studied. The electron impact mass spectra of four of the six thiosulfonates show molecular ions of less than 1%. Inconclusive evidence was obtained for sulfenyl sulfinate type intermediates in the electron impact spectra of thiosulfonates. The electron impact spectra of thiosulfonates were similar to those of thiosulfonates. The chemical ionization (isobutane) mass spectra of thiosulfinates and thiosulfonates generally show protonated molecular ions [MH]⁺ as base peaks and [MH+1]⁺ and [MH+2]⁺ peaks.     

A laser desorption fourier transform mass spectrometric study of dimethyl 8-acetyl-3,7,12,17-tetramethylporphyrin-2,18-dipropanoate

Laser desorption Fourier transform ion cyclotron resonance positive- and negative-ion mass spectra are presented for dimethyl 8-acetyl-3,7,12,17-tetramethylporphyrin-2,18-dipropanoate. The 248-nm laser ionization thresholds for both positive and negative ions are observed to be about 2.5 MW cm^?2. The M⁺˙ molecular ion is assigned to the base peak in the low-power spectra whereas it is the M^?˙ ion for the corresponding anion spectra. Increased intensities of [M + H]⁺ and [M ? H]^? are observed with increased laser fluences of up to 38 MW cm^?2. At high laser powers the negative-ion results reveal that a series of carbon-nitrogen cumulene and polyacetylene cluster ions are formed. Laser evaporation/multiphoton ionization/ and thermal evaporation/electron impact ionization/collision-induced dissociation experiments carried out on the porphyrin M⁺˙ and [M + H]⁺ ions over a range of translational kinetic energies and delay times after acceleration are compared and used to obtain mechanistic and structural information. In contrast to the electron impact experiments, which show only side-chain cleavage, the laser-based collision-induced dissociation experiments reveal that, in addition to side-chain cleavage, it is possible to cleave the porphyrin ring to various extents depending on the ion translational energy selected.     

Influence of charge state and sodium cationization on the electron detachment dissociation and infrared multiphoton dissociation of glycosaminoglycan oligosaccharides

Electron detachment dissociation (EDD) Fourier transform mass spectrometry has recently been shown to be a useful method for tandem mass spectrometry analysis of sulfated glycosaminoglycans (GAGs). EDD produces abundant glycosidic and cross-ring fragmentations that are useful for localizing sites of sulfation in GAG oligosaccharides. Although EDD fragmentation can be used to characterize GAGs in a single tandem mass spectrometry experiment, SO3 loss accompanies many peaks and complicates the resulting mass spectra. In this work we demonstrate the ability to significantly decrease SO3 loss by selection of the proper ionized state of GAG precursor ions. When the degree of ionization is greater than the number of sulfate groups in an oligosaccharide, a significant reduction in SO3 loss is observed in the EDD mass spectra. These data suggested that SO3 loss is reduced when an electron is detached from carboxylate groups instead of sulfate. Electron detachment occurs preferentially from carboxylate versus sulfate for thermodynamic reasons, provided that carboxylate is in its ionized state. Ionization of the carboxylate group is achieved by selecting the appropriate precursor ion charge state, or by the replacement of protons with sodium cations. Increasing the ionization state by sodium cation addition decreases, but does not eliminate, SO3 loss from infrared multiphoton dissociation of the same GAG precursor ions.     

Investigation of some pentasubstituted 1,4-dihydropyridines by means of fast ion bombardment,chemical ionization and electron impact mass spectrometry

Positive fast ion bombardment, positive chemical ionization (CI⁺) and positive electron impact (EI) ionization mass spectrometry were used to investigate a number of relatively large and structurally related organic molecules. Some of the major dissociation pathways observed in the CH₄-CI⁺ mass spectra are not present under NH₃-CI⁺ conditions, but are obtained in the collision-induced dissociation (CID) spectrum of the 50 eV MH⁺ molecular ion, formed in the latter reaction. The resemblance between the EI mass spectra and their fast ion bombardment counterparts, the effect of changing the energy of the bombarding Cs⁺ ion beam over the range 2–16 keV and the different degrees of internal excitation of ions formed in different CI reagent gases are discussed.     

