The photophysics of 7H-adenine: A quantum chemical investigation including spin–orbit effects

Vertical and adiabatic electronic spectra have been investigated by means of combined density functional and multi-reference configuration interaction methods. Spin–orbit coupling has been determined employing a non-empirical spin–orbit mean-field operator. In the vertical absorption spectrum of isolated 7H-adenine, the transitions to the lowest ¹ state, the optically bright ¹ state, and a so far unknown ¹(π_H → (Ryd, σ^*)) state are predicted to lie very close to each other. The strong ¹ transition at 4.8 eV is the lowest excitation of ¹(π → π^*) type in 7H-adenine. It is red shifted by about 0.3 eV with respect to the corresponding excitation in the 9H-tautomer. We find the global minimum on the S₁ potential energy hypersurface at about 4.2 eV for a ¹ electronic structure. A potential well with a minimum at 4.3 eV exhibits mixed ¹ character. A planar ¹ structure with a potential energy of 4.6 eV constitutes a stationary point on the S₁ surface. At the present stage it is unclear whether it corresponds to a minimum or a saddle-point. The lowest-lying ¹(π → (Ryd, σ^*)) state is metastable with respect to N₇–H₁₄ bond dissociation. Its inner (Rydberg) potential well with an adiabatic excitation energy of 4.6 eV represents another minimum on the S₁ PEH. From the theoretical results presented in this work, we conclude that isolated 7H-adenine will be able to emit photons for excitation energies below 4.7 eV(264 nm). Above this threshold singlet excited 7H-adenine can undergo ultrafast non-radiative relaxation to the electronic ground state, either by hydrogen detachment via the ¹(π → (Ryd, σ^*)) channel or via a conical intersection of the ¹ state along a ring puckering mode. The ³ T₁ state can be efficiently populated via intersystem crossing from one of the S₁ potential energy wells. Large-amplitude motions in the T₁ state along an out-of-plane distortional coordinate lead to significant configuration interaction of the ¹ and ¹ structures which lend intensity to the phosphorescence.     

Is Cd2 truly a van der Waals molecule? Analysis of rotational profiles recorded at the , transitions

Rotational profiles of the ²²⁸Cd₂ isotopomer recorded in the (υ′, υ″) = (26, 0), (27, 0), (42, 0), (45, 0), (46, 0), (48, 0) vibrational bands of the transition were analysed. As a result, the , , , , and excited- as well as the ground-state rotational constants of the (¹¹⁴Cd)₂ were determined. The analysis allowed determining the absolute values for the and excited- and ground-state bond lengths, respectively. The obtained result – the – distinctly shorter than that obtained with assumption of pure ground-state van der Waals bonding, supports a theoretical prediction of a covalent admixture to the bonding. Analysis of the partially-resolved rotational profile recorded in the (υ′, υ″) = (38, 0) band of the same isotopomer recorded at the transition allowed estimating the rotational constant in the B1_u state.     

Ab initio electronic and rovibrational structure of

The electronic structure of the ground state of has been investigated using relativistically-corrected CCSD(T) in conjunction with ANO-RCC (Mg) and aug-cc-pVQZ (H) basis sets. The molecular potential energy surface possessed minima corresponding to both ¹A₁ and equilibrium structures (with a ¹Σ⁺ transition state). The ¹A₁ structure possessed R_e and θ_e values of 2.0297 Å and of 22.09°, respectively. The higher-energy structure exhibited an R_e value of 2.1658 Å. Property surfaces were constructed to calculate rovibrational energies and spectral line intensities for the ground states of , (¹A′) MgHD²⁺ and . For the vibration ground state of , the vibration-averaged R_e and θ_e values were calculated to be 2.0209 Å and 22.53°, respectively. The A, B and C rotational constants were calculated to be 58.0, 2.21 and 2.11 cm⁻¹, respectively.     

Intense laser-induced decomposition of mass-selected 2-, 3-, and 4-methylaniline cations

Photodecomposition processes of 2-, 3-, and 4-methylaniline cations induced by a moderately intense (10¹¹ W/cm²) visible nanosecond laser field and an intense (10¹⁵ W/cm²) UV femtosecond laser field have been investigated using a tandem mass spectrometer. Highly unsaturated fragment cations such as and are dominantly produced by the nanosecond laser, while less unsaturated smaller fragment cations such as , and are produced mainly by the femtosecond laser. Ab initio calculations have also been performed to estimate the stable geometrical structures of and and those of possible intermediate ring compounds for discussing the photodecomposition pathways in intense laser fields.     

