Two compounds constructed from Strandberg-type polyoxoanions,metals and organic ligands

Two new hybrid compounds, [Cu(1)(phen)(H₂O)][Cu(2)(phen)(H₂O)]([Cu(3)]_0.25(H₂O)][P₂Mo₅O₂₃]·3.75H₂O (1) and [Cu(en)₂]_1.5[P₂Mo₅O₂₃]₂·(enH₂)₃·2H₂O (2) (phen = 1,10-phenanthroline, en = ethylenediamine), have been hydrothermally synthesized and characterized by IR, UV–Vis spectroscopy, X-ray photoelectron spectroscopy (XPS), powder XRD analyses, TG analyses, cyclic voltammogram analyses, elemental analyses, and single crystal X-ray diffraction analyses. Single crystal X-ray diffraction analyses reveal that the two compounds have a 1-D chain structure formed by Strandberg-type POMs and TMCs with –A–B–C–B–A–B–C–B– linking mode, then further extend into a 2-D layer structure through π?π or hydrogen bond interactions.     

Copper(II) coordination polymers constructed from aromatic polycarboxylate and flexible triazole ligands with different spacer lengths: syntheses,structures, and properties

{[Cu₂(btm)₂(Hbtc)(H₂btc)₂(H₂O)]·9.5H₂O}_n (1), [Cu(bte)(H₂btc)₂]_n (2) {[Cu(btp)(H₂btc)₂]·0.25H₂O}_n (3) (btm?=?bis(1,2,4-triazol-1-yl)methane, bte?=?bis(1,2,4-triazol-1-yl)ethane, btp?=?bis(1,2,4-triazol-1-yl)propane, H₃btc?=?benzene-1, 3, 5-tricarboxylic acid) have been synthesized and structurally characterized. 1 features a 1-D double chain, which is interconnected by classical hydrogen-bonding (O–H?O) and π–π interactions to lead to a 3-D supramolecular architecture. 2 and 3 are both 1-D single chains, which are interconnected by π–π interactions to 2-D layer architectures. Elemental analysis, XRD, IR, TG and EPR spectra have been carried out and discussed.     

Synthesis,structures, and characterization of cadmium(II), cobalt(II), and copper(II) metal polymers with tetrazole-1-acetate

Three new coordination polymers {[Cd(tza)(2,2′-bpy)(H₂O)](ClO₄)} _n 1, {[Co(tza)(2,2′-bpy)(H₂O)](ClO₄)} _n 2, and {[Cu(tza)(phen)](ClO₄)} _n 3 (Htza = tetrazole-1-acetic acid, 2,2′-bpy = 2,2′-bipyridyl, phen = 1,10-phenanthroline) were synthesized and characterized by X-ray single-crystal diffraction, elemental analysis, and IR spectra. Complexes 1 and 2 exhibit 3-D architectures formed by π–π interaction of 2,2′-bpy ligands interlinking to the adjacent 2-D layers. Complex 3 is a 1-D zigzag double chain and the 3-D structure is formed by π–π stacking interaction of phen and nonclassical hydrogen bonding.     

Variation in crystalline architectures through supramolecular interactions in copper(II) complexes with tridentate N2O donor Schiff bases

Three copper(II) complexes, [Cu(L¹)(H₂O)(ClO₄)]·0.5H₂O (1), [Cu(L²)(H₂O)(ClO₄)]·0.5H₂O (2), and [Cu(L²)(NCNC(OCH₃)NH₂)]ClO₄ (3), where HL¹ = 4-bromo-2-(-(quinolin-8-ylimino)methyl)phenol and HL² = 1-(-(quinolin-8-ylimino)methyl)naphthalen-2-ol, have been prepared and characterized by elemental analysis, IR, UV–vis and fluorescence spectroscopy and single-crystal X-ray diffraction studies. The copper(II) centers assume five-coordinate square-pyramidal geometries in 1 and 2, whereas square planar copper(II) is present in 3. A methanol molecule has been inserted in the pendant end of the ligated dicyanamide in 3. Various supramolecular architectures are formed by hydrogen bonding, π?π, C–H?π, and lp?π interactions.     