Hydrogen radical/molecule reactions in the negative ion mass spectrometry of dicyano-methane derivatives of 9-fluorenone and benzophenone

Hydrogen radical/molecule reactions are postulated to rationalize the formation of major fragment ions in the methane negative and positive chemical ionization mass spectrometry of the dicyanomethane derivatives of 9-fluorenone and benzophenone. Evidence for the formation of [M + H]^? anions that are not represented by significant peaks in the mass spectra is provided by mass spectra of deuterium-labeled analogs and by tandem mass spectrometry studies of the [M + 1]^? anions of the analyte.     

Mass spectrometric study of organocyclosiloxanes

Organocyclosiloxanes of various chemical structures were studied by mass spectrometry using different ionization methods. The electron ionization mass spectra contain no peaks of molecular ions, and the main fragment ions are formed due to complicated rearrangements in a molecular ion, which provides no comprehensive view about the molecular structure. The desorption spectra exhibit peaks of quasimolecular and fragment ions, which characterize both molecular weights and chemical structures of the compounds under study. Dedicated to Academician G. A. Abakumov on the occasion of his 70th birthday. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1746–1749, September, 2007.     

Multiphoton ionization of molecules: A comparison between femtosecond and nanosecond laser pulse ionization efficiency

Multiphoton ionization mass spectra of nonvolatile molecules laser desorbed into a supersonic beam are recorded. It is shown by indirect measurements that the laser desorption of neutrals is not mass limited, but lead to the formation of neutrals with intesities large enough for intense signals. To investigate the efficiency of the multiphoton ionization process with varying laser pulse durations, simultaneous laser pulses of 500 fs and 5 ns or 100 fs and 5 ns have been applied to the neutral beam. The energies of both femtosecond and nanosecond laser pulses are held in a comparable magnitude, and thus produce, in the resulting ion intensity, very large differences up to 4 orders of magnitude. For larger evaporated molecules (> 500 u) the ionization efficiency from nanosecond laser pulses drops significantly in comparison to femtosecond laser pulse excitation. A variety of possible reasons for the different ionization and dissociation behavior in femtosecond and nanosecond laser pulse excitations are discussed in this paper. It is rationalized that even with very short laser pulses and large molecules the “ladder switching model” for ionization and fragmentation is valid.     

Gas-phase ion-molecule bimolecular and clustering reactions in dilute solutions of acetonitrile in xenon,krypton, argon,neon and helium

Gas-phase bimolecular and clustering reactions of acetonitrile in Xe, Kr, Ar, Ne and He were studied at high chemical ionization pressures in the new coaxial ion source at Auburn. With electron energies near the ionization threshold, the mass spectra are exceedingly simple and are comprised of [CH₄CH]⁺ and clusters of [CH₄CN]⁺ with various ligands such as H₂O and CH₃CN. At higher electron energies many other peaks appear. The intensities of the new peaks depend upon the ionization potential of the charge transfer gas, the ionizing electron energy and the ion source conditions, and are due to reactions of fragment ions. Residence time distributions at electron energies above the ionization threshold (∼ 30 eV) demonstrate that two molecular structures are present in the ion beam at m/z 42, one presumably is protonated acetonitrile ([CH₃CNH]⁺) while the evidence indicates that the second species does not contain acidic hydrogens. With ionizing electron energies near threshold (∼ 10. 5 eV) only one structure is observed. Studies with electron energies near the ionization threshold under high-pressure chemical ionization conditions result in greatly simplified mass spectra and are possible only because of the coaxial geometry of the ion source.     

Mass spectrometric analysis of polymers with potassium-ion ionization of desorbed species

Polymers are analyzed by using a new ionization technique for mass spectrometry called K⁺ ionization of desorbed species (K⁺IDS). This technique utilizes the fact that when thermally labile compounds are placed on a potassium thermionic emitter and rapidly heated, ions representative of the sample are formed. Potassium ion adducts of intact molecules and thermal degradation products are observed. Reported here are the K⁺IDS mass spectra for various polymers; Nylon-6, the cyanoethylmethylsilicone XF-1150, polyvinylpyrrolidone, poly(ethylene glycol) s and a poly (propylene glycol) are studied. Interpretation of the spectra is discussed in terms of known thermal degradation pathways for these molecules. Use of the method for obtaining structural and molecular weight information is discussed. K⁺IDS is shown to be a viable ionization method for such polymers.     

A compact time-of-flight mass spectrometer for the structural analysis of biological molecules using laser desorption.