The mechanism of nitrogen fluorescence inside a femtosecond laser filament in air

The visible and near-UV fluorescence spectroscopy of air generated inside a femtosecond laser plasma filament was studied. The primary reactions, , populates the electronic excited state N₂(C³П_u) of N₂. The N₂ fluorescence is not by direct electron–ion recombination of . Using a pump–probe method, the fluorescence lifetime of C³П_u of N₂ at atmospheric pressure was determined to be about 85 ps.     

Modeling of vibration–electronic–chemistry coupling in the atomic–molecular oxygen system

The comprehensive analysis of the kinetic processes in the atomic–molecular oxygen system is conducted on the base of the novel state-to-state model involving both electronically and vibrationally excited O₂ molecules: and O(³P), O(¹D) atoms as well as vibrationally excited O₃(¹A₁) molecules. The model describes properly experimental data on the total removal rate of vibrationally excited molecules, the temporal evolution of the population of , and on the variation of vibrational temperature of behind strong shock wave. It is demonstrated that to describe with reasonable accuracy the variation of macroscopic flow parameters (pressure, temperature, density, and velocity) in the post shock region it is sufficient to use the widely applied model of mode approximation but in order to predict properly the species concentrations and populations of vibronic states of molecules just downstream the shock front it is needed to use state-to-state consideration.     

Electron correlation contribution to the /ceria(1 1 1) interaction

We have investigated the electron correlation contribution to the interaction energy of the N₂O/ceria(1 1 1) system at the CCSD(T) level. N₂O binds either with the N-end towards the surface with an interaction energy or with the O-end with . In the former case almost the entire binding energy is due to electron correlation effects, in the latter these effects contribute with about 60%. Analyses of the interaction energy contributions show that most of the electron correlation part originates from the interaction of N₂O with the O ions in the topmost surface layer.     

Unique charge ordering of manganese in a new mixed valent phosphate

A new mixed-valent manganese phosphate, , has been synthesized using hydrothermal method. Its monoclinic C2/c structure (a=12.5506(16) Å, b=10.4816(18) Å, c=13.6723(10) Å, β=103.758(11)°) forms a 3D framework of MnO₆ octahedra, MnO₅ trigonal bipyramids, PO₄ and PO₃OH tetrahedra. The main structural feature of this phosphate deals with its [Mn₄O₁₆]_∞ chains running along , which are interconnected through PO₄ and PO₃OH tetrahedra, forming intersecting tunnels running along [110], and [001]. The geometry of the [Mn₄O₁₆]_∞ chains and the charge ordering of manganese in the latter are unique: they consist of trimeric units of divalent manganese “” alternating with single trivalent Mn^IIIO₆ octahedra along . In each “” unit one central Mn^IIO₆ octahedron shares two opposite edges with two Mn^IIO₅ trigonal bipyramids. Along , one Mn(II) octahedron alternates with one Mn(III) octahedron by sharing one corner. The relationships between the structure of this unique charge ordered phosphate and other manganese phosphates are discussed.     

Franck–Condon simulation of photoelectron spectroscopy of HOO: Including Duschinsky effects

Geometry optimization and harmonic vibrational frequency calculations were performed on the and states of HOO and state of HOO⁻. The electron affinity and the term energy () of HOO were calculated at various theory levels. Franck–Condon analyses and spectral simulations were carried out on the and photodetachment processes. The spectral simulations of vibrational structures based on the computed Franck–Condon factors are in excellent agreement with the observed spectra. In addition, the equilibrium geometrical parameters of the state of HOO⁻ and state of HOO were obtained in the spectral simulations.     