Electrochemical and Biological Studies on Reactivity of [VO(oda)(H2O)2], [Co(oda)(H2O)2]·H2O,and [Ni(oda)­(H2O)3]·1.5H2O Towards Superoxide Free Radicals

The reactivity of superoxide free radicals (O₂ ^{· –}) generated electrochemically towards the oxydiacetate metal complexes, namely [VO(oda)(H₂O)₂], [Co(oda)(H₂O)₂] · H₂O, and [Ni(oda)(H₂O)₃] · 1.5H₂O (oda = oxydiacetate) was examined by cyclic voltammetry. The measurements were carried out in DMSO solution using a platinum electrode. Based on the height of the anodic peak E_a that corresponds to electrochemical oxidation O₂ ^{· –} → O₂ + e, in the absence and in the presence of the compounds in the mixture, their O₂ ^{· –} scavenge ability was assessed. The influence of the type of the complex was briefly discussed. H₂O₂ was used to induce cellular injury in a mouse hippocampal cell line (HT22). The cytoprotection of chemical compounds was tested at the mitochondrial (MTT test) and plasma membrane level (LDH leakage). Dose‐dependent effect (10 and 100 μM of the complex) of investigated compounds was observed.     

Four Cu(II)/Co(II) coordination polymers based on N,N′-di(3-pyridyl)sebacicdiamide: influence of different carboxylate ancillary ligands on structures and properties

Four Cu(II)/Co(II) coordination polymers, [Cu(L)(BDC)(H₂O)]·3H₂O (1), [Cu(L)(DNBA)₂] (2), [Co(L)₂(DNBA)₂] (3), and [Co(L)(NIPH)(H₂O)]·H₂O (4) (H₂BDC = 1,4-benzenedicarboxylic acid, HDNBA = 3,5-dinitrobenzoic acid, H₂NIPH = 5-nitroisophthalic acid, L = N,N′-di(3-pyridyl)sebacicdiamide), have been synthesized under hydrothermal conditions. The structures of 1–4 have been determined by single-crystal X-ray diffraction analyses and 1–4 were further characterized by infrared spectroscopy and thermogravimetric analyses. Complex 1 is a 2-D polymeric layer with a 4-connected sql topology. Complex 2 displays a 1-D zigzag chain. Complex 3 possesses a 1-D double-chain structure. Complex 4 exhibits a ribbon chain based on the 1-D [Co–L]_nmeso-helical chain. Adjacent layers for 1 and adjacent chains for 2–4 are further linked by hydrogen bonding or π–π stacking interactions to form 3-D supramolecular networks. The differences of carboxylates and metal ions show significant effect on the ultimate architectures of the four complexes. Thermal stabilities, fluorescent properties and photocatalytic activities of 1–4 were also studied.     

A lead(II) coordination polymer containing 2-carboxycinnamic acid and 1,10-phenanthroline and its 3-D supramolecular network

The coordination polymer {[Pb(cca)(phen)]H₂O} _n (H₂cca?=?2-carboxycinnamic?acid and phen?=?1,10-phenanthroline) was synthesized by hydrothermal reaction and structurally characterized by single-crystal X-ray diffraction. The complex possesses a 1-D chain structure composed of infinite Pb-cca-Pb linkages, in which the [PbO₄N₂] subunits are linked by bridging cca in bis(chelating-bridging) coordination mode. The coordination around the lead(II) is hemi-directed and weak Pb···O interactions are observed that result in a double-chain structure. The chains are combined to generate a 3-D supramolecular structure through interchain C–H···π, C–H···O, and π···π stacking interactions. Fluorescence of the complex originates from π*–π transitions of the ligand.     