A compact laser-desorption time-of-flight mass spectrometer using a 600 ps nitrogen laser and 1 Gsample/s transient recorder is described. The instrument incorporates two electrically-isolatable, reflecting flight tubes designed for subsequent configuration of the mass spectrometer as a tandem instrument. In this first report, we compare mass resolution in the laser-desorption mass spectra of an organic dye, sinapinic and caffeic acid matrices, and several small peptides. For directly desorbed ions, peak widths are generally of the order of 11 to 13 ns, so that mass resolution increases with increasing mass. For peptide ions in the range of 500 to 1000 u, formed by matrix-assisted desorption, peak widths range from 9.5 to 17.6 ns and increase with mass. However, better than unit mass resolution (1600 to 2400) is maintained throughout this mass range. Mass measurement accuracy is better than 0.1 u using a single calibration peak and a prompt start trigger pulse. Prospects for extending mass range and resolution are discussed.     

Fingerprinting stereoisomers by survivor-ion mass spectrometry

Survivor-ion mass spectrometry is used to distinguish stereoisomeric cis- and trans-4-methylcyclohexanol. The method involves producing ions by electron impact ionization and submitting them without mass selection to collisional neutralization and reionization, followed by selective monitoring of non-dissociating ions. The differences in the electron impact mass spectra of the stereoisomers, due to the different fragment ion elemental compositions and structures, are highlighted by collisional neutralization with Xe, NO and CH₃SSCH₃, followed by reionization with oxygen. The differences in the survivor-ion spectra are due to different neutralization efficiencies of the isobaric and isomeric ions produced by electron impact ionization, different stabilities of the intermediate neutral species, different reionization efficiencies and reionized ion stabilities. Neutralization-reionization spectra of the C₇H₁₂^+., C₆H₉⁺, C₃H₆O^+. and C₃H₅O⁺ ions from stereoisomeric 4-methylcyclohexanols are also reported.     

Cluster chemical ionization and deuterium exchange mass spectrometry in supersonic molecular Beams

A cluster-based chemical ionization method has been developed that produces protonated molecular ions from molecules introduced through a supersonic molecular beam interface. Mixed clusters of the analyte and a clustering agent (water or methanol) are produced in the expansion region of the beam, and are subsequently ionized by “fly through” electron impact (EI) ionization, which results in a mass spectrum that is a combination of protonated molecular ion peaks together with the conventional EI fragmentation pattern. The technique is presented and discussed as a tool complementary to electron impact ionization in supersonic molecular beams. Surface-induced dissociation on a rhenium oxide surface is also applied to simplify the mass spectra of clusters and reveal the analyte spectrum. The high gas flow rates involved with the supersonic molecular beam interface that enable the easy introduction of the clustering agents also have been used to introduce deuterating agents. An easy-to-use, fast, and routine on-line deuterium exchange method was developed to exchange active hydrogens (NH, OH). This method, combined with electron impact ionization, is demonstrated and discussed in terms of the unique information available through the EI fragmentation patterns, its ability to help in isomer identification, and possible applications with fast gas chromatography-mass spectrometry in supersonic molecular beams.     

Detection of intact hemoglobin from aqueous solution with laser desorption mass spectrometry

Laser induced liquid beam ionization/desorption mass spectrometry (LILBID-MS) is a new desorption method recently developed in our laboratory. This method allows ions to be desorbed directly from the liquid phase into the high-vacuum region of a mass spectrometer. This method has now been applied to the detection of noncovalent protein-protein complexes. The example given in this paper is the quartenary complex of human hemoglobin. For the first time, the intact hemoglobin could be detected by laser desorption mass spectrometry. Furthermore, evidence for the specificity of the complex is given.     

Resonance capture of electrons by substituted pyrazoline molecules

The negative ion mass spectra and photoelectron spectra of substituted pyrazolines were studied. A correlation between the ionization energy of the highest occupied molecular orbital and the yield of [MeNHNH₂ ⁻] ions was found. Isomerization of molecular negative ions was studied by resonance electron capture mass spectrometry. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 701–704, April, 2000.     

Secondary ion mass spectra of oligosaccharides

The mass spectra of oligosaccharides such as glucose, sucrose, lactose and raffinose obtained by static secondary ion mass spectrometry operated at 10^?6 Torr are presented. Cationized molecular ions are observed in high intensity. Fragment ions are compared with daughter ions produced by collision induced dissociation of field desorbed cationized molecular ions.