Auger recombination dynamics in clusters

Electronic relaxation dynamics following interband excitation from the 6s to the 6p band in mass selected clusters are measured through femtosecond time-resolved photoelectron imaging (TRPEI). This interband transition is pumped at 4.65 eV and probed at 1.55 eV. Auger decay of occurs on a timescale of 490 ± 100 fs, and a similar time constant is seen for the transient excited state population created by the pump pulse. These time constants are an order of magnitude faster than those seen in previous experiments in which the lone p-electron in was excited within the p-band. The results presented here imply that substantial relaxation of either electrons in the p-band or the hole in the s-band takes place prior to Auger emission, with electron–electron scattering playing a key role in the fast observed dynamics.     

Nucleophilic and electrophilic radical attack on maleic and fumaric acids in aqueous solution

Rate coefficients (k) of CH₂OH, , and radical addition to maleic and fumaric acids were investigated between pH 1 and 8. Strong pH dependences observed were attributed to changes in protonation states of acids: H₂X, HX⁻ and X²⁻. k of CH₂OH, , addition to fumaric acid decreased in the order k_H2F>k_HF^->k_F^2- in agreement with the nucleophilic character of reaction. The electrophilic radical showed opposite tendency. With maleic acid the monoanion had the highest reactivity towards nucleophilic and the lowest one towards electrophilic radicals. This is attributed to a prevalence of steric over polar effects for HM⁻.     

Control of laser induced molecular fragmentation of n-propyl benzene using chirped femtosecond laser pulses

We present the effect of chirping a femtosecond laser pulse on the fragmentation of n-propyl benzene. An enhancement of an order of magnitude for the relative yields of and in the case of negatively chirped pulses and in the case of positively chirped pulses with respect to the transform-limited pulse indicates that in some fragmentation channel, coherence of the laser field plays an important role. For the relative yield of all other heavier fragment ions, resulting from the interaction of the intense laser field with the molecule, there is no such enhancement effect with the sign of chirp, within experimental errors. The importance of the laser phase is further reinforced through a direct comparison of the fragmentation results with the second harmonic of the chirped laser pulse with identical bandwidth.     

Molecular fine structure and transition dipole moment of NO2 using an external cavity quantum cascade laser

Rotational vibrational fine structure and transition dipole moment of NO₂ is measured using Doppler free saturation spectroscopy with an external grating cavity quantum cascade laser (QCL). The QCL wavelength is calibrated using a 310 cm long internally coupled Fabry–Perot interferometer. We obtain a frequency splitting of 139.68 ± 0.06 MHz (0.0047 cm⁻¹) between the spin doublets (17) of 000 → 001 transition of NO₂. The resolution of the QCL based saturation spectrometer is limited by the QCL linewidth of 3.99 MHz ( 0.00013 cm⁻¹) deduced from the half width of the Lamb dips. The Lamb dip spectroscopy is utilized to obtain a vibrational dipole moment of 0.37 Debye for the (17) transitions.     

Imaging attosecond coherent electron motion in molecules

Molecular high harmonic generation (MHOHG) is obtained from numerical solution of the time dependent Schrödinger equation (TDSE) for the 3-D one electron linear system exposed to ultrashort (two-cycle) intense (I = 10¹⁴ W/cm²) IR laser pulse in order to illustrate and image coherent electron motion on attosecond (1 asec = 10⁻¹⁸ sec) time scale. Such electron motion can occur in electron wavepackets created by nonadiabatic interactions at avoided crossings near conical intersections or by asec photoexcitation. It is found that the MHOHG spectra can monitor electron localization on asec time scale.     

Photoelectron spectroscopic study of iron–benzene cluster anions

Iron–benzene cluster anions, (n = 1–7, m = 1–4), were generated via laser vaporization and studied using mass spectrometry, anion photoelectron spectroscopy and in one case by density functional theory. Based on these studies, we propose that and Fe₁Bz₁ as well as and Fe₂Bz₁ exhibit half-sandwich structures, that and Fe₁Bz₂, and Fe₂Bz₂, as well as Fe₃Bz₂ and Fe₄Bz₂ are sandwich structures, and that and Fe₂Bz₃ and larger species form ‘rice-ball’ structures which in each case consist of benzene molecules surrounding an iron cluster core.     