Metal complexes with N-(trifluoromethylbenzyl)iminodiacetate chelators (x-3F ligands). Part I. Copper(II) chelates of p-3F,m-3F,and o-3F with or without imidazole-like ligands

Eight Cu(II) complexes with N-(p-, m- or o-trifluoromethylbenzyl)iminodiacetate chelators (x-3F ligands) have been synthesized to promote C–F/H interligand interactions involving the F₃C-group: {[Cu(μ₂-p-3F)(H₂O)]·3H₂O]}_n (1), [Cu(m-3F)(H₂O)₂] (2), [Cu(p-3F)(Him)(H₂O)] (3), [Cu(m-3F)(Him)(H₂O)] (4), [Cu(o-3F)(Him)(H₂O)] (5), [Cu₂(p-3F)₂(H5Meim)₂(H₂O)₂] (6), [Cu(m-3F)(H5Meim)(H₂O)] (7), and [Cu(o-3F)(H5Meim)(H₂O)] (8) [Him and H5Meim = imidazole and the “remote” tautomer 5-methylimidazole, respectively]. The compounds were studied by single-crystal X-ray diffraction, FT-IR, electronic spectra and coupled thermogravimetric + FT-IR methods. The conformation of the iminodiacetate chelating moiety (IDA group) is fac-NO + O(apical) in 1 and mer-NO₂ in 2–8. The fac-IDA conformation observed in 1 is related to its polymeric structure and the coordination of a O’-carboxylate donor, from an adjacent complex unit, trans to the Cu–N(IDA) bond. The mer-IDA conformation in 2 is in agreement with similar compounds with an aqua ligand trans to the corresponding Cu–N(IDA) bond. As expected, the ternary complexes 3–8 feature a mer-IDA conformation. Some of the studied complexes exhibit disorder in the –CF₃ group and C–H?F interligand interactions along with conventional N–H?O and O–H?O interactions. The thermal decomposition of all studied compounds under air flow produces variable amounts of trifluorotoluene.     

Enhancement of the biochemical activity of some market antibiotics by chemical modification: Synthesis,characterization, and biochemical evaluation

The reaction of isatin with the Ampicillin gave the new compound: (6R)‐3,3‐dimethyl‐7‐oxo‐6‐(2‐(([E]‐2‐oxoindolin‐3‐ylidene)amino)‐2‐phenylacetamido)‐4‐thia‐1‐azabicyclo[3.2.0]hept ‐ane‐2‐carboxylic acid (HAI). The new complexes derived from HAI and Co(II), Ni(II), Cu(II), Eu(III), and Gd(III) were obtained in pure form. The obtained compounds were characterized by elemental analysis, FTIR, UV–Vis, Fluorescence, ¹HNMR, Mass spectra, DTA, TGA, Magnetic susceptibility, X‐ray, AAS, and the conductivity of 0.001 M in DMSO. The obtained data indicated the formation of the target complexes: [Co(HAI)(H₂O)(NO₃)]NO₃.4H₂O, [Ni(AI)(H₂O)₂]Cl.2H₂O, [Cu(AI)]Cl.H₂O, [Eu(AI)(H₂O)Cl]Cl.5H₂O and [Gd(AI)(H₂O)(NO₃)]NO₃.3H₂O. The ligation sites were predicted from the guide of the FTIR and thermal analysis meanwhile the stereochemistry was proved by the UV–Vis and magnetic moment. Co(II) and Ni(II) gave an octahedral structure while Cu(II) gave a square planar form. Molecular modeling, molecular mechanics, and DFT calculations were carried out for the synthesized compounds. The active lone pair and surface properties were obtained and discussed in the silico level. The x‐ray analysis indicates the nanoparticle behavior of the Cu‐AI complex with a monoclinic structure. The interactions of the synthesized complexes with FM‐DNA moiety were investigated through spectrometric titration (UV–vis. spectra) and by using fluorescence spectroscopy. The modes and binding affinities were evaluated and discussed using Benesi–Hildebrand method. Antimicrobial activities of the synthesized compounds have been screened using the disc diffusion method. HAI and Cu‐AI gave activity exceeded the Ampicillin. The docking work was carried using the targeting protein of Escherichia coli FabH (PDB code: 1HNJ). The obtained binding energy was compared and discussed in terms of the in vitro studies.     

Syntheses,Structures, and Magnetic Properties of Two Novel Cobalt(II) Coordination Polymers Constructed from Pyridine‐2,6‐dicarboxylic Acid N‐oxide (PDCO)

Two new cobalt(II) coordination polymers, [Co(PDCO)(H₂O)₂]_n ( 1 ) and [Co(PDCO)(bix)(2H₂O)₂·H₂O]_n ( 2 ) ( PDCO= pyridine‐2,6‐dicarboxylic acid N‐oxide, bix = 1,4‐bis(imidazol‐1‐ylmethyl)‐benzene) have been synthesized under hydrothermal conditions. Single‐crystal X‐ray analyses show that compound 1 is a 1D helical chainlike structure with 4₁ screw axes parallel to the crystallographic c‐axis and interchain hydrogen‐bonding interactions further result in a 3D framework; for compound 2 , each bix ligand connects two Co1 atoms (or two Co2 atoms) to give a zigzag chain structure and these 1D chains are connected by offset face‐to‐face π···π and hydrogen bond interactions to generate a 3D architecture. The thermogravimetric analyses were investigated for 1 and 2 . The determination of variable temperature magnetic susceptibilities indicates an antiferromagnetic interaction between the metal atoms for 1 and 2 .     

[Ni(bpy)(mal)(H2O)3]·H2O and [Ni(4,4′-dmbpy)(mal)(H2O)3]·1.5H2O: syntheses,crystal structures,magnetic properties,and computational study of stacking interactions

[Ni(bpy)(mal)(H₂O)₃]·H₂O and [Ni(4,4′-dmbpy)(mal)(H₂O)₃]·1.5H₂O (mal = maleato; bpy = 2,2′-bipyridine; 4,4′-dmbpy = 4,4′-dimethyl-2,2′-bipyridine) exhibit molecular crystal structures. The Ni(II) central ions in both complexes are six-coordinate by one chelate bonded L–L ligand, three aqua ligands, and one position is occupied by a maleato oxygen donor atom. Hydrogen bonded ribbon-like supramolecular structural motifs are present in both studied complexes; these are linked by weaker C–H?O hydrogen bonds in [Ni(bpy)(mal)(H₂O)₃]·H₂O, whereas in [Ni(4,4′-dmbpy)(mal)(H₂O)₃]·1,5H₂O the hydrogen bonded ribbons are linked by O?H-O-H?O hydrogen bonds with the participation of the additional water solvate molecule positioned on the twofold axis. In both structures, π–π stacking interactions with different patterns in respective structures were found. The role of dispersion energy and many-body effects in the stabilization of bpy and 4,4′-dmbpy stacking interactions were investigated using methods of computational chemistry. Those confirm the dispersion-dominated stabilization of the 4,4′-dmbpy supramolecular chain-like structure, with only marginal impact of cooperativity effects. Thermal decompositions of both complexes start with dehydration. Magnetic susceptibility studies performed from 2 to 300 K revealed a dominant effect of the zero-field splitting of the Ni(II) ion, governing the low-temperature magnetic properties of both compounds.     

具有分子内折叠结构锌配合物的合成，与DNA键合及其对DNA切割作用研究

本文报道了一个锌配合物[Zn(bipy)(pmal)(H2O)]·2H2O（其中bipy = 2,2’-联吡啶, pmal = 苯基丙二酸）的合成,晶体结构及其光谱学研究。并通过单晶X射线衍射,元素分析,红外光谱等手段对它进行了表征。同时,利用紫外光谱和荧光光谱方法考察了该配合物与小牛胸腺DNA的键和作用。琼脂糖凝胶电泳实验的结果说明该配合物的平面结构对pBR 322DNA切割作用显著。     

A Novel Mixed‐Ligand Manganese(II) Complex Containing a V‐shape Water Trimer: Synthesis,Structure and Magnetic Properties of {[Mn(azpy)2(dca)(H2O)2](ClO4)(azpy)(H2O)2}n

A novel mixed‐ligand complex {[Mn(azpy)₂(dca)(H₂O)₂](ClO₄)(azpy)(H₂O)₂}_n ( 1 ) has been synthesized and characterized by single crystal X‐ray analysis, elemental analysis, IR spectroscopy and variable temperature magnetic measurement. The 4,4′‐azopyridine and dicyanamide ligands are abbreviated as azpy and dca, respectively. The crystal structure of 1 revealed that the 1D covalent bonding chains constructed by μ_1,5‐dca bridging the Mn^II ions are linked together via O–H···N and O–H···O hydrogen bonds and π‐π stacking interactions into a 3D supramolecular structure. V‐shape (bent) water trimers were also found in the structure. The water clusters play an important role in the formation of the 3D supramolecular structure. The determination of the variable temperature magnetic susceptibilities (2–300 K) shows the existence of a very weak antiferromagnetic interaction with a J value of ?0.16 cm^?1.     

The supramolecular assembly of tetraaqua-(pyridine-2,5-dicarboxylato)-copper(II) complex: crystal structure,TD-DFT approach,electronic spectra,and photoluminescence study

The copper(II) complex, {[Cu(2,5-pdc)(H₂O)₄]·H₂O} (1) [2,5-pdc?=?pyridine-2,5-dicarboxylate], has been synthesized and characterized by elemental analysis, IR spectroscopy, and X-ray crystallography. The metal shows a distorted octahedral coordination sphere and in solid state the complex forms a 3-D supramolecular network via hydrogen bonding and off-center anti-parallel π–π stacking interactions between py rings. At room temperature, 1 exhibits fluorescence in methanolic solution [λ_ex?=?226?nm, λ_em?=?309, 330, and 341?nm]. The geometry optimization at the B3LYP/LanL2DZ level led to a five-coordinate copper having a distorted square pyramidal geometry. The electronic spectrum of this compound is compared with the results obtained by employing density functional theory (DFT) and time dependent density functional theory calculations.     

Crystal structure and spectroscopic properties of a new syn-anti carboxylate-bridged polymeric chain copper(II)–glycylglycine complex

A new polymer complex of copper(II)–glycylglycine?{[Cu(glygly)(H₂O)][Cu(glygly)(H₂O)₂]} _n ·5nH₂O (1) is reported. It crystallizes in the P2₁/c space group, with a?=?14.669(2), b?=?9.8480(10), c?=?14.053(2)?Å,?β?=?102.730(10)°?and Z?=?4. Compound 1 consists of [Cu(glygly)(H₂O)] _n 1D carboxylate-bridged polymeric chains, monomer Cu(glygly)(H₂O)₂ molecules which form hydrogen-bonded chains and uncoordinated water molecules. In all cases, the geometry around copper(II) is a slightly distorted square pyramid with the water oxygen at the apex of the pyramid. The ESR, UV-Vis and IR spectroscopy of the compound were also studied.     

Novel Copper(II) Thiodibenzoic Acid Coordination Polymers by in situ Extrusion of Sulfur from 2,2′‐Dithiodibenzoic Acid and the Unique Oxidation of Disulfide to Sulfate

Slow diffusion reaction of 2,2′‐dithiodibenzoic acid (dtdb) with CuCl₂ in the presence of N‐donor ligands results in the formation of different coordination polymers where both S–S and C–S scission and oxidation of S is observed. X‐ray diffraction analysis of [Cu(tdb)(phen)(H₂O)]₂ · 2H₂O.2DMF] ( 1 ), [Cu(tdb)(py)₂(H₂O)]₂ ( 3 ), and [Cu(tdb)(bipy)(H₂O)]₂ · 0.5H₂O ( 4 ) (tdb = thiodibenzoic acid, phen = phenanthroline, py = pyridine, bipy = 2,2′‐bipyridine) show that the metal ions are coordinated to the carboxylate oxygen atoms of the in situ generated tdb ligand in a monodenate fashion. In [Cu(phen)(SO₄)₂(H₂O)₂]_n ( 2 ) and [Cu(bipy)(SO₄)₂(H₂O)₂]_n ( 5 ), the sulfur is oxidized to sulfate ions prior to coordination with the metal. Complex 1 has a dimeric structure with π–π interactions between the phen ligands, whereas 3 and 4 form 1D polymeric chains.     

Synthesis and structural characterization of lanthanide oxalate–oxydiacetate mixed-ligand coordination polymers {[Ln(oda)(H2O) x ]2(ox)} n ( x = 3 for Ln = La,Ce, Pr,Gd, Tb and x = 2 for Ln = Er)

Reactions of oxydiacetic acid (H₂oda) with lanthanide oxide, nitrate, chloride, and carbonate gave six lanthanide oxalate–oxydiacetate mixed-ligand coordination polymers {[Ln(oda)(H₂O) _x ]₂(ox)} _n [x = 3 for Ln = La, Ce, Pr, Gd, Tb, (1–5), and x = 2 for Ln = Er (6)]. Oxydiacetic acid is decomposed into oxalic acid in this reaction. In the crystal structures of 1–6, oxydiacetate and the lanthanides build a chain, and the oxalate groups bridge two chains to form 1-D double-chain ladder-shaped structures, connected by intermolecular hydrogen bonds to form a 2-D network structure. These compounds contain approximately 3.0 × 6.4 Ų channels along the c-axis. The infrared spectra and thermal behaviors of 1–6 are also investigated.     

Poly­[[bis­(pyridine‐κN)copper(II)]‐μ3‐5‐hydroxy­isophthalato‐κ3O:O′:O′′]

In the title compound, [Cu(C₈H₄O₅)(C₅H₅N)₂]_n or [Cu(OH‐BDC)(py)₂]_n (where OH‐H₂BDC is 5‐hydroxy­isophthalic acid and py is pyridine), the Cu atoms are coordinated by two N atoms from the pyridine ligands and by three O atoms from hydroxy­isophthalate ligands in a highly distorted triangular bipyramidal environment, with Cu—O distances in the range 1.941 (4)–2.225 (5) Å and Cu—N distances of 2.014 (6) and 2.046 (6) Å. The [Cu(OH‐BDC)]_n two‐dimensional network is built up from interlocking 22‐, 15‐ and eight‐membered rings via sharing of Cu atoms and O—H⋯O hydrogen bonds. Consolidation of the packing structure is achieved by edge‐ or point‐to‐face C—H⋯π interactions and offset or slipped π–π stacking interactions.     

Melamine-mediated self-assembly of a Cu(II)–methylmalonate complex assisted by π+–π+ and anti-electrostatic H-bonding interactions

A Cu(II)-methylmalonate complex, (C₃H₇N₆)₄[Cu(II)(C₄H₄O₄)₂](H₂O)₄Cl₂ (1) (where C₃H₇N₆ = protonated melamine, C₄H₄O₄ = methylmalonic acid), has been synthesized from aqueous media and its crystal structure was determined by single-crystal X-ray diffraction. The anionic Cu(II)-methylmalonate complex mediated formation of interesting supramolecular assemblies in the solid state by means of ionic interactions with protonated melamine. Moreover, other forces such as antielectrostatic H-bonding and π⁺–π⁺ interactions also play a crucial role in defining the final 3-D architecture of 1. An interesting stacking among protonated melamine molecules is studied by DFT calculations. Lattice water molecules and chlorides form various hydrogen bonds to take part in the self-assembly processes.     

Poly[[aqua­copper(II)]‐μ‐adamantane‐1,3‐diacetato]

In the title compound, [Cu(C₁₄H₁₈O₄)(H₂O)]_n, each Cu^II atom bonds to four O atoms of four adamantanediacetate (ada) ligands in equatorial positions and an O atom from a water mol­ecule in the apical position. Two adjacent Cu^II atoms form a paddle‐wheel unit with four ada ligands. The distance between the two Cu atoms is 2.5977 (3) Å. A crystallographic inversion center is located at the center of the Cu–Cu core. Each Cu₂(ada)₄ paddle‐wheel further bonds to four adjacent identical paddle‐wheel units, generating a two‐dimensional layered structure of Cu(ada)(H₂O) with a 4⁴ topology.