Self-assembly, crystal structure and photoluminescent properties of a novel organic–inorganic hybrid coordination polymer: [CdCl3(CH3)3NH]

A novel organic–inorganic coordination polymer [CdCl₃(CH₃)₃NH] 1 was synthesized by the reaction of CdCl₂ with trimethylamine (TMA) at 170 °C for 5 days in ethanol and structurally characterized by means of X-ray single diffraction. The title compound affords a one-dimensional chain structure. It crystallizes in hexagonal system space group P6(3)/m with , , , γ=120.00°, , Z=2, , F(000)=266, Mr=277.86, , the final R=0.0420 and ωR=0.1020 for 355 observed reflections with I>2σ(I). The title compound consists of cation [(CH₃)₃NH]⁺ and anion chain , and they are combined by static attracting forces in the crystal. TG–DTA, XRD and IR data for the title compound are reported and discussed. The photoluminescent properties of the compound 1 were also investigated.     

A TEM investigation of the (Bi1−xSrx)FeO3−x/2, 0.2≤x≤0.67, solid solution and a suggested superspace structural description thereof

A careful transmission electron microscopy (TEM) investigation of an incommensurately modulated member of the (Bi_1−xSr_x)Fe³⁺O_3−x/2□_x/2, 0.2≤x≤0.67, solid solution has been carried out. High resolution (HR) TEM imaging is used to show the presence of at least 6-fold twinning on a rather fine (5 nm) scale. The (3+1)-d superspace group symmetry is suggested to be or one of the non-centrosymmetric sub-groups thereof, namely , , and . A superspace construction is then used to propose the nature of the local compositional ordering and, hence, of the oxygen-deficient slab that intergrows with the perovskite slab to produce the observed solid solution phase. The proposed compositional superspace atomic surfaces can be used to produce model structures at any composition within the solid solution range.     

Spectroscopy of Ru(II) polypyridyl complexes used as intercalators in DNA: Towards a theoretical study of the light switch effect

The absorption spectroscopy of [Ru(phen)₂dppz]²⁺ and [Ru(tap)₂dppz]²⁺ (phen = 1,10-phenanthroline, tap = 1,4,5,8-tetraazaphenanthrene; dppz = dipyridophenazine) complexes used as molecular light switches by intercalation in DNA has been analysed by means of Time-Dependent Density Functional Theory (TD-DFT). The electronic ground state structures have been optimized at the DFT (B3LYP) level of theory. The absorption spectra are characterized by a high density of excited states between 500 nm and 250 nm. The absorption spectroscopy of [Ru (phen)₂dppz]²⁺ in vacuum is characterized by metal-to-ligand-charge-transfer (MLCT) transitions corresponding to charge transfer from Ru(II) either to the phen ligands or to the dppz ligand with a strong MLCT () absorption at 411 nm. In contrast, the main feature of the lowest part of the vacuum theoretical spectrum of [Ru(tap)₂dppz]²⁺ between 522 nm and 400 nm is the presence of various excited states such as MLCT (), ligand-to-ligand-charge-transfer LLCT () or intra-ligand IL () states. When taking into account solvent corrections within the polarizable continuum model (PCM) approach (H₂O, CH₃CN) the absorption spectrum of [Ru(tap)₂dppz]²⁺ is dominated by a strong absorption at 388 nm (CH₃CN) or 390 nm (H₂O) assigned to a ¹IL () corresponding to a charge transfer from the outside end of the dppz ligand to the site of coordination to Ru(II). These differences in the absorption spectra of the two Ru(II) complexes have dramatic effects on the mechanism of deactivation of these molecules after irradiation at about 400 nm. In particular, the electronic deficiency at the outside end of the dppz ligand created by absorption to the ¹IL state will favour electron transfer from the guanine to the Ru(II) complex when it is intercalated in DNA.     

Adsorption of the first row of transition metals on the perfect and defective MgO(1 0 0) surface

We present DFT calculations for adsorption of the first row of transition metal atoms on a MgO(1 0 0) surface and on a surface exhibiting defects. Some atoms exhibit a high adsorption energy on the defect (e.g. Co, Ni and Cu), but others (Ca, Sc) rather adsorb on a clean surface and another set is indifferent to the presence of defect. The adsorption becomes energetically unfavorable when the σ anti-bonding orbitals become populated; this is worse on a defective surface than on a terrace. The π back-donation to the surface contributes to favor the adsorption on the